Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067110 | KEH41328.1 | 86.066 | 244 | 34 | 0 | 1 | 244 | 1 | 244 | 6.49e-150 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067110 | sp|Q9M1K1|ORG2_ARATH | 39.442 | 251 | 137 | 6 | 1 | 240 | 1 | 247 | 1.81e-48 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067110 | A0A072VIS7 | 86.066 | 244 | 34 | 0 | 1 | 244 | 1 | 244 | 3.10e-150 | 428 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0067110 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067110 | MtrunA17_Chr1g0170581 | 85.656 | 244 | 35 | 0 | 1 | 244 | 1 | 244 | 3.81e-153 | 426 |
| Msa0067110 | MtrunA17_Chr1g0170591 | 84.836 | 244 | 29 | 1 | 1 | 244 | 1 | 236 | 3.74e-150 | 418 |
| Msa0067110 | MtrunA17_Chr1g0170571 | 83.333 | 246 | 33 | 1 | 1 | 246 | 1 | 238 | 3.71e-140 | 392 |
| Msa0067110 | MtrunA17_Chr7g0256671 | 56.972 | 251 | 89 | 7 | 1 | 241 | 1 | 242 | 8.27e-62 | 194 |
| Msa0067110 | MtrunA17_Chr6g0474681 | 32.680 | 153 | 88 | 5 | 65 | 212 | 6 | 148 | 5.04e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067110 | AT3G56970.1 | 39.442 | 251 | 137 | 6 | 1 | 240 | 1 | 247 | 1.84e-49 | 163 |
| Msa0067110 | AT3G56980.1 | 38.462 | 273 | 118 | 6 | 1 | 242 | 1 | 254 | 2.05e-41 | 142 |
| Msa0067110 | AT2G41240.1 | 36.437 | 247 | 143 | 4 | 1 | 242 | 1 | 238 | 2.16e-40 | 139 |
| Msa0067110 | AT2G41240.2 | 36.032 | 247 | 143 | 5 | 1 | 242 | 1 | 237 | 7.00e-38 | 133 |
| Msa0067110 | AT5G04150.1 | 41.081 | 185 | 101 | 4 | 60 | 239 | 78 | 259 | 3.58e-32 | 119 |
| Msa0067110 | AT5G04150.2 | 42.945 | 163 | 88 | 2 | 60 | 219 | 78 | 238 | 3.61e-32 | 118 |
Find 40 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATGTTTCTGTATTTC+TGG | 0.048296 | 1_2:+31710184 | None:intergenic |
| TGATGCTGGTTATGGCTTAT+TGG | 0.196697 | 1_2:+31710685 | None:intergenic |
| AGTACCATTTGATCAGAAAT+AGG | 0.267145 | 1_2:+31710466 | None:intergenic |
| TGAGAAGCTGTTATCAATAA+TGG | 0.294727 | 1_2:-31709742 | Msa0067110:CDS |
| ATGGATTCTGATGCTGGTTA+TGG | 0.357369 | 1_2:+31710677 | None:intergenic |
| AGGACTCTTGAAATTGTTGC+TGG | 0.367920 | 1_2:+31710217 | None:intergenic |
| TCAATAGTGTCTTTGTAGAA+TGG | 0.399191 | 1_2:+31710658 | None:intergenic |
| TCTTCCTATTTCTGATCAAA+TGG | 0.404052 | 1_2:-31710470 | Msa0067110:intron |
| ATGGCTTATTGGCTCTTCAA+AGG | 0.435523 | 1_2:+31710696 | None:intergenic |
| ATTTCTTCATCTCAAACCTA+TGG | 0.440745 | 1_2:-31709923 | Msa0067110:CDS |
| TGTAGAATGGATTCTGATGC+TGG | 0.456368 | 1_2:+31710671 | None:intergenic |
| AAGAAATATTAAGCAGCAAA+AGG | 0.464396 | 1_2:+31709939 | None:intergenic |
| GCTGTTATCAATAATGGAAA+AGG | 0.470141 | 1_2:-31709736 | Msa0067110:CDS |
| TGGCTTATTGGCTCTTCAAA+GGG | 0.488560 | 1_2:+31710697 | None:intergenic |
| GCAGAAGACCCTCCCTCCAT+AGG | 0.512036 | 1_2:+31709907 | None:intergenic |
| ATATTAACTTCATTTACTTG+TGG | 0.516009 | 1_2:+31710118 | None:intergenic |
| CACATCAGGATCTTAGAAAG+TGG | 0.517114 | 1_2:+31709977 | None:intergenic |
| ACAAATTATTCATCTTCTTG+CGG | 0.523820 | 1_2:+31710512 | None:intergenic |
| TCTTCATCTCAAACCTATGG+AGG | 0.533541 | 1_2:-31709920 | Msa0067110:CDS |
| AAGAAACATAGTTACAACTC+TGG | 0.547575 | 1_2:-31710076 | Msa0067110:CDS |
| CAATAATGGAAAAGGAAGGA+GGG | 0.549179 | 1_2:-31709728 | Msa0067110:CDS |
| TCAATAATGGAAAAGGAAGG+AGG | 0.551798 | 1_2:-31709729 | Msa0067110:CDS |
| CATGCCAAGGTCACTGCTTG+TGG | 0.551876 | 1_2:+31710573 | None:intergenic |
| CATCCAATTGTTGAAAACAT+AGG | 0.558093 | 1_2:+31710721 | None:intergenic |
| CAATCCACAAGCAGTGACCT+TGG | 0.569748 | 1_2:-31710577 | Msa0067110:CDS |
| ATCTCAAACCTATGGAGGGA+GGG | 0.571867 | 1_2:-31709915 | Msa0067110:CDS |
| AGTGTAACATGAAATGTGAA+TGG | 0.579724 | 1_2:+31710012 | None:intergenic |
| CCAATTGTTGAAAACATAGG+AGG | 0.582074 | 1_2:+31710724 | None:intergenic |
| TCTTAGAAAGTGGAATCTTG+TGG | 0.583213 | 1_2:+31709987 | None:intergenic |
| CTTCATCTCAAACCTATGGA+GGG | 0.583617 | 1_2:-31709919 | Msa0067110:CDS |
| GTCACTGCTTGTGGATTGTG+AGG | 0.591686 | 1_2:+31710582 | None:intergenic |
| CACAAGCAGTGACCTTGGCA+TGG | 0.603384 | 1_2:-31710572 | Msa0067110:CDS |
| CAGAAATAGGAAGAAGTGAA+CGG | 0.605298 | 1_2:+31710479 | None:intergenic |
| CATCTCAAACCTATGGAGGG+AGG | 0.626178 | 1_2:-31709916 | Msa0067110:CDS |
| GAAATACAGAAACATGTGGA+AGG | 0.627895 | 1_2:-31710181 | Msa0067110:CDS |
| TTATCAATAATGGAAAAGGA+AGG | 0.643476 | 1_2:-31709732 | Msa0067110:CDS |
| ACCAGAAATACAGAAACATG+TGG | 0.649518 | 1_2:-31710185 | Msa0067110:CDS |
| CTGATGTGTTTAGAAAATGA+TGG | 0.652952 | 1_2:-31709962 | Msa0067110:CDS |
| CAAGCTTCTTGACCATGCCA+AGG | 0.656633 | 1_2:+31710560 | None:intergenic |
| TCACTGCTTGTGGATTGTGA+GGG | 0.698792 | 1_2:+31710583 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAGTAATATCGAAAAA+CGG | + | chr1_2:31710136-31710155 | None:intergenic | 15.0% |
| !!! | TTTAAAGTAATATCGAAAAA+CGG | + | chr1_2:31710136-31710155 | None:intergenic | 15.0% |
| !! | TTCGATATTACTTTAAATTG+TGG | - | chr1_2:31710139-31710158 | Msa0067110:CDS | 20.0% |
| !! | ATATTAACTTCATTTACTTG+TGG | + | chr1_2:31710337-31710356 | None:intergenic | 20.0% |
| !! | TTCGATATTACTTTAAATTG+TGG | - | chr1_2:31710139-31710158 | Msa0067110:CDS | 20.0% |
| !! | ATATTAACTTCATTTACTTG+TGG | + | chr1_2:31710337-31710356 | None:intergenic | 20.0% |
| ! | ACAAATTATTCATCTTCTTG+CGG | + | chr1_2:31709943-31709962 | None:intergenic | 25.0% |
| ! | ACAATTAGAAACAGAAAGAA+GGG | + | chr1_2:31710020-31710039 | None:intergenic | 25.0% |
| !!! | GTATTTCTGGTATGTATTTT+AGG | + | chr1_2:31710258-31710277 | None:intergenic | 25.0% |
| ! | AAGAAATATTAAGCAGCAAA+AGG | + | chr1_2:31710516-31710535 | None:intergenic | 25.0% |
| !! | ATTCAACTAAAAGCTTCTTT+TGG | - | chr1_2:31710638-31710657 | Msa0067110:CDS | 25.0% |
| !! | TTCAACTAAAAGCTTCTTTT+GGG | - | chr1_2:31710639-31710658 | Msa0067110:CDS | 25.0% |
| !! | TTATCAATAATGGAAAAGGA+AGG | - | chr1_2:31710720-31710739 | Msa0067110:CDS | 25.0% |
| ! | ACAAATTATTCATCTTCTTG+CGG | + | chr1_2:31709943-31709962 | None:intergenic | 25.0% |
| ! | ACAATTAGAAACAGAAAGAA+GGG | + | chr1_2:31710020-31710039 | None:intergenic | 25.0% |
| !!! | GTATTTCTGGTATGTATTTT+AGG | + | chr1_2:31710258-31710277 | None:intergenic | 25.0% |
| ! | AAGAAATATTAAGCAGCAAA+AGG | + | chr1_2:31710516-31710535 | None:intergenic | 25.0% |
| !! | ATTCAACTAAAAGCTTCTTT+TGG | - | chr1_2:31710638-31710657 | Msa0067110:CDS | 25.0% |
| !! | TTCAACTAAAAGCTTCTTTT+GGG | - | chr1_2:31710639-31710658 | Msa0067110:CDS | 25.0% |
| !! | TTATCAATAATGGAAAAGGA+AGG | - | chr1_2:31710720-31710739 | Msa0067110:CDS | 25.0% |
| CATCCAATTGTTGAAAACAT+AGG | + | chr1_2:31709734-31709753 | None:intergenic | 30.0% | |
| ! | CTATGTTTTCAACAATTGGA+TGG | - | chr1_2:31709732-31709751 | Msa0067110:CDS | 30.0% |
| TCAATAGTGTCTTTGTAGAA+TGG | + | chr1_2:31709797-31709816 | None:intergenic | 30.0% | |
| !! | TCATTTTGATGATCAAGTAG+AGG | - | chr1_2:31709826-31709845 | Msa0067110:intron | 30.0% |
| !! | TCTTCCTATTTCTGATCAAA+TGG | - | chr1_2:31709982-31710001 | Msa0067110:CDS | 30.0% |
| AGTACCATTTGATCAGAAAT+AGG | + | chr1_2:31709989-31710008 | None:intergenic | 30.0% | |
| GACAATTAGAAACAGAAAGA+AGG | + | chr1_2:31710021-31710040 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTTTGACATGAGTA+TGG | - | chr1_2:31710088-31710107 | Msa0067110:CDS | 30.0% |
| TATGGTTGCAATTTCCTAAT+TGG | - | chr1_2:31710106-31710125 | Msa0067110:CDS | 30.0% | |
| ATGGTTGCAATTTCCTAATT+GGG | - | chr1_2:31710107-31710126 | Msa0067110:CDS | 30.0% | |
| AAGAAACATAGTTACAACTC+TGG | - | chr1_2:31710376-31710395 | Msa0067110:intron | 30.0% | |
| ! | GTTTTGTAGTTTCAACAAGT+AGG | - | chr1_2:31710398-31710417 | Msa0067110:intron | 30.0% |
| AGTGTAACATGAAATGTGAA+TGG | + | chr1_2:31710443-31710462 | None:intergenic | 30.0% | |
| ! | CATCATTTTCTAAACACATC+AGG | + | chr1_2:31710492-31710511 | None:intergenic | 30.0% |
| CTGATGTGTTTAGAAAATGA+TGG | - | chr1_2:31710490-31710509 | Msa0067110:CDS | 30.0% | |
| ATTTCTTCATCTCAAACCTA+TGG | - | chr1_2:31710529-31710548 | Msa0067110:CDS | 30.0% | |
| TGAGAAGCTGTTATCAATAA+TGG | - | chr1_2:31710710-31710729 | Msa0067110:CDS | 30.0% | |
| ! | GCTGTTATCAATAATGGAAA+AGG | - | chr1_2:31710716-31710735 | Msa0067110:CDS | 30.0% |
| CATCCAATTGTTGAAAACAT+AGG | + | chr1_2:31709734-31709753 | None:intergenic | 30.0% | |
| ! | CTATGTTTTCAACAATTGGA+TGG | - | chr1_2:31709732-31709751 | Msa0067110:CDS | 30.0% |
| TCAATAGTGTCTTTGTAGAA+TGG | + | chr1_2:31709797-31709816 | None:intergenic | 30.0% | |
| !! | TCATTTTGATGATCAAGTAG+AGG | - | chr1_2:31709826-31709845 | Msa0067110:intron | 30.0% |
| !! | TCTTCCTATTTCTGATCAAA+TGG | - | chr1_2:31709982-31710001 | Msa0067110:CDS | 30.0% |
| AGTACCATTTGATCAGAAAT+AGG | + | chr1_2:31709989-31710008 | None:intergenic | 30.0% | |
| GACAATTAGAAACAGAAAGA+AGG | + | chr1_2:31710021-31710040 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTTTGACATGAGTA+TGG | - | chr1_2:31710088-31710107 | Msa0067110:CDS | 30.0% |
| TATGGTTGCAATTTCCTAAT+TGG | - | chr1_2:31710106-31710125 | Msa0067110:CDS | 30.0% | |
| ATGGTTGCAATTTCCTAATT+GGG | - | chr1_2:31710107-31710126 | Msa0067110:CDS | 30.0% | |
| AAGAAACATAGTTACAACTC+TGG | - | chr1_2:31710376-31710395 | Msa0067110:intron | 30.0% | |
| ! | GTTTTGTAGTTTCAACAAGT+AGG | - | chr1_2:31710398-31710417 | Msa0067110:intron | 30.0% |
| AGTGTAACATGAAATGTGAA+TGG | + | chr1_2:31710443-31710462 | None:intergenic | 30.0% | |
| ! | CATCATTTTCTAAACACATC+AGG | + | chr1_2:31710492-31710511 | None:intergenic | 30.0% |
| CTGATGTGTTTAGAAAATGA+TGG | - | chr1_2:31710490-31710509 | Msa0067110:CDS | 30.0% | |
| ATTTCTTCATCTCAAACCTA+TGG | - | chr1_2:31710529-31710548 | Msa0067110:CDS | 30.0% | |
| TGAGAAGCTGTTATCAATAA+TGG | - | chr1_2:31710710-31710729 | Msa0067110:CDS | 30.0% | |
| ! | GCTGTTATCAATAATGGAAA+AGG | - | chr1_2:31710716-31710735 | Msa0067110:CDS | 30.0% |
| CCAATTGTTGAAAACATAGG+AGG | + | chr1_2:31709731-31709750 | None:intergenic | 35.0% | |
| ! | CCTCCTATGTTTTCAACAAT+TGG | - | chr1_2:31709728-31709747 | Msa0067110:CDS | 35.0% |
| CAGAAATAGGAAGAAGTGAA+CGG | + | chr1_2:31709976-31709995 | None:intergenic | 35.0% | |
| ACCAGAAATACAGAAACATG+TGG | - | chr1_2:31710267-31710286 | Msa0067110:intron | 35.0% | |
| ! | TCCACATGTTTCTGTATTTC+TGG | + | chr1_2:31710271-31710290 | None:intergenic | 35.0% |
| GAAATACAGAAACATGTGGA+AGG | - | chr1_2:31710271-31710290 | Msa0067110:intron | 35.0% | |
| TCTTAGAAAGTGGAATCTTG+TGG | + | chr1_2:31710468-31710487 | None:intergenic | 35.0% | |
| ! | TCAATAATGGAAAAGGAAGG+AGG | - | chr1_2:31710723-31710742 | Msa0067110:CDS | 35.0% |
| ! | CAATAATGGAAAAGGAAGGA+GGG | - | chr1_2:31710724-31710743 | Msa0067110:CDS | 35.0% |
| CCAATTGTTGAAAACATAGG+AGG | + | chr1_2:31709731-31709750 | None:intergenic | 35.0% | |
| ! | CCTCCTATGTTTTCAACAAT+TGG | - | chr1_2:31709728-31709747 | Msa0067110:CDS | 35.0% |
| CAGAAATAGGAAGAAGTGAA+CGG | + | chr1_2:31709976-31709995 | None:intergenic | 35.0% | |
| ACCAGAAATACAGAAACATG+TGG | - | chr1_2:31710267-31710286 | Msa0067110:intron | 35.0% | |
| ! | TCCACATGTTTCTGTATTTC+TGG | + | chr1_2:31710271-31710290 | None:intergenic | 35.0% |
| GAAATACAGAAACATGTGGA+AGG | - | chr1_2:31710271-31710290 | Msa0067110:intron | 35.0% | |
| TCTTAGAAAGTGGAATCTTG+TGG | + | chr1_2:31710468-31710487 | None:intergenic | 35.0% | |
| ! | TCAATAATGGAAAAGGAAGG+AGG | - | chr1_2:31710723-31710742 | Msa0067110:CDS | 35.0% |
| ! | CAATAATGGAAAAGGAAGGA+GGG | - | chr1_2:31710724-31710743 | Msa0067110:CDS | 35.0% |
| !! | TGGCTTATTGGCTCTTCAAA+GGG | + | chr1_2:31709758-31709777 | None:intergenic | 40.0% |
| !! | ATGGCTTATTGGCTCTTCAA+AGG | + | chr1_2:31709759-31709778 | None:intergenic | 40.0% |
| ! | TGATGCTGGTTATGGCTTAT+TGG | + | chr1_2:31709770-31709789 | None:intergenic | 40.0% |
| ! | ATGGATTCTGATGCTGGTTA+TGG | + | chr1_2:31709778-31709797 | None:intergenic | 40.0% |
| ! | TGTAGAATGGATTCTGATGC+TGG | + | chr1_2:31709784-31709803 | None:intergenic | 40.0% |
| AGGACTCTTGAAATTGTTGC+TGG | + | chr1_2:31710238-31710257 | None:intergenic | 40.0% | |
| CACATCAGGATCTTAGAAAG+TGG | + | chr1_2:31710478-31710497 | None:intergenic | 40.0% | |
| TCTTCATCTCAAACCTATGG+AGG | - | chr1_2:31710532-31710551 | Msa0067110:CDS | 40.0% | |
| CTTCATCTCAAACCTATGGA+GGG | - | chr1_2:31710533-31710552 | Msa0067110:CDS | 40.0% | |
| ! | CTTCTGCAATTCGCATTTTC+AGG | - | chr1_2:31710561-31710580 | Msa0067110:CDS | 40.0% |
| !! | TGGCTTATTGGCTCTTCAAA+GGG | + | chr1_2:31709758-31709777 | None:intergenic | 40.0% |
| !! | ATGGCTTATTGGCTCTTCAA+AGG | + | chr1_2:31709759-31709778 | None:intergenic | 40.0% |
| ! | TGATGCTGGTTATGGCTTAT+TGG | + | chr1_2:31709770-31709789 | None:intergenic | 40.0% |
| ! | ATGGATTCTGATGCTGGTTA+TGG | + | chr1_2:31709778-31709797 | None:intergenic | 40.0% |
| ! | TGTAGAATGGATTCTGATGC+TGG | + | chr1_2:31709784-31709803 | None:intergenic | 40.0% |
| AGGACTCTTGAAATTGTTGC+TGG | + | chr1_2:31710238-31710257 | None:intergenic | 40.0% | |
| CACATCAGGATCTTAGAAAG+TGG | + | chr1_2:31710478-31710497 | None:intergenic | 40.0% | |
| TCTTCATCTCAAACCTATGG+AGG | - | chr1_2:31710532-31710551 | Msa0067110:CDS | 40.0% | |
| CTTCATCTCAAACCTATGGA+GGG | - | chr1_2:31710533-31710552 | Msa0067110:CDS | 40.0% | |
| ! | CTTCTGCAATTCGCATTTTC+AGG | - | chr1_2:31710561-31710580 | Msa0067110:CDS | 40.0% |
| ! | TCACTGCTTGTGGATTGTGA+GGG | + | chr1_2:31709872-31709891 | None:intergenic | 45.0% |
| CGAAAAACGGCATCCCAATT+AGG | + | chr1_2:31710123-31710142 | None:intergenic | 45.0% | |
| ATCTCAAACCTATGGAGGGA+GGG | - | chr1_2:31710537-31710556 | Msa0067110:CDS | 45.0% | |
| !!! | GCTTCTTTTGGGTTTTCTGC+AGG | - | chr1_2:31710650-31710669 | Msa0067110:CDS | 45.0% |
| !!! | TCTTTTGGGTTTTCTGCAGG+TGG | - | chr1_2:31710653-31710672 | Msa0067110:CDS | 45.0% |
| ! | TCACTGCTTGTGGATTGTGA+GGG | + | chr1_2:31709872-31709891 | None:intergenic | 45.0% |
| CGAAAAACGGCATCCCAATT+AGG | + | chr1_2:31710123-31710142 | None:intergenic | 45.0% | |
| ATCTCAAACCTATGGAGGGA+GGG | - | chr1_2:31710537-31710556 | Msa0067110:CDS | 45.0% | |
| !!! | GCTTCTTTTGGGTTTTCTGC+AGG | - | chr1_2:31710650-31710669 | Msa0067110:CDS | 45.0% |
| !!! | TCTTTTGGGTTTTCTGCAGG+TGG | - | chr1_2:31710653-31710672 | Msa0067110:CDS | 45.0% |
| ! | GTCACTGCTTGTGGATTGTG+AGG | + | chr1_2:31709873-31709892 | None:intergenic | 50.0% |
| CAATCCACAAGCAGTGACCT+TGG | - | chr1_2:31709875-31709894 | Msa0067110:intron | 50.0% | |
| CAAGCTTCTTGACCATGCCA+AGG | + | chr1_2:31709895-31709914 | None:intergenic | 50.0% | |
| CATCTCAAACCTATGGAGGG+AGG | - | chr1_2:31710536-31710555 | Msa0067110:CDS | 50.0% | |
| ! | GTCACTGCTTGTGGATTGTG+AGG | + | chr1_2:31709873-31709892 | None:intergenic | 50.0% |
| CAATCCACAAGCAGTGACCT+TGG | - | chr1_2:31709875-31709894 | Msa0067110:intron | 50.0% | |
| CAAGCTTCTTGACCATGCCA+AGG | + | chr1_2:31709895-31709914 | None:intergenic | 50.0% | |
| CATCTCAAACCTATGGAGGG+AGG | - | chr1_2:31710536-31710555 | Msa0067110:CDS | 50.0% | |
| CATGCCAAGGTCACTGCTTG+TGG | + | chr1_2:31709882-31709901 | None:intergenic | 55.0% | |
| CACAAGCAGTGACCTTGGCA+TGG | - | chr1_2:31709880-31709899 | Msa0067110:intron | 55.0% | |
| CATGCCAAGGTCACTGCTTG+TGG | + | chr1_2:31709882-31709901 | None:intergenic | 55.0% | |
| CACAAGCAGTGACCTTGGCA+TGG | - | chr1_2:31709880-31709899 | Msa0067110:intron | 55.0% | |
| GCAGAAGACCCTCCCTCCAT+AGG | + | chr1_2:31710548-31710567 | None:intergenic | 60.0% | |
| GCAGAAGACCCTCCCTCCAT+AGG | + | chr1_2:31710548-31710567 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 31709713 | 31710761 | 31709713 | ID=Msa0067110;Name=Msa0067110 |
| chr1_2 | mRNA | 31709713 | 31710761 | 31709713 | ID=Msa0067110-mRNA-1;Parent=Msa0067110;Name=Msa0067110-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|247 |
| chr1_2 | exon | 31710471 | 31710761 | 31710471 | ID=Msa0067110-mRNA-1:exon:10450;Parent=Msa0067110-mRNA-1 |
| chr1_2 | exon | 31709892 | 31710254 | 31709892 | ID=Msa0067110-mRNA-1:exon:10449;Parent=Msa0067110-mRNA-1 |
| chr1_2 | exon | 31709713 | 31709802 | 31709713 | ID=Msa0067110-mRNA-1:exon:10448;Parent=Msa0067110-mRNA-1 |
| chr1_2 | CDS | 31710471 | 31710761 | 31710471 | ID=Msa0067110-mRNA-1:cds;Parent=Msa0067110-mRNA-1 |
| chr1_2 | CDS | 31709892 | 31710254 | 31709892 | ID=Msa0067110-mRNA-1:cds;Parent=Msa0067110-mRNA-1 |
| chr1_2 | CDS | 31709713 | 31709802 | 31709713 | ID=Msa0067110-mRNA-1:cds;Parent=Msa0067110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
