Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067770 | KEH40808.1 | 80.651 | 522 | 44 | 2 | 1 | 522 | 1 | 465 | 0.0 | 829 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067770 | sp|Q8L3W1|VRN1_ARATH | 25.225 | 333 | 184 | 9 | 7 | 277 | 4 | 333 | 1.40e-20 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067770 | A0A072VHA4 | 80.651 | 522 | 44 | 2 | 1 | 522 | 1 | 465 | 0.0 | 829 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0067770 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067770 | MtrunA17_Chr1g0163251 | 83.452 | 423 | 38 | 1 | 1 | 423 | 1 | 391 | 0.0 | 709 |
| Msa0067770 | MtrunA17_Chr1g0163181 | 55.588 | 340 | 123 | 5 | 1 | 320 | 1 | 332 | 1.61e-124 | 371 |
| Msa0067770 | MtrunA17_Chr1g0163181 | 53.793 | 145 | 60 | 3 | 379 | 522 | 292 | 430 | 1.76e-39 | 149 |
| Msa0067770 | MtrunA17_Chr1g0163201 | 55.363 | 289 | 100 | 3 | 20 | 290 | 18 | 295 | 3.58e-100 | 308 |
| Msa0067770 | MtrunA17_Chr1g0163201 | 68.041 | 97 | 31 | 0 | 426 | 522 | 297 | 393 | 6.34e-35 | 135 |
| Msa0067770 | MtrunA17_Chr1g0163261 | 50.836 | 299 | 134 | 3 | 1 | 291 | 1 | 294 | 1.40e-94 | 290 |
| Msa0067770 | MtrunA17_Chr1g0163231 | 51.724 | 290 | 121 | 8 | 1 | 281 | 1 | 280 | 1.56e-90 | 279 |
| Msa0067770 | MtrunA17_Chr1g0171611 | 53.287 | 289 | 106 | 7 | 1 | 281 | 1 | 268 | 7.66e-90 | 277 |
| Msa0067770 | MtrunA17_Chr1g0163241 | 67.081 | 161 | 43 | 4 | 1 | 156 | 7 | 162 | 3.58e-61 | 198 |
| Msa0067770 | MtrunA17_Chr1g0163191 | 63.924 | 158 | 43 | 1 | 1 | 144 | 1 | 158 | 1.53e-60 | 196 |
| Msa0067770 | MtrunA17_Chr1g0163091 | 50.769 | 130 | 64 | 0 | 164 | 293 | 3 | 132 | 5.94e-39 | 139 |
| Msa0067770 | MtrunA17_Chr1g0162151 | 50.769 | 130 | 64 | 0 | 164 | 293 | 3 | 132 | 1.28e-35 | 132 |
| Msa0067770 | MtrunA17_Chr1g0163151 | 59.794 | 97 | 39 | 0 | 426 | 522 | 126 | 222 | 1.16e-33 | 127 |
| Msa0067770 | MtrunA17_Chr1g0163151 | 44.444 | 144 | 72 | 2 | 163 | 306 | 2 | 137 | 5.98e-33 | 125 |
| Msa0067770 | MtrunA17_Chr1g0163111 | 40.523 | 153 | 82 | 1 | 179 | 331 | 10 | 153 | 6.09e-33 | 125 |
| Msa0067770 | MtrunA17_Chr1g0163111 | 48.000 | 125 | 48 | 3 | 399 | 522 | 121 | 229 | 2.37e-26 | 107 |
| Msa0067770 | MtrunA17_Chr7g0233561 | 31.457 | 302 | 166 | 11 | 9 | 278 | 18 | 310 | 1.05e-31 | 124 |
| Msa0067770 | MtrunA17_Chr1g0163131 | 30.847 | 295 | 166 | 11 | 14 | 282 | 27 | 309 | 3.66e-31 | 122 |
| Msa0067770 | MtrunA17_Chr1g0163131 | 38.849 | 139 | 77 | 4 | 389 | 521 | 170 | 306 | 5.88e-16 | 79.0 |
| Msa0067770 | MtrunA17_Chr3g0103181 | 29.818 | 275 | 180 | 6 | 9 | 278 | 12 | 278 | 4.77e-30 | 119 |
| Msa0067770 | MtrunA17_Chr8g0390841 | 30.303 | 297 | 174 | 9 | 9 | 278 | 39 | 329 | 1.83e-29 | 121 |
| Msa0067770 | MtrunA17_Chr3g0103171 | 28.464 | 267 | 176 | 6 | 20 | 278 | 5 | 264 | 6.79e-29 | 115 |
| Msa0067770 | MtrunA17_Chr1g0163101 | 43.972 | 141 | 67 | 4 | 14 | 146 | 26 | 162 | 1.70e-28 | 111 |
| Msa0067770 | MtrunA17_Chr7g0233521 | 32.014 | 278 | 167 | 9 | 21 | 286 | 2 | 269 | 8.77e-28 | 112 |
| Msa0067770 | MtrunA17_Chr1g0163221 | 28.383 | 303 | 177 | 13 | 9 | 285 | 11 | 299 | 2.82e-26 | 110 |
| Msa0067770 | MtrunA17_Chr1g0162161 | 39.726 | 146 | 78 | 4 | 21 | 159 | 4 | 146 | 3.54e-26 | 104 |
| Msa0067770 | MtrunA17_Chr1g0163071 | 26.974 | 304 | 184 | 8 | 21 | 292 | 2 | 299 | 3.69e-26 | 108 |
| Msa0067770 | MtrunA17_Chr1g0208771 | 28.479 | 309 | 179 | 11 | 20 | 298 | 12 | 308 | 7.81e-26 | 110 |
| Msa0067770 | MtrunA17_Chr6g0476181 | 45.070 | 142 | 69 | 4 | 21 | 159 | 2 | 137 | 9.13e-26 | 103 |
| Msa0067770 | MtrunA17_Chr3g0131891 | 30.508 | 295 | 172 | 9 | 9 | 280 | 19 | 303 | 1.46e-25 | 107 |
| Msa0067770 | MtrunA17_Chr6g0476171 | 42.000 | 150 | 77 | 5 | 164 | 306 | 12 | 158 | 1.91e-25 | 105 |
| Msa0067770 | MtrunA17_Chr6g0476171 | 49.180 | 61 | 31 | 0 | 461 | 521 | 185 | 245 | 5.11e-11 | 63.2 |
| Msa0067770 | MtrunA17_Chr4g0067431 | 28.819 | 288 | 174 | 10 | 9 | 268 | 15 | 299 | 2.58e-25 | 106 |
| Msa0067770 | MtrunA17_Chr7g0233541 | 29.066 | 289 | 178 | 7 | 21 | 286 | 2 | 286 | 4.03e-25 | 105 |
| Msa0067770 | MtrunA17_Chr1g0163121 | 39.568 | 139 | 77 | 3 | 19 | 157 | 9 | 140 | 1.21e-24 | 99.8 |
| Msa0067770 | MtrunA17_Chr3g0103191 | 30.488 | 246 | 149 | 7 | 9 | 240 | 12 | 249 | 1.89e-23 | 99.4 |
| Msa0067770 | MtrunA17_Chr1g0163081 | 49.438 | 89 | 44 | 1 | 21 | 109 | 6 | 93 | 4.46e-23 | 95.5 |
| Msa0067770 | MtrunA17_Chr3g0103151 | 41.463 | 123 | 67 | 3 | 9 | 126 | 12 | 134 | 2.30e-22 | 94.0 |
| Msa0067770 | MtrunA17_Chr7g0233531 | 29.391 | 279 | 173 | 8 | 21 | 286 | 2 | 269 | 1.27e-21 | 95.1 |
| Msa0067770 | MtrunA17_Chr1g0163141 | 37.500 | 152 | 83 | 3 | 17 | 160 | 7 | 154 | 1.95e-21 | 92.0 |
| Msa0067770 | MtrunA17_Chr5g0419201 | 35.526 | 152 | 82 | 4 | 9 | 144 | 16 | 167 | 2.10e-21 | 92.0 |
| Msa0067770 | MtrunA17_Chr7g0233571 | 34.239 | 184 | 107 | 5 | 1 | 177 | 1 | 177 | 2.23e-20 | 90.1 |
| Msa0067770 | MtrunA17_Chr1g0163161 | 38.346 | 133 | 70 | 4 | 33 | 157 | 1 | 129 | 2.24e-18 | 81.6 |
| Msa0067770 | MtrunA17_Chr6g0467351 | 28.293 | 205 | 130 | 5 | 13 | 201 | 23 | 226 | 9.55e-18 | 82.4 |
| Msa0067770 | MtrunA17_Chr4g0033961 | 36.634 | 101 | 58 | 2 | 7 | 101 | 4 | 104 | 1.11e-12 | 70.1 |
| Msa0067770 | MtrunA17_Chr5g0419211 | 34.021 | 97 | 63 | 1 | 199 | 294 | 8 | 104 | 3.51e-12 | 63.2 |
| Msa0067770 | MtrunA17_Chr1g0154131 | 26.071 | 280 | 189 | 10 | 3 | 266 | 179 | 456 | 2.43e-11 | 65.9 |
| Msa0067770 | MtrunA17_Chr1g0163061 | 35.000 | 100 | 58 | 3 | 9 | 101 | 15 | 114 | 7.44e-11 | 63.2 |
| Msa0067770 | MtrunA17_Chr5g0429931 | 24.723 | 271 | 160 | 8 | 20 | 282 | 10 | 244 | 9.44e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067770 | AT3G18990.2 | 25.225 | 333 | 184 | 9 | 7 | 277 | 4 | 333 | 1.18e-21 | 97.1 |
| Msa0067770 | AT3G18990.1 | 25.225 | 333 | 184 | 9 | 7 | 277 | 4 | 333 | 1.42e-21 | 96.3 |
Find 94 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTTCAACAAGAAATATTT+TGG | 0.149501 | 1_2:-33016386 | Msa0067770:CDS |
| TAAAGGTTGGATAAAATTTA+TGG | 0.171908 | 1_2:-33012501 | Msa0067770:CDS |
| TATTTCAAGGTTAAGATATT+TGG | 0.184615 | 1_2:-33016261 | Msa0067770:CDS |
| TTTGGAAATTTAAGAAATAT+TGG | 0.199105 | 1_2:+33016411 | None:intergenic |
| AAAGAAGGGATTCTCATTAT+TGG | 0.209323 | 1_2:+33015831 | None:intergenic |
| CCATGGGAAGCATGCTCTTT+TGG | 0.216932 | 1_2:+33014185 | None:intergenic |
| TTTGCAAAGTCTCTCAAATA+TGG | 0.220809 | 1_2:-33016318 | Msa0067770:CDS |
| CCTTGAAGAGCTTGCACTTT+TGG | 0.221116 | 1_2:+33014873 | None:intergenic |
| CCCTGAAGAGCATGCACTTT+TGG | 0.222036 | 1_2:+33014683 | None:intergenic |
| TCCAAAAGTGCATGCTCTTC+AGG | 0.235087 | 1_2:-33014684 | Msa0067770:CDS |
| CTTAGGGTTTGGTCCCTTGA+TGG | 0.254887 | 1_2:+33015438 | None:intergenic |
| GCATGCACCAAAGAGATTTA+TGG | 0.255225 | 1_2:-33012624 | Msa0067770:CDS |
| ACACAATACATTCAAGGTTT+TGG | 0.281549 | 1_2:-33012763 | Msa0067770:CDS |
| AGAAATATGTGGAGAAATAT+TGG | 0.283749 | 1_2:-33016449 | Msa0067770:CDS |
| CCTCTTTCCATAAATCTCTT+TGG | 0.284821 | 1_2:+33012617 | None:intergenic |
| CAATATTATCTTATGAAAAT+CGG | 0.286878 | 1_2:+33016603 | None:intergenic |
| GAAGAAAGCAAAGTGGAAAT+TGG | 0.294808 | 1_2:-33012479 | Msa0067770:CDS |
| TGGAGAATAATGGTGATATT+TGG | 0.299993 | 1_2:-33016362 | Msa0067770:CDS |
| ATATTTCTCCACATATTTCT+TGG | 0.307927 | 1_2:+33016452 | None:intergenic |
| ATTTCTTGTTGAACACCATT+TGG | 0.331479 | 1_2:+33016393 | None:intergenic |
| TTGGAAATTTAAGAAATATT+GGG | 0.332062 | 1_2:+33016412 | None:intergenic |
| CCTTGCAACTTCTTAGGGTT+TGG | 0.347894 | 1_2:+33015427 | None:intergenic |
| GTTATCATTTGAGCTTCCTT+TGG | 0.355140 | 1_2:+33016129 | None:intergenic |
| TATAAAGAAGGGATCTCTTC+TGG | 0.374152 | 1_2:-33015297 | Msa0067770:CDS |
| TATTTCTCCACATATTTCTT+GGG | 0.381095 | 1_2:+33016453 | None:intergenic |
| AATTAACCCTACCGGGTGTT+TGG | 0.385019 | 1_2:+33012734 | None:intergenic |
| TATAAAGAAGGGATCTCTTA+TGG | 0.386855 | 1_2:-33014948 | Msa0067770:CDS |
| CCAAAAGTGCAAGCTCTTCA+AGG | 0.388417 | 1_2:-33014873 | Msa0067770:intron |
| AATATTATCTTATGAAAATC+GGG | 0.396040 | 1_2:+33016604 | None:intergenic |
| GAAGCTCAAATGATAACAAA+TGG | 0.398449 | 1_2:-33016123 | Msa0067770:CDS |
| TGTCATTAAAACTTCAAAGA+AGG | 0.419675 | 1_2:+33015816 | None:intergenic |
| AAAATTGTGGAGTTGAAAAT+GGG | 0.422112 | 1_2:-33012584 | Msa0067770:CDS |
| GTGTTTAAAGTTTCCATTGT+GGG | 0.433176 | 1_2:-33012416 | Msa0067770:CDS |
| GATGAAACACAATACATTCA+AGG | 0.445828 | 1_2:-33012769 | Msa0067770:CDS |
| CCAAAAGTGCATGCTCTTCA+GGG | 0.454566 | 1_2:-33014683 | Msa0067770:intron |
| TATTGGTGGATCATATTTCA+AGG | 0.456312 | 1_2:-33016274 | Msa0067770:CDS |
| CGTGGTTGTCAGTTCAGTAA+AGG | 0.468915 | 1_2:-33012518 | Msa0067770:CDS |
| CCATGACAAGGTTATAAAGA+AGG | 0.469658 | 1_2:-33014960 | Msa0067770:intron |
| AACTGACAACCACGAATACT+AGG | 0.474382 | 1_2:+33012527 | None:intergenic |
| ATTTATTATCCTAGTATTCG+TGG | 0.474870 | 1_2:-33012536 | Msa0067770:CDS |
| TCTTCTAATTCTATGACTAC+TGG | 0.476068 | 1_2:-33015565 | Msa0067770:CDS |
| TACTATTACTAAAGCCATCA+AGG | 0.479367 | 1_2:-33015452 | Msa0067770:CDS |
| GTCATTAAAACTTCAAAGAA+GGG | 0.479979 | 1_2:+33015817 | None:intergenic |
| TTACGCCCATGGTCATATCT+TGG | 0.485636 | 1_2:-33015788 | Msa0067770:intron |
| GAGACACTGGAGAAACTTGT+AGG | 0.490241 | 1_2:-33015251 | Msa0067770:CDS |
| CCATGACAAGGTTATAAAGA+AGG | 0.491612 | 1_2:-33014770 | Msa0067770:intron |
| CCATGAGAAGGTTATAAAGA+AGG | 0.491612 | 1_2:-33015309 | Msa0067770:intron |
| ATATTTCTTAAATTTCCAAA+TGG | 0.500935 | 1_2:-33016408 | Msa0067770:CDS |
| AAGACGCTGGAGAAACTTGT+AGG | 0.502167 | 1_2:-33014902 | Msa0067770:CDS |
| CATGACAAGGTTATAAAGAA+GGG | 0.502514 | 1_2:-33014959 | Msa0067770:intron |
| ATAGTAATAGTGAATAAAAG+TGG | 0.509655 | 1_2:+33015469 | None:intergenic |
| CCATGACAAGGTTATAAAGA+AGG | 0.510696 | 1_2:-33014272 | Msa0067770:intron |
| CCAAAGAGATTTATGGAAAG+AGG | 0.511759 | 1_2:-33012617 | Msa0067770:CDS |
| TATGATCTTGAAAAGTTGCA+TGG | 0.513402 | 1_2:+33015673 | None:intergenic |
| AAGCTCAAATGATAACAAAT+GGG | 0.514121 | 1_2:-33016122 | Msa0067770:CDS |
| AAGACATTGGAGAAACTTGT+AGG | 0.516345 | 1_2:-33014712 | Msa0067770:CDS |
| AAGACATTGGAGAAACATCT+AGG | 0.517707 | 1_2:-33014214 | Msa0067770:CDS |
| TCATACTTGAACAAATTTGA+AGG | 0.519341 | 1_2:-33015655 | Msa0067770:CDS |
| CATACTTGAACAAATTTGAA+GGG | 0.523429 | 1_2:-33015654 | Msa0067770:CDS |
| GGGATTGCAAGCTTAAGAGT+TGG | 0.529065 | 1_2:-33015634 | Msa0067770:CDS |
| ATGATCATGATATTCTAAAG+AGG | 0.534079 | 1_2:-33014736 | Msa0067770:CDS |
| CATGAGAAGGTTATAAAGAA+GGG | 0.535802 | 1_2:-33015308 | Msa0067770:intron |
| ATTCTAAAGAGGAGAGACAC+TGG | 0.536518 | 1_2:-33015264 | Msa0067770:CDS |
| GTTGTCAGTTCAGTAAAGGT+TGG | 0.536590 | 1_2:-33012514 | Msa0067770:CDS |
| TGCAAGCTTAAGAGTTGGAG+AGG | 0.542791 | 1_2:-33015629 | Msa0067770:CDS |
| ATTCTAAAGAGGAAAGACAT+TGG | 0.551775 | 1_2:-33014725 | Msa0067770:CDS |
| CATGACAAGGTTATAAAGAA+GGG | 0.554767 | 1_2:-33014769 | Msa0067770:intron |
| CTAATTCTATGACTACTGGT+TGG | 0.561386 | 1_2:-33015561 | Msa0067770:CDS |
| GAGAATTCCCAAGAAATATG+TGG | 0.561715 | 1_2:-33016460 | Msa0067770:CDS |
| AGAGGAGACAGCTATGAAAG+TGG | 0.577915 | 1_2:-33015611 | Msa0067770:CDS |
| GTGATCATGATATTCTAAAG+AGG | 0.579133 | 1_2:-33015275 | Msa0067770:CDS |
| GTGATCGTGATGTTCTAAAG+AGG | 0.587079 | 1_2:-33014926 | Msa0067770:CDS |
| ATGATCTTGAAAAGTTGCAT+GGG | 0.587535 | 1_2:+33015674 | None:intergenic |
| ATTCTACCGTGGAAAGACAT+TGG | 0.588028 | 1_2:-33014227 | Msa0067770:CDS |
| CCAAAAGAGCATGCTTCCCA+TGG | 0.588789 | 1_2:-33014185 | Msa0067770:intron |
| GAAATACTTGTCTCCTAGAG+CGG | 0.589908 | 1_2:-33012457 | Msa0067770:CDS |
| CCAAACCCTAAGAAGTTGCA+AGG | 0.590895 | 1_2:-33015427 | Msa0067770:intron |
| ATGACACAAACTTACGCCCA+TGG | 0.594951 | 1_2:-33015799 | Msa0067770:CDS |
| GTTTCTCCAATGTCTTTCCA+CGG | 0.615143 | 1_2:+33014221 | None:intergenic |
| TATGTGGAGAAATATTGGAA+AGG | 0.617787 | 1_2:-33016444 | Msa0067770:CDS |
| ACTATTACTAAAGCCATCAA+GGG | 0.618938 | 1_2:-33015451 | Msa0067770:CDS |
| ATTTATGGAAGAAAGCAAAG+TGG | 0.622753 | 1_2:-33012486 | Msa0067770:CDS |
| AAATTGTGGAGTTGAAAATG+GGG | 0.628496 | 1_2:-33012583 | Msa0067770:CDS |
| TGATGAGAGTGAAATACCAA+AGG | 0.631208 | 1_2:-33016145 | Msa0067770:CDS |
| AATTGTGGAGTTGAAAATGG+GGG | 0.632867 | 1_2:-33012582 | Msa0067770:CDS |
| GTTCTAAAGAGGAAAGACGC+TGG | 0.637277 | 1_2:-33014915 | Msa0067770:CDS |
| TTTGGTAAATTCCAAACACC+CGG | 0.637463 | 1_2:-33012745 | Msa0067770:intron |
| ATTGTGGAGTTGAAAATGGG+GGG | 0.654265 | 1_2:-33012581 | Msa0067770:CDS |
| TGTGTTTAAAGTTTCCATTG+TGG | 0.655197 | 1_2:-33012417 | Msa0067770:CDS |
| ACTTACCAAGATATGACCAT+GGG | 0.667874 | 1_2:+33015783 | None:intergenic |
| ATATTATCTTATGAAAATCG+GGG | 0.668785 | 1_2:+33016605 | None:intergenic |
| TATAAGGTTCTATCCCACAA+TGG | 0.669677 | 1_2:+33012403 | None:intergenic |
| TACTTACCAAGATATGACCA+TGG | 0.678715 | 1_2:+33015782 | None:intergenic |
| GTGATAAGCATATTCTACCG+TGG | 0.706198 | 1_2:-33014238 | Msa0067770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAATATATTTTTATA+GGG | + | chr1_2:33015943-33015962 | None:intergenic | 0.0% |
| !!! | TTTTTATAATATATTTTTAT+AGG | + | chr1_2:33015944-33015963 | None:intergenic | 0.0% |
| !! | TAAAAATATATTATAAAAAT+TGG | - | chr1_2:33015945-33015964 | Msa0067770:intron | 0.0% |
| !!! | TTAATTTTTAAATATATTGG+TGG | - | chr1_2:33012746-33012765 | Msa0067770:CDS | 10.0% |
| !! | TTAACTAAATAAAGAAATTA+AGG | + | chr1_2:33013870-33013889 | None:intergenic | 10.0% |
| !! | TTAACTAAATAAAGAAATTA+AGG | + | chr1_2:33013870-33013889 | None:intergenic | 10.0% |
| !!! | AATTAAAATTGTTATTAATC+TGG | - | chr1_2:33014956-33014975 | Msa0067770:intron | 10.0% |
| !! | CTATTTATAATTAATGTTTA+AGG | + | chr1_2:33015088-33015107 | None:intergenic | 10.0% |
| !! | TAAAATTTCTTTCAAATTTA+TGG | + | chr1_2:33015111-33015130 | None:intergenic | 10.0% |
| !!! | TAGATTATTATTTTTATAAG+AGG | + | chr1_2:33015498-33015517 | None:intergenic | 10.0% |
| !! | ATAAAAATAATAATCTAAAG+AGG | - | chr1_2:33015501-33015520 | Msa0067770:CDS | 10.0% |
| !!! | GAATTATTAAATATTTTGTA+AGG | + | chr1_2:33015798-33015817 | None:intergenic | 10.0% |
| !! | ACAAAATATTTAATAATTCA+AGG | - | chr1_2:33015799-33015818 | Msa0067770:CDS | 10.0% |
| !!! | AAAATTAGAGATTTTTAAAT+AGG | + | chr1_2:33015912-33015931 | None:intergenic | 10.0% |
| !!! | TAAAAATCTCTAATTTTTTT+TGG | - | chr1_2:33015915-33015934 | Msa0067770:intron | 10.0% |
| !!! | AAAAATCTCTAATTTTTTTT+GGG | - | chr1_2:33015916-33015935 | Msa0067770:intron | 10.0% |
| !!! | AAATCTCTAATTTTTTTTTT+TGG | - | chr1_2:33015976-33015995 | Msa0067770:intron | 10.0% |
| !!! | AATCTCTAATTTTTTTTTTT+GGG | - | chr1_2:33015977-33015996 | Msa0067770:intron | 10.0% |
| !! | ATAAAAAATATATAACCATT+TGG | - | chr1_2:33016049-33016068 | Msa0067770:intron | 10.0% |
| !!! | ATAATGTATAAATGTTATTT+TGG | - | chr1_2:33016375-33016394 | Msa0067770:CDS | 10.0% |
| !! | AATATTATCTTATGAAAATC+GGG | + | chr1_2:33012433-33012452 | None:intergenic | 15.0% |
| !! | CAATATTATCTTATGAAAAT+CGG | + | chr1_2:33012434-33012453 | None:intergenic | 15.0% |
| !! | AAAGAAATTAACGTTTATAA+AGG | + | chr1_2:33012536-33012555 | None:intergenic | 15.0% |
| !! | TTGGAAATTTAAGAAATATT+GGG | + | chr1_2:33012625-33012644 | None:intergenic | 15.0% |
| !! | TTTGGAAATTTAAGAAATAT+TGG | + | chr1_2:33012626-33012645 | None:intergenic | 15.0% |
| !! | ATATTTCTTAAATTTCCAAA+TGG | - | chr1_2:33012626-33012645 | Msa0067770:CDS | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1_2:33012687-33012706 | Msa0067770:intron | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1_2:33012688-33012707 | Msa0067770:intron | 15.0% |
| !!! | ATAAGTAAATTCATTTTCAA+AGG | + | chr1_2:33013026-33013045 | None:intergenic | 15.0% |
| !! | TCATGGATAAAAAAAAATTA+AGG | + | chr1_2:33014060-33014079 | None:intergenic | 15.0% |
| !! | TTCACTAAATAAAGAAATTA+AGG | + | chr1_2:33014218-33014237 | None:intergenic | 15.0% |
| !!! | TTGATAATAATATTCTAAAG+AGG | - | chr1_2:33014489-33014508 | Msa0067770:intron | 15.0% |
| !! | AAAACGTATAAATTATTGAT+AGG | + | chr1_2:33014990-33015009 | None:intergenic | 15.0% |
| !!! | TTTAAGGATACATTTTTTTA+GGG | + | chr1_2:33015046-33015065 | None:intergenic | 15.0% |
| !!! | TTAAGGATACATTTTTTTTA+GGG | + | chr1_2:33015071-33015090 | None:intergenic | 15.0% |
| !!! | TTTAAGGATACATTTTTTTT+AGG | + | chr1_2:33015072-33015091 | None:intergenic | 15.0% |
| !!! | AAACATTTTCAAAGAAATTA+AGG | + | chr1_2:33015322-33015341 | None:intergenic | 15.0% |
| !! | CAAAATATTAAATAGTTCAA+GGG | - | chr1_2:33015353-33015372 | Msa0067770:intron | 15.0% |
| !!! | AGAAAAATCCATTTTTATAT+TGG | - | chr1_2:33015697-33015716 | Msa0067770:intron | 15.0% |
| !!! | GAAAAATCCATTTTTATATT+GGG | - | chr1_2:33015698-33015717 | Msa0067770:intron | 15.0% |
| !!! | ACTTTTAAATAATTTGTGAA+TGG | - | chr1_2:33015771-33015790 | Msa0067770:intron | 15.0% |
| !!! | CTTTTAAATAATTTGTGAAT+GGG | - | chr1_2:33015772-33015791 | Msa0067770:intron | 15.0% |
| !!! | CATATCAATAGTTTTTATAT+AGG | + | chr1_2:33015852-33015871 | None:intergenic | 15.0% |
| !! | AAAAACTATTGATATGTTTA+AGG | - | chr1_2:33015856-33015875 | Msa0067770:CDS | 15.0% |
| !! | AAAACTATTGATATGTTTAA+GGG | - | chr1_2:33015857-33015876 | Msa0067770:CDS | 15.0% |
| !!! | AAAGATTTAGAGATTTTTAA+AGG | + | chr1_2:33016005-33016024 | None:intergenic | 15.0% |
| !! | ATATTATCTTATGAAAATCG+GGG | + | chr1_2:33012432-33012451 | None:intergenic | 20.0% |
| !!! | TGTTCAACAAGAAATATTTT+GGG | - | chr1_2:33012649-33012668 | Msa0067770:intron | 20.0% |
| !! | TATTTCAAGGTTAAGATATT+TGG | - | chr1_2:33012773-33012792 | Msa0067770:CDS | 20.0% |
| !!! | TTCATCAACAGATTTTATAT+TGG | + | chr1_2:33012825-33012844 | None:intergenic | 20.0% |
| !! | AAGGAAACATGATATTAAAA+AGG | + | chr1_2:33013007-33013026 | None:intergenic | 20.0% |
| !! | TCTAAAAATGTCTACTAATT+TGG | - | chr1_2:33013279-33013298 | Msa0067770:intron | 20.0% |
| !! | CACTAATCTATAATAAAATG+TGG | - | chr1_2:33013315-33013334 | Msa0067770:intron | 20.0% |
| !!! | CAACTTCTAAGTTATATTTT+TGG | + | chr1_2:33013510-33013529 | None:intergenic | 20.0% |
| !! | CAAAAATATAACTTAGAAGT+TGG | - | chr1_2:33013508-33013527 | Msa0067770:intron | 20.0% |
| !! | ATAGTAATAGTGAATAAAAG+TGG | + | chr1_2:33013568-33013587 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTATCCATGACA+AGG | - | chr1_2:33014062-33014081 | Msa0067770:intron | 20.0% |
| !! | TAAATTATTGATAGGTTTAG+AGG | + | chr1_2:33014982-33015001 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTAGGGAATTTA+AGG | + | chr1_2:33015037-33015056 | None:intergenic | 20.0% |
| !!! | GTTTAAGGATACATTTTTTT+AGG | + | chr1_2:33015047-33015066 | None:intergenic | 20.0% |
| !! | TTGAACCTTAGAAAATATTT+AGG | - | chr1_2:33015170-33015189 | Msa0067770:intron | 20.0% |
| !!! | GAATTCCTAAATATTTTCTA+AGG | + | chr1_2:33015178-33015197 | None:intergenic | 20.0% |
| !!! | CACATCAATAATTTGTATAT+AGG | + | chr1_2:33015226-33015245 | None:intergenic | 20.0% |
| !! | ACAAATTATTGATGTGTTTA+AGG | - | chr1_2:33015230-33015249 | Msa0067770:CDS | 20.0% |
| !! | GCAAAATATTAAATAGTTCA+AGG | - | chr1_2:33015352-33015371 | Msa0067770:intron | 20.0% |
| !!! | CATCTTTTTGAATTGTTATT+TGG | - | chr1_2:33015414-33015433 | Msa0067770:intron | 20.0% |
| !!! | TTTAGATTTTACTATTGTGA+AGG | - | chr1_2:33015605-33015624 | Msa0067770:CDS | 20.0% |
| !! | TTTCTACTATATAAGTTTAG+AGG | + | chr1_2:33015682-33015701 | None:intergenic | 20.0% |
| !!! | TCATTTTCCCAATATAAAAA+TGG | + | chr1_2:33015708-33015727 | None:intergenic | 20.0% |
| !!! | TTTTTATATTGGGAAAATGA+AGG | - | chr1_2:33015708-33015727 | Msa0067770:intron | 20.0% |
| !!! | TCAGTAAATTAATTTTTCGT+TGG | - | chr1_2:33015824-33015843 | Msa0067770:CDS | 20.0% |
| !! | AAAATATATAACCATTTGGT+TGG | - | chr1_2:33016053-33016072 | Msa0067770:intron | 20.0% |
| !! | AGGGTTAATTACATAAAATA+TGG | - | chr1_2:33016313-33016332 | Msa0067770:CDS | 20.0% |
| !! | TAAAGGTTGGATAAAATTTA+TGG | - | chr1_2:33016533-33016552 | Msa0067770:intron | 20.0% |
| ! | TATTTCTCCACATATTTCTT+GGG | + | chr1_2:33012584-33012603 | None:intergenic | 25.0% |
| ! | ATATTTCTCCACATATTTCT+TGG | + | chr1_2:33012585-33012604 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1_2:33012585-33012604 | Msa0067770:CDS | 25.0% |
| !! | GTGTTCAACAAGAAATATTT+TGG | - | chr1_2:33012648-33012667 | Msa0067770:intron | 25.0% |
| ! | AAGCTCAAATGATAACAAAT+GGG | - | chr1_2:33012912-33012931 | Msa0067770:intron | 25.0% |
| ! | GTCATTAAAACTTCAAAGAA+GGG | + | chr1_2:33013220-33013239 | None:intergenic | 25.0% |
| ! | TGTCATTAAAACTTCAAAGA+AGG | + | chr1_2:33013221-33013240 | None:intergenic | 25.0% |
| ! | TCATACTTGAACAAATTTGA+AGG | - | chr1_2:33013379-33013398 | Msa0067770:intron | 25.0% |
| ! | CATACTTGAACAAATTTGAA+GGG | - | chr1_2:33013380-33013399 | Msa0067770:intron | 25.0% |
| ! | GTTATGGATCAAAGAAATTA+AGG | + | chr1_2:33013903-33013922 | None:intergenic | 25.0% |
| ! | AATTTCTTTGATCCATAACA+AGG | - | chr1_2:33013904-33013923 | Msa0067770:intron | 25.0% |
| ! | TCTTCTTTATAACCTTGTTA+TGG | + | chr1_2:33013919-33013938 | None:intergenic | 25.0% |
| !! | ATGATCATGATATTCTAAAG+AGG | - | chr1_2:33014298-33014317 | Msa0067770:intron | 25.0% |
| ! | ACTTCTTTATAACCTTGTAA+GGG | + | chr1_2:33014458-33014477 | None:intergenic | 25.0% |
| ! | AACTTCTTTATAACCTTGTA+AGG | + | chr1_2:33014459-33014478 | None:intergenic | 25.0% |
| !! | AAGTTTGATGATTATACCAT+GGG | + | chr1_2:33014868-33014887 | None:intergenic | 25.0% |
| !! | AAAGTTTGATGATTATACCA+TGG | + | chr1_2:33014869-33014888 | None:intergenic | 25.0% |
| !!! | CATTTTTTTTAGGGAGTTTA+AGG | + | chr1_2:33015062-33015081 | None:intergenic | 25.0% |
| ! | CATAAATAATAACTGAACAC+TGG | + | chr1_2:33015200-33015219 | None:intergenic | 25.0% |
| ! | CAGTGTTCAGTTATTATTTA+TGG | - | chr1_2:33015198-33015217 | Msa0067770:intron | 25.0% |
| ! | AATCTAAAGAGGAAATTCAT+TGG | - | chr1_2:33015512-33015531 | Msa0067770:CDS | 25.0% |
| !! | ATTTTGTGTGTAGAATCAAA+GGG | - | chr1_2:33016233-33016252 | Msa0067770:CDS | 25.0% |
| !! | TTTTATGTAATTAACCCTAC+CGG | + | chr1_2:33016311-33016330 | None:intergenic | 25.0% |
| ! | AAAAATTGTGGAGTTGAAAA+TGG | - | chr1_2:33016449-33016468 | Msa0067770:CDS | 25.0% |
| ! | AAAATTGTGGAGTTGAAAAT+GGG | - | chr1_2:33016450-33016469 | Msa0067770:CDS | 25.0% |
| ! | ATTTATTATCCTAGTATTCG+TGG | - | chr1_2:33016498-33016517 | Msa0067770:intron | 25.0% |
| TTCTCTGCAACAAAGAAATT+CGG | + | chr1_2:33012559-33012578 | None:intergenic | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_2:33012590-33012609 | Msa0067770:CDS | 30.0% | |
| ATTTCTTGTTGAACACCATT+TGG | + | chr1_2:33012644-33012663 | None:intergenic | 30.0% | |
| !! | TCAACAAGAAATATTTTGGG+TGG | - | chr1_2:33012652-33012671 | Msa0067770:intron | 30.0% |
| !! | ATATTTTGGGTGGAGAATAA+TGG | - | chr1_2:33012662-33012681 | Msa0067770:intron | 30.0% |
| TGGAGAATAATGGTGATATT+TGG | - | chr1_2:33012672-33012691 | Msa0067770:intron | 30.0% | |
| TTTGCAAAGTCTCTCAAATA+TGG | - | chr1_2:33012716-33012735 | Msa0067770:intron | 30.0% | |
| ! | TATTGGTGGATCATATTTCA+AGG | - | chr1_2:33012760-33012779 | Msa0067770:CDS | 30.0% |
| GAAGCTCAAATGATAACAAA+TGG | - | chr1_2:33012911-33012930 | Msa0067770:intron | 30.0% | |
| !! | TAACAAATGAACTCTAAAGC+AGG | - | chr1_2:33013112-33013131 | Msa0067770:intron | 30.0% |
| AAAGAAGGGATTCTCATTAT+TGG | + | chr1_2:33013206-33013225 | None:intergenic | 30.0% | |
| TGTGGTTCATGAATTGAAAT+AGG | - | chr1_2:33013333-33013352 | Msa0067770:intron | 30.0% | |
| ATGATCTTGAAAAGTTGCAT+GGG | + | chr1_2:33013363-33013382 | None:intergenic | 30.0% | |
| TATGATCTTGAAAAGTTGCA+TGG | + | chr1_2:33013364-33013383 | None:intergenic | 30.0% | |
| TCTTCTAATTCTATGACTAC+TGG | - | chr1_2:33013469-33013488 | Msa0067770:intron | 30.0% | |
| TACTATTACTAAAGCCATCA+AGG | - | chr1_2:33013582-33013601 | Msa0067770:intron | 30.0% | |
| ACTATTACTAAAGCCATCAA+GGG | - | chr1_2:33013583-33013602 | Msa0067770:intron | 30.0% | |
| AAAAACCTTGCAACTTCTTA+GGG | + | chr1_2:33013615-33013634 | None:intergenic | 30.0% | |
| AAAAAACCTTGCAACTTCTT+AGG | + | chr1_2:33013616-33013635 | None:intergenic | 30.0% | |
| TCTCATGGATCAAAGAAAAT+AGG | + | chr1_2:33013713-33013732 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGATCCATGAGA+AGG | - | chr1_2:33013713-33013732 | Msa0067770:intron | 30.0% |
| CATGAGAAGGTTATAAAGAA+GGG | - | chr1_2:33013726-33013745 | Msa0067770:intron | 30.0% | |
| ! | GTGATCATGATATTCTAAAG+AGG | - | chr1_2:33013759-33013778 | Msa0067770:intron | 30.0% |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1_2:33014075-33014094 | Msa0067770:intron | 30.0% | |
| TATAAAGAAGGGATCTCTTA+TGG | - | chr1_2:33014086-33014105 | Msa0067770:intron | 30.0% | |
| GTCATGGATCAAAGAAATTA+AGG | + | chr1_2:33014251-33014270 | None:intergenic | 30.0% | |
| AATTTCTTTGATCCATGACA+AGG | - | chr1_2:33014252-33014271 | Msa0067770:CDS | 30.0% | |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1_2:33014075-33014094 | Msa0067770:intron | 30.0% | |
| ! | ATTCTAAAGAGGAAAGACAT+TGG | - | chr1_2:33014309-33014328 | Msa0067770:intron | 30.0% |
| CTTTCTTTATAACCTTGACA+TGG | + | chr1_2:33015470-33015489 | None:intergenic | 30.0% | |
| CATGTCAAGGTTATAAAGAA+AGG | - | chr1_2:33015468-33015487 | Msa0067770:CDS | 30.0% | |
| AATTCATTGGAGAATCTTGT+AGG | - | chr1_2:33015525-33015544 | Msa0067770:CDS | 30.0% | |
| ! | TCTCAAGTGTCAATTTTTGT+AGG | - | chr1_2:33016112-33016131 | Msa0067770:CDS | 30.0% |
| ! | TCTCAAGTGTCAATTTTTGT+AGG | - | chr1_2:33016112-33016131 | Msa0067770:CDS | 30.0% |
| ! | CATTTTGTGTGTAGAATCAA+AGG | - | chr1_2:33016232-33016251 | Msa0067770:CDS | 30.0% |
| GATGAAACACAATACATTCA+AGG | - | chr1_2:33016265-33016284 | Msa0067770:CDS | 30.0% | |
| ! | ACACAATACATTCAAGGTTT+TGG | - | chr1_2:33016271-33016290 | Msa0067770:CDS | 30.0% |
| TTTATGTAATTAACCCTACC+GGG | + | chr1_2:33016310-33016329 | None:intergenic | 30.0% | |
| AAATTGTGGAGTTGAAAATG+GGG | - | chr1_2:33016451-33016470 | Msa0067770:CDS | 30.0% | |
| ATTTATGGAAGAAAGCAAAG+TGG | - | chr1_2:33016548-33016567 | Msa0067770:intron | 30.0% | |
| ! | TGTGTTTAAAGTTTCCATTG+TGG | - | chr1_2:33016617-33016636 | Msa0067770:CDS | 30.0% |
| ! | GTGTTTAAAGTTTCCATTGT+GGG | - | chr1_2:33016618-33016637 | Msa0067770:CDS | 30.0% |
| GAGAATTCCCAAGAAATATG+TGG | - | chr1_2:33012574-33012593 | Msa0067770:CDS | 35.0% | |
| TGATGAGAGTGAAATACCAA+AGG | - | chr1_2:33012889-33012908 | Msa0067770:intron | 35.0% | |
| GTTATCATTTGAGCTTCCTT+TGG | + | chr1_2:33012908-33012927 | None:intergenic | 35.0% | |
| ACTCTTAAGCAAAAATTCCC+AGG | - | chr1_2:33012962-33012981 | Msa0067770:intron | 35.0% | |
| ATCAAATGAAGTTCTCACCT+GGG | + | chr1_2:33012982-33013001 | None:intergenic | 35.0% | |
| AATCAAATGAAGTTCTCACC+TGG | + | chr1_2:33012983-33013002 | None:intergenic | 35.0% | |
| !! | AAATGAACTCTAAAGCAGGT+AGG | - | chr1_2:33013116-33013135 | Msa0067770:intron | 35.0% |
| ACTTACCAAGATATGACCAT+GGG | + | chr1_2:33013254-33013273 | None:intergenic | 35.0% | |
| TACTTACCAAGATATGACCA+TGG | + | chr1_2:33013255-33013274 | None:intergenic | 35.0% | |
| CTAATTCTATGACTACTGGT+TGG | - | chr1_2:33013473-33013492 | Msa0067770:intron | 35.0% | |
| CCTTCTTTATAACCTTCTCA+TGG | + | chr1_2:33013728-33013747 | None:intergenic | 35.0% | |
| CCATGAGAAGGTTATAAAGA+AGG | - | chr1_2:33013725-33013744 | Msa0067770:intron | 35.0% | |
| TATAAAGAAGGGATCTCTTC+TGG | - | chr1_2:33013737-33013756 | Msa0067770:intron | 35.0% | |
| !! | AAGTGCATGCATTTTTGGAA+GGG | + | chr1_2:33013810-33013829 | None:intergenic | 35.0% |
| ! | GTGATCGTGATATTCTAAAG+TGG | - | chr1_2:33013950-33013969 | Msa0067770:intron | 35.0% |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_2:33014077-33014096 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_2:33014074-33014093 | Msa0067770:intron | 35.0% | |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_2:33014077-33014096 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_2:33014074-33014093 | Msa0067770:intron | 35.0% | |
| AAGACATTGGAGAAACTTGT+AGG | - | chr1_2:33014322-33014341 | Msa0067770:intron | 35.0% | |
| GTAAGGGATCAAAGAAGTTA+AGG | + | chr1_2:33014442-33014461 | None:intergenic | 35.0% | |
| AACTTCTTTGATCCCTTACA+AGG | - | chr1_2:33014443-33014462 | Msa0067770:intron | 35.0% | |
| GAGACACTAGAGAAATTTGT+CGG | - | chr1_2:33014513-33014532 | Msa0067770:intron | 35.0% | |
| AAGAAGTTAGAAGAATACCC+TGG | + | chr1_2:33014562-33014581 | None:intergenic | 35.0% | |
| GTCATGGATCAAAGAAACTA+AGG | + | chr1_2:33014749-33014768 | None:intergenic | 35.0% | |
| AGTTTCTTTGATCCATGACA+AGG | - | chr1_2:33014750-33014769 | Msa0067770:CDS | 35.0% | |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_2:33014077-33014096 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_2:33014074-33014093 | Msa0067770:intron | 35.0% | |
| AAGACATTGGAGAAACATCT+AGG | - | chr1_2:33014820-33014839 | Msa0067770:intron | 35.0% | |
| GACATGGATCAAAGAAATCA+AGG | + | chr1_2:33015454-33015473 | None:intergenic | 35.0% | |
| GATTTCTTTGATCCATGTCA+AGG | - | chr1_2:33015455-33015474 | Msa0067770:CDS | 35.0% | |
| TTTGGTAAATTCCAAACACC+CGG | - | chr1_2:33016289-33016308 | Msa0067770:CDS | 35.0% | |
| CCTCTTTCCATAAATCTCTT+TGG | + | chr1_2:33016420-33016439 | None:intergenic | 35.0% | |
| CCAAAGAGATTTATGGAAAG+AGG | - | chr1_2:33016417-33016436 | Msa0067770:CDS | 35.0% | |
| AGGATGTCGTGAAAAAATTG+TGG | - | chr1_2:33016437-33016456 | Msa0067770:CDS | 35.0% | |
| AATTGTGGAGTTGAAAATGG+GGG | - | chr1_2:33016452-33016471 | Msa0067770:CDS | 35.0% | |
| GAAGAAAGCAAAGTGGAAAT+TGG | - | chr1_2:33016555-33016574 | Msa0067770:intron | 35.0% | |
| ! | ATTCTAAAGAGGAGAGACAC+TGG | - | chr1_2:33013770-33013789 | Msa0067770:intron | 40.0% |
| !! | GAAGTGCATGCATTTTTGGA+AGG | + | chr1_2:33013811-33013830 | None:intergenic | 40.0% |
| TCCAAAAATGCATGCACTTC+AGG | - | chr1_2:33013811-33013830 | Msa0067770:intron | 40.0% | |
| CCAAAAATGCATGCACTTCA+GGG | - | chr1_2:33013812-33013831 | Msa0067770:intron | 40.0% | |
| AAGACACTCGAGAAACTTGT+AGG | - | chr1_2:33013974-33013993 | Msa0067770:intron | 40.0% | |
| !! | AAGAGCATGCACTTTTGGAA+GGG | + | chr1_2:33014001-33014020 | None:intergenic | 40.0% |
| !! | GTGATCGTGATGTTCTAAAG+AGG | - | chr1_2:33014108-33014127 | Msa0067770:intron | 40.0% |
| !! | AAGAGCTTGCACTTTTGGAA+GGG | + | chr1_2:33014159-33014178 | None:intergenic | 40.0% |
| !! | AAGAGCATGCACTTTTGGAA+GGG | + | chr1_2:33014001-33014020 | None:intergenic | 40.0% |
| GTGATAAGCATATTCTACCG+TGG | - | chr1_2:33014796-33014815 | Msa0067770:intron | 40.0% | |
| ATTCTACCGTGGAAAGACAT+TGG | - | chr1_2:33014807-33014826 | Msa0067770:intron | 40.0% | |
| GTTTCTCCAATGTCTTTCCA+CGG | + | chr1_2:33014816-33014835 | None:intergenic | 40.0% | |
| !!! | GTAGATCATGCAGTTTTGGA+CGG | + | chr1_2:33015553-33015572 | None:intergenic | 40.0% |
| ! | CTCTGTAGATCATGCAGTTT+TGG | + | chr1_2:33015557-33015576 | None:intergenic | 40.0% |
| AGACTGTCAAACCAACCAAA+TGG | + | chr1_2:33016067-33016086 | None:intergenic | 40.0% | |
| !! | TTTGGTTGGTTTGACAGTCT+TGG | - | chr1_2:33016067-33016086 | Msa0067770:intron | 40.0% |
| TAAATTCCAAACACCCGGTA+GGG | - | chr1_2:33016294-33016313 | Msa0067770:CDS | 40.0% | |
| GCATGCACCAAAGAGATTTA+TGG | - | chr1_2:33016410-33016429 | Msa0067770:CDS | 40.0% | |
| ATTGTGGAGTTGAAAATGGG+GGG | - | chr1_2:33016453-33016472 | Msa0067770:CDS | 40.0% | |
| AACTGACAACCACGAATACT+AGG | + | chr1_2:33016510-33016529 | None:intergenic | 40.0% | |
| GTTGTCAGTTCAGTAAAGGT+TGG | - | chr1_2:33016520-33016539 | Msa0067770:intron | 40.0% | |
| GAAATACTTGTCTCCTAGAG+CGG | - | chr1_2:33016577-33016596 | Msa0067770:intron | 40.0% | |
| ! | TTTTCTCATCAATCCGCTCT+AGG | + | chr1_2:33016593-33016612 | None:intergenic | 40.0% |
| ATGACACAAACTTACGCCCA+TGG | - | chr1_2:33013235-33013254 | Msa0067770:intron | 45.0% | |
| TTACGCCCATGGTCATATCT+TGG | - | chr1_2:33013246-33013265 | Msa0067770:intron | 45.0% | |
| GGGATTGCAAGCTTAAGAGT+TGG | - | chr1_2:33013400-33013419 | Msa0067770:intron | 45.0% | |
| TGCAAGCTTAAGAGTTGGAG+AGG | - | chr1_2:33013405-33013424 | Msa0067770:intron | 45.0% | |
| AGAGGAGACAGCTATGAAAG+TGG | - | chr1_2:33013423-33013442 | Msa0067770:intron | 45.0% | |
| CCTTGCAACTTCTTAGGGTT+TGG | + | chr1_2:33013610-33013629 | None:intergenic | 45.0% | |
| CCAAACCCTAAGAAGTTGCA+AGG | - | chr1_2:33013607-33013626 | Msa0067770:intron | 45.0% | |
| GAGACACTGGAGAAACTTGT+AGG | - | chr1_2:33013783-33013802 | Msa0067770:intron | 45.0% | |
| ! | CCCTGAAGTGCATGCATTTT+TGG | + | chr1_2:33013815-33013834 | None:intergenic | 45.0% |
| !! | GAAGAGCATGCACTTTTGGA+AGG | + | chr1_2:33014002-33014021 | None:intergenic | 45.0% |
| ! | TCCAAAAGTGCATGCTCTTC+AGG | - | chr1_2:33014002-33014021 | Msa0067770:intron | 45.0% |
| ! | CCAAAAGTGCATGCTCTTCA+GGG | - | chr1_2:33014003-33014022 | Msa0067770:intron | 45.0% |
| !! | GTTCTAAAGAGGAAAGACGC+TGG | - | chr1_2:33014119-33014138 | Msa0067770:intron | 45.0% |
| AAGACGCTGGAGAAACTTGT+AGG | - | chr1_2:33014132-33014151 | Msa0067770:intron | 45.0% | |
| ! | GAAGAGCTTGCACTTTTGGA+AGG | + | chr1_2:33014160-33014179 | None:intergenic | 45.0% |
| ! | CCTTGAAGAGCTTGCACTTT+TGG | + | chr1_2:33014164-33014183 | None:intergenic | 45.0% |
| ! | CCAAAAGTGCAAGCTCTTCA+AGG | - | chr1_2:33014161-33014180 | Msa0067770:intron | 45.0% |
| !! | GAAGAGCATGCACTTTTGGA+AGG | + | chr1_2:33014002-33014021 | None:intergenic | 45.0% |
| ! | TCCAAAAGTGCATGCTCTTC+AGG | - | chr1_2:33014002-33014021 | Msa0067770:intron | 45.0% |
| ! | CCAAAAGTGCATGCTCTTCA+GGG | - | chr1_2:33014003-33014022 | Msa0067770:intron | 45.0% |
| GTAAATTCCAAACACCCGGT+AGG | - | chr1_2:33016293-33016312 | Msa0067770:CDS | 45.0% | |
| AATTAACCCTACCGGGTGTT+TGG | + | chr1_2:33016303-33016322 | None:intergenic | 45.0% | |
| TGAAAATGGGGGGACAATCA+TGG | - | chr1_2:33016463-33016482 | Msa0067770:intron | 45.0% | |
| CGTGGTTGTCAGTTCAGTAA+AGG | - | chr1_2:33016516-33016535 | Msa0067770:intron | 45.0% | |
| !!! | CTTTTAATTTTTAAATATAT+TGG | - | chr1_2:33012743-33012762 | Msa0067770:intron | 5.0% |
| !!! | ATTTATTTGTAATTTTTTTA+TGG | - | chr1_2:33014684-33014703 | Msa0067770:CDS | 5.0% |
| ! | CTTAGGGTTTGGTCCCTTGA+TGG | + | chr1_2:33013599-33013618 | None:intergenic | 50.0% |
| !! | CCCTGAAGAGCATGCACTTT+TGG | + | chr1_2:33014006-33014025 | None:intergenic | 50.0% |
| !! | CCCTGAAGAGCATGCACTTT+TGG | + | chr1_2:33014006-33014025 | None:intergenic | 50.0% |
| !! | GGAGAGCATGCACTTTTGGA+CGG | + | chr1_2:33014541-33014560 | None:intergenic | 50.0% |
| ! | TCCAAAAGTGCATGCTCTCC+AGG | - | chr1_2:33014541-33014560 | Msa0067770:intron | 50.0% |
| ! | CCAAAAGTGCATGCTCTCCA+GGG | - | chr1_2:33014542-33014561 | Msa0067770:intron | 50.0% |
| !! | CCATGGGAAGCATGCTCTTT+TGG | + | chr1_2:33014852-33014871 | None:intergenic | 50.0% |
| ! | CCAAAAGAGCATGCTTCCCA+TGG | - | chr1_2:33014849-33014868 | Msa0067770:intron | 50.0% |
| !! | CCCTGGAGAGCATGCACTTT+TGG | + | chr1_2:33014545-33014564 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33012412 | 33016644 | 33012412 | ID=Msa0067770;Name=Msa0067770 |
| chr1_2 | mRNA | 33012412 | 33016644 | 33012412 | ID=Msa0067770-mRNA-1;Parent=Msa0067770;Name=Msa0067770-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|1|1|10|0|522 |
| chr1_2 | exon | 33016588 | 33016644 | 33016588 | ID=Msa0067770-mRNA-1:exon:10860;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33016073 | 33016481 | 33016073 | ID=Msa0067770-mRNA-1:exon:10859;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33015789 | 33015922 | 33015789 | ID=Msa0067770-mRNA-1:exon:10858;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33015428 | 33015701 | 33015428 | ID=Msa0067770-mRNA-1:exon:10857;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33015223 | 33015321 | 33015223 | ID=Msa0067770-mRNA-1:exon:10856;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33014874 | 33014972 | 33014874 | ID=Msa0067770-mRNA-1:exon:10855;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33014684 | 33014782 | 33014684 | ID=Msa0067770-mRNA-1:exon:10854;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33014186 | 33014284 | 33014186 | ID=Msa0067770-mRNA-1:exon:10853;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33012746 | 33012810 | 33012746 | ID=Msa0067770-mRNA-1:exon:10852;Parent=Msa0067770-mRNA-1 |
| chr1_2 | exon | 33012412 | 33012645 | 33012412 | ID=Msa0067770-mRNA-1:exon:10851;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33016588 | 33016644 | 33016588 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33016073 | 33016481 | 33016073 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33015789 | 33015922 | 33015789 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33015428 | 33015701 | 33015428 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33015223 | 33015321 | 33015223 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33014874 | 33014972 | 33014874 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33014684 | 33014782 | 33014684 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33014186 | 33014284 | 33014186 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33012746 | 33012810 | 33012746 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| chr1_2 | CDS | 33012412 | 33012645 | 33012412 | ID=Msa0067770-mRNA-1:cds;Parent=Msa0067770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
