Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067780 | KEH40807.1 | 86.811 | 417 | 49 | 6 | 1 | 415 | 1 | 413 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067780 | A0A072VG97 | 86.811 | 417 | 49 | 6 | 1 | 415 | 1 | 413 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0067780 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067780 | MtrunA17_Chr1g0163231 | 88.927 | 289 | 29 | 3 | 1 | 288 | 1 | 287 | 0.0 | 525 |
| Msa0067780 | MtrunA17_Chr1g0171611 | 84.642 | 293 | 28 | 2 | 1 | 291 | 1 | 278 | 5.05e-174 | 488 |
| Msa0067780 | MtrunA17_Chr1g0163181 | 43.341 | 443 | 203 | 13 | 1 | 410 | 1 | 428 | 7.71e-107 | 322 |
| Msa0067780 | MtrunA17_Chr1g0163201 | 46.210 | 409 | 163 | 13 | 24 | 410 | 18 | 391 | 6.42e-105 | 316 |
| Msa0067780 | MtrunA17_Chr1g0163261 | 56.566 | 297 | 102 | 7 | 1 | 282 | 1 | 285 | 4.35e-101 | 303 |
| Msa0067780 | MtrunA17_Chr1g0163251 | 48.773 | 326 | 138 | 8 | 1 | 307 | 1 | 316 | 2.98e-94 | 288 |
| Msa0067780 | MtrunA17_Chr1g0163111 | 43.651 | 252 | 115 | 11 | 161 | 410 | 1 | 227 | 4.68e-51 | 171 |
| Msa0067780 | MtrunA17_Chr1g0163151 | 39.841 | 251 | 119 | 8 | 161 | 410 | 1 | 220 | 1.87e-45 | 156 |
| Msa0067780 | MtrunA17_Chr1g0163241 | 59.055 | 127 | 49 | 1 | 24 | 147 | 22 | 148 | 8.05e-45 | 153 |
| Msa0067780 | MtrunA17_Chr1g0162151 | 42.353 | 255 | 95 | 10 | 161 | 411 | 1 | 207 | 2.30e-40 | 143 |
| Msa0067780 | MtrunA17_Chr1g0163191 | 55.285 | 123 | 50 | 2 | 1 | 122 | 1 | 119 | 3.75e-39 | 138 |
| Msa0067780 | MtrunA17_Chr6g0476171 | 35.115 | 262 | 137 | 6 | 158 | 410 | 7 | 244 | 1.35e-38 | 139 |
| Msa0067780 | MtrunA17_Chr7g0233561 | 31.633 | 294 | 178 | 7 | 6 | 276 | 15 | 308 | 4.58e-33 | 127 |
| Msa0067780 | MtrunA17_Chr3g0131891 | 31.959 | 291 | 171 | 11 | 6 | 276 | 16 | 299 | 1.50e-31 | 122 |
| Msa0067780 | MtrunA17_Chr8g0390841 | 24.603 | 504 | 270 | 17 | 2 | 412 | 32 | 518 | 3.98e-30 | 122 |
| Msa0067780 | MtrunA17_Chr1g0163131 | 37.900 | 219 | 118 | 6 | 200 | 410 | 97 | 305 | 5.00e-30 | 118 |
| Msa0067780 | MtrunA17_Chr1g0163131 | 35.625 | 160 | 93 | 3 | 5 | 155 | 14 | 172 | 2.79e-26 | 107 |
| Msa0067780 | MtrunA17_Chr1g0163091 | 49.600 | 125 | 56 | 3 | 161 | 282 | 1 | 121 | 7.42e-28 | 108 |
| Msa0067780 | MtrunA17_Chr1g0162161 | 43.662 | 142 | 67 | 5 | 25 | 155 | 4 | 143 | 1.05e-27 | 107 |
| Msa0067780 | MtrunA17_Chr1g0163101 | 36.310 | 168 | 92 | 4 | 2 | 158 | 3 | 166 | 4.32e-26 | 103 |
| Msa0067780 | MtrunA17_Chr1g0208771 | 24.569 | 464 | 258 | 18 | 24 | 412 | 12 | 458 | 6.03e-26 | 109 |
| Msa0067780 | MtrunA17_Chr1g0163121 | 43.750 | 112 | 62 | 1 | 20 | 131 | 6 | 116 | 6.34e-24 | 96.7 |
| Msa0067780 | MtrunA17_Chr7g0233521 | 27.839 | 273 | 161 | 7 | 25 | 276 | 2 | 259 | 1.20e-23 | 99.8 |
| Msa0067780 | MtrunA17_Chr7g0233531 | 30.037 | 273 | 155 | 9 | 25 | 276 | 2 | 259 | 1.31e-23 | 99.8 |
| Msa0067780 | MtrunA17_Chr1g0163081 | 43.925 | 107 | 59 | 1 | 25 | 131 | 6 | 111 | 3.34e-23 | 94.7 |
| Msa0067780 | MtrunA17_Chr7g0233541 | 26.644 | 289 | 161 | 6 | 25 | 276 | 2 | 276 | 1.98e-22 | 96.7 |
| Msa0067780 | MtrunA17_Chr1g0163141 | 36.923 | 130 | 72 | 2 | 23 | 143 | 9 | 137 | 2.41e-22 | 93.6 |
| Msa0067780 | MtrunA17_Chr5g0419201 | 33.333 | 180 | 93 | 4 | 3 | 155 | 10 | 189 | 2.78e-21 | 90.9 |
| Msa0067780 | MtrunA17_Chr7g0233571 | 31.429 | 175 | 110 | 3 | 6 | 175 | 7 | 176 | 3.41e-21 | 91.7 |
| Msa0067780 | MtrunA17_Chr6g0476181 | 36.601 | 153 | 74 | 4 | 25 | 155 | 2 | 153 | 3.59e-21 | 89.7 |
| Msa0067780 | MtrunA17_Chr1g0163221 | 27.338 | 278 | 174 | 7 | 9 | 268 | 11 | 278 | 1.60e-20 | 92.4 |
| Msa0067780 | MtrunA17_Chr3g0103181 | 24.382 | 283 | 187 | 8 | 6 | 276 | 9 | 276 | 1.05e-19 | 88.6 |
| Msa0067780 | MtrunA17_Chr4g0067431 | 24.590 | 305 | 182 | 10 | 9 | 276 | 15 | 308 | 1.82e-18 | 85.9 |
| Msa0067780 | MtrunA17_Chr1g0163071 | 24.242 | 297 | 165 | 10 | 25 | 276 | 2 | 283 | 9.33e-18 | 83.6 |
| Msa0067780 | MtrunA17_Chr3g0103191 | 34.646 | 127 | 72 | 3 | 6 | 130 | 9 | 126 | 1.10e-17 | 82.4 |
| Msa0067780 | MtrunA17_Chr6g0467351 | 40.179 | 112 | 60 | 3 | 9 | 117 | 15 | 122 | 2.08e-17 | 80.9 |
| Msa0067780 | MtrunA17_Chr3g0103171 | 24.444 | 270 | 175 | 10 | 24 | 276 | 5 | 262 | 2.25e-17 | 81.6 |
| Msa0067780 | MtrunA17_Chr3g0103151 | 34.921 | 126 | 72 | 3 | 6 | 129 | 9 | 126 | 2.25e-17 | 79.0 |
| Msa0067780 | MtrunA17_Chr1g0163161 | 35.417 | 96 | 61 | 1 | 37 | 132 | 1 | 95 | 3.65e-14 | 69.3 |
| Msa0067780 | MtrunA17_Chr1g0163061 | 36.634 | 101 | 61 | 2 | 8 | 105 | 14 | 114 | 1.51e-13 | 70.5 |
| Msa0067780 | MtrunA17_Chr3g0077451 | 24.151 | 265 | 162 | 8 | 23 | 284 | 10 | 238 | 3.67e-12 | 65.9 |
| Msa0067780 | MtrunA17_Chr4g0033961 | 22.738 | 431 | 260 | 14 | 9 | 413 | 6 | 389 | 4.13e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTGCAGATGACACTTTA+AGG | 0.106253 | 1_2:-33071409 | None:intergenic |
| GTGCTCAAAAGGAAATATTT+TGG | 0.171981 | 1_2:+33070661 | Msa0067780:CDS |
| AAAATCTTAACCTTAAAATA+TGG | 0.178478 | 1_2:-33070783 | None:intergenic |
| TCTTCTTATGATGATGATAT+TGG | 0.197327 | 1_2:+33071753 | Msa0067780:CDS |
| ATTATCAGTCAACAGGATTT+AGG | 0.220407 | 1_2:+33072489 | Msa0067780:CDS |
| ATATTTGGTTTAAGAGAAAT+TGG | 0.235240 | 1_2:+33070700 | Msa0067780:CDS |
| AGAAATTTGTGGAGAAATAT+TGG | 0.241294 | 1_2:+33070598 | Msa0067780:CDS |
| TTTGGAAGTCTAAGAATTAC+TGG | 0.251892 | 1_2:-33070636 | None:intergenic |
| GCTTTAGTATTCAAATATTT+AGG | 0.260785 | 1_2:+33070756 | Msa0067780:CDS |
| AGTCTAAGAATTACTGGATT+TGG | 0.299817 | 1_2:-33070630 | None:intergenic |
| ATATTTCTCCACAAATTTCT+TGG | 0.318034 | 1_2:-33070595 | None:intergenic |
| ACTATCTTCAAGAACTCTTC+TGG | 0.329140 | 1_2:-33070340 | None:intergenic |
| AAGAAGCATAAAGAGCTTCA+TGG | 0.346703 | 1_2:+33072413 | Msa0067780:CDS |
| CTTCTTATGATGATGATATT+GGG | 0.358933 | 1_2:+33071754 | Msa0067780:CDS |
| TGGAGCGTGAAGGTGATATT+TGG | 0.370024 | 1_2:+33070685 | Msa0067780:CDS |
| GGGAAGAGAAGAGGCATTGA+AGG | 0.377729 | 1_2:+33071774 | Msa0067780:CDS |
| AACATCACCTTCACTTTCAT+AGG | 0.384516 | 1_2:-33071452 | None:intergenic |
| GAAGATTGCAAATTGAAGAT+TGG | 0.386030 | 1_2:+33072539 | Msa0067780:CDS |
| TTTGGCTTGGGTAGTAGTTA+TGG | 0.389093 | 1_2:-33071603 | None:intergenic |
| TCGAAATCATGAACTACATA+AGG | 0.397577 | 1_2:+33070363 | Msa0067780:CDS |
| TATTTCTCCACAAATTTCTT+GGG | 0.405795 | 1_2:-33070594 | None:intergenic |
| TTTGCAAAGTCTCTAAAAGA+TGG | 0.419454 | 1_2:+33070729 | Msa0067780:CDS |
| CATTGTGTTTCAGCAGACTT+AGG | 0.419879 | 1_2:+33072231 | Msa0067780:intron |
| TCATCTGCAAGCATTAGATT+TGG | 0.426141 | 1_2:+33071419 | Msa0067780:CDS |
| GACAATTCAAGTTCAAAACT+TGG | 0.430631 | 1_2:-33071155 | None:intergenic |
| GTGACATATTATCAGTCAAC+AGG | 0.441169 | 1_2:+33072482 | Msa0067780:CDS |
| AAATTTGTGGAGTTGACAAA+TGG | 0.443876 | 1_2:+33072437 | Msa0067780:CDS |
| ACTTCCAAATGGTGCTCAAA+AGG | 0.444677 | 1_2:+33070650 | Msa0067780:CDS |
| AAATCTTAACCTTAAAATAT+GGG | 0.446492 | 1_2:-33070782 | None:intergenic |
| GAACAATGACAAGGTTATGA+AGG | 0.451012 | 1_2:+33071723 | Msa0067780:intron |
| AGAGCTTCATGGAAAATTTG+TGG | 0.455759 | 1_2:+33072424 | Msa0067780:CDS |
| GGCAAATGGCTTCCAACCAC+TGG | 0.462531 | 1_2:-33071510 | None:intergenic |
| AATTTGTGGAGTTGACAAAT+GGG | 0.465975 | 1_2:+33072438 | Msa0067780:CDS |
| TATTTGGTTTAAGAGAAATT+GGG | 0.488183 | 1_2:+33070701 | Msa0067780:CDS |
| TTACGCCCATGGCTATACTT+TGG | 0.489114 | 1_2:+33071184 | Msa0067780:CDS |
| AACAACTAGTACTCTAGTAG+TGG | 0.499577 | 1_2:-33072631 | None:intergenic |
| GAGGGTTCCCAAGAAATTTG+TGG | 0.503049 | 1_2:+33070587 | Msa0067780:intron |
| CGAAATCATGAACTACATAA+GGG | 0.505471 | 1_2:+33070364 | Msa0067780:CDS |
| ACAGGATTTAGGTTCTATGC+AGG | 0.511151 | 1_2:+33072500 | Msa0067780:CDS |
| GAGAGGAGGTATGATTAAGA+AGG | 0.513052 | 1_2:+33071088 | Msa0067780:CDS |
| TTCATTGATGAAAGTTGTGA+AGG | 0.513828 | 1_2:+33070846 | Msa0067780:CDS |
| TACTTTGCAGGTAGTAAGAG+AGG | 0.516159 | 1_2:+33071071 | Msa0067780:intron |
| TTTGTGGAGTTGACAAATGG+GGG | 0.523569 | 1_2:+33072440 | Msa0067780:CDS |
| GATTTAGGTTCTATGCAGGT+TGG | 0.523741 | 1_2:+33072504 | Msa0067780:CDS |
| GACTTACCAAAGTATAGCCA+TGG | 0.533080 | 1_2:-33071190 | None:intergenic |
| GTAGTTATGGTGAATGAAAG+TGG | 0.542900 | 1_2:-33071590 | None:intergenic |
| GTAATTCTTAGACTTCCAAA+TGG | 0.548786 | 1_2:+33070639 | Msa0067780:CDS |
| GAGGCATTGAAGGAAGTTCA+AGG | 0.552649 | 1_2:+33071784 | Msa0067780:CDS |
| ACACGAATCTCGATTGTGAT+CGG | 0.556178 | 1_2:-33072270 | None:intergenic |
| GACAATGTTACTAATAGTGC+TGG | 0.567424 | 1_2:+33070903 | Msa0067780:CDS |
| ATTATTCAGCAAAATATCAC+AGG | 0.568492 | 1_2:+33070960 | Msa0067780:CDS |
| ACAACTAGTACTCTAGTAGT+GGG | 0.569352 | 1_2:-33072630 | None:intergenic |
| ATTTGTGGAGTTGACAAATG+GGG | 0.577541 | 1_2:+33072439 | Msa0067780:CDS |
| TCGTGTGAATTCTACTTACC+CGG | 0.579086 | 1_2:+33072287 | Msa0067780:CDS |
| GATGATATTGGGAAGAGAAG+AGG | 0.582027 | 1_2:+33071765 | Msa0067780:CDS |
| TTAGTATTCAAATATTTAGG+TGG | 0.586781 | 1_2:+33070759 | Msa0067780:CDS |
| TATGCTCTTGAAAAGTCACT+TGG | 0.596669 | 1_2:-33071374 | None:intergenic |
| ATAGTGCTGGCACATCTCAA+AGG | 0.602521 | 1_2:+33070916 | Msa0067780:CDS |
| CTTGCATTGTGACCAGTGGT+TGG | 0.607128 | 1_2:+33071498 | Msa0067780:CDS |
| AGTACATACTCGAAAGAACA+TGG | 0.608206 | 1_2:-33071812 | None:intergenic |
| TTGTCACAATCTTACGCCCA+TGG | 0.612713 | 1_2:+33071173 | Msa0067780:CDS |
| TGTGTTTCAGCAGACTTAGG+TGG | 0.616192 | 1_2:+33072234 | Msa0067780:intron |
| TTTGCAGGTAGTAAGAGAGG+AGG | 0.644007 | 1_2:+33071074 | Msa0067780:intron |
| ACTTACCAAAGTATAGCCAT+GGG | 0.659069 | 1_2:-33071189 | None:intergenic |
| ATAACTACTACCCAAGCCAA+AGG | 0.667030 | 1_2:+33071605 | Msa0067780:CDS |
| AGAACTTGCATTGTGACCAG+TGG | 0.689771 | 1_2:+33071494 | Msa0067780:CDS |
| CAACTAGTACTCTAGTAGTG+GGG | 0.703552 | 1_2:-33072629 | None:intergenic |
| GAACATGCCTATGAAAGTGA+AGG | 0.707159 | 1_2:+33071445 | Msa0067780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAAATTATTAGTTATT+TGG | + | chr1_2:33071266-33071285 | Msa0067780:intron | 10.0% |
| !!! | TTTTTTTAAATAAAGTAAGA+AGG | - | chr1_2:33071636-33071655 | None:intergenic | 10.0% |
| !!! | AGTTTTTAGATTTTTTAAAT+AGG | + | chr1_2:33071842-33071861 | Msa0067780:intron | 10.0% |
| !! | ATAAATTATTTAAAAGTTCA+AGG | + | chr1_2:33072037-33072056 | Msa0067780:intron | 10.0% |
| !!! | AACTAGTTTTTTTTTTTAAT+TGG | - | chr1_2:33072064-33072083 | None:intergenic | 10.0% |
| !!! | GTTTTAAATTATTAGTTATT+TGG | + | chr1_2:33071266-33071285 | Msa0067780:intron | 10.0% |
| !!! | TTTTTTTAAATAAAGTAAGA+AGG | - | chr1_2:33071636-33071655 | None:intergenic | 10.0% |
| !!! | AGTTTTTAGATTTTTTAAAT+AGG | + | chr1_2:33071842-33071861 | Msa0067780:intron | 10.0% |
| !! | ATAAATTATTTAAAAGTTCA+AGG | + | chr1_2:33072037-33072056 | Msa0067780:intron | 10.0% |
| !!! | AACTAGTTTTTTTTTTTAAT+TGG | - | chr1_2:33072064-33072083 | None:intergenic | 10.0% |
| !! | ATTATTAACAAATGTATAGT+TGG | - | chr1_2:33070489-33070508 | None:intergenic | 15.0% |
| !! | ACAATAATCATTTATGAATA+AGG | - | chr1_2:33070559-33070578 | None:intergenic | 15.0% |
| !! | AAATCTTAACCTTAAAATAT+GGG | - | chr1_2:33070785-33070804 | None:intergenic | 15.0% |
| !! | AAAATCTTAACCTTAAAATA+TGG | - | chr1_2:33070786-33070805 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATTTT+TGG | + | chr1_2:33070786-33070805 | Msa0067780:CDS | 15.0% |
| !!! | TTCATCAATGAATTTTATAT+TGG | - | chr1_2:33070838-33070857 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTACTTTGC+AGG | + | chr1_2:33071059-33071078 | Msa0067780:intron | 15.0% |
| !!! | GTTCAAATATTATTTTTTGA+AGG | + | chr1_2:33071236-33071255 | Msa0067780:intron | 15.0% |
| !!! | TATAAGTTACTAGTAAATTT+TGG | + | chr1_2:33071306-33071325 | Msa0067780:intron | 15.0% |
| !!! | AACTTGTAAGTTATATTTTT+TGG | - | chr1_2:33071534-33071553 | None:intergenic | 15.0% |
| !! | AAAAAATATAACTTACAAGT+TGG | + | chr1_2:33071533-33071552 | Msa0067780:CDS | 15.0% |
| !! | CAATTGATATTAAACAAATT+TGG | - | chr1_2:33071685-33071704 | None:intergenic | 15.0% |
| !! | ATTATTAACAAATGTATAGT+TGG | - | chr1_2:33070489-33070508 | None:intergenic | 15.0% |
| !! | ACAATAATCATTTATGAATA+AGG | - | chr1_2:33070559-33070578 | None:intergenic | 15.0% |
| !! | AAATCTTAACCTTAAAATAT+GGG | - | chr1_2:33070785-33070804 | None:intergenic | 15.0% |
| !! | AAAATCTTAACCTTAAAATA+TGG | - | chr1_2:33070786-33070805 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATTTT+TGG | + | chr1_2:33070786-33070805 | Msa0067780:CDS | 15.0% |
| !!! | TTCATCAATGAATTTTATAT+TGG | - | chr1_2:33070838-33070857 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTACTTTGC+AGG | + | chr1_2:33071059-33071078 | Msa0067780:intron | 15.0% |
| !!! | GTTCAAATATTATTTTTTGA+AGG | + | chr1_2:33071236-33071255 | Msa0067780:intron | 15.0% |
| !!! | TATAAGTTACTAGTAAATTT+TGG | + | chr1_2:33071306-33071325 | Msa0067780:intron | 15.0% |
| !!! | AACTTGTAAGTTATATTTTT+TGG | - | chr1_2:33071534-33071553 | None:intergenic | 15.0% |
| !! | AAAAAATATAACTTACAAGT+TGG | + | chr1_2:33071533-33071552 | Msa0067780:CDS | 15.0% |
| !! | CAATTGATATTAAACAAATT+TGG | - | chr1_2:33071685-33071704 | None:intergenic | 15.0% |
| !!! | ATATTTGGTTTAAGAGAAAT+TGG | + | chr1_2:33070700-33070719 | Msa0067780:CDS | 20.0% |
| !!! | TATTTGGTTTAAGAGAAATT+GGG | + | chr1_2:33070701-33070720 | Msa0067780:CDS | 20.0% |
| !! | GCTTTAGTATTCAAATATTT+AGG | + | chr1_2:33070756-33070775 | Msa0067780:CDS | 20.0% |
| !! | TTAGTATTCAAATATTTAGG+TGG | + | chr1_2:33070759-33070778 | Msa0067780:CDS | 20.0% |
| !!! | TTGTTATTCTACCTTATATA+TGG | + | chr1_2:33071019-33071038 | Msa0067780:intron | 20.0% |
| !!! | ATCTATTTTAGCCATATATA+AGG | - | chr1_2:33071033-33071052 | None:intergenic | 20.0% |
| !!! | AAGTTATATTTTTTGGCAAA+TGG | - | chr1_2:33071527-33071546 | None:intergenic | 20.0% |
| !!! | ATAACTAGTTTTCTAACATT+AGG | + | chr1_2:33071912-33071931 | Msa0067780:intron | 20.0% |
| !! | TTAACATAATTAATCCTTAC+CGG | - | chr1_2:33072309-33072328 | None:intergenic | 20.0% |
| !! | AGGATTAATTATGTTAAATG+TGG | + | chr1_2:33072312-33072331 | Msa0067780:intron | 20.0% |
| !!! | ATATTTGGTTTAAGAGAAAT+TGG | + | chr1_2:33070700-33070719 | Msa0067780:CDS | 20.0% |
| !!! | TATTTGGTTTAAGAGAAATT+GGG | + | chr1_2:33070701-33070720 | Msa0067780:CDS | 20.0% |
| !! | GCTTTAGTATTCAAATATTT+AGG | + | chr1_2:33070756-33070775 | Msa0067780:CDS | 20.0% |
| !! | TTAGTATTCAAATATTTAGG+TGG | + | chr1_2:33070759-33070778 | Msa0067780:CDS | 20.0% |
| !!! | TTGTTATTCTACCTTATATA+TGG | + | chr1_2:33071019-33071038 | Msa0067780:intron | 20.0% |
| !!! | ATCTATTTTAGCCATATATA+AGG | - | chr1_2:33071033-33071052 | None:intergenic | 20.0% |
| !!! | AAGTTATATTTTTTGGCAAA+TGG | - | chr1_2:33071527-33071546 | None:intergenic | 20.0% |
| !!! | ATAACTAGTTTTCTAACATT+AGG | + | chr1_2:33071912-33071931 | Msa0067780:intron | 20.0% |
| !! | TTAACATAATTAATCCTTAC+CGG | - | chr1_2:33072309-33072328 | None:intergenic | 20.0% |
| !! | AGGATTAATTATGTTAAATG+TGG | + | chr1_2:33072312-33072331 | Msa0067780:intron | 20.0% |
| !! | GATTGTGATTTGTAATTGAA+AGG | - | chr1_2:33070467-33070486 | None:intergenic | 25.0% |
| ! | TATTTCTCCACAAATTTCTT+GGG | - | chr1_2:33070597-33070616 | None:intergenic | 25.0% |
| ! | ATATTTCTCCACAAATTTCT+TGG | - | chr1_2:33070598-33070617 | None:intergenic | 25.0% |
| ! | AGAAATTTGTGGAGAAATAT+TGG | + | chr1_2:33070598-33070617 | Msa0067780:CDS | 25.0% |
| !! | TGCTCAAAAGGAAATATTTT+GGG | + | chr1_2:33070662-33070681 | Msa0067780:CDS | 25.0% |
| ! | ATTATTCAGCAAAATATCAC+AGG | + | chr1_2:33070960-33070979 | Msa0067780:CDS | 25.0% |
| ! | TAAACCTTGAATTGAAATAG+AGG | + | chr1_2:33071348-33071367 | Msa0067780:intron | 25.0% |
| !! | TCTTCTTATGATGATGATAT+TGG | + | chr1_2:33071753-33071772 | Msa0067780:CDS | 25.0% |
| !! | CTTCTTATGATGATGATATT+GGG | + | chr1_2:33071754-33071773 | Msa0067780:CDS | 25.0% |
| ! | ATTTATAATTTAAGAGGGAG+AGG | - | chr1_2:33072023-33072042 | None:intergenic | 25.0% |
| ! | TAACATAATTAATCCTTACC+GGG | - | chr1_2:33072308-33072327 | None:intergenic | 25.0% |
| !! | GATTGTGATTTGTAATTGAA+AGG | - | chr1_2:33070467-33070486 | None:intergenic | 25.0% |
| ! | TATTTCTCCACAAATTTCTT+GGG | - | chr1_2:33070597-33070616 | None:intergenic | 25.0% |
| ! | ATATTTCTCCACAAATTTCT+TGG | - | chr1_2:33070598-33070617 | None:intergenic | 25.0% |
| ! | AGAAATTTGTGGAGAAATAT+TGG | + | chr1_2:33070598-33070617 | Msa0067780:CDS | 25.0% |
| !! | TGCTCAAAAGGAAATATTTT+GGG | + | chr1_2:33070662-33070681 | Msa0067780:CDS | 25.0% |
| ! | ATTATTCAGCAAAATATCAC+AGG | + | chr1_2:33070960-33070979 | Msa0067780:CDS | 25.0% |
| ! | TAAACCTTGAATTGAAATAG+AGG | + | chr1_2:33071348-33071367 | Msa0067780:intron | 25.0% |
| !! | TCTTCTTATGATGATGATAT+TGG | + | chr1_2:33071753-33071772 | Msa0067780:CDS | 25.0% |
| !! | CTTCTTATGATGATGATATT+GGG | + | chr1_2:33071754-33071773 | Msa0067780:CDS | 25.0% |
| ! | ATTTATAATTTAAGAGGGAG+AGG | - | chr1_2:33072023-33072042 | None:intergenic | 25.0% |
| ! | TAACATAATTAATCCTTACC+GGG | - | chr1_2:33072308-33072327 | None:intergenic | 25.0% |
| TCGAAATCATGAACTACATA+AGG | + | chr1_2:33070363-33070382 | Msa0067780:CDS | 30.0% | |
| CGAAATCATGAACTACATAA+GGG | + | chr1_2:33070364-33070383 | Msa0067780:CDS | 30.0% | |
| ATAAGGATATGTAATGCAAC+AGG | - | chr1_2:33070542-33070561 | None:intergenic | 30.0% | |
| AGTCTAAGAATTACTGGATT+TGG | - | chr1_2:33070633-33070652 | None:intergenic | 30.0% | |
| TTTGGAAGTCTAAGAATTAC+TGG | - | chr1_2:33070639-33070658 | None:intergenic | 30.0% | |
| GTAATTCTTAGACTTCCAAA+TGG | + | chr1_2:33070639-33070658 | Msa0067780:CDS | 30.0% | |
| ! | GTGCTCAAAAGGAAATATTT+TGG | + | chr1_2:33070661-33070680 | Msa0067780:CDS | 30.0% |
| !! | TCAAAAGGAAATATTTTGGG+TGG | + | chr1_2:33070665-33070684 | Msa0067780:CDS | 30.0% |
| ! | TTTGCAAAGTCTCTAAAAGA+TGG | + | chr1_2:33070729-33070748 | Msa0067780:CDS | 30.0% |
| !!! | GATTTTTGGTCACAATACAT+TGG | + | chr1_2:33070800-33070819 | Msa0067780:CDS | 30.0% |
| TTCATTGATGAAAGTTGTGA+AGG | + | chr1_2:33070846-33070865 | Msa0067780:CDS | 30.0% | |
| ACATCTCAAAGGAGAAAAAA+CGG | + | chr1_2:33070927-33070946 | Msa0067780:CDS | 30.0% | |
| ! | GACAATTCAAGTTCAAAACT+TGG | - | chr1_2:33071158-33071177 | None:intergenic | 30.0% |
| GTATCCTCTATTTCAATTCA+AGG | - | chr1_2:33071355-33071374 | None:intergenic | 30.0% | |
| AAGTAAGAAGGAAAAACCTT+TGG | - | chr1_2:33071624-33071643 | None:intergenic | 30.0% | |
| TTGTCATTGTTCAAAGGAAT+TGG | - | chr1_2:33071715-33071734 | None:intergenic | 30.0% | |
| AATTCCTTTGAACAATGACA+AGG | + | chr1_2:33071714-33071733 | Msa0067780:intron | 30.0% | |
| ATAACCTTGTCATTGTTCAA+AGG | - | chr1_2:33071721-33071740 | None:intergenic | 30.0% | |
| AAATTTGTGGAGTTGACAAA+TGG | + | chr1_2:33072437-33072456 | Msa0067780:CDS | 30.0% | |
| AATTTGTGGAGTTGACAAAT+GGG | + | chr1_2:33072438-33072457 | Msa0067780:CDS | 30.0% | |
| ATTATCAGTCAACAGGATTT+AGG | + | chr1_2:33072489-33072508 | Msa0067780:CDS | 30.0% | |
| GAAGATTGCAAATTGAAGAT+TGG | + | chr1_2:33072539-33072558 | Msa0067780:CDS | 30.0% | |
| TCGAAATCATGAACTACATA+AGG | + | chr1_2:33070363-33070382 | Msa0067780:CDS | 30.0% | |
| CGAAATCATGAACTACATAA+GGG | + | chr1_2:33070364-33070383 | Msa0067780:CDS | 30.0% | |
| ATAAGGATATGTAATGCAAC+AGG | - | chr1_2:33070542-33070561 | None:intergenic | 30.0% | |
| AGTCTAAGAATTACTGGATT+TGG | - | chr1_2:33070633-33070652 | None:intergenic | 30.0% | |
| TTTGGAAGTCTAAGAATTAC+TGG | - | chr1_2:33070639-33070658 | None:intergenic | 30.0% | |
| GTAATTCTTAGACTTCCAAA+TGG | + | chr1_2:33070639-33070658 | Msa0067780:CDS | 30.0% | |
| ! | GTGCTCAAAAGGAAATATTT+TGG | + | chr1_2:33070661-33070680 | Msa0067780:CDS | 30.0% |
| !! | TCAAAAGGAAATATTTTGGG+TGG | + | chr1_2:33070665-33070684 | Msa0067780:CDS | 30.0% |
| ! | TTTGCAAAGTCTCTAAAAGA+TGG | + | chr1_2:33070729-33070748 | Msa0067780:CDS | 30.0% |
| !!! | GATTTTTGGTCACAATACAT+TGG | + | chr1_2:33070800-33070819 | Msa0067780:CDS | 30.0% |
| TTCATTGATGAAAGTTGTGA+AGG | + | chr1_2:33070846-33070865 | Msa0067780:CDS | 30.0% | |
| ACATCTCAAAGGAGAAAAAA+CGG | + | chr1_2:33070927-33070946 | Msa0067780:CDS | 30.0% | |
| ! | GACAATTCAAGTTCAAAACT+TGG | - | chr1_2:33071158-33071177 | None:intergenic | 30.0% |
| GTATCCTCTATTTCAATTCA+AGG | - | chr1_2:33071355-33071374 | None:intergenic | 30.0% | |
| AAGTAAGAAGGAAAAACCTT+TGG | - | chr1_2:33071624-33071643 | None:intergenic | 30.0% | |
| TTGTCATTGTTCAAAGGAAT+TGG | - | chr1_2:33071715-33071734 | None:intergenic | 30.0% | |
| AATTCCTTTGAACAATGACA+AGG | + | chr1_2:33071714-33071733 | Msa0067780:intron | 30.0% | |
| ATAACCTTGTCATTGTTCAA+AGG | - | chr1_2:33071721-33071740 | None:intergenic | 30.0% | |
| AAATTTGTGGAGTTGACAAA+TGG | + | chr1_2:33072437-33072456 | Msa0067780:CDS | 30.0% | |
| AATTTGTGGAGTTGACAAAT+GGG | + | chr1_2:33072438-33072457 | Msa0067780:CDS | 30.0% | |
| ATTATCAGTCAACAGGATTT+AGG | + | chr1_2:33072489-33072508 | Msa0067780:CDS | 30.0% | |
| GAAGATTGCAAATTGAAGAT+TGG | + | chr1_2:33072539-33072558 | Msa0067780:CDS | 30.0% | |
| ACTATCTTCAAGAACTCTTC+TGG | - | chr1_2:33070343-33070362 | None:intergenic | 35.0% | |
| ATGATTATTGTCTGTTGCAG+AGG | + | chr1_2:33070568-33070587 | Msa0067780:intron | 35.0% | |
| TGATTATTGTCTGTTGCAGA+GGG | + | chr1_2:33070569-33070588 | Msa0067780:intron | 35.0% | |
| ! | ATTTCCTTTTGAGCACCATT+TGG | - | chr1_2:33070657-33070676 | None:intergenic | 35.0% |
| ! | TTTAGGTGGCCCATATTTTA+AGG | + | chr1_2:33070773-33070792 | Msa0067780:CDS | 35.0% |
| GACAATGTTACTAATAGTGC+TGG | + | chr1_2:33070903-33070922 | Msa0067780:CDS | 35.0% | |
| ACTTACCAAAGTATAGCCAT+GGG | - | chr1_2:33071192-33071211 | None:intergenic | 35.0% | |
| TATGCTCTTGAAAAGTCACT+TGG | - | chr1_2:33071377-33071396 | None:intergenic | 35.0% | |
| TCATCTGCAAGCATTAGATT+TGG | + | chr1_2:33071419-33071438 | Msa0067780:CDS | 35.0% | |
| AACATCACCTTCACTTTCAT+AGG | - | chr1_2:33071455-33071474 | None:intergenic | 35.0% | |
| GTAGTTATGGTGAATGAAAG+TGG | - | chr1_2:33071593-33071612 | None:intergenic | 35.0% | |
| GAACAATGACAAGGTTATGA+AGG | + | chr1_2:33071723-33071742 | Msa0067780:intron | 35.0% | |
| AGTACATACTCGAAAGAACA+TGG | - | chr1_2:33071815-33071834 | None:intergenic | 35.0% | |
| ! | AAGAAGCATAAAGAGCTTCA+TGG | + | chr1_2:33072413-33072432 | Msa0067780:CDS | 35.0% |
| AGAGCTTCATGGAAAATTTG+TGG | + | chr1_2:33072424-33072443 | Msa0067780:CDS | 35.0% | |
| ATTTGTGGAGTTGACAAATG+GGG | + | chr1_2:33072439-33072458 | Msa0067780:CDS | 35.0% | |
| GTGACATATTATCAGTCAAC+AGG | + | chr1_2:33072482-33072501 | Msa0067780:CDS | 35.0% | |
| ! | TGCAGGTTGGCAAAAATTTA+AGG | + | chr1_2:33072517-33072536 | Msa0067780:CDS | 35.0% |
| ACTATCTTCAAGAACTCTTC+TGG | - | chr1_2:33070343-33070362 | None:intergenic | 35.0% | |
| ATGATTATTGTCTGTTGCAG+AGG | + | chr1_2:33070568-33070587 | Msa0067780:intron | 35.0% | |
| TGATTATTGTCTGTTGCAGA+GGG | + | chr1_2:33070569-33070588 | Msa0067780:intron | 35.0% | |
| ! | ATTTCCTTTTGAGCACCATT+TGG | - | chr1_2:33070657-33070676 | None:intergenic | 35.0% |
| ! | TTTAGGTGGCCCATATTTTA+AGG | + | chr1_2:33070773-33070792 | Msa0067780:CDS | 35.0% |
| GACAATGTTACTAATAGTGC+TGG | + | chr1_2:33070903-33070922 | Msa0067780:CDS | 35.0% | |
| ACTTACCAAAGTATAGCCAT+GGG | - | chr1_2:33071192-33071211 | None:intergenic | 35.0% | |
| TATGCTCTTGAAAAGTCACT+TGG | - | chr1_2:33071377-33071396 | None:intergenic | 35.0% | |
| TCATCTGCAAGCATTAGATT+TGG | + | chr1_2:33071419-33071438 | Msa0067780:CDS | 35.0% | |
| AACATCACCTTCACTTTCAT+AGG | - | chr1_2:33071455-33071474 | None:intergenic | 35.0% | |
| GTAGTTATGGTGAATGAAAG+TGG | - | chr1_2:33071593-33071612 | None:intergenic | 35.0% | |
| GAACAATGACAAGGTTATGA+AGG | + | chr1_2:33071723-33071742 | Msa0067780:intron | 35.0% | |
| AGTACATACTCGAAAGAACA+TGG | - | chr1_2:33071815-33071834 | None:intergenic | 35.0% | |
| ! | AAGAAGCATAAAGAGCTTCA+TGG | + | chr1_2:33072413-33072432 | Msa0067780:CDS | 35.0% |
| AGAGCTTCATGGAAAATTTG+TGG | + | chr1_2:33072424-33072443 | Msa0067780:CDS | 35.0% | |
| ATTTGTGGAGTTGACAAATG+GGG | + | chr1_2:33072439-33072458 | Msa0067780:CDS | 35.0% | |
| GTGACATATTATCAGTCAAC+AGG | + | chr1_2:33072482-33072501 | Msa0067780:CDS | 35.0% | |
| ! | TGCAGGTTGGCAAAAATTTA+AGG | + | chr1_2:33072517-33072536 | Msa0067780:CDS | 35.0% |
| ACTTCCAAATGGTGCTCAAA+AGG | + | chr1_2:33070650-33070669 | Msa0067780:CDS | 40.0% | |
| TACTTTGCAGGTAGTAAGAG+AGG | + | chr1_2:33071071-33071090 | Msa0067780:intron | 40.0% | |
| ! | GAGAGGAGGTATGATTAAGA+AGG | + | chr1_2:33071088-33071107 | Msa0067780:CDS | 40.0% |
| GACTTACCAAAGTATAGCCA+TGG | - | chr1_2:33071193-33071212 | None:intergenic | 40.0% | |
| TGCTTGCAGATGACACTTTA+AGG | - | chr1_2:33071412-33071431 | None:intergenic | 40.0% | |
| GAACATGCCTATGAAAGTGA+AGG | + | chr1_2:33071445-33071464 | Msa0067780:CDS | 40.0% | |
| !! | TTTGGCTTGGGTAGTAGTTA+TGG | - | chr1_2:33071606-33071625 | None:intergenic | 40.0% |
| ATAACTACTACCCAAGCCAA+AGG | + | chr1_2:33071605-33071624 | Msa0067780:CDS | 40.0% | |
| ! | GAAGGAAAAACCTTTGGCTT+GGG | - | chr1_2:33071618-33071637 | None:intergenic | 40.0% |
| AGAAGGAAAAACCTTTGGCT+TGG | - | chr1_2:33071619-33071638 | None:intergenic | 40.0% | |
| GATGATATTGGGAAGAGAAG+AGG | + | chr1_2:33071765-33071784 | Msa0067780:CDS | 40.0% | |
| CATTGTGTTTCAGCAGACTT+AGG | + | chr1_2:33072231-33072250 | Msa0067780:intron | 40.0% | |
| ACACGAATCTCGATTGTGAT+CGG | - | chr1_2:33072273-33072292 | None:intergenic | 40.0% | |
| TCGTGTGAATTCTACTTACC+CGG | + | chr1_2:33072287-33072306 | Msa0067780:CDS | 40.0% | |
| TGAATTCTACTTACCCGGTA+AGG | + | chr1_2:33072292-33072311 | Msa0067780:intron | 40.0% | |
| TTTGTGGAGTTGACAAATGG+GGG | + | chr1_2:33072440-33072459 | Msa0067780:CDS | 40.0% | |
| TGACAAATGGGGGAAAATCA+TGG | + | chr1_2:33072450-33072469 | Msa0067780:CDS | 40.0% | |
| AAATGGGGGAAAATCATGGT+TGG | + | chr1_2:33072454-33072473 | Msa0067780:CDS | 40.0% | |
| ! | ACAGGATTTAGGTTCTATGC+AGG | + | chr1_2:33072500-33072519 | Msa0067780:CDS | 40.0% |
| ! | GATTTAGGTTCTATGCAGGT+TGG | + | chr1_2:33072504-33072523 | Msa0067780:CDS | 40.0% |
| ACTTCCAAATGGTGCTCAAA+AGG | + | chr1_2:33070650-33070669 | Msa0067780:CDS | 40.0% | |
| TACTTTGCAGGTAGTAAGAG+AGG | + | chr1_2:33071071-33071090 | Msa0067780:intron | 40.0% | |
| ! | GAGAGGAGGTATGATTAAGA+AGG | + | chr1_2:33071088-33071107 | Msa0067780:CDS | 40.0% |
| GACTTACCAAAGTATAGCCA+TGG | - | chr1_2:33071193-33071212 | None:intergenic | 40.0% | |
| TGCTTGCAGATGACACTTTA+AGG | - | chr1_2:33071412-33071431 | None:intergenic | 40.0% | |
| GAACATGCCTATGAAAGTGA+AGG | + | chr1_2:33071445-33071464 | Msa0067780:CDS | 40.0% | |
| !! | TTTGGCTTGGGTAGTAGTTA+TGG | - | chr1_2:33071606-33071625 | None:intergenic | 40.0% |
| ATAACTACTACCCAAGCCAA+AGG | + | chr1_2:33071605-33071624 | Msa0067780:CDS | 40.0% | |
| ! | GAAGGAAAAACCTTTGGCTT+GGG | - | chr1_2:33071618-33071637 | None:intergenic | 40.0% |
| AGAAGGAAAAACCTTTGGCT+TGG | - | chr1_2:33071619-33071638 | None:intergenic | 40.0% | |
| GATGATATTGGGAAGAGAAG+AGG | + | chr1_2:33071765-33071784 | Msa0067780:CDS | 40.0% | |
| CATTGTGTTTCAGCAGACTT+AGG | + | chr1_2:33072231-33072250 | Msa0067780:intron | 40.0% | |
| ACACGAATCTCGATTGTGAT+CGG | - | chr1_2:33072273-33072292 | None:intergenic | 40.0% | |
| TCGTGTGAATTCTACTTACC+CGG | + | chr1_2:33072287-33072306 | Msa0067780:CDS | 40.0% | |
| TGAATTCTACTTACCCGGTA+AGG | + | chr1_2:33072292-33072311 | Msa0067780:intron | 40.0% | |
| TTTGTGGAGTTGACAAATGG+GGG | + | chr1_2:33072440-33072459 | Msa0067780:CDS | 40.0% | |
| TGACAAATGGGGGAAAATCA+TGG | + | chr1_2:33072450-33072469 | Msa0067780:CDS | 40.0% | |
| AAATGGGGGAAAATCATGGT+TGG | + | chr1_2:33072454-33072473 | Msa0067780:CDS | 40.0% | |
| ! | ACAGGATTTAGGTTCTATGC+AGG | + | chr1_2:33072500-33072519 | Msa0067780:CDS | 40.0% |
| ! | GATTTAGGTTCTATGCAGGT+TGG | + | chr1_2:33072504-33072523 | Msa0067780:CDS | 40.0% |
| GAGGGTTCCCAAGAAATTTG+TGG | + | chr1_2:33070587-33070606 | Msa0067780:intron | 45.0% | |
| !! | ATATTTTGGGTGGAGCGTGA+AGG | + | chr1_2:33070675-33070694 | Msa0067780:CDS | 45.0% |
| TGGAGCGTGAAGGTGATATT+TGG | + | chr1_2:33070685-33070704 | Msa0067780:CDS | 45.0% | |
| !! | ATAGTGCTGGCACATCTCAA+AGG | + | chr1_2:33070916-33070935 | Msa0067780:CDS | 45.0% |
| TTTGCAGGTAGTAAGAGAGG+AGG | + | chr1_2:33071074-33071093 | Msa0067780:intron | 45.0% | |
| TTGTCACAATCTTACGCCCA+TGG | + | chr1_2:33071173-33071192 | Msa0067780:CDS | 45.0% | |
| TTACGCCCATGGCTATACTT+TGG | + | chr1_2:33071184-33071203 | Msa0067780:CDS | 45.0% | |
| AGAACTTGCATTGTGACCAG+TGG | + | chr1_2:33071494-33071513 | Msa0067780:CDS | 45.0% | |
| !! | GAGGCATTGAAGGAAGTTCA+AGG | + | chr1_2:33071784-33071803 | Msa0067780:CDS | 45.0% |
| TGTGTTTCAGCAGACTTAGG+TGG | + | chr1_2:33072234-33072253 | Msa0067780:intron | 45.0% | |
| GAGGGTTCCCAAGAAATTTG+TGG | + | chr1_2:33070587-33070606 | Msa0067780:intron | 45.0% | |
| !! | ATATTTTGGGTGGAGCGTGA+AGG | + | chr1_2:33070675-33070694 | Msa0067780:CDS | 45.0% |
| TGGAGCGTGAAGGTGATATT+TGG | + | chr1_2:33070685-33070704 | Msa0067780:CDS | 45.0% | |
| !! | ATAGTGCTGGCACATCTCAA+AGG | + | chr1_2:33070916-33070935 | Msa0067780:CDS | 45.0% |
| TTTGCAGGTAGTAAGAGAGG+AGG | + | chr1_2:33071074-33071093 | Msa0067780:intron | 45.0% | |
| TTGTCACAATCTTACGCCCA+TGG | + | chr1_2:33071173-33071192 | Msa0067780:CDS | 45.0% | |
| TTACGCCCATGGCTATACTT+TGG | + | chr1_2:33071184-33071203 | Msa0067780:CDS | 45.0% | |
| AGAACTTGCATTGTGACCAG+TGG | + | chr1_2:33071494-33071513 | Msa0067780:CDS | 45.0% | |
| !! | GAGGCATTGAAGGAAGTTCA+AGG | + | chr1_2:33071784-33071803 | Msa0067780:CDS | 45.0% |
| TGTGTTTCAGCAGACTTAGG+TGG | + | chr1_2:33072234-33072253 | Msa0067780:intron | 45.0% | |
| !!! | TTTTGAATTTATAATAATTT+AGG | + | chr1_2:33071973-33071992 | Msa0067780:intron | 5.0% |
| !! | AAATAATTTATAATTTAAGA+GGG | - | chr1_2:33072028-33072047 | None:intergenic | 5.0% |
| !! | TAAATAATTTATAATTTAAG+AGG | - | chr1_2:33072029-33072048 | None:intergenic | 5.0% |
| !!! | TTTTGAATTTATAATAATTT+AGG | + | chr1_2:33071973-33071992 | Msa0067780:intron | 5.0% |
| !! | AAATAATTTATAATTTAAGA+GGG | - | chr1_2:33072028-33072047 | None:intergenic | 5.0% |
| !! | TAAATAATTTATAATTTAAG+AGG | - | chr1_2:33072029-33072048 | None:intergenic | 5.0% |
| CTTGCATTGTGACCAGTGGT+TGG | + | chr1_2:33071498-33071517 | Msa0067780:CDS | 50.0% | |
| !! | GGGAAGAGAAGAGGCATTGA+AGG | + | chr1_2:33071774-33071793 | Msa0067780:CDS | 50.0% |
| CTTGCATTGTGACCAGTGGT+TGG | + | chr1_2:33071498-33071517 | Msa0067780:CDS | 50.0% | |
| !! | GGGAAGAGAAGAGGCATTGA+AGG | + | chr1_2:33071774-33071793 | Msa0067780:CDS | 50.0% |
| GGCAAATGGCTTCCAACCAC+TGG | - | chr1_2:33071513-33071532 | None:intergenic | 55.0% | |
| GGCAAATGGCTTCCAACCAC+TGG | - | chr1_2:33071513-33071532 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33070325 | 33072640 | 33070325 | ID=Msa0067780;Name=Msa0067780 |
| chr1_2 | mRNA | 33070325 | 33072640 | 33070325 | ID=Msa0067780-mRNA-1;Parent=Msa0067780;Name=Msa0067780-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|7|0|416 |
| chr1_2 | exon | 33070325 | 33070393 | 33070325 | ID=Msa0067780-mRNA-1:exon:10835;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33070588 | 33070981 | 33070588 | ID=Msa0067780-mRNA-1:exon:10836;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33071081 | 33071205 | 33071081 | ID=Msa0067780-mRNA-1:exon:10837;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33071368 | 33071626 | 33071368 | ID=Msa0067780-mRNA-1:exon:10838;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33071736 | 33071825 | 33071736 | ID=Msa0067780-mRNA-1:exon:10839;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33072244 | 33072308 | 33072244 | ID=Msa0067780-mRNA-1:exon:10840;Parent=Msa0067780-mRNA-1 |
| chr1_2 | exon | 33072392 | 33072640 | 33072392 | ID=Msa0067780-mRNA-1:exon:10841;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33070325 | 33070393 | 33070325 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33070588 | 33070981 | 33070588 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33071081 | 33071205 | 33071081 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33071368 | 33071626 | 33071368 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33071736 | 33071825 | 33071736 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33072244 | 33072308 | 33072244 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| chr1_2 | CDS | 33072392 | 33072640 | 33072392 | ID=Msa0067780-mRNA-1:cds;Parent=Msa0067780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
