Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067950 | KEH26464.1 | 69.133 | 473 | 92 | 6 | 8 | 435 | 7 | 470 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067950 | sp|Q8L3W1|VRN1_ARATH | 24.551 | 334 | 215 | 12 | 19 | 321 | 6 | 333 | 1.43e-18 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067950 | A0A072U9K2 | 69.133 | 473 | 92 | 6 | 8 | 435 | 7 | 470 | 0.0 | 634 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0067950 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067950 | MtrunA17_Chr6g0476171 | 76.016 | 246 | 54 | 3 | 193 | 435 | 2 | 245 | 7.36e-131 | 377 |
| Msa0067950 | MtrunA17_Chr1g0163141 | 91.975 | 162 | 13 | 0 | 31 | 192 | 7 | 168 | 1.63e-99 | 295 |
| Msa0067950 | MtrunA17_Chr6g0476181 | 79.245 | 159 | 26 | 1 | 34 | 192 | 1 | 152 | 4.88e-83 | 252 |
| Msa0067950 | MtrunA17_Chr1g0163131 | 45.401 | 337 | 139 | 11 | 1 | 323 | 1 | 306 | 3.13e-81 | 253 |
| Msa0067950 | MtrunA17_Chr1g0163131 | 34.615 | 130 | 82 | 2 | 306 | 435 | 180 | 306 | 9.29e-15 | 74.7 |
| Msa0067950 | MtrunA17_Chr1g0163101 | 63.830 | 188 | 45 | 3 | 5 | 192 | 5 | 169 | 1.31e-76 | 236 |
| Msa0067950 | MtrunA17_Chr1g0163181 | 32.273 | 440 | 242 | 11 | 28 | 435 | 14 | 429 | 1.17e-66 | 219 |
| Msa0067950 | MtrunA17_Chr1g0162161 | 65.409 | 159 | 36 | 2 | 34 | 192 | 3 | 142 | 3.36e-65 | 206 |
| Msa0067950 | MtrunA17_Chr1g0163201 | 34.129 | 419 | 213 | 12 | 35 | 435 | 19 | 392 | 1.80e-63 | 210 |
| Msa0067950 | MtrunA17_Chr1g0163261 | 38.700 | 323 | 155 | 10 | 19 | 335 | 9 | 294 | 8.73e-57 | 189 |
| Msa0067950 | MtrunA17_Chr1g0163081 | 61.783 | 157 | 36 | 3 | 34 | 190 | 5 | 137 | 2.15e-55 | 180 |
| Msa0067950 | MtrunA17_Chr1g0163231 | 40.984 | 305 | 135 | 10 | 23 | 322 | 13 | 277 | 1.21e-54 | 183 |
| Msa0067950 | MtrunA17_Chr1g0163251 | 40.000 | 310 | 152 | 9 | 28 | 335 | 14 | 291 | 3.07e-54 | 185 |
| Msa0067950 | MtrunA17_Chr1g0163161 | 61.644 | 146 | 37 | 3 | 47 | 192 | 1 | 127 | 5.81e-52 | 171 |
| Msa0067950 | MtrunA17_Chr1g0163121 | 57.500 | 160 | 38 | 3 | 33 | 192 | 9 | 138 | 2.60e-51 | 169 |
| Msa0067950 | MtrunA17_Chr1g0171611 | 34.983 | 303 | 144 | 8 | 23 | 322 | 13 | 265 | 1.36e-45 | 159 |
| Msa0067950 | MtrunA17_Chr1g0163151 | 39.269 | 219 | 126 | 5 | 217 | 435 | 10 | 221 | 2.53e-42 | 149 |
| Msa0067950 | MtrunA17_Chr1g0163111 | 37.668 | 223 | 124 | 7 | 222 | 435 | 12 | 228 | 7.52e-38 | 137 |
| Msa0067950 | MtrunA17_Chr1g0162151 | 38.426 | 216 | 95 | 7 | 225 | 434 | 23 | 206 | 1.75e-36 | 133 |
| Msa0067950 | MtrunA17_Chr3g0131891 | 30.650 | 323 | 185 | 11 | 13 | 326 | 13 | 305 | 5.96e-32 | 124 |
| Msa0067950 | MtrunA17_Chr7g0233561 | 31.098 | 328 | 189 | 9 | 12 | 326 | 11 | 314 | 8.54e-31 | 120 |
| Msa0067950 | MtrunA17_Chr1g0163221 | 24.460 | 417 | 237 | 11 | 13 | 424 | 5 | 348 | 1.44e-30 | 120 |
| Msa0067950 | MtrunA17_Chr1g0163091 | 41.714 | 175 | 87 | 8 | 201 | 371 | 1 | 164 | 5.39e-28 | 108 |
| Msa0067950 | MtrunA17_Chr4g0067431 | 26.113 | 337 | 221 | 10 | 9 | 335 | 5 | 323 | 2.24e-27 | 111 |
| Msa0067950 | MtrunA17_Chr7g0233531 | 29.431 | 299 | 171 | 8 | 34 | 326 | 1 | 265 | 7.07e-27 | 108 |
| Msa0067950 | MtrunA17_Chr7g0233541 | 27.759 | 299 | 193 | 6 | 34 | 326 | 1 | 282 | 1.19e-25 | 105 |
| Msa0067950 | MtrunA17_Chr3g0103171 | 30.667 | 300 | 157 | 13 | 35 | 323 | 6 | 265 | 1.74e-24 | 102 |
| Msa0067950 | MtrunA17_Chr1g0208771 | 26.510 | 298 | 199 | 9 | 35 | 328 | 13 | 294 | 3.51e-24 | 104 |
| Msa0067950 | MtrunA17_Chr1g0163241 | 38.931 | 131 | 71 | 2 | 35 | 164 | 23 | 145 | 2.25e-23 | 96.3 |
| Msa0067950 | MtrunA17_Chr7g0233521 | 27.181 | 298 | 179 | 7 | 34 | 326 | 1 | 265 | 6.54e-23 | 97.8 |
| Msa0067950 | MtrunA17_Chr1g0163071 | 26.299 | 308 | 199 | 9 | 34 | 329 | 1 | 292 | 2.94e-22 | 96.7 |
| Msa0067950 | MtrunA17_Chr1g0163191 | 41.667 | 108 | 61 | 2 | 28 | 133 | 14 | 121 | 1.01e-20 | 88.6 |
| Msa0067950 | MtrunA17_Chr3g0103181 | 28.221 | 326 | 173 | 14 | 10 | 323 | 3 | 279 | 2.66e-20 | 90.5 |
| Msa0067950 | MtrunA17_Chr1g0154111 | 22.348 | 443 | 270 | 14 | 17 | 421 | 24 | 430 | 3.30e-20 | 93.2 |
| Msa0067950 | MtrunA17_Chr8g0390841 | 26.646 | 319 | 197 | 13 | 17 | 323 | 37 | 330 | 1.15e-19 | 91.3 |
| Msa0067950 | MtrunA17_Chr5g0419201 | 34.559 | 136 | 84 | 3 | 19 | 149 | 16 | 151 | 1.48e-19 | 86.3 |
| Msa0067950 | MtrunA17_Chr7g0233571 | 30.043 | 233 | 135 | 6 | 18 | 242 | 9 | 221 | 1.05e-18 | 84.7 |
| Msa0067950 | MtrunA17_Chr3g0103151 | 36.691 | 139 | 76 | 5 | 17 | 152 | 10 | 139 | 2.45e-17 | 79.0 |
| Msa0067950 | MtrunA17_Chr3g0103191 | 30.000 | 240 | 131 | 12 | 10 | 245 | 3 | 209 | 1.39e-15 | 76.3 |
| Msa0067950 | MtrunA17_Chr6g0467351 | 38.835 | 103 | 59 | 3 | 16 | 114 | 12 | 114 | 1.84e-15 | 75.5 |
| Msa0067950 | MtrunA17_Chr1g0154131 | 25.430 | 291 | 178 | 13 | 31 | 310 | 194 | 456 | 2.43e-15 | 77.8 |
| Msa0067950 | MtrunA17_Chr1g0163061 | 39.806 | 103 | 58 | 2 | 16 | 114 | 12 | 114 | 7.37e-15 | 74.7 |
| Msa0067950 | MtrunA17_Chr3g0077411 | 23.457 | 324 | 168 | 12 | 15 | 323 | 258 | 516 | 1.29e-13 | 72.8 |
| Msa0067950 | MtrunA17_Chr3g0103201 | 30.159 | 252 | 133 | 14 | 77 | 322 | 5 | 219 | 3.54e-13 | 68.6 |
| Msa0067950 | MtrunA17_Chr5g0419211 | 34.783 | 92 | 59 | 1 | 244 | 335 | 11 | 101 | 1.95e-12 | 63.5 |
| Msa0067950 | MtrunA17_Chr1g0154191 | 22.156 | 334 | 209 | 11 | 17 | 310 | 20 | 342 | 2.05e-12 | 68.2 |
| Msa0067950 | MtrunA17_Chr1g0154071 | 24.138 | 348 | 228 | 12 | 12 | 330 | 150 | 490 | 2.07e-12 | 68.9 |
| Msa0067950 | MtrunA17_Chr1g0154101 | 24.146 | 439 | 273 | 18 | 18 | 423 | 178 | 589 | 3.81e-12 | 68.6 |
| Msa0067950 | MtrunA17_Chr3g0077461 | 35.000 | 100 | 62 | 2 | 18 | 114 | 236 | 335 | 9.57e-12 | 66.6 |
| Msa0067950 | MtrunA17_Chr1g0154171 | 23.529 | 323 | 206 | 13 | 17 | 310 | 21 | 331 | 1.22e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067950 | AT3G18990.1 | 24.551 | 334 | 215 | 12 | 19 | 321 | 6 | 333 | 1.46e-19 | 89.7 |
| Msa0067950 | AT3G18990.2 | 24.551 | 334 | 215 | 12 | 19 | 321 | 6 | 333 | 2.40e-19 | 89.7 |
| Msa0067950 | AT4G33280.1 | 27.640 | 322 | 195 | 17 | 18 | 323 | 19 | 318 | 1.49e-14 | 75.1 |
Find 75 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCCATTTGGAAGTTTA+AGG | 0.139491 | 1_2:+33280539 | Msa0067940:intron |
| TTTGGAAGTTTAAGGGATAT+TGG | 0.281020 | 1_2:+33280547 | Msa0067940:intron |
| TGCAACGCGGTGATGGTATT+TGG | 0.284893 | 1_2:-33280498 | Msa0067950:CDS |
| AGTTTAAGGGATATTGGATT+TGG | 0.337634 | 1_2:+33280553 | Msa0067940:intron |
| CTCCGGGCCTGGTTCCTTTG+TGG | 0.344484 | 1_2:+33279071 | Msa0067940:intron |
| GGAATTTCGTAGAGAGGTAT+TGG | 0.365580 | 1_2:-33280585 | Msa0067950:CDS |
| TTATCACCTTCAACATGATA+TGG | 0.368518 | 1_2:+33279717 | Msa0067940:intron |
| AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 1_2:-33277226 | Msa0067950:CDS |
| GGCCTGGTTCCTTTGTGGTT+GGG | 0.379936 | 1_2:+33279076 | Msa0067940:intron |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 1_2:+33280419 | Msa0067940:intron |
| ATGGTATTTGGCTTCAGAAT+TGG | 0.387348 | 1_2:-33280486 | Msa0067950:CDS |
| TATAATGAACATCTCGACTA+TGG | 0.388378 | 1_2:-33277151 | Msa0067950:CDS |
| GGGCCTGGTTCCTTTGTGGT+TGG | 0.394485 | 1_2:+33279075 | Msa0067940:intron |
| GGTCAGCATGCAAAATGAAT+TGG | 0.396575 | 1_2:-33280522 | Msa0067950:CDS |
| TGACCCATTTGGAAGTTTAA+GGG | 0.399923 | 1_2:+33280540 | Msa0067940:intron |
| CCTTGAAACTTCTCCGGGCC+TGG | 0.411612 | 1_2:+33279060 | Msa0067940:intron |
| AACCACAAAGGAACCAGGCC+CGG | 0.431169 | 1_2:-33279073 | Msa0067950:CDS |
| ATTCAGTGGAGTTGAGAGTA+GGG | 0.448522 | 1_2:-33277201 | Msa0067950:CDS |
| ATATCCCTTAAACTTCCAAA+TGG | 0.449227 | 1_2:-33280544 | Msa0067950:CDS |
| GCAATACCTTGAAACTTCTC+CGG | 0.461040 | 1_2:+33279054 | Msa0067940:intron |
| TGCTTCTTCAACAGCTCACT+TGG | 0.461685 | 1_2:+33277241 | Msa0067940:intron |
| GAATTTACATGAGATGTTCA+AGG | 0.464486 | 1_2:-33277382 | Msa0067950:CDS |
| ATAGTAATTGTGAATGAAAG+TGG | 0.468831 | 1_2:+33279102 | Msa0067940:intron |
| GACTATGGTTGGTTCACTAA+AGG | 0.474605 | 1_2:-33277136 | Msa0067950:CDS |
| TACCTCTCTACGAAATTCCT+TGG | 0.476007 | 1_2:+33280589 | Msa0067940:intron |
| AAGGAACATGAGTTGAAAGT+TGG | 0.478819 | 1_2:-33279159 | Msa0067950:CDS |
| TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 1_2:-33277189 | Msa0067950:CDS |
| TTATCGCCATATCATGTTGA+AGG | 0.488274 | 1_2:-33279723 | Msa0067950:CDS |
| AGTGAAACTAGGACTCTCAT+TGG | 0.512039 | 1_2:+33279752 | Msa0067940:intron |
| AGTAGCAATGCCATTTGAGT+TGG | 0.513443 | 1_2:+33280216 | Msa0067940:intron |
| TTCGAAAACCAACTAGGTAT+CGG | 0.513588 | 1_2:+33279318 | Msa0067940:intron |
| AGAGATTGCAAAGTAAAGAC+TGG | 0.515563 | 1_2:-33277097 | Msa0067950:CDS |
| AATTCAGTGGAGTTGAGAGT+AGG | 0.518002 | 1_2:-33277202 | Msa0067950:CDS |
| TGTTGAAGGTGATAATAGAT+TGG | 0.520882 | 1_2:-33279709 | Msa0067950:intron |
| TATCCCTTAAACTTCCAAAT+GGG | 0.521322 | 1_2:-33280543 | Msa0067950:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1_2:-33277047 | Msa0067950:CDS |
| TATTCTTTCGAAAACCAACT+AGG | 0.522446 | 1_2:+33279312 | Msa0067940:intron |
| CCAGGCCCGGAGAAGTTTCA+AGG | 0.523708 | 1_2:-33279060 | Msa0067950:intron |
| CAATACCTTGAAACTTCTCC+GGG | 0.525380 | 1_2:+33279055 | Msa0067940:intron |
| TAATGGAAACACAGGAGGCA+TGG | 0.525975 | 1_2:-33279832 | Msa0067950:CDS |
| TTCAGTGGAGTTGAGAGTAG+GGG | 0.529294 | 1_2:-33277200 | Msa0067950:CDS |
| TGAAACAGCCGATACCTAGT+TGG | 0.537742 | 1_2:-33279326 | Msa0067950:intron |
| AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 1_2:-33279267 | Msa0067950:CDS |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1_2:-33279291 | Msa0067950:CDS |
| ATGAACATCTCGACTATGGT+TGG | 0.544359 | 1_2:-33277147 | Msa0067950:CDS |
| GTCAGCATGCAAAATGAATT+GGG | 0.544595 | 1_2:-33280521 | Msa0067950:CDS |
| GTGAAACTAGGACTCTCATT+GGG | 0.547777 | 1_2:+33279753 | Msa0067940:intron |
| TATATTTAGTGGAAATTCAG+TGG | 0.549056 | 1_2:-33277215 | Msa0067950:CDS |
| AATGGAAACACAGGAGGCAT+GGG | 0.555197 | 1_2:-33279831 | Msa0067950:CDS |
| ACTACTGCTGCTACACCTCA+AGG | 0.557213 | 1_2:-33280196 | Msa0067950:CDS |
| ATCCCAACCACAAAGGAACC+AGG | 0.559337 | 1_2:-33279078 | Msa0067950:CDS |
| TTTGGCTTCAGAATTGGAAG+AGG | 0.566576 | 1_2:-33280480 | Msa0067950:CDS |
| GATAATTTGACAGTGAAACT+AGG | 0.566923 | 1_2:+33279741 | Msa0067940:intron |
| AGAATTGGAAGAGGTTTGCA+TGG | 0.571811 | 1_2:-33280471 | Msa0067950:CDS |
| ATGGTTGGTTCACTAAAGGT+TGG | 0.573713 | 1_2:-33277132 | Msa0067950:CDS |
| TTGTGAATGTTAGTCCCTTG+AGG | 0.580089 | 1_2:+33280181 | Msa0067940:intron |
| AATTGGGTGCAACGCGGTGA+TGG | 0.587564 | 1_2:-33280505 | Msa0067950:CDS |
| TGTGCTTGCAGATGATTCCA+AGG | 0.587783 | 1_2:-33280606 | Msa0067950:intron |
| AACAATTAGAAGTGTTGGTG+AGG | 0.601806 | 1_2:-33279262 | Msa0067950:CDS |
| TTTGCATGGTCGCTCCGATG+TGG | 0.602338 | 1_2:-33280457 | Msa0067950:CDS |
| TTCCAAGGAATTTCGTAGAG+AGG | 0.604264 | 1_2:-33280591 | Msa0067950:CDS |
| GAGCGTGGTAGTGAAGCTAA+AGG | 0.613987 | 1_2:-33281410 | Msa0067950:CDS |
| AGTGAGCTGTTGAAGAAGCA+TGG | 0.617628 | 1_2:-33277238 | Msa0067950:CDS |
| TACTATTATCCCAACCACAA+AGG | 0.624953 | 1_2:-33279085 | Msa0067950:CDS |
| GCAGACGCTAATGGAAACAC+AGG | 0.632802 | 1_2:-33279840 | Msa0067950:intron |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1_2:-33279286 | Msa0067950:CDS |
| GTGGAGTTGAGAGTAGGGGA+AGG | 0.647557 | 1_2:-33277196 | Msa0067950:CDS |
| GAACAACACGGCAATGAGCG+TGG | 0.647962 | 1_2:-33281425 | Msa0067950:CDS |
| CTACTGCTGCTACACCTCAA+GGG | 0.654975 | 1_2:-33280195 | Msa0067950:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1_2:-33279290 | Msa0067950:CDS |
| GACGCTAATGGAAACACAGG+AGG | 0.691601 | 1_2:-33279837 | Msa0067950:CDS |
| AAACTAAAAGATCTCCACAT+CGG | 0.700040 | 1_2:+33280443 | Msa0067940:intron |
| GTGTTGGTGAGGACAGTGCA+TGG | 0.718576 | 1_2:-33279251 | Msa0067950:CDS |
| AGCATGTGGTTTGAACAACA+CGG | 0.751745 | 1_2:-33281437 | Msa0067950:CDS |
| AAAATGAATTGGGTGCAACG+CGG | 0.811094 | 1_2:-33280511 | Msa0067950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTATTGAATAATAAAAAT+GGG | + | chr1_2:33277294-33277313 | Msa0067940:intron | 10.0% |
| !! | AGTTTATTGAATAATAAAAA+TGG | + | chr1_2:33277295-33277314 | Msa0067940:intron | 10.0% |
| !! | TGTTTGTAATAAATTAATTA+AGG | + | chr1_2:33280084-33280103 | Msa0067940:intron | 10.0% |
| !!! | TAAAATATACAAATTTTTCA+AGG | - | chr1_2:33280631-33280650 | Msa0067950:intron | 10.0% |
| !! | TAAACAGATGAATAAATAAA+AGG | + | chr1_2:33278369-33278388 | Msa0067940:intron | 15.0% |
| !! | TTTATTTATTCATCTGTTTA+TGG | - | chr1_2:33278369-33278388 | Msa0067950:intron | 15.0% |
| !! | TTATTTATTCATCTGTTTAT+GGG | - | chr1_2:33278370-33278389 | Msa0067950:intron | 15.0% |
| !!! | CAAATGTGTAAAATATTTTA+AGG | - | chr1_2:33279547-33279566 | Msa0067950:intron | 15.0% |
| !!! | ATATTTTAAGGTTTAAATCT+TGG | - | chr1_2:33279559-33279578 | Msa0067950:intron | 15.0% |
| !!! | CTATTTTATTTTACAGTTAT+TGG | + | chr1_2:33280448-33280467 | Msa0067940:intron | 15.0% |
| !!! | CTAAGATTAATTTTTATACA+TGG | - | chr1_2:33280690-33280709 | Msa0067950:intron | 15.0% |
| !! | ACAGATACTAATACATAAAT+GGG | + | chr1_2:33277171-33277190 | Msa0067940:intron | 20.0% |
| !! | TACAGATACTAATACATAAA+TGG | + | chr1_2:33277172-33277191 | Msa0067940:intron | 20.0% |
| !! | TCAAATGCTATATATTCTAT+TGG | - | chr1_2:33277391-33277410 | Msa0067950:CDS | 20.0% |
| !! | TACGGATTTATTATCATTAA+TGG | - | chr1_2:33277536-33277555 | Msa0067950:intron | 20.0% |
| !! | TGATTGAATAATGAAAACTA+AGG | + | chr1_2:33277773-33277792 | Msa0067940:intron | 20.0% |
| !! | AAAAGCAATGAGTATAAATT+TGG | + | chr1_2:33277835-33277854 | Msa0067940:intron | 20.0% |
| !!! | ATGTACTTATGTAATTTGTA+TGG | + | chr1_2:33278468-33278487 | Msa0067940:intron | 20.0% |
| !! | AGAATATACGTAAATAAAGT+GGG | + | chr1_2:33278506-33278525 | Msa0067940:intron | 20.0% |
| !! | AAGAATATACGTAAATAAAG+TGG | + | chr1_2:33278507-33278526 | Msa0067940:intron | 20.0% |
| !!! | GAGAAAGAAGTTTATTTTAA+TGG | + | chr1_2:33280058-33280077 | Msa0067940:intron | 20.0% |
| !!! | GATTTTAGTCATTCTAATAA+TGG | - | chr1_2:33280555-33280574 | Msa0067950:CDS | 20.0% |
| !! | AACAAAGAAAACATAGTTTA+AGG | + | chr1_2:33281038-33281057 | Msa0067940:intron | 20.0% |
| !!! | GGGTTAGTTTATACTTTATA+GGG | + | chr1_2:33277151-33277170 | Msa0067940:intron | 25.0% |
| !!! | TGGGTTAGTTTATACTTTAT+AGG | + | chr1_2:33277152-33277171 | Msa0067940:intron | 25.0% |
| ! | TTACTAGACTTTATTCTTTC+TGG | - | chr1_2:33277223-33277242 | Msa0067950:CDS | 25.0% |
| ! | TACTAGACTTTATTCTTTCT+GGG | - | chr1_2:33277224-33277243 | Msa0067950:CDS | 25.0% |
| ! | AATGATAATAAATCCGTACA+GGG | + | chr1_2:33277534-33277553 | Msa0067940:intron | 25.0% |
| ! | TAATGATAATAAATCCGTAC+AGG | + | chr1_2:33277535-33277554 | Msa0067940:intron | 25.0% |
| ! | AAACAGTCTATTTAAAGAGT+TGG | + | chr1_2:33277599-33277618 | Msa0067940:intron | 25.0% |
| ! | CTCTTTAAATAGACTGTTTA+AGG | - | chr1_2:33277600-33277619 | Msa0067950:intron | 25.0% |
| !!! | CTTTTAGTTTTCCAATACAA+AGG | - | chr1_2:33278037-33278056 | Msa0067950:intron | 25.0% |
| !! | CAAAATTTGAGATGAACTAA+GGG | + | chr1_2:33278417-33278436 | Msa0067940:intron | 25.0% |
| !! | AATTTGTATGGACTAAAAAG+TGG | + | chr1_2:33278456-33278475 | Msa0067940:intron | 25.0% |
| !! | AACTATTTTCAGCATTTGAA+AGG | + | chr1_2:33278596-33278615 | Msa0067940:intron | 25.0% |
| ! | TATTACAGAAAAAGTAGTAC+AGG | + | chr1_2:33278791-33278810 | Msa0067940:intron | 25.0% |
| ! | TATTAACAAGAGAGACATTT+GGG | + | chr1_2:33278875-33278894 | Msa0067940:intron | 25.0% |
| ! | ACTAACAGAAAACATATTCA+TGG | - | chr1_2:33278913-33278932 | Msa0067950:intron | 25.0% |
| ! | TTGAAGATCAAAATAACTAG+CGG | - | chr1_2:33279005-33279024 | Msa0067950:intron | 25.0% |
| ! | ATAGTAATTGTGAATGAAAG+TGG | + | chr1_2:33279368-33279387 | Msa0067940:intron | 25.0% |
| !! | TTTGATTGATTGTAGTTTGT+TGG | + | chr1_2:33279531-33279550 | Msa0067940:intron | 25.0% |
| ! | ATGTTAATGTTACTGTCATT+AGG | - | chr1_2:33279678-33279697 | Msa0067950:intron | 25.0% |
| ! | TGTTAATGTTACTGTCATTA+GGG | - | chr1_2:33279679-33279698 | Msa0067950:intron | 25.0% |
| ! | AGTAACAAATACTTGTTCAA+CGG | - | chr1_2:33279742-33279761 | Msa0067950:CDS | 25.0% |
| ! | GAGATATGAAAATCCAAAAA+AGG | + | chr1_2:33280028-33280047 | Msa0067940:intron | 25.0% |
| ! | AATAGAAAAAATGACTGATG+TGG | - | chr1_2:33280463-33280482 | Msa0067950:CDS | 25.0% |
| ! | TTAAACACACTATCATCTAT+TGG | + | chr1_2:33280490-33280509 | Msa0067940:intron | 25.0% |
| !! | AATAGATGATAGTGTGTTTA+AGG | - | chr1_2:33280489-33280508 | Msa0067950:CDS | 25.0% |
| !! | ATAGATGATAGTGTGTTTAA+GGG | - | chr1_2:33280490-33280509 | Msa0067950:CDS | 25.0% |
| ! | AGTAAAAGATATGGAATATG+CGG | - | chr1_2:33280903-33280922 | Msa0067950:intron | 25.0% |
| !!! | ATTTTGGAGATTGAATTTCA+AGG | - | chr1_2:33280929-33280948 | Msa0067950:intron | 25.0% |
| !! | TTTTATAACATCATCAGACA+AGG | - | chr1_2:33281109-33281128 | Msa0067950:intron | 25.0% |
| ! | TTTGTTCATATATATGCAGT+TGG | - | chr1_2:33281195-33281214 | Msa0067950:intron | 25.0% |
| ! | TATATTTAGTGGAAATTCAG+TGG | - | chr1_2:33281252-33281271 | Msa0067950:intron | 25.0% |
| ATTCTATTGGACTTAAGATG+TGG | - | chr1_2:33277404-33277423 | Msa0067950:intron | 30.0% | |
| TAAAAACAAACAACCCTGTA+CGG | - | chr1_2:33277518-33277537 | Msa0067950:intron | 30.0% | |
| AGCATGATCAAAACAGTATT+GGG | + | chr1_2:33277654-33277673 | Msa0067940:intron | 30.0% | |
| AAGCATGATCAAAACAGTAT+TGG | + | chr1_2:33277655-33277674 | Msa0067940:intron | 30.0% | |
| AGTTTAAGGGATATTGGATT+TGG | + | chr1_2:33277917-33277936 | Msa0067940:intron | 30.0% | |
| TTTGGAAGTTTAAGGGATAT+TGG | + | chr1_2:33277923-33277942 | Msa0067940:intron | 30.0% | |
| ATATCCCTTAAACTTCCAAA+TGG | - | chr1_2:33277923-33277942 | Msa0067950:intron | 30.0% | |
| TATCCCTTAAACTTCCAAAT+GGG | - | chr1_2:33277924-33277943 | Msa0067950:intron | 30.0% | |
| AAACTAAAAGATCTCCACAT+CGG | + | chr1_2:33278027-33278046 | Msa0067940:intron | 30.0% | |
| !! | TTAGTTTTCCAATACAAAGG+AGG | - | chr1_2:33278040-33278059 | Msa0067950:intron | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | - | chr1_2:33278041-33278060 | Msa0067950:intron | 30.0% |
| !! | TTTGTATTTTCAGTGTCACT+AGG | + | chr1_2:33278208-33278227 | Msa0067940:intron | 30.0% |
| AAAAAGAGAACCAACTCAAA+TGG | - | chr1_2:33278241-33278260 | Msa0067950:intron | 30.0% | |
| ! | CCAAAATTTGAGATGAACTA+AGG | + | chr1_2:33278418-33278437 | Msa0067940:intron | 30.0% |
| ! | CCTTAGTTCATCTCAAATTT+TGG | - | chr1_2:33278415-33278434 | Msa0067950:intron | 30.0% |
| GATAATTTGACAGTGAAACT+AGG | + | chr1_2:33278729-33278748 | Msa0067940:intron | 30.0% | |
| TTATCACCTTCAACATGATA+TGG | + | chr1_2:33278753-33278772 | Msa0067940:intron | 30.0% | |
| TGTTGAAGGTGATAATAGAT+TGG | - | chr1_2:33278758-33278777 | Msa0067950:intron | 30.0% | |
| TCAATACATTCAGTTCCTAT+AGG | + | chr1_2:33278837-33278856 | Msa0067940:intron | 30.0% | |
| ATTAACAAGAGAGACATTTG+GGG | + | chr1_2:33278874-33278893 | Msa0067940:intron | 30.0% | |
| CTATTAACAAGAGAGACATT+TGG | + | chr1_2:33278876-33278895 | Msa0067940:intron | 30.0% | |
| TATTCTTTCGAAAACCAACT+AGG | + | chr1_2:33279158-33279177 | Msa0067940:intron | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | - | chr1_2:33279176-33279195 | Msa0067950:CDS | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | - | chr1_2:33279177-33279196 | Msa0067950:CDS | 30.0% | |
| CACTAAACTTTCAAAAAAGC+AGG | - | chr1_2:33279246-33279265 | Msa0067950:CDS | 30.0% | |
| ACGCAATAAAATAGAGCTTA+GGG | + | chr1_2:33279645-33279664 | Msa0067940:intron | 30.0% | |
| AACGCAATAAAATAGAGCTT+AGG | + | chr1_2:33279646-33279665 | Msa0067940:intron | 30.0% | |
| ! | TAAGCTCTATTTTATTGCGT+TGG | - | chr1_2:33279645-33279664 | Msa0067950:intron | 30.0% |
| ! | AGTATTTGTTACTGTTACGT+CGG | + | chr1_2:33279735-33279754 | Msa0067940:intron | 30.0% |
| AAACAACACTAATAAGTGGA+CGG | + | chr1_2:33279871-33279890 | Msa0067940:intron | 30.0% | |
| ACACAAACAACACTAATAAG+TGG | + | chr1_2:33279875-33279894 | Msa0067940:intron | 30.0% | |
| !!! | ATTGTCATGTTTGCCTTTTT+TGG | - | chr1_2:33280012-33280031 | Msa0067950:intron | 30.0% |
| ! | GCATATTCCATATCTTTTAC+TGG | + | chr1_2:33280904-33280923 | Msa0067940:intron | 30.0% |
| GTAAAAGATATGGAATATGC+GGG | - | chr1_2:33280904-33280923 | Msa0067950:intron | 30.0% | |
| !! | CACAAAAACACATGGTTTTA+GGG | - | chr1_2:33280957-33280976 | Msa0067950:intron | 30.0% |
| !!! | ACAAAAACACATGGTTTTAG+GGG | - | chr1_2:33280958-33280977 | Msa0067950:intron | 30.0% |
| GAATTTACATGAGATGTTCA+AGG | - | chr1_2:33281085-33281104 | Msa0067950:intron | 30.0% | |
| ! | TACATGGTAACAGCATTTTA+CGG | + | chr1_2:33281143-33281162 | Msa0067940:intron | 30.0% |
| ! | AAGAAGCATGGTATATTTAG+TGG | - | chr1_2:33281241-33281260 | Msa0067950:intron | 30.0% |
| TATAATGAACATCTCGACTA+TGG | - | chr1_2:33281316-33281335 | Msa0067950:intron | 30.0% | |
| ! | CATGATCAAAACAGTATTGG+GGG | + | chr1_2:33277652-33277671 | Msa0067940:intron | 35.0% |
| GCATGATCAAAACAGTATTG+GGG | + | chr1_2:33277653-33277672 | Msa0067940:intron | 35.0% | |
| GCTTTCTGTTGCAAAATGTT+TGG | - | chr1_2:33277671-33277690 | Msa0067950:intron | 35.0% | |
| CTGTTGCAAAATGTTTGGTA+TGG | - | chr1_2:33277676-33277695 | Msa0067950:intron | 35.0% | |
| GTGTAATATTCCCACATATC+TGG | - | chr1_2:33277730-33277749 | Msa0067950:intron | 35.0% | |
| TGACCCATTTGGAAGTTTAA+GGG | + | chr1_2:33277930-33277949 | Msa0067940:intron | 35.0% | |
| GTCAGCATGCAAAATGAATT+GGG | - | chr1_2:33277946-33277965 | Msa0067950:intron | 35.0% | |
| ! | ATGGTATTTGGCTTCAGAAT+TGG | - | chr1_2:33277981-33278000 | Msa0067950:intron | 35.0% |
| !! | TTGGTTCTCTTTTTCTTGAG+GGG | + | chr1_2:33278235-33278254 | Msa0067940:intron | 35.0% |
| !! | GTTGGTTCTCTTTTTCTTGA+GGG | + | chr1_2:33278236-33278255 | Msa0067940:intron | 35.0% |
| !! | AGTTGGTTCTCTTTTTCTTG+AGG | + | chr1_2:33278237-33278256 | Msa0067940:intron | 35.0% |
| ! | TAAAGTTTTGCAGACGCTAA+TGG | - | chr1_2:33278618-33278637 | Msa0067950:intron | 35.0% |
| TTATCGCCATATCATGTTGA+AGG | - | chr1_2:33278744-33278763 | Msa0067950:intron | 35.0% | |
| ! | TCGTACCTTCATTTTCCTAT+AGG | - | chr1_2:33278819-33278838 | Msa0067950:intron | 35.0% |
| CAGTTCCTATAGGAAAATGA+AGG | + | chr1_2:33278827-33278846 | Msa0067940:intron | 35.0% | |
| TTCGAAAACCAACTAGGTAT+CGG | + | chr1_2:33279152-33279171 | Msa0067940:intron | 35.0% | |
| ! | AAGGCAACAATTAGAAGTGT+TGG | - | chr1_2:33279200-33279219 | Msa0067950:CDS | 35.0% |
| !! | AACAATTAGAAGTGTTGGTG+AGG | - | chr1_2:33279205-33279224 | Msa0067950:CDS | 35.0% |
| !! | TGGTTGGAAGTCATTTTCAA+AGG | - | chr1_2:33279289-33279308 | Msa0067950:CDS | 35.0% |
| ! | AAGGAACATGAGTTGAAAGT+TGG | - | chr1_2:33279308-33279327 | Msa0067950:CDS | 35.0% |
| TACTATTATCCCAACCACAA+AGG | - | chr1_2:33279382-33279401 | Msa0067950:intron | 35.0% | |
| GCAATAAAATAGAGCTTAGG+GGG | + | chr1_2:33279643-33279662 | Msa0067940:intron | 35.0% | |
| CGCAATAAAATAGAGCTTAG+GGG | + | chr1_2:33279644-33279663 | Msa0067940:intron | 35.0% | |
| ACAAATACTTGTTCAACGGT+CGG | - | chr1_2:33279746-33279765 | Msa0067950:CDS | 35.0% | |
| TGAGACAAATCAGTTTCACA+TGG | - | chr1_2:33279793-33279812 | Msa0067950:CDS | 35.0% | |
| CAAATCAGTTTCACATGGTT+TGG | - | chr1_2:33279798-33279817 | Msa0067950:CDS | 35.0% | |
| TTCTGTCAAAATGGAATGAG+CGG | - | chr1_2:33279836-33279855 | Msa0067950:CDS | 35.0% | |
| AACAACACTAATAAGTGGAC+GGG | + | chr1_2:33279870-33279889 | Msa0067940:intron | 35.0% | |
| ACATACATTGAACAGTGTGT+AGG | + | chr1_2:33279959-33279978 | Msa0067940:intron | 35.0% | |
| AGAGAGAAGAAACAAGAACA+GGG | - | chr1_2:33280136-33280155 | Msa0067950:intron | 35.0% | |
| ! | TTTTCTGATGAGCAGTTGTT+GGG | - | chr1_2:33280324-33280343 | Msa0067950:CDS | 35.0% |
| !! | ACGAGGTTTTATGACAGTAA+GGG | + | chr1_2:33280381-33280400 | Msa0067940:intron | 35.0% |
| ! | GTGTTGTCTCTGATTTTTCT+TGG | + | chr1_2:33280882-33280901 | Msa0067940:intron | 35.0% |
| GACAACACCAGTAAAAGATA+TGG | - | chr1_2:33280894-33280913 | Msa0067950:intron | 35.0% | |
| ! | GCACAAAAACACATGGTTTT+AGG | - | chr1_2:33280956-33280975 | Msa0067950:intron | 35.0% |
| AGAGATTGCAAAGTAAAGAC+TGG | - | chr1_2:33281370-33281389 | Msa0067950:CDS | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | - | chr1_2:33281420-33281439 | Msa0067950:CDS | 35.0% | |
| GTATACTTGCTTCACTTTCG+TGG | - | chr1_2:33277435-33277454 | Msa0067950:intron | 40.0% | |
| !! | GGCAATACCATTTTTGCCTT+CGG | - | chr1_2:33277697-33277716 | Msa0067950:intron | 40.0% |
| CCTAAGCAAACCAGATATGT+GGG | + | chr1_2:33277743-33277762 | Msa0067940:intron | 40.0% | |
| ACCTAAGCAAACCAGATATG+TGG | + | chr1_2:33277744-33277763 | Msa0067940:intron | 40.0% | |
| TTCCAAGGAATTTCGTAGAG+AGG | - | chr1_2:33277876-33277895 | Msa0067950:intron | 40.0% | |
| TACCTCTCTACGAAATTCCT+TGG | + | chr1_2:33277881-33277900 | Msa0067940:intron | 40.0% | |
| ! | GGAATTTCGTAGAGAGGTAT+TGG | - | chr1_2:33277882-33277901 | Msa0067950:intron | 40.0% |
| CTGACCCATTTGGAAGTTTA+AGG | + | chr1_2:33277931-33277950 | Msa0067940:intron | 40.0% | |
| ! | ATTTTGCATGCTGACCCATT+TGG | + | chr1_2:33277941-33277960 | Msa0067940:intron | 40.0% |
| GGTCAGCATGCAAAATGAAT+TGG | - | chr1_2:33277945-33277964 | Msa0067950:intron | 40.0% | |
| AAAATGAATTGGGTGCAACG+CGG | - | chr1_2:33277956-33277975 | Msa0067950:intron | 40.0% | |
| ! | TTTGGCTTCAGAATTGGAAG+AGG | - | chr1_2:33277987-33278006 | Msa0067950:intron | 40.0% |
| AGAATTGGAAGAGGTTTGCA+TGG | - | chr1_2:33277996-33278015 | Msa0067950:intron | 40.0% | |
| AATCTGACCCTCCTTTGTAT+TGG | + | chr1_2:33278051-33278070 | Msa0067940:intron | 40.0% | |
| ! | AGTAGCAATGCCATTTGAGT+TGG | + | chr1_2:33278254-33278273 | Msa0067940:intron | 40.0% |
| TTGTGAATGTTAGTCCCTTG+AGG | + | chr1_2:33278289-33278308 | Msa0067940:intron | 40.0% | |
| TGCAACCCAGCAAAAAGTTT+CGG | - | chr1_2:33278327-33278346 | Msa0067950:intron | 40.0% | |
| ! | CTTACCCGAAACTTTTTGCT+GGG | + | chr1_2:33278335-33278354 | Msa0067940:intron | 40.0% |
| ! | ACTTACCCGAAACTTTTTGC+TGG | + | chr1_2:33278336-33278355 | Msa0067940:intron | 40.0% |
| GTGAAACTAGGACTCTCATT+GGG | + | chr1_2:33278717-33278736 | Msa0067940:intron | 40.0% | |
| AGTGAAACTAGGACTCTCAT+TGG | + | chr1_2:33278718-33278737 | Msa0067940:intron | 40.0% | |
| AACTAGCGGAAGAGACATTT+AGG | - | chr1_2:33279019-33279038 | Msa0067950:intron | 40.0% | |
| ATGTGCAAGGCTCATTCAAA+CGG | + | chr1_2:33279077-33279096 | Msa0067940:intron | 40.0% | |
| ATTCATGCACGAAATGTGCA+AGG | + | chr1_2:33279090-33279109 | Msa0067940:intron | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | - | chr1_2:33279181-33279200 | Msa0067950:CDS | 40.0% | |
| !! | CAGGAGCAGTTTTGTAATGA+GGG | - | chr1_2:33279265-33279284 | Msa0067950:CDS | 40.0% |
| CAATACCTTGAAACTTCTCC+GGG | + | chr1_2:33279415-33279434 | Msa0067940:intron | 40.0% | |
| GCAATACCTTGAAACTTCTC+CGG | + | chr1_2:33279416-33279435 | Msa0067940:intron | 40.0% | |
| ! | GTTACTGTTACGTCGGATTT+TGG | + | chr1_2:33279728-33279747 | Msa0067940:intron | 40.0% |
| ! | CAGTTTCACATGGTTTGGAA+CGG | - | chr1_2:33279803-33279822 | Msa0067950:CDS | 40.0% |
| ATGTATGTGTGCCATCAAAC+AGG | - | chr1_2:33279971-33279990 | Msa0067950:intron | 40.0% | |
| TCAAGACACATCCTGTTTGA+TGG | + | chr1_2:33279985-33280004 | Msa0067940:intron | 40.0% | |
| ! | TTGTTTCTTCTCTCTGGTAG+TGG | + | chr1_2:33280131-33280150 | Msa0067940:intron | 40.0% |
| ! | CTGTTCTTGTTTCTTCTCTC+TGG | + | chr1_2:33280137-33280156 | Msa0067940:intron | 40.0% |
| CAGAGAGAAGAAACAAGAAC+AGG | - | chr1_2:33280135-33280154 | Msa0067950:intron | 40.0% | |
| GAGATGAGAGATATACAGAG+AGG | - | chr1_2:33280177-33280196 | Msa0067950:CDS | 40.0% | |
| ! | GTTTTCTGATGAGCAGTTGT+TGG | - | chr1_2:33280323-33280342 | Msa0067950:CDS | 40.0% |
| !! | CGAGGTTTTATGACAGTAAG+GGG | + | chr1_2:33280380-33280399 | Msa0067940:intron | 40.0% |
| !! | CACGAGGTTTTATGACAGTA+AGG | + | chr1_2:33280382-33280401 | Msa0067940:intron | 40.0% |
| GTCATAAAACCTCGTGATGA+AGG | - | chr1_2:33280386-33280405 | Msa0067950:CDS | 40.0% | |
| AACCTCGTGATGAAGGATAA+TGG | - | chr1_2:33280393-33280412 | Msa0067950:CDS | 40.0% | |
| ! | TCGTGATGAAGGATAATGGT+GGG | - | chr1_2:33280397-33280416 | Msa0067950:CDS | 40.0% |
| GTTGTGGGTAGTGTAAATTG+TGG | - | chr1_2:33280419-33280438 | Msa0067950:CDS | 40.0% | |
| AGGGATCTACTGAAGAAGTT+GGG | + | chr1_2:33280823-33280842 | Msa0067940:intron | 40.0% | |
| ACATGTCCACAAACTTCTCA+GGG | + | chr1_2:33280842-33280861 | Msa0067940:intron | 40.0% | |
| ! | CTGATTTTTCTTGGACTCCT+TGG | + | chr1_2:33280873-33280892 | Msa0067940:intron | 40.0% |
| ! | ATGGAATATGCGGGCAATTT+TGG | - | chr1_2:33280913-33280932 | Msa0067950:intron | 40.0% |
| CACACACGTAGCTATATACA+TGG | + | chr1_2:33281159-33281178 | Msa0067940:intron | 40.0% | |
| AATTCAGTGGAGTTGAGAGT+AGG | - | chr1_2:33281265-33281284 | Msa0067950:intron | 40.0% | |
| ATTCAGTGGAGTTGAGAGTA+GGG | - | chr1_2:33281266-33281285 | Msa0067950:intron | 40.0% | |
| ATGAACATCTCGACTATGGT+TGG | - | chr1_2:33281320-33281339 | Msa0067950:intron | 40.0% | |
| ! | GACTATGGTTGGTTCACTAA+AGG | - | chr1_2:33281331-33281350 | Msa0067950:intron | 40.0% |
| ! | ATGGTTGGTTCACTAAAGGT+TGG | - | chr1_2:33281335-33281354 | Msa0067950:intron | 40.0% |
| TTGAGCACAAGTGGTTAACG+AGG | + | chr1_2:33277563-33277582 | Msa0067940:intron | 45.0% | |
| ACCACTTGTGCTCAATCACT+TGG | - | chr1_2:33277568-33277587 | Msa0067950:intron | 45.0% | |
| ACCAAGTGATTGAGCACAAG+TGG | + | chr1_2:33277572-33277591 | Msa0067940:intron | 45.0% | |
| TTACACATAGAGAGAGCCGA+AGG | + | chr1_2:33277716-33277735 | Msa0067940:intron | 45.0% | |
| !! | CCCACATATCTGGTTTGCTT+AGG | - | chr1_2:33277740-33277759 | Msa0067950:intron | 45.0% |
| TGTGCTTGCAGATGATTCCA+AGG | - | chr1_2:33277861-33277880 | Msa0067950:intron | 45.0% | |
| GCAACCCAGCAAAAAGTTTC+GGG | - | chr1_2:33278328-33278347 | Msa0067950:intron | 45.0% | |
| TAATGGAAACACAGGAGGCA+TGG | - | chr1_2:33278635-33278654 | Msa0067950:intron | 45.0% | |
| ! | AATGGAAACACAGGAGGCAT+GGG | - | chr1_2:33278636-33278655 | Msa0067950:intron | 45.0% |
| !! | AACTAGGTATCGGCTGTTTC+AGG | + | chr1_2:33279142-33279161 | Msa0067940:intron | 45.0% |
| TGAAACAGCCGATACCTAGT+TGG | - | chr1_2:33279141-33279160 | Msa0067950:CDS | 45.0% | |
| !! | GCAGGAGCAGTTTTGTAATG+AGG | - | chr1_2:33279264-33279283 | Msa0067950:CDS | 45.0% |
| !! | AGCAGTTTTGTAATGAGGGC+TGG | - | chr1_2:33279269-33279288 | Msa0067950:CDS | 45.0% |
| !! | GTTTTGTAATGAGGGCTGGT+TGG | - | chr1_2:33279273-33279292 | Msa0067950:CDS | 45.0% |
| !! | CTGTTACGTCGGATTTTGGT+CGG | + | chr1_2:33279724-33279743 | Msa0067940:intron | 45.0% |
| CGAAAGCGGTTCTGTCAAAA+TGG | - | chr1_2:33279827-33279846 | Msa0067950:CDS | 45.0% | |
| ! | CACTAATAAGTGGACGGGTT+CGG | + | chr1_2:33279865-33279884 | Msa0067940:intron | 45.0% |
| !! | TTCTTCTCTCTGGTAGTGGT+GGG | + | chr1_2:33280127-33280146 | Msa0067940:intron | 45.0% |
| !! | TTTCTTCTCTCTGGTAGTGG+TGG | + | chr1_2:33280128-33280147 | Msa0067940:intron | 45.0% |
| ! | TGACGGGTCTAACGGAATAA+CGG | + | chr1_2:33280263-33280282 | Msa0067940:intron | 45.0% |
| GACCGTTTCAACGTCAGTTT+CGG | + | chr1_2:33280290-33280309 | Msa0067940:intron | 45.0% | |
| GAAACTGACGTTGAAACGGT+CGG | - | chr1_2:33280289-33280308 | Msa0067950:CDS | 45.0% | |
| AAACTGACGTTGAAACGGTC+GGG | - | chr1_2:33280290-33280309 | Msa0067950:CDS | 45.0% | |
| CACCATTATCCTTCATCACG+AGG | + | chr1_2:33280398-33280417 | Msa0067940:intron | 45.0% | |
| ! | CTCGTGATGAAGGATAATGG+TGG | - | chr1_2:33280396-33280415 | Msa0067950:CDS | 45.0% |
| !! | TGAAGGATAATGGTGGGTTG+TGG | - | chr1_2:33280403-33280422 | Msa0067950:CDS | 45.0% |
| !! | GAAGGATAATGGTGGGTTGT+GGG | - | chr1_2:33280404-33280423 | Msa0067950:CDS | 45.0% |
| GCTAAAAGTGATATGCTGCG+AGG | - | chr1_2:33280720-33280739 | Msa0067950:intron | 45.0% | |
| GGGATCTACTGAAGAAGTTG+GGG | + | chr1_2:33280822-33280841 | Msa0067940:intron | 45.0% | |
| CAGGGATCTACTGAAGAAGT+TGG | + | chr1_2:33280824-33280843 | Msa0067940:intron | 45.0% | |
| GTAGATCCCTGAGAAGTTTG+TGG | - | chr1_2:33280833-33280852 | Msa0067950:intron | 45.0% | |
| CACATGTCCACAAACTTCTC+AGG | + | chr1_2:33280843-33280862 | Msa0067940:intron | 45.0% | |
| TGGACATGTGCAGAAAACCA+AGG | - | chr1_2:33280853-33280872 | Msa0067950:intron | 45.0% | |
| AGGAGCTGCACAAAAACACA+TGG | - | chr1_2:33280949-33280968 | Msa0067950:intron | 45.0% | |
| TGCTTCTTCAACAGCTCACT+TGG | + | chr1_2:33281229-33281248 | Msa0067940:intron | 45.0% | |
| AGTGAGCTGTTGAAGAAGCA+TGG | - | chr1_2:33281229-33281248 | Msa0067950:intron | 45.0% | |
| TTCAGTGGAGTTGAGAGTAG+GGG | - | chr1_2:33281267-33281286 | Msa0067950:intron | 45.0% | |
| ! | GAGCGTGGTAGTGAAGCTAA+AGG | - | chr1_2:33277057-33277076 | Msa0067950:CDS | 50.0% |
| GAGAGAGCCGAAGGCAAAAA+TGG | + | chr1_2:33277707-33277726 | Msa0067940:intron | 50.0% | |
| ! | TGCAACGCGGTGATGGTATT+TGG | - | chr1_2:33277969-33277988 | Msa0067950:intron | 50.0% |
| ACTACTGCTGCTACACCTCA+AGG | - | chr1_2:33278271-33278290 | Msa0067950:intron | 50.0% | |
| CTACTGCTGCTACACCTCAA+GGG | - | chr1_2:33278272-33278291 | Msa0067950:intron | 50.0% | |
| GCAGACGCTAATGGAAACAC+AGG | - | chr1_2:33278627-33278646 | Msa0067950:intron | 50.0% | |
| GACGCTAATGGAAACACAGG+AGG | - | chr1_2:33278630-33278649 | Msa0067950:intron | 50.0% | |
| !! | GTATCGGCTGTTTCAGGTCA+AGG | + | chr1_2:33279136-33279155 | Msa0067940:intron | 50.0% |
| ATCCCAACCACAAAGGAACC+AGG | - | chr1_2:33279389-33279408 | Msa0067950:intron | 50.0% | |
| GTTCAACGGTCGGATGTGTA+CGG | - | chr1_2:33279756-33279775 | Msa0067950:CDS | 50.0% | |
| TTCAACGGTCGGATGTGTAC+GGG | - | chr1_2:33279757-33279776 | Msa0067950:CDS | 50.0% | |
| ! | TGGTTTGGAACGGACGAAAG+CGG | - | chr1_2:33279813-33279832 | Msa0067950:CDS | 50.0% |
| !! | GGTCTAACGGAATAACGGGT+GGG | + | chr1_2:33280258-33280277 | Msa0067940:intron | 50.0% |
| GACGGGTCTAACGGAATAAC+GGG | + | chr1_2:33280262-33280281 | Msa0067940:intron | 50.0% | |
| GTTTCAACGTCAGTTTCGGC+GGG | + | chr1_2:33280286-33280305 | Msa0067940:intron | 50.0% | |
| CGTTTCAACGTCAGTTTCGG+CGG | + | chr1_2:33280287-33280306 | Msa0067940:intron | 50.0% | |
| CGCCGAAACTGACGTTGAAA+CGG | - | chr1_2:33280285-33280304 | Msa0067950:CDS | 50.0% | |
| GTGTGTAGAGTGTGTGTTCG+TGG | - | chr1_2:33280514-33280533 | Msa0067950:CDS | 50.0% | |
| TGAGAGTAGGGGAAGGAACA+TGG | - | chr1_2:33281278-33281297 | Msa0067950:intron | 50.0% | |
| GAACAACACGGCAATGAGCG+TGG | - | chr1_2:33277042-33277061 | Msa0067950:CDS | 55.0% | |
| AATTGGGTGCAACGCGGTGA+TGG | - | chr1_2:33277962-33277981 | Msa0067950:intron | 55.0% | |
| TTTGCATGGTCGCTCCGATG+TGG | - | chr1_2:33278010-33278029 | Msa0067950:intron | 55.0% | |
| ! | GTGTTGGTGAGGACAGTGCA+TGG | - | chr1_2:33279216-33279235 | Msa0067950:CDS | 55.0% |
| GGCCTGGTTCCTTTGTGGTT+GGG | + | chr1_2:33279394-33279413 | Msa0067940:intron | 55.0% | |
| AACCACAAAGGAACCAGGCC+CGG | - | chr1_2:33279394-33279413 | Msa0067950:intron | 55.0% | |
| !! | GCTTAGGGGGACTAGCTGAA+GGG | + | chr1_2:33279630-33279649 | Msa0067940:intron | 55.0% |
| !! | AGCTTAGGGGGACTAGCTGA+AGG | + | chr1_2:33279631-33279650 | Msa0067940:intron | 55.0% |
| TACAACCGAGCCAAACCACC+TGG | - | chr1_2:33280232-33280251 | Msa0067950:CDS | 55.0% | |
| ! | GGGTCTAACGGAATAACGGG+TGG | + | chr1_2:33280259-33280278 | Msa0067940:intron | 55.0% |
| GACGTTGAAACGGTCGGGAA+TGG | - | chr1_2:33280295-33280314 | Msa0067950:CDS | 55.0% | |
| TGACAGTAAGGGGTGAGCAC+CGG | + | chr1_2:33280370-33280389 | Msa0067940:intron | 55.0% | |
| GTGGAGTTGAGAGTAGGGGA+AGG | - | chr1_2:33281271-33281290 | Msa0067950:intron | 55.0% | |
| GGGCCTGGTTCCTTTGTGGT+TGG | + | chr1_2:33279395-33279414 | Msa0067940:intron | 60.0% | |
| CCTTGAAACTTCTCCGGGCC+TGG | + | chr1_2:33279410-33279429 | Msa0067940:intron | 60.0% | |
| CCAGGCCCGGAGAAGTTTCA+AGG | - | chr1_2:33279407-33279426 | Msa0067950:intron | 60.0% | |
| TCTCACACTTCACGCGCGTG+TGG | + | chr1_2:33279909-33279928 | Msa0067940:intron | 60.0% | |
| !! | AACGGAATAACGGGTGGGCC+AGG | + | chr1_2:33280253-33280272 | Msa0067940:intron | 60.0% |
| ACGTCAGTTTCGGCGGGTGA+CGG | + | chr1_2:33280280-33280299 | Msa0067940:intron | 60.0% | |
| !! | AGTAAGGGGTGAGCACCGGT+CGG | + | chr1_2:33280366-33280385 | Msa0067940:intron | 60.0% |
| CTCCGGGCCTGGTTCCTTTG+TGG | + | chr1_2:33279399-33279418 | Msa0067940:intron | 65.0% | |
| ! | GTGGGCCAGGTGGTTTGGCT+CGG | + | chr1_2:33280240-33280259 | Msa0067940:intron | 65.0% |
| AACGGGTGGGCCAGGTGGTT+TGG | + | chr1_2:33280245-33280264 | Msa0067940:intron | 65.0% | |
| !! | GGAATAACGGGTGGGCCAGG+TGG | + | chr1_2:33280250-33280269 | Msa0067940:intron | 65.0% |
| !! | TCGGCGGGTGACGGGTCTAA+CGG | + | chr1_2:33280271-33280290 | Msa0067940:intron | 65.0% |
| CGTCAGTTTCGGCGGGTGAC+GGG | + | chr1_2:33280279-33280298 | Msa0067940:intron | 65.0% | |
| ! | CGGTCGGTTACGGGCGGATT+CGG | + | chr1_2:33280350-33280369 | Msa0067940:intron | 65.0% |
| CGAATCCGCCCGTAACCGAC+CGG | - | chr1_2:33280348-33280367 | Msa0067950:CDS | 65.0% | |
| !! | GGTGAGCACCGGTCGGTTAC+GGG | + | chr1_2:33280359-33280378 | Msa0067940:intron | 65.0% |
| !! | GGGTGAGCACCGGTCGGTTA+CGG | + | chr1_2:33280360-33280379 | Msa0067940:intron | 65.0% |
| !! | GAGCACCGGTCGGTTACGGG+CGG | + | chr1_2:33280356-33280375 | Msa0067940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33277033 | 33281456 | 33277033 | ID=Msa0067950;Name=Msa0067950 |
| chr1_2 | mRNA | 33277033 | 33281456 | 33277033 | ID=Msa0067950-mRNA-1;Parent=Msa0067950;Name=Msa0067950-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|1|1|6|0|435 |
| chr1_2 | exon | 33281358 | 33281456 | 33281358 | ID=Msa0067950-mRNA-1:exon:10988;Parent=Msa0067950-mRNA-1 |
| chr1_2 | exon | 33280140 | 33280617 | 33280140 | ID=Msa0067950-mRNA-1:exon:10987;Parent=Msa0067950-mRNA-1 |
| chr1_2 | exon | 33279710 | 33279858 | 33279710 | ID=Msa0067950-mRNA-1:exon:10986;Parent=Msa0067950-mRNA-1 |
| chr1_2 | exon | 33279061 | 33279340 | 33279061 | ID=Msa0067950-mRNA-1:exon:10985;Parent=Msa0067950-mRNA-1 |
| chr1_2 | exon | 33277359 | 33277417 | 33277359 | ID=Msa0067950-mRNA-1:exon:10984;Parent=Msa0067950-mRNA-1 |
| chr1_2 | exon | 33277033 | 33277275 | 33277033 | ID=Msa0067950-mRNA-1:exon:10983;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33281358 | 33281456 | 33281358 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33280140 | 33280617 | 33280140 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33279710 | 33279858 | 33279710 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33279061 | 33279340 | 33279061 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33277359 | 33277417 | 33277359 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| chr1_2 | CDS | 33277033 | 33277275 | 33277033 | ID=Msa0067950-mRNA-1:cds;Parent=Msa0067950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
