Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071450 | sp|Q8LFU0|NFYAA_ARATH | 43.986 | 291 | 101 | 12 | 29 | 301 | 13 | 259 | 2.25e-58 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071450 | A4ZVU9 | 89.189 | 333 | 11 | 1 | 1 | 308 | 1 | 333 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0071450 | TF | NF-YA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071450 | MtrunA17_Chr1g0177091 | 89.458 | 332 | 11 | 1 | 1 | 308 | 1 | 332 | 0.0 | 610 |
| Msa0071450 | MtrunA17_Chr7g0267581 | 66.261 | 329 | 78 | 7 | 1 | 300 | 1 | 325 | 1.62e-145 | 412 |
| Msa0071450 | MtrunA17_Chr8g0352251 | 50.400 | 125 | 49 | 4 | 104 | 217 | 109 | 231 | 2.91e-30 | 115 |
| Msa0071450 | MtrunA17_Chr2g0300261 | 49.624 | 133 | 49 | 4 | 92 | 207 | 14 | 145 | 7.96e-30 | 113 |
| Msa0071450 | MtrunA17_Chr2g0292411 | 50.467 | 107 | 51 | 1 | 109 | 213 | 80 | 186 | 7.33e-29 | 110 |
| Msa0071450 | MtrunA17_Chr3g0103391 | 50.000 | 116 | 44 | 4 | 103 | 207 | 125 | 237 | 2.82e-27 | 108 |
| Msa0071450 | MtrunA17_Chr8g0343451 | 47.414 | 116 | 46 | 4 | 96 | 198 | 110 | 223 | 3.51e-26 | 105 |
| Msa0071450 | MtrunA17_Chr2g0329811 | 36.723 | 177 | 100 | 4 | 71 | 236 | 108 | 283 | 4.00e-25 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071450 | AT5G06510.1 | 43.986 | 291 | 101 | 12 | 29 | 301 | 13 | 259 | 2.29e-59 | 191 |
| Msa0071450 | AT5G06510.5 | 43.986 | 291 | 101 | 12 | 29 | 301 | 13 | 259 | 2.29e-59 | 191 |
| Msa0071450 | AT5G06510.2 | 43.986 | 291 | 101 | 12 | 29 | 301 | 13 | 259 | 2.29e-59 | 191 |
| Msa0071450 | AT5G06510.6 | 43.986 | 291 | 101 | 12 | 29 | 301 | 13 | 259 | 2.29e-59 | 191 |
| Msa0071450 | AT3G05690.1 | 45.338 | 311 | 107 | 17 | 20 | 302 | 9 | 284 | 6.79e-58 | 188 |
| Msa0071450 | AT3G05690.2 | 45.338 | 311 | 107 | 17 | 20 | 302 | 46 | 321 | 5.41e-57 | 187 |
| Msa0071450 | AT5G06510.3 | 48.511 | 235 | 76 | 9 | 69 | 301 | 19 | 210 | 5.83e-56 | 181 |
| Msa0071450 | AT5G06510.4 | 51.269 | 197 | 58 | 8 | 107 | 301 | 4 | 164 | 3.10e-49 | 162 |
| Msa0071450 | AT5G06510.7 | 51.269 | 197 | 58 | 8 | 107 | 301 | 4 | 164 | 3.10e-49 | 162 |
| Msa0071450 | AT2G34720.1 | 39.444 | 180 | 92 | 5 | 66 | 232 | 12 | 187 | 5.92e-33 | 120 |
| Msa0071450 | AT1G30500.1 | 50.420 | 119 | 53 | 1 | 103 | 215 | 53 | 171 | 1.66e-32 | 119 |
| Msa0071450 | AT1G30500.2 | 49.593 | 123 | 52 | 1 | 103 | 215 | 53 | 175 | 9.13e-32 | 117 |
| Msa0071450 | AT2G34720.2 | 46.377 | 138 | 58 | 4 | 108 | 232 | 18 | 152 | 1.61e-30 | 113 |
| Msa0071450 | AT2G34720.3 | 46.377 | 138 | 58 | 4 | 108 | 232 | 18 | 152 | 1.61e-30 | 113 |
| Msa0071450 | AT1G72830.1 | 42.045 | 176 | 78 | 7 | 108 | 269 | 135 | 300 | 3.25e-30 | 117 |
| Msa0071450 | AT5G12840.4 | 45.033 | 151 | 65 | 5 | 103 | 242 | 125 | 268 | 1.42e-28 | 111 |
| Msa0071450 | AT5G12840.2 | 45.033 | 151 | 65 | 5 | 103 | 242 | 125 | 268 | 1.42e-28 | 111 |
| Msa0071450 | AT1G72830.2 | 41.808 | 177 | 78 | 8 | 108 | 269 | 135 | 301 | 1.44e-28 | 112 |
| Msa0071450 | AT5G12840.5 | 45.033 | 151 | 65 | 5 | 103 | 242 | 126 | 269 | 1.57e-28 | 111 |
| Msa0071450 | AT5G12840.3 | 45.033 | 151 | 65 | 5 | 103 | 242 | 126 | 269 | 1.57e-28 | 111 |
| Msa0071450 | AT5G12840.1 | 45.033 | 151 | 65 | 5 | 103 | 242 | 126 | 269 | 1.57e-28 | 111 |
| Msa0071450 | AT1G17590.3 | 59.259 | 81 | 31 | 2 | 119 | 199 | 153 | 231 | 2.88e-26 | 106 |
| Msa0071450 | AT1G17590.2 | 59.259 | 81 | 31 | 2 | 119 | 199 | 153 | 231 | 2.88e-26 | 106 |
| Msa0071450 | AT1G17590.4 | 59.259 | 81 | 31 | 2 | 119 | 199 | 153 | 231 | 2.88e-26 | 106 |
| Msa0071450 | AT1G17590.1 | 59.259 | 81 | 31 | 2 | 119 | 199 | 153 | 231 | 2.88e-26 | 106 |
| Msa0071450 | AT1G54160.1 | 64.000 | 75 | 26 | 1 | 125 | 199 | 164 | 237 | 2.62e-25 | 103 |
| Msa0071450 | AT3G20910.1 | 48.760 | 121 | 41 | 5 | 109 | 215 | 126 | 239 | 1.00e-24 | 101 |
| Msa0071450 | AT3G14020.2 | 51.961 | 102 | 40 | 3 | 108 | 205 | 140 | 236 | 5.51e-24 | 99.8 |
| Msa0071450 | AT3G14020.1 | 51.961 | 102 | 40 | 3 | 108 | 205 | 140 | 236 | 5.51e-24 | 99.8 |
| Msa0071450 | AT1G72830.3 | 38.182 | 165 | 75 | 6 | 108 | 269 | 135 | 275 | 1.09e-21 | 93.6 |
Find 72 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGATCTCAACCTGTTTA+TGG | 0.217575 | 1_2:+43355676 | Msa0071450:CDS |
| TACGGGCTCTTCTCGACTTA+TGG | 0.224539 | 1_2:+43356289 | Msa0071450:CDS |
| AACACAAAAGTTTCTGCTAA+TGG | 0.270945 | 1_2:+43357137 | Msa0071450:CDS |
| CGGATCTACTGTCCACTCTT+TGG | 0.272014 | 1_2:+43357370 | Msa0071450:CDS |
| TTGGAAAGCTCTAGTGAAAA+AGG | 0.317460 | 1_2:-43355724 | None:intergenic |
| TGACGCGATTCGTGCATATA+TGG | 0.329752 | 1_2:-43357068 | None:intergenic |
| CTGTGCAAAATATCCTTATA+TGG | 0.336858 | 1_2:+43356258 | Msa0071450:CDS |
| GTATTGTCATGCCAACAAAA+TGG | 0.358807 | 1_2:+43357417 | Msa0071450:CDS |
| CCGTAAAATTGATCCATATA+AGG | 0.372097 | 1_2:-43356271 | None:intergenic |
| TCATGTTCTTTAAGATAAAC+AGG | 0.380584 | 1_2:-43355586 | None:intergenic |
| ACCTCTGACCCCGAGACGTT+TGG | 0.381733 | 1_2:-43357296 | None:intergenic |
| AGTTCTTACTCGGAGCAATT+TGG | 0.382158 | 1_2:-43355756 | None:intergenic |
| GGATCTACTGTCCACTCTTT+GGG | 0.389114 | 1_2:+43357371 | Msa0071450:CDS |
| AGCAATTTGGTCTATGTAGT+TGG | 0.394015 | 1_2:-43355743 | None:intergenic |
| TTGGGAGACATGATCGATAC+TGG | 0.406979 | 1_2:+43357389 | Msa0071450:CDS |
| TGCTTAGCATTCACGTATGT+TGG | 0.430698 | 1_2:-43356857 | None:intergenic |
| AGCTTTACTGTCAATCATAT+CGG | 0.452099 | 1_2:+43357350 | Msa0071450:CDS |
| CAAGACTCTCCTCCATAAAC+AGG | 0.453464 | 1_2:-43355688 | None:intergenic |
| GGAGGCAGTCCAAACGTCTC+GGG | 0.456102 | 1_2:+43357287 | Msa0071450:CDS |
| TTTATTCTGAAGCACAGCTT+TGG | 0.466795 | 1_2:-43356915 | None:intergenic |
| TAAGAAAATTTACCATAGGC+TGG | 0.471305 | 1_2:-43356139 | None:intergenic |
| GATAAGGTTGCTTGATGATT+CGG | 0.479300 | 1_2:-43356062 | None:intergenic |
| CCTAGCTCAAAACGATTAAG+TGG | 0.484362 | 1_2:-43356110 | None:intergenic |
| ACAAAATGGTTTGCAGCAGC+TGG | 0.492247 | 1_2:+43357431 | Msa0071450:CDS |
| AAACGACCACCGCATCCTCT+TGG | 0.498137 | 1_2:-43357110 | None:intergenic |
| AAAGTTTCTGCTAATGGAAA+CGG | 0.509349 | 1_2:+43357143 | Msa0071450:CDS |
| AGCAATACCATGGAATCATC+AGG | 0.511718 | 1_2:+43356876 | Msa0071450:CDS |
| TGGAACTTTAAATTCGTCAA+AGG | 0.512980 | 1_2:+43357256 | Msa0071450:CDS |
| AGCAGCTGGTAGACAGCTGC+TGG | 0.514662 | 1_2:+43357445 | Msa0071450:CDS |
| CCATGGTGGAGTAATGCCTA+TGG | 0.516782 | 1_2:+43355658 | Msa0071450:CDS |
| AATTCGTCAAAGGAGACAAA+CGG | 0.518779 | 1_2:+43357266 | Msa0071450:CDS |
| TTCGGAACTCTGAGAACCAC+TGG | 0.518971 | 1_2:-43357216 | None:intergenic |
| CGGAGGCAGTCCAAACGTCT+CGG | 0.528352 | 1_2:+43357286 | Msa0071450:CDS |
| GCTAATGGAAACGGTAAAAG+CGG | 0.528506 | 1_2:+43357152 | Msa0071450:CDS |
| GGAAATGTCCACAATTCTGT+TGG | 0.536104 | 1_2:+43355610 | Msa0071450:CDS |
| GGTGACTAGCATGTATTCAC+AGG | 0.537442 | 1_2:+43357316 | Msa0071450:CDS |
| GACTTATGGACCTCAAATCT+CGG | 0.538137 | 1_2:+43356303 | Msa0071450:CDS |
| CTCAAAACGATTAAGTGGCT+CGG | 0.547492 | 1_2:-43356105 | None:intergenic |
| GGCCTACAGCTGCAGTCCAG+TGG | 0.549836 | 1_2:+43357200 | Msa0071450:CDS |
| ATAAACAGGTTGAGATCCAT+AGG | 0.553524 | 1_2:-43355674 | None:intergenic |
| AACCTCAGATTGTAAGACTT+CGG | 0.557052 | 1_2:-43357234 | None:intergenic |
| TTCCGAAGTCTTACAATCTG+AGG | 0.557924 | 1_2:+43357232 | Msa0071450:CDS |
| AAATGATGATTGCAGTGATA+AGG | 0.560313 | 1_2:-43356078 | None:intergenic |
| TCCAAACGTCTCGGGGTCAG+AGG | 0.561807 | 1_2:+43357295 | Msa0071450:CDS |
| TCATCAGATGTCATGCTAAG+TGG | 0.562219 | 1_2:-43356830 | None:intergenic |
| AAAACTGTCCAACAGAATTG+TGG | 0.562402 | 1_2:-43355618 | None:intergenic |
| GTTTATCTTAAAGAACATGA+AGG | 0.564171 | 1_2:+43355589 | Msa0071450:CDS |
| CTAATGGAAACGGTAAAAGC+GGG | 0.566129 | 1_2:+43357153 | Msa0071450:CDS |
| TAAAGACAAACCGAGATTTG+AGG | 0.581306 | 1_2:-43356313 | None:intergenic |
| GAAGTCTTACAATCTGAGGT+TGG | 0.582591 | 1_2:+43357236 | Msa0071450:CDS |
| GCCTGCGCCTGATGATTCCA+TGG | 0.599554 | 1_2:-43356883 | None:intergenic |
| ATGCGTAGACCAAGAGGATG+CGG | 0.604666 | 1_2:+43357101 | Msa0071450:CDS |
| CGATCATGTCTCCCAAAGAG+TGG | 0.606030 | 1_2:-43357382 | None:intergenic |
| ACCATGGAATCATCAGGCGC+AGG | 0.620559 | 1_2:+43356882 | Msa0071450:CDS |
| GTTTATGGAGGAGAGTCTTG+TGG | 0.624514 | 1_2:+43355691 | Msa0071450:CDS |
| GAGGCAGTCCAAACGTCTCG+GGG | 0.630984 | 1_2:+43357288 | Msa0071450:CDS |
| GTGAATGCTAAGCAATACCA+TGG | 0.633070 | 1_2:+43356866 | Msa0071450:CDS |
| GGATCTCAACCTGTTTATGG+AGG | 0.650456 | 1_2:+43355679 | Msa0071450:CDS |
| TAAACTGATAAAGCGTAACA+AGG | 0.655532 | 1_2:+43356934 | Msa0071450:CDS |
| GACATGATCGATACTGGACA+CGG | 0.660565 | 1_2:+43357395 | Msa0071450:CDS |
| CTTAGCATGACATCTGATGA+CGG | 0.665381 | 1_2:+43356833 | Msa0071450:CDS |
| CATGCAATGCGTAGACCAAG+AGG | 0.668981 | 1_2:+43357095 | Msa0071450:CDS |
| CGTAGACCAAGAGGATGCGG+TGG | 0.670871 | 1_2:+43357104 | Msa0071450:CDS |
| CATCTGTGACTACAGCACCA+TGG | 0.674450 | 1_2:+43355641 | Msa0071450:CDS |
| GTGACTAGCATGTATTCACA+GGG | 0.683616 | 1_2:+43357317 | Msa0071450:CDS |
| AACCACTGGACTGCAGCTGT+AGG | 0.688049 | 1_2:-43357202 | None:intergenic |
| AGTGAAGAGAACATAAACAC+TGG | 0.692663 | 1_2:+43357176 | Msa0071450:CDS |
| CCATAGGCATTACTCCACCA+TGG | 0.694421 | 1_2:-43355658 | None:intergenic |
| GAAGAGAACATAAACACTGG+TGG | 0.703232 | 1_2:+43357179 | Msa0071450:CDS |
| CTGTGACTACAGCACCATGG+TGG | 0.710455 | 1_2:+43355644 | Msa0071450:CDS |
| ACTAGCATGTATTCACAGGG+AGG | 0.747620 | 1_2:+43357320 | Msa0071450:CDS |
| TCGTCAAAGGAGACAAACGG+AGG | 0.770276 | 1_2:+43357269 | Msa0071450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAATAAAAAAATTA+TGG | + | chr1_2:43356565-43356584 | Msa0071450:intron | 0.0% |
| !! | AAATAAAAATAAAAAAATTA+TGG | + | chr1_2:43356565-43356584 | Msa0071450:intron | 0.0% |
| !! | AAATAAAAAAATTATGGTTA+AGG | + | chr1_2:43356571-43356590 | Msa0071450:intron | 10.0% |
| !! | GTATCTATATTTAATAAATT+AGG | + | chr1_2:43356793-43356812 | Msa0071450:intron | 10.0% |
| !! | AAATAAAAAAATTATGGTTA+AGG | + | chr1_2:43356571-43356590 | Msa0071450:intron | 10.0% |
| !! | GTATCTATATTTAATAAATT+AGG | + | chr1_2:43356793-43356812 | Msa0071450:intron | 10.0% |
| !!! | CATCATATAATTCAATTTTA+AGG | - | chr1_2:43356677-43356696 | None:intergenic | 15.0% |
| !!! | CATCATATAATTCAATTTTA+AGG | - | chr1_2:43356677-43356696 | None:intergenic | 15.0% |
| !! | AAAATCAATTCATTCAAAAC+CGG | - | chr1_2:43355867-43355886 | None:intergenic | 20.0% |
| !! | TATGTAACATGATTTATGTT+CGG | + | chr1_2:43355922-43355941 | Msa0071450:intron | 20.0% |
| !! | TTGTTAAGAAAATTTACCAT+AGG | - | chr1_2:43356146-43356165 | None:intergenic | 20.0% |
| !! | GAATTTATGTACTAAAACAT+AGG | - | chr1_2:43356206-43356225 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAATGAGTTTT+AGG | + | chr1_2:43356512-43356531 | Msa0071450:intron | 20.0% |
| !! | ATAGGTATAAAAAGAGTAAA+AGG | - | chr1_2:43357022-43357041 | None:intergenic | 20.0% |
| !!! | CTCTTTTTATACCTATATTA+AGG | + | chr1_2:43357026-43357045 | Msa0071450:intron | 20.0% |
| !! | CAAATACAAAACCTTAATAT+AGG | - | chr1_2:43357040-43357059 | None:intergenic | 20.0% |
| !! | AAAATCAATTCATTCAAAAC+CGG | - | chr1_2:43355867-43355886 | None:intergenic | 20.0% |
| !! | TATGTAACATGATTTATGTT+CGG | + | chr1_2:43355922-43355941 | Msa0071450:intron | 20.0% |
| !! | TTGTTAAGAAAATTTACCAT+AGG | - | chr1_2:43356146-43356165 | None:intergenic | 20.0% |
| !! | GAATTTATGTACTAAAACAT+AGG | - | chr1_2:43356206-43356225 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAATGAGTTTT+AGG | + | chr1_2:43356512-43356531 | Msa0071450:intron | 20.0% |
| !! | ATAGGTATAAAAAGAGTAAA+AGG | - | chr1_2:43357022-43357041 | None:intergenic | 20.0% |
| !!! | CTCTTTTTATACCTATATTA+AGG | + | chr1_2:43357026-43357045 | Msa0071450:intron | 20.0% |
| !! | CAAATACAAAACCTTAATAT+AGG | - | chr1_2:43357040-43357059 | None:intergenic | 20.0% |
| !!! | TCATGTTCTTTAAGATAAAC+AGG | - | chr1_2:43355589-43355608 | None:intergenic | 25.0% |
| ! | GTTTATCTTAAAGAACATGA+AGG | + | chr1_2:43355589-43355608 | Msa0071450:CDS | 25.0% |
| ! | GTTGAACAATTGTTTGATAA+AGG | + | chr1_2:43355790-43355809 | Msa0071450:intron | 25.0% |
| !!! | GATTTTTGTTAAGTTGATTC+TGG | + | chr1_2:43355881-43355900 | Msa0071450:intron | 25.0% |
| ! | TGTAGAAGAAAATGTTTGAA+TGG | - | chr1_2:43356015-43356034 | None:intergenic | 25.0% |
| !! | CCTTATATGGATCAATTTTA+CGG | + | chr1_2:43356271-43356290 | Msa0071450:CDS | 25.0% |
| !! | CTTATATGGATCAATTTTAC+GGG | + | chr1_2:43356272-43356291 | Msa0071450:CDS | 25.0% |
| ! | AACACAAATGAGAAGAAAAT+TGG | + | chr1_2:43356633-43356652 | Msa0071450:intron | 25.0% |
| !!! | ATGTATTCAAGTTCTACTTT+TGG | + | chr1_2:43356719-43356738 | Msa0071450:intron | 25.0% |
| !!! | TCATGTTCTTTAAGATAAAC+AGG | - | chr1_2:43355589-43355608 | None:intergenic | 25.0% |
| ! | GTTTATCTTAAAGAACATGA+AGG | + | chr1_2:43355589-43355608 | Msa0071450:CDS | 25.0% |
| ! | GTTGAACAATTGTTTGATAA+AGG | + | chr1_2:43355790-43355809 | Msa0071450:intron | 25.0% |
| !!! | GATTTTTGTTAAGTTGATTC+TGG | + | chr1_2:43355881-43355900 | Msa0071450:intron | 25.0% |
| ! | TGTAGAAGAAAATGTTTGAA+TGG | - | chr1_2:43356015-43356034 | None:intergenic | 25.0% |
| !! | CCTTATATGGATCAATTTTA+CGG | + | chr1_2:43356271-43356290 | Msa0071450:CDS | 25.0% |
| !! | CTTATATGGATCAATTTTAC+GGG | + | chr1_2:43356272-43356291 | Msa0071450:CDS | 25.0% |
| ! | AACACAAATGAGAAGAAAAT+TGG | + | chr1_2:43356633-43356652 | Msa0071450:intron | 25.0% |
| !!! | ATGTATTCAAGTTCTACTTT+TGG | + | chr1_2:43356719-43356738 | Msa0071450:intron | 25.0% |
| CTAGTGAAAAAGGTTTCATT+TGG | - | chr1_2:43355717-43355736 | None:intergenic | 30.0% | |
| TATATCGAATAACAAGTACC+TGG | - | chr1_2:43355841-43355860 | None:intergenic | 30.0% | |
| !! | CTTGTTATTCGATATAACTC+CGG | + | chr1_2:43355845-43355864 | Msa0071450:intron | 30.0% |
| AAATGATGATTGCAGTGATA+AGG | - | chr1_2:43356081-43356100 | None:intergenic | 30.0% | |
| TAAGAAAATTTACCATAGGC+TGG | - | chr1_2:43356142-43356161 | None:intergenic | 30.0% | |
| TTATGTACTAAAACATAGGC+TGG | - | chr1_2:43356202-43356221 | None:intergenic | 30.0% | |
| CTGTGCAAAATATCCTTATA+TGG | + | chr1_2:43356258-43356277 | Msa0071450:CDS | 30.0% | |
| CCGTAAAATTGATCCATATA+AGG | - | chr1_2:43356274-43356293 | None:intergenic | 30.0% | |
| GATAGTTGTAAACAGATTTC+TGG | - | chr1_2:43356443-43356462 | None:intergenic | 30.0% | |
| TAAACTGATAAAGCGTAACA+AGG | + | chr1_2:43356934-43356953 | Msa0071450:CDS | 30.0% | |
| ! | GTTTTCAAACATTGTTGTGA+GGG | - | chr1_2:43356979-43356998 | None:intergenic | 30.0% |
| ! | AGTTTTCAAACATTGTTGTG+AGG | - | chr1_2:43356980-43356999 | None:intergenic | 30.0% |
| AACACAAAAGTTTCTGCTAA+TGG | + | chr1_2:43357137-43357156 | Msa0071450:CDS | 30.0% | |
| AAAGTTTCTGCTAATGGAAA+CGG | + | chr1_2:43357143-43357162 | Msa0071450:CDS | 30.0% | |
| TGGAACTTTAAATTCGTCAA+AGG | + | chr1_2:43357256-43357275 | Msa0071450:CDS | 30.0% | |
| AGCTTTACTGTCAATCATAT+CGG | + | chr1_2:43357350-43357369 | Msa0071450:CDS | 30.0% | |
| CTAGTGAAAAAGGTTTCATT+TGG | - | chr1_2:43355717-43355736 | None:intergenic | 30.0% | |
| TATATCGAATAACAAGTACC+TGG | - | chr1_2:43355841-43355860 | None:intergenic | 30.0% | |
| !! | CTTGTTATTCGATATAACTC+CGG | + | chr1_2:43355845-43355864 | Msa0071450:intron | 30.0% |
| AAATGATGATTGCAGTGATA+AGG | - | chr1_2:43356081-43356100 | None:intergenic | 30.0% | |
| TAAGAAAATTTACCATAGGC+TGG | - | chr1_2:43356142-43356161 | None:intergenic | 30.0% | |
| TTATGTACTAAAACATAGGC+TGG | - | chr1_2:43356202-43356221 | None:intergenic | 30.0% | |
| CTGTGCAAAATATCCTTATA+TGG | + | chr1_2:43356258-43356277 | Msa0071450:CDS | 30.0% | |
| CCGTAAAATTGATCCATATA+AGG | - | chr1_2:43356274-43356293 | None:intergenic | 30.0% | |
| GATAGTTGTAAACAGATTTC+TGG | - | chr1_2:43356443-43356462 | None:intergenic | 30.0% | |
| TAAACTGATAAAGCGTAACA+AGG | + | chr1_2:43356934-43356953 | Msa0071450:CDS | 30.0% | |
| ! | GTTTTCAAACATTGTTGTGA+GGG | - | chr1_2:43356979-43356998 | None:intergenic | 30.0% |
| ! | AGTTTTCAAACATTGTTGTG+AGG | - | chr1_2:43356980-43356999 | None:intergenic | 30.0% |
| AACACAAAAGTTTCTGCTAA+TGG | + | chr1_2:43357137-43357156 | Msa0071450:CDS | 30.0% | |
| AAAGTTTCTGCTAATGGAAA+CGG | + | chr1_2:43357143-43357162 | Msa0071450:CDS | 30.0% | |
| TGGAACTTTAAATTCGTCAA+AGG | + | chr1_2:43357256-43357275 | Msa0071450:CDS | 30.0% | |
| AGCTTTACTGTCAATCATAT+CGG | + | chr1_2:43357350-43357369 | Msa0071450:CDS | 30.0% | |
| AAAACTGTCCAACAGAATTG+TGG | - | chr1_2:43355621-43355640 | None:intergenic | 35.0% | |
| ! | ATAAACAGGTTGAGATCCAT+AGG | - | chr1_2:43355677-43355696 | None:intergenic | 35.0% |
| TATGGATCTCAACCTGTTTA+TGG | + | chr1_2:43355676-43355695 | Msa0071450:CDS | 35.0% | |
| ! | TTGGAAAGCTCTAGTGAAAA+AGG | - | chr1_2:43355727-43355746 | None:intergenic | 35.0% |
| AGCAATTTGGTCTATGTAGT+TGG | - | chr1_2:43355746-43355765 | None:intergenic | 35.0% | |
| ATAACAAGTACCTGGAAAGA+TGG | - | chr1_2:43355833-43355852 | None:intergenic | 35.0% | |
| ! | AAGTTGATTCTGGCTAAACA+TGG | + | chr1_2:43355891-43355910 | Msa0071450:intron | 35.0% |
| AAGAAAATGTTTGAATGGCC+AGG | - | chr1_2:43356010-43356029 | None:intergenic | 35.0% | |
| ! | GATAAGGTTGCTTGATGATT+CGG | - | chr1_2:43356065-43356084 | None:intergenic | 35.0% |
| ! | TATTTTGCACAGATCTAGCA+TGG | - | chr1_2:43356250-43356269 | None:intergenic | 35.0% |
| TAAAGACAAACCGAGATTTG+AGG | - | chr1_2:43356316-43356335 | None:intergenic | 35.0% | |
| AATGATTAAGAAAAGAGCCG+AGG | - | chr1_2:43356339-43356358 | None:intergenic | 35.0% | |
| ATCTGCAGCAGATAAACAAA+TGG | - | chr1_2:43356748-43356767 | None:intergenic | 35.0% | |
| !! | TTTATTCTGAAGCACAGCTT+TGG | - | chr1_2:43356918-43356937 | None:intergenic | 35.0% |
| AGTGAAGAGAACATAAACAC+TGG | + | chr1_2:43357176-43357195 | Msa0071450:CDS | 35.0% | |
| AACCTCAGATTGTAAGACTT+CGG | - | chr1_2:43357237-43357256 | None:intergenic | 35.0% | |
| AATTCGTCAAAGGAGACAAA+CGG | + | chr1_2:43357266-43357285 | Msa0071450:CDS | 35.0% | |
| GTATTGTCATGCCAACAAAA+TGG | + | chr1_2:43357417-43357436 | Msa0071450:CDS | 35.0% | |
| AAAACTGTCCAACAGAATTG+TGG | - | chr1_2:43355621-43355640 | None:intergenic | 35.0% | |
| ! | ATAAACAGGTTGAGATCCAT+AGG | - | chr1_2:43355677-43355696 | None:intergenic | 35.0% |
| TATGGATCTCAACCTGTTTA+TGG | + | chr1_2:43355676-43355695 | Msa0071450:CDS | 35.0% | |
| ! | TTGGAAAGCTCTAGTGAAAA+AGG | - | chr1_2:43355727-43355746 | None:intergenic | 35.0% |
| AGCAATTTGGTCTATGTAGT+TGG | - | chr1_2:43355746-43355765 | None:intergenic | 35.0% | |
| ATAACAAGTACCTGGAAAGA+TGG | - | chr1_2:43355833-43355852 | None:intergenic | 35.0% | |
| ! | AAGTTGATTCTGGCTAAACA+TGG | + | chr1_2:43355891-43355910 | Msa0071450:intron | 35.0% |
| AAGAAAATGTTTGAATGGCC+AGG | - | chr1_2:43356010-43356029 | None:intergenic | 35.0% | |
| ! | GATAAGGTTGCTTGATGATT+CGG | - | chr1_2:43356065-43356084 | None:intergenic | 35.0% |
| ! | TATTTTGCACAGATCTAGCA+TGG | - | chr1_2:43356250-43356269 | None:intergenic | 35.0% |
| TAAAGACAAACCGAGATTTG+AGG | - | chr1_2:43356316-43356335 | None:intergenic | 35.0% | |
| AATGATTAAGAAAAGAGCCG+AGG | - | chr1_2:43356339-43356358 | None:intergenic | 35.0% | |
| ATCTGCAGCAGATAAACAAA+TGG | - | chr1_2:43356748-43356767 | None:intergenic | 35.0% | |
| !! | TTTATTCTGAAGCACAGCTT+TGG | - | chr1_2:43356918-43356937 | None:intergenic | 35.0% |
| AGTGAAGAGAACATAAACAC+TGG | + | chr1_2:43357176-43357195 | Msa0071450:CDS | 35.0% | |
| AACCTCAGATTGTAAGACTT+CGG | - | chr1_2:43357237-43357256 | None:intergenic | 35.0% | |
| AATTCGTCAAAGGAGACAAA+CGG | + | chr1_2:43357266-43357285 | Msa0071450:CDS | 35.0% | |
| GTATTGTCATGCCAACAAAA+TGG | + | chr1_2:43357417-43357436 | Msa0071450:CDS | 35.0% | |
| GGAAATGTCCACAATTCTGT+TGG | + | chr1_2:43355610-43355629 | Msa0071450:CDS | 40.0% | |
| AGTTCTTACTCGGAGCAATT+TGG | - | chr1_2:43355759-43355778 | None:intergenic | 40.0% | |
| CCTCGAACTAAGTTCTTACT+CGG | - | chr1_2:43355769-43355788 | None:intergenic | 40.0% | |
| AACCAATTCACCATCTTTCC+AGG | + | chr1_2:43355820-43355839 | Msa0071450:intron | 40.0% | |
| TACCTGGAAAGATGGTGAAT+TGG | - | chr1_2:43355825-43355844 | None:intergenic | 40.0% | |
| ! | CTTTTGAACTTTCCTATGCC+TGG | + | chr1_2:43355989-43356008 | Msa0071450:intron | 40.0% |
| CTCAAAACGATTAAGTGGCT+CGG | - | chr1_2:43356108-43356127 | None:intergenic | 40.0% | |
| CCTAGCTCAAAACGATTAAG+TGG | - | chr1_2:43356113-43356132 | None:intergenic | 40.0% | |
| !! | CCACTTAATCGTTTTGAGCT+AGG | + | chr1_2:43356110-43356129 | Msa0071450:CDS | 40.0% |
| GACTTATGGACCTCAAATCT+CGG | + | chr1_2:43356303-43356322 | Msa0071450:CDS | 40.0% | |
| ! | ATCTCGGTTTGTCTTTACCT+CGG | + | chr1_2:43356319-43356338 | Msa0071450:intron | 40.0% |
| TCATCAGATGTCATGCTAAG+TGG | - | chr1_2:43356833-43356852 | None:intergenic | 40.0% | |
| CTTAGCATGACATCTGATGA+CGG | + | chr1_2:43356833-43356852 | Msa0071450:CDS | 40.0% | |
| TGCTTAGCATTCACGTATGT+TGG | - | chr1_2:43356860-43356879 | None:intergenic | 40.0% | |
| GTGAATGCTAAGCAATACCA+TGG | + | chr1_2:43356866-43356885 | Msa0071450:CDS | 40.0% | |
| AGCAATACCATGGAATCATC+AGG | + | chr1_2:43356876-43356895 | Msa0071450:CDS | 40.0% | |
| GCTAATGGAAACGGTAAAAG+CGG | + | chr1_2:43357152-43357171 | Msa0071450:CDS | 40.0% | |
| CTAATGGAAACGGTAAAAGC+GGG | + | chr1_2:43357153-43357172 | Msa0071450:CDS | 40.0% | |
| GAAGAGAACATAAACACTGG+TGG | + | chr1_2:43357179-43357198 | Msa0071450:CDS | 40.0% | |
| TTCCGAAGTCTTACAATCTG+AGG | + | chr1_2:43357232-43357251 | Msa0071450:CDS | 40.0% | |
| ! | GAAGTCTTACAATCTGAGGT+TGG | + | chr1_2:43357236-43357255 | Msa0071450:CDS | 40.0% |
| GTGACTAGCATGTATTCACA+GGG | + | chr1_2:43357317-43357336 | Msa0071450:CDS | 40.0% | |
| GGAAATGTCCACAATTCTGT+TGG | + | chr1_2:43355610-43355629 | Msa0071450:CDS | 40.0% | |
| AGTTCTTACTCGGAGCAATT+TGG | - | chr1_2:43355759-43355778 | None:intergenic | 40.0% | |
| CCTCGAACTAAGTTCTTACT+CGG | - | chr1_2:43355769-43355788 | None:intergenic | 40.0% | |
| AACCAATTCACCATCTTTCC+AGG | + | chr1_2:43355820-43355839 | Msa0071450:intron | 40.0% | |
| TACCTGGAAAGATGGTGAAT+TGG | - | chr1_2:43355825-43355844 | None:intergenic | 40.0% | |
| ! | CTTTTGAACTTTCCTATGCC+TGG | + | chr1_2:43355989-43356008 | Msa0071450:intron | 40.0% |
| CTCAAAACGATTAAGTGGCT+CGG | - | chr1_2:43356108-43356127 | None:intergenic | 40.0% | |
| CCTAGCTCAAAACGATTAAG+TGG | - | chr1_2:43356113-43356132 | None:intergenic | 40.0% | |
| !! | CCACTTAATCGTTTTGAGCT+AGG | + | chr1_2:43356110-43356129 | Msa0071450:CDS | 40.0% |
| GACTTATGGACCTCAAATCT+CGG | + | chr1_2:43356303-43356322 | Msa0071450:CDS | 40.0% | |
| ! | ATCTCGGTTTGTCTTTACCT+CGG | + | chr1_2:43356319-43356338 | Msa0071450:intron | 40.0% |
| TCATCAGATGTCATGCTAAG+TGG | - | chr1_2:43356833-43356852 | None:intergenic | 40.0% | |
| CTTAGCATGACATCTGATGA+CGG | + | chr1_2:43356833-43356852 | Msa0071450:CDS | 40.0% | |
| TGCTTAGCATTCACGTATGT+TGG | - | chr1_2:43356860-43356879 | None:intergenic | 40.0% | |
| GTGAATGCTAAGCAATACCA+TGG | + | chr1_2:43356866-43356885 | Msa0071450:CDS | 40.0% | |
| AGCAATACCATGGAATCATC+AGG | + | chr1_2:43356876-43356895 | Msa0071450:CDS | 40.0% | |
| GCTAATGGAAACGGTAAAAG+CGG | + | chr1_2:43357152-43357171 | Msa0071450:CDS | 40.0% | |
| CTAATGGAAACGGTAAAAGC+GGG | + | chr1_2:43357153-43357172 | Msa0071450:CDS | 40.0% | |
| GAAGAGAACATAAACACTGG+TGG | + | chr1_2:43357179-43357198 | Msa0071450:CDS | 40.0% | |
| TTCCGAAGTCTTACAATCTG+AGG | + | chr1_2:43357232-43357251 | Msa0071450:CDS | 40.0% | |
| ! | GAAGTCTTACAATCTGAGGT+TGG | + | chr1_2:43357236-43357255 | Msa0071450:CDS | 40.0% |
| GTGACTAGCATGTATTCACA+GGG | + | chr1_2:43357317-43357336 | Msa0071450:CDS | 40.0% | |
| GGATCTCAACCTGTTTATGG+AGG | + | chr1_2:43355679-43355698 | Msa0071450:CDS | 45.0% | |
| CAAGACTCTCCTCCATAAAC+AGG | - | chr1_2:43355691-43355710 | None:intergenic | 45.0% | |
| GTTTATGGAGGAGAGTCTTG+TGG | + | chr1_2:43355691-43355710 | Msa0071450:CDS | 45.0% | |
| CCGAGTAAGAACTTAGTTCG+AGG | + | chr1_2:43355766-43355785 | Msa0071450:intron | 45.0% | |
| ATGTTTGAATGGCCAGGCAT+AGG | - | chr1_2:43356004-43356023 | None:intergenic | 45.0% | |
| !! | GCTAGGTTTTAACCAGCCTA+TGG | + | chr1_2:43356127-43356146 | Msa0071450:CDS | 45.0% |
| TGCACAGATCTAGCATGGAA+AGG | - | chr1_2:43356245-43356264 | None:intergenic | 45.0% | |
| TGACGCGATTCGTGCATATA+TGG | - | chr1_2:43357071-43357090 | None:intergenic | 45.0% | |
| GGTGACTAGCATGTATTCAC+AGG | + | chr1_2:43357316-43357335 | Msa0071450:CDS | 45.0% | |
| ACTAGCATGTATTCACAGGG+AGG | + | chr1_2:43357320-43357339 | Msa0071450:CDS | 45.0% | |
| GGATCTACTGTCCACTCTTT+GGG | + | chr1_2:43357371-43357390 | Msa0071450:CDS | 45.0% | |
| TTGGGAGACATGATCGATAC+TGG | + | chr1_2:43357389-43357408 | Msa0071450:CDS | 45.0% | |
| GACATGATCGATACTGGACA+CGG | + | chr1_2:43357395-43357414 | Msa0071450:CDS | 45.0% | |
| ! | GCTGCTGCAAACCATTTTGT+TGG | - | chr1_2:43357431-43357450 | None:intergenic | 45.0% |
| ! | ACAAAATGGTTTGCAGCAGC+TGG | + | chr1_2:43357431-43357450 | Msa0071450:CDS | 45.0% |
| GGATCTCAACCTGTTTATGG+AGG | + | chr1_2:43355679-43355698 | Msa0071450:CDS | 45.0% | |
| CAAGACTCTCCTCCATAAAC+AGG | - | chr1_2:43355691-43355710 | None:intergenic | 45.0% | |
| GTTTATGGAGGAGAGTCTTG+TGG | + | chr1_2:43355691-43355710 | Msa0071450:CDS | 45.0% | |
| CCGAGTAAGAACTTAGTTCG+AGG | + | chr1_2:43355766-43355785 | Msa0071450:intron | 45.0% | |
| ATGTTTGAATGGCCAGGCAT+AGG | - | chr1_2:43356004-43356023 | None:intergenic | 45.0% | |
| !! | GCTAGGTTTTAACCAGCCTA+TGG | + | chr1_2:43356127-43356146 | Msa0071450:CDS | 45.0% |
| TGCACAGATCTAGCATGGAA+AGG | - | chr1_2:43356245-43356264 | None:intergenic | 45.0% | |
| TGACGCGATTCGTGCATATA+TGG | - | chr1_2:43357071-43357090 | None:intergenic | 45.0% | |
| GGTGACTAGCATGTATTCAC+AGG | + | chr1_2:43357316-43357335 | Msa0071450:CDS | 45.0% | |
| ACTAGCATGTATTCACAGGG+AGG | + | chr1_2:43357320-43357339 | Msa0071450:CDS | 45.0% | |
| GGATCTACTGTCCACTCTTT+GGG | + | chr1_2:43357371-43357390 | Msa0071450:CDS | 45.0% | |
| TTGGGAGACATGATCGATAC+TGG | + | chr1_2:43357389-43357408 | Msa0071450:CDS | 45.0% | |
| GACATGATCGATACTGGACA+CGG | + | chr1_2:43357395-43357414 | Msa0071450:CDS | 45.0% | |
| ! | GCTGCTGCAAACCATTTTGT+TGG | - | chr1_2:43357431-43357450 | None:intergenic | 45.0% |
| ! | ACAAAATGGTTTGCAGCAGC+TGG | + | chr1_2:43357431-43357450 | Msa0071450:CDS | 45.0% |
| !! | TATCTATATTTAATAAATTA+GGG | + | chr1_2:43356794-43356813 | Msa0071450:intron | 5.0% |
| !! | TATCTATATTTAATAAATTA+GGG | + | chr1_2:43356794-43356813 | Msa0071450:intron | 5.0% |
| CATCTGTGACTACAGCACCA+TGG | + | chr1_2:43355641-43355660 | Msa0071450:CDS | 50.0% | |
| CCATAGGCATTACTCCACCA+TGG | - | chr1_2:43355661-43355680 | None:intergenic | 50.0% | |
| ! | CCATGGTGGAGTAATGCCTA+TGG | + | chr1_2:43355658-43355677 | Msa0071450:CDS | 50.0% |
| TACGGGCTCTTCTCGACTTA+TGG | + | chr1_2:43356289-43356308 | Msa0071450:CDS | 50.0% | |
| CATGCAATGCGTAGACCAAG+AGG | + | chr1_2:43357095-43357114 | Msa0071450:CDS | 50.0% | |
| ATGCGTAGACCAAGAGGATG+CGG | + | chr1_2:43357101-43357120 | Msa0071450:CDS | 50.0% | |
| ! | TTCGGAACTCTGAGAACCAC+TGG | - | chr1_2:43357219-43357238 | None:intergenic | 50.0% |
| TCGTCAAAGGAGACAAACGG+AGG | + | chr1_2:43357269-43357288 | Msa0071450:CDS | 50.0% | |
| CGGATCTACTGTCCACTCTT+TGG | + | chr1_2:43357370-43357389 | Msa0071450:CDS | 50.0% | |
| CGATCATGTCTCCCAAAGAG+TGG | - | chr1_2:43357385-43357404 | None:intergenic | 50.0% | |
| CATCTGTGACTACAGCACCA+TGG | + | chr1_2:43355641-43355660 | Msa0071450:CDS | 50.0% | |
| CCATAGGCATTACTCCACCA+TGG | - | chr1_2:43355661-43355680 | None:intergenic | 50.0% | |
| ! | CCATGGTGGAGTAATGCCTA+TGG | + | chr1_2:43355658-43355677 | Msa0071450:CDS | 50.0% |
| TACGGGCTCTTCTCGACTTA+TGG | + | chr1_2:43356289-43356308 | Msa0071450:CDS | 50.0% | |
| CATGCAATGCGTAGACCAAG+AGG | + | chr1_2:43357095-43357114 | Msa0071450:CDS | 50.0% | |
| ATGCGTAGACCAAGAGGATG+CGG | + | chr1_2:43357101-43357120 | Msa0071450:CDS | 50.0% | |
| ! | TTCGGAACTCTGAGAACCAC+TGG | - | chr1_2:43357219-43357238 | None:intergenic | 50.0% |
| TCGTCAAAGGAGACAAACGG+AGG | + | chr1_2:43357269-43357288 | Msa0071450:CDS | 50.0% | |
| CGGATCTACTGTCCACTCTT+TGG | + | chr1_2:43357370-43357389 | Msa0071450:CDS | 50.0% | |
| CGATCATGTCTCCCAAAGAG+TGG | - | chr1_2:43357385-43357404 | None:intergenic | 50.0% | |
| CTGTGACTACAGCACCATGG+TGG | + | chr1_2:43355644-43355663 | Msa0071450:CDS | 55.0% | |
| ACCATGGAATCATCAGGCGC+AGG | + | chr1_2:43356882-43356901 | Msa0071450:CDS | 55.0% | |
| AAACGACCACCGCATCCTCT+TGG | - | chr1_2:43357113-43357132 | None:intergenic | 55.0% | |
| AACCACTGGACTGCAGCTGT+AGG | - | chr1_2:43357205-43357224 | None:intergenic | 55.0% | |
| CTGTGACTACAGCACCATGG+TGG | + | chr1_2:43355644-43355663 | Msa0071450:CDS | 55.0% | |
| ACCATGGAATCATCAGGCGC+AGG | + | chr1_2:43356882-43356901 | Msa0071450:CDS | 55.0% | |
| AAACGACCACCGCATCCTCT+TGG | - | chr1_2:43357113-43357132 | None:intergenic | 55.0% | |
| AACCACTGGACTGCAGCTGT+AGG | - | chr1_2:43357205-43357224 | None:intergenic | 55.0% | |
| GCCTGCGCCTGATGATTCCA+TGG | - | chr1_2:43356886-43356905 | None:intergenic | 60.0% | |
| CGTAGACCAAGAGGATGCGG+TGG | + | chr1_2:43357104-43357123 | Msa0071450:CDS | 60.0% | |
| CGGAGGCAGTCCAAACGTCT+CGG | + | chr1_2:43357286-43357305 | Msa0071450:CDS | 60.0% | |
| GGAGGCAGTCCAAACGTCTC+GGG | + | chr1_2:43357287-43357306 | Msa0071450:CDS | 60.0% | |
| GAGGCAGTCCAAACGTCTCG+GGG | + | chr1_2:43357288-43357307 | Msa0071450:CDS | 60.0% | |
| TCCAAACGTCTCGGGGTCAG+AGG | + | chr1_2:43357295-43357314 | Msa0071450:CDS | 60.0% | |
| ACCTCTGACCCCGAGACGTT+TGG | - | chr1_2:43357299-43357318 | None:intergenic | 60.0% | |
| AGCAGCTGGTAGACAGCTGC+TGG | + | chr1_2:43357445-43357464 | Msa0071450:CDS | 60.0% | |
| GCCTGCGCCTGATGATTCCA+TGG | - | chr1_2:43356886-43356905 | None:intergenic | 60.0% | |
| CGTAGACCAAGAGGATGCGG+TGG | + | chr1_2:43357104-43357123 | Msa0071450:CDS | 60.0% | |
| CGGAGGCAGTCCAAACGTCT+CGG | + | chr1_2:43357286-43357305 | Msa0071450:CDS | 60.0% | |
| GGAGGCAGTCCAAACGTCTC+GGG | + | chr1_2:43357287-43357306 | Msa0071450:CDS | 60.0% | |
| GAGGCAGTCCAAACGTCTCG+GGG | + | chr1_2:43357288-43357307 | Msa0071450:CDS | 60.0% | |
| TCCAAACGTCTCGGGGTCAG+AGG | + | chr1_2:43357295-43357314 | Msa0071450:CDS | 60.0% | |
| ACCTCTGACCCCGAGACGTT+TGG | - | chr1_2:43357299-43357318 | None:intergenic | 60.0% | |
| AGCAGCTGGTAGACAGCTGC+TGG | + | chr1_2:43357445-43357464 | Msa0071450:CDS | 60.0% | |
| GGCCTACAGCTGCAGTCCAG+TGG | + | chr1_2:43357200-43357219 | Msa0071450:CDS | 65.0% | |
| GGCCTACAGCTGCAGTCCAG+TGG | + | chr1_2:43357200-43357219 | Msa0071450:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 43355574 | 43357475 | 43355574 | ID=Msa0071450;Name=Msa0071450 |
| chr1_2 | mRNA | 43355574 | 43357475 | 43355574 | ID=Msa0071450-mRNA-1;Parent=Msa0071450;Name=Msa0071450-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|1|1|1|5|0|308 |
| chr1_2 | exon | 43355574 | 43355769 | 43355574 | ID=Msa0071450-mRNA-1:exon:13066;Parent=Msa0071450-mRNA-1 |
| chr1_2 | exon | 43356036 | 43356148 | 43356036 | ID=Msa0071450-mRNA-1:exon:13067;Parent=Msa0071450-mRNA-1 |
| chr1_2 | exon | 43356256 | 43356324 | 43356256 | ID=Msa0071450-mRNA-1:exon:13068;Parent=Msa0071450-mRNA-1 |
| chr1_2 | exon | 43356815 | 43356955 | 43356815 | ID=Msa0071450-mRNA-1:exon:13069;Parent=Msa0071450-mRNA-1 |
| chr1_2 | exon | 43357068 | 43357475 | 43357068 | ID=Msa0071450-mRNA-1:exon:13070;Parent=Msa0071450-mRNA-1 |
| chr1_2 | CDS | 43355574 | 43355769 | 43355574 | ID=Msa0071450-mRNA-1:cds;Parent=Msa0071450-mRNA-1 |
| chr1_2 | CDS | 43356036 | 43356148 | 43356036 | ID=Msa0071450-mRNA-1:cds;Parent=Msa0071450-mRNA-1 |
| chr1_2 | CDS | 43356256 | 43356324 | 43356256 | ID=Msa0071450-mRNA-1:cds;Parent=Msa0071450-mRNA-1 |
| chr1_2 | CDS | 43356815 | 43356955 | 43356815 | ID=Msa0071450-mRNA-1:cds;Parent=Msa0071450-mRNA-1 |
| chr1_2 | CDS | 43357068 | 43357475 | 43357068 | ID=Msa0071450-mRNA-1:cds;Parent=Msa0071450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
