AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074640 MtrunA17_Chr1g0188911 62.431 181 34 5 249 398 17 194 1.58e-63 202
Msa0074640 MtrunA17_Chr1g0188911 47.755 245 65 7 1 244 1 183 1.40e-43 150
Msa0074640 MtrunA17_Chr1g0188901 68.098 163 40 4 244 398 28 186 1.94e-52 173
Msa0074640 MtrunA17_Chr1g0188901 55.618 178 35 5 1 137 1 175 1.56e-36 131
Msa0074640 MtrunA17_Chr1g0188901 52.000 150 28 4 137 244 28 175 3.67e-23 95.9
Msa0074640 MtrunA17_Chr1g0197281 50.595 168 50 7 259 396 135 299 2.05e-35 133
Msa0074640 MtrunA17_Chr1g0197281 38.095 168 66 6 84 245 155 290 3.34e-18 85.1
Msa0074640 MtrunA17_Chr1g0197281 61.765 68 17 2 77 138 226 290 1.05e-15 77.8
Msa0074640 MtrunA17_Chr7g0263121 41.935 124 53 5 278 397 44 152 1.56e-19 85.5
Msa0074640 MtrunA17_Chr7g0263131 40.650 123 57 4 278 397 34 143 1.21e-18 82.8
Msa0074640 MtrunA17_Chr1g0182161 38.710 124 60 3 278 397 39 150 1.55e-18 82.4
Msa0074640 MtrunA17_Chr2g0320311 36.184 152 66 4 275 396 126 276 1.01e-17 83.2
Msa0074640 MtrunA17_Chr1g0212561 46.914 81 37 1 277 357 44 118 5.39e-17 79.0
Msa0074640 MtrunA17_Chr1g0180311 34.839 155 69 3 271 396 113 264 2.73e-16 79.0
Msa0074640 MtrunA17_Chr7g0222831 49.398 83 31 2 277 359 39 110 1.17e-15 74.7
Msa0074640 MtrunA17_Chr2g0327901 36.207 116 46 2 278 393 34 121 1.59e-15 72.8
Msa0074640 MtrunA17_Chr1g0182181 38.710 124 59 5 278 397 35 145 3.07e-15 73.2
Msa0074640 MtrunA17_Chr5g0448611 31.068 206 88 7 194 362 50 238 9.42e-14 71.2
Msa0074640 MtrunA17_Chr4g0012691 41.975 81 46 1 278 357 220 300 6.18e-13 69.7
Msa0074640 MtrunA17_Chr1g0207451 40.000 80 39 1 278 357 83 153 5.11e-11 62.8
Msa0074640 MtrunA17_Chr1g0152661 33.613 119 72 2 278 396 81 192 5.85e-11 62.0
Msa0074640 MtrunA17_Chr5g0425411 26.733 202 95 7 194 365 36 214 6.63e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074640 AT3G10470.1 42.775 173 48 8 273 396 177 347 1.81e-26 110
Msa0074640 AT5G04390.1 41.081 185 60 8 256 396 136 315 5.27e-25 105
Msa0074640 AT2G28200.1 42.208 154 59 6 271 396 108 259 5.88e-25 103
Msa0074640 AT2G28200.1 33.766 154 64 6 76 227 106 223 3.67e-12 67.0
Msa0074640 AT2G37430.1 40.602 133 56 5 271 397 40 155 2.35e-18 82.4
Msa0074640 AT5G03510.1 36.620 142 70 3 276 397 116 257 3.18e-17 82.0
Msa0074640 AT3G53600.1 28.902 173 101 5 228 398 1 153 1.85e-16 77.0
Msa0074640 AT5G59820.1 36.496 137 62 5 264 395 31 147 4.55e-15 72.8
Msa0074640 AT3G46090.1 36.585 123 63 2 276 394 38 149 6.75e-15 72.4
Msa0074640 AT3G46080.1 43.902 82 37 1 276 357 35 107 6.78e-14 69.7
Msa0074640 AT2G28710.1 39.216 102 43 3 256 357 18 100 1.94e-13 68.2
Msa0074640 AT3G60580.1 47.500 80 36 2 278 357 173 246 1.06e-12 68.6
Msa0074640 AT3G49930.1 42.353 85 37 2 278 357 94 171 1.64e-12 66.6
Msa0074640 AT2G45120.1 35.000 120 65 2 278 397 194 300 1.83e-12 68.2
Msa0074640 AT1G02030.1 38.372 86 45 1 274 359 156 233 6.12e-12 65.9
Msa0074640 AT3G46070.1 38.095 84 45 1 274 357 32 108 7.51e-12 63.9
Msa0074640 AT5G04340.1 38.554 83 49 1 277 357 88 170 8.72e-12 65.1
Msa0074640 AT5G43170.1 43.750 80 31 3 278 357 75 140 1.71e-11 63.5
Msa0074640 AT5G67450.1 38.889 90 45 2 278 357 97 186 2.83e-11 63.5
Msa0074640 AT1G27730.1 43.210 81 43 2 278 357 80 158 4.95e-11 62.8

Find 123 sgRNAs with CRISPR-Local

Find 946 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAACAAATCCAACGTTTA+TGG 0.181089 1_2:+49378707 Msa0074640:CDS
AACAACAAATCCAACGTTTA+TGG 0.181089 1_2:+49385497 Msa0074640:CDS
AACAACAAATCCAACGTTTA+TGG 0.181089 1_2:+49392285 Msa0074640:CDS
AACGAATGTCTCTTTGGATT+TGG 0.231339 1_2:+49392452 Msa0074640:CDS
ATTCACTTTGGTGACATTAA+TGG 0.242417 1_2:-49378414 None:intergenic
CTCATTAACACCAATGGCTT+TGG 0.300691 1_2:+49378814 Msa0074640:CDS
CTCATTAACACCAATGGCTT+TGG 0.300691 1_2:+49385604 Msa0074640:CDS
CTCATTAACACCAATGGCTT+TGG 0.300691 1_2:+49392392 Msa0074640:CDS
GGTTCTTCATCTTCTTTGTC+TGG 0.341589 1_2:-49378839 None:intergenic
GGTTCTTCATCTTCTTTGTC+TGG 0.341589 1_2:-49385629 None:intergenic
GGTTCTTCATCTTCTTTGTC+TGG 0.341589 1_2:-49392417 None:intergenic
AGTGGTGGTGGAGGTGGTGT+TGG 0.362843 1_2:-49378663 None:intergenic
AGTGGTGGTGGAGGTGGTGT+TGG 0.362843 1_2:-49385456 None:intergenic
AGTGGTGGTGGAGGTGGTGT+TGG 0.362843 1_2:-49392244 None:intergenic
ACAACAAATCCAACGTTTAT+GGG 0.395741 1_2:+49378708 Msa0074640:CDS
ACAACAAATCCAACGTTTAT+GGG 0.395741 1_2:+49385498 Msa0074640:CDS
ACAACAAATCCAACGTTTAT+GGG 0.395741 1_2:+49392286 Msa0074640:CDS
GAGGTCGCCTCCACCGGTGC+AGG 0.405277 1_2:-49378794 None:intergenic
GAGGTCGCCTCCACCGGTGC+AGG 0.405277 1_2:-49385584 None:intergenic
GAGGTCGCCTCCACCGGTGC+AGG 0.405277 1_2:-49392372 None:intergenic
TGTGGTTCTAAATTCACATC+TGG 0.409768 1_2:+49378740 Msa0074640:CDS
TGTGGTTCTAAATTCACATC+TGG 0.409768 1_2:+49385530 Msa0074640:CDS
TGTGGTTCTAAATTCACATC+TGG 0.409768 1_2:+49392318 Msa0074640:CDS
GTTGGTAGTGGTGGTGGAGG+TGG 0.418761 1_2:-49378669 None:intergenic
GTTGGTAGTGGTGGTGGAGG+TGG 0.418761 1_2:-49385462 None:intergenic
GTTGGTAGTGGTGGTGGAGG+TGG 0.418761 1_2:-49392250 None:intergenic
TATCTTTGATCTTCTTAAGC+TGG 0.420628 1_2:-49392489 None:intergenic
GTTTATGGGTGCTCTATTTG+TGG 0.429587 1_2:+49378722 Msa0074640:CDS
GTTTATGGGTGCTCTATTTG+TGG 0.429587 1_2:+49385512 Msa0074640:CDS
GTTTATGGGTGCTCTATTTG+TGG 0.429587 1_2:+49392300 Msa0074640:CDS
GAATAAGCAATGATGGAGAA+AGG 0.431980 1_2:-49378476 None:intergenic
GAATAAGCAATGATGGAGAA+AGG 0.431980 1_2:-49385269 None:intergenic
GAATAAGCAATGATGGAGAA+AGG 0.431980 1_2:-49392057 None:intergenic
TTCACTTCATTTCAAGCACT+TGG 0.432350 1_2:+49392159 Msa0074640:CDS
GTTGTTGTTGGTAGTGGTGG+TGG 0.447547 1_2:-49378675 None:intergenic
GTTGTTGTTGGTAGTGGTGG+TGG 0.447547 1_2:-49385468 None:intergenic
GTTGTTGTTGGTAGTGGTGG+TGG 0.447547 1_2:-49392256 None:intergenic
GTTAATGAGGTCGCCTCCAC+CGG 0.455728 1_2:-49378800 None:intergenic
GTTAATGAGGTCGCCTCCAC+CGG 0.455728 1_2:-49385590 None:intergenic
GTTAATGAGGTCGCCTCCAC+CGG 0.455728 1_2:-49392378 None:intergenic
TTCACATCTGGCCAGGCACT+TGG 0.470440 1_2:+49378752 Msa0074640:CDS
TTCACATCTGGCCAGGCACT+TGG 0.470440 1_2:+49385542 Msa0074640:CDS
TTCACATCTGGCCAGGCACT+TGG 0.470440 1_2:+49392330 Msa0074640:CDS
TTGTCTGGTTCCAAAGCCAT+TGG 0.473795 1_2:-49378824 None:intergenic
TTGTCTGGTTCCAAAGCCAT+TGG 0.473795 1_2:-49385614 None:intergenic
TTGTCTGGTTCCAAAGCCAT+TGG 0.473795 1_2:-49392402 None:intergenic
CAAAGTGAATATAACTCAAA+AGG 0.474354 1_2:+49378427 Msa0074640:CDS
AGTAGAAGAATAAGCAATGA+TGG 0.477070 1_2:-49378483 None:intergenic
AGTAGAAGAATAAGCAATGA+TGG 0.477070 1_2:-49385276 None:intergenic
AGTAGAAGAATAAGCAATGA+TGG 0.477070 1_2:-49392064 None:intergenic
CCTAGAAAAGCTCATAGAAA+AGG 0.480382 1_2:+49392207 Msa0074640:CDS
GTTGTTGGTAGTGGTGGTGG+AGG 0.487921 1_2:-49378672 None:intergenic
GTTGTTGGTAGTGGTGGTGG+AGG 0.487921 1_2:-49385465 None:intergenic
GTTGTTGGTAGTGGTGGTGG+AGG 0.487921 1_2:-49392253 None:intergenic
GTGCAGGGTGGAAGTTCATA+TGG 0.495014 1_2:-49378778 None:intergenic
GTGCAGGGTGGAAGTTCATA+TGG 0.495014 1_2:-49385568 None:intergenic
GTGCAGGGTGGAAGTTCATA+TGG 0.495014 1_2:-49392356 None:intergenic
TCATATGGCCACCAAGTGCC+TGG 0.495422 1_2:-49378763 None:intergenic
TCATATGGCCACCAAGTGCC+TGG 0.495422 1_2:-49385553 None:intergenic
TCATATGGCCACCAAGTGCC+TGG 0.495422 1_2:-49392341 None:intergenic
CTTCCACCCTGCACCGGTGG+AGG 0.496858 1_2:+49378787 Msa0074640:CDS
CTTCCACCCTGCACCGGTGG+AGG 0.496858 1_2:+49385577 Msa0074640:CDS
CTTCCACCCTGCACCGGTGG+AGG 0.496858 1_2:+49392365 Msa0074640:CDS
AATAAGCAATGATGGAGAAA+GGG 0.498901 1_2:-49378475 None:intergenic
AATAAGCAATGATGGAGAAA+GGG 0.498901 1_2:-49385268 None:intergenic
AATAAGCAATGATGGAGAAA+GGG 0.498901 1_2:-49392056 None:intergenic
GTTGTTGTTGTTGGTAGTGG+TGG 0.519273 1_2:-49378678 None:intergenic
GTTGTTGTTGTTGGTAGTGG+TGG 0.519273 1_2:-49385471 None:intergenic
GTTGTTGTTGTTGGTAGTGG+TGG 0.519273 1_2:-49392259 None:intergenic
AGAAAGGGATAGGAGATTGT+GGG 0.519333 1_2:-49378460 None:intergenic
AGAAAGGGATAGGAGATTGT+GGG 0.519333 1_2:-49385253 None:intergenic
AGAAAGGGATAGGAGATTGT+GGG 0.519333 1_2:-49392041 None:intergenic
ACTTCATTTCAAGCACTTGG+AGG 0.520190 1_2:+49392162 Msa0074640:CDS
GCTTATTCTTCTACTAGAGA+AGG 0.521996 1_2:+49378491 Msa0074640:CDS
GCTTATTCTTCTACTAGAGA+AGG 0.521996 1_2:+49385284 Msa0074640:CDS
GCTTATTCTTCTACTAGAGA+AGG 0.521996 1_2:+49392072 Msa0074640:CDS
GCAATGATGGAGAAAGGGAT+AGG 0.524368 1_2:-49378470 None:intergenic
GCAATGATGGAGAAAGGGAT+AGG 0.524368 1_2:-49385263 None:intergenic
GCAATGATGGAGAAAGGGAT+AGG 0.524368 1_2:-49392051 None:intergenic
ACATCTGGCCAGGCACTTGG+TGG 0.529943 1_2:+49378755 Msa0074640:CDS
ACATCTGGCCAGGCACTTGG+TGG 0.529943 1_2:+49385545 Msa0074640:CDS
ACATCTGGCCAGGCACTTGG+TGG 0.529943 1_2:+49392333 Msa0074640:CDS
CAAAGCCATTGGTGTTAATG+AGG 0.530269 1_2:-49378813 None:intergenic
CAAAGCCATTGGTGTTAATG+AGG 0.530269 1_2:-49385603 None:intergenic
CAAAGCCATTGGTGTTAATG+AGG 0.530269 1_2:-49392391 None:intergenic
TTCTAAATTCACATCTGGCC+AGG 0.531142 1_2:+49378745 Msa0074640:CDS
TTCTAAATTCACATCTGGCC+AGG 0.531142 1_2:+49385535 Msa0074640:CDS
TTCTAAATTCACATCTGGCC+AGG 0.531142 1_2:+49392323 Msa0074640:CDS
GAGAAAGGGATAGGAGATTG+TGG 0.535781 1_2:-49378461 None:intergenic
GAGAAAGGGATAGGAGATTG+TGG 0.535781 1_2:-49385254 None:intergenic
GAGAAAGGGATAGGAGATTG+TGG 0.535781 1_2:-49392042 None:intergenic
AAAGGGATAGGAGATTGTGG+GGG 0.541180 1_2:-49378458 None:intergenic
AAAGGGATAGGAGATTGTGG+GGG 0.541180 1_2:-49385251 None:intergenic
AAAGGGATAGGAGATTGTGG+GGG 0.541180 1_2:-49392039 None:intergenic
AGGTCGCCTCCACCGGTGCA+GGG 0.559156 1_2:-49378793 None:intergenic
AGGTCGCCTCCACCGGTGCA+GGG 0.559156 1_2:-49385583 None:intergenic
AGGTCGCCTCCACCGGTGCA+GGG 0.559156 1_2:-49392371 None:intergenic
GAAAGGGATAGGAGATTGTG+GGG 0.561722 1_2:-49378459 None:intergenic
GAAAGGGATAGGAGATTGTG+GGG 0.561722 1_2:-49385252 None:intergenic
GAAAGGGATAGGAGATTGTG+GGG 0.561722 1_2:-49392040 None:intergenic
GATCTTCTTAAGCTGGAGGA+AGG 0.566486 1_2:-49392482 None:intergenic
GAACTTCCACCCTGCACCGG+TGG 0.571423 1_2:+49378784 Msa0074640:CDS
GAACTTCCACCCTGCACCGG+TGG 0.571423 1_2:+49385574 Msa0074640:CDS
GAACTTCCACCCTGCACCGG+TGG 0.571423 1_2:+49392362 Msa0074640:CDS
TATGAACTTCCACCCTGCAC+CGG 0.571843 1_2:+49378781 Msa0074640:CDS
TATGAACTTCCACCCTGCAC+CGG 0.571843 1_2:+49385571 Msa0074640:CDS
TATGAACTTCCACCCTGCAC+CGG 0.571843 1_2:+49392359 Msa0074640:CDS
CTTTGATCTTCTTAAGCTGG+AGG 0.575809 1_2:-49392486 None:intergenic
GGCGACCTCATTAACACCAA+TGG 0.589385 1_2:+49378808 Msa0074640:CDS
GGCGACCTCATTAACACCAA+TGG 0.589385 1_2:+49385598 Msa0074640:CDS
GGCGACCTCATTAACACCAA+TGG 0.589385 1_2:+49392386 Msa0074640:CDS
AAGGGATAGGAGATTGTGGG+GGG 0.595859 1_2:-49378457 None:intergenic
AAGGGATAGGAGATTGTGGG+GGG 0.595859 1_2:-49385250 None:intergenic
AAGGGATAGGAGATTGTGGG+GGG 0.595859 1_2:-49392038 None:intergenic
TATTCTTCTACTAGAGAAGG+AGG 0.628197 1_2:+49378494 Msa0074640:CDS
TATTCTTCTACTAGAGAAGG+AGG 0.628197 1_2:+49385287 Msa0074640:CDS
TATTCTTCTACTAGAGAAGG+AGG 0.628197 1_2:+49392075 Msa0074640:CDS
AATAGAGCACCCATAAACGT+TGG 0.630895 1_2:-49378717 None:intergenic
AATAGAGCACCCATAAACGT+TGG 0.630895 1_2:-49385507 None:intergenic
AATAGAGCACCCATAAACGT+TGG 0.630895 1_2:-49392295 None:intergenic
TCGCCTCCACCGGTGCAGGG+TGG 0.663528 1_2:-49378790 None:intergenic
TCGCCTCCACCGGTGCAGGG+TGG 0.663528 1_2:-49385580 None:intergenic
TCGCCTCCACCGGTGCAGGG+TGG 0.663528 1_2:-49392368 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACTTAAACAAATATATTT+TGG - chr1_2:49379416-49379435 None:intergenic 10.0%
!! TTTATTCATTAAAATATTTG+TGG + chr1_2:49381948-49381967 Msa0074640:intron 10.0%
!! TGATATAAAAATAAATTGTA+AGG - chr1_2:49384559-49384578 None:intergenic 10.0%
!! GAAAATTTAATATGATTATT+AGG - chr1_2:49384594-49384613 None:intergenic 10.0%
!!! AAACTTAAACAAATATATTT+TGG - chr1_2:49379416-49379435 None:intergenic 10.0%
!! TTTATTCATTAAAATATTTG+TGG + chr1_2:49381948-49381967 Msa0074640:intron 10.0%
!! TGATATAAAAATAAATTGTA+AGG - chr1_2:49384559-49384578 None:intergenic 10.0%
!! GAAAATTTAATATGATTATT+AGG - chr1_2:49384594-49384613 None:intergenic 10.0%
!!! AAATATATTTAAGTTGACAA+AGG - chr1_2:49379107-49379126 None:intergenic 15.0%
!! TTGAATTCATAAAAATTATC+TGG - chr1_2:49379211-49379230 None:intergenic 15.0%
!!! TAAGAATTTTTAATTGAGAA+AGG + chr1_2:49379252-49379271 Msa0074640:intron 15.0%
!! TTGATATTAAAAAATGATGA+TGG + chr1_2:49379441-49379460 Msa0074640:intron 15.0%
!!! AAAAGGTTTTGATTAATTTT+AGG - chr1_2:49380681-49380700 None:intergenic 15.0%
!! ACAATAACATAAAAAGATAA+TGG - chr1_2:49381561-49381580 None:intergenic 15.0%
!!! TATCTTTTTATGTTATTGTT+AGG + chr1_2:49381562-49381581 Msa0074640:intron 15.0%
!!! TTTTTTTAAGCACATTATAT+CGG + chr1_2:49382003-49382022 Msa0074640:intron 15.0%
!!! TTTTCAAGTAGAATAAATTT+TGG + chr1_2:49382225-49382244 Msa0074640:intron 15.0%
!! ATGTAGTTTATTTAATTGAA+TGG - chr1_2:49384253-49384272 None:intergenic 15.0%
!!! AAATATATTTAAGTTGACAA+AGG - chr1_2:49379107-49379126 None:intergenic 15.0%
!! TTGAATTCATAAAAATTATC+TGG - chr1_2:49379211-49379230 None:intergenic 15.0%
!!! TAAGAATTTTTAATTGAGAA+AGG + chr1_2:49379252-49379271 Msa0074640:intron 15.0%
!! TTGATATTAAAAAATGATGA+TGG + chr1_2:49379441-49379460 Msa0074640:intron 15.0%
!!! AAAAGGTTTTGATTAATTTT+AGG - chr1_2:49380681-49380700 None:intergenic 15.0%
!! ACAATAACATAAAAAGATAA+TGG - chr1_2:49381561-49381580 None:intergenic 15.0%
!!! TATCTTTTTATGTTATTGTT+AGG + chr1_2:49381562-49381581 Msa0074640:intron 15.0%
!!! TTTTTTTAAGCACATTATAT+CGG + chr1_2:49382003-49382022 Msa0074640:intron 15.0%
!!! TTTTCAAGTAGAATAAATTT+TGG + chr1_2:49382225-49382244 Msa0074640:intron 15.0%
!! ATGTAGTTTATTTAATTGAA+TGG - chr1_2:49384253-49384272 None:intergenic 15.0%
!!! TTAGTTTTTTTTAGTGTCAT+TGG + chr1_2:49379295-49379314 Msa0074640:intron 20.0%
!!! GTTTTAAGATCCTAATTTTT+AGG + chr1_2:49381533-49381552 Msa0074640:intron 20.0%
!!! GTTTCTTTATGCATTATTTT+AGG + chr1_2:49381643-49381662 Msa0074640:intron 20.0%
!! TACATTTAGTGTAAGATATT+GGG - chr1_2:49381848-49381867 None:intergenic 20.0%
!! ATACATTTAGTGTAAGATAT+TGG - chr1_2:49381849-49381868 None:intergenic 20.0%
!! TACAAGTACAACAAAAAAAA+TGG + chr1_2:49381911-49381930 Msa0074640:intron 20.0%
!! ACAAGTACAACAAAAAAAAT+GGG + chr1_2:49381912-49381931 Msa0074640:intron 20.0%
!!! AAAATTGATTCTAACATGTT+TGG - chr1_2:49382279-49382298 None:intergenic 20.0%
!!! AAAGTGACCATAATTAATTT+TGG - chr1_2:49382308-49382327 None:intergenic 20.0%
!!! ATTGTTGCTATTTATATTAC+AGG + chr1_2:49382482-49382501 Msa0074640:intron 20.0%
!!! TTGTTGCTATTTATATTACA+GGG + chr1_2:49382483-49382502 Msa0074640:intron 20.0%
!!! GTTTATTTAAACTTTGAAGT+TGG - chr1_2:49382786-49382805 None:intergenic 20.0%
!! ACTTCAAAGTTTAAATAAAC+TGG + chr1_2:49382786-49382805 Msa0074640:intron 20.0%
!!! TATTTTCACTAATTTCTATG+AGG - chr1_2:49383084-49383103 None:intergenic 20.0%
!! AAATTATTGTTGAAAAATGC+AGG - chr1_2:49383287-49383306 None:intergenic 20.0%
!!! TGCATTTTTCAACAATAATT+TGG + chr1_2:49383286-49383305 Msa0074640:intron 20.0%
!! CTAAAAATTATAATACCACA+AGG + chr1_2:49383590-49383609 Msa0074640:intron 20.0%
!! TAAAAAGTTGTGAAAGATAT+GGG - chr1_2:49383625-49383644 None:intergenic 20.0%
!! ATAAAAAGTTGTGAAAGATA+TGG - chr1_2:49383626-49383645 None:intergenic 20.0%
!! TCCAACATTAAAAATTTAAC+AGG + chr1_2:49384205-49384224 Msa0074640:intron 20.0%
!!! ACCTGTTAAATTTTTAATGT+TGG - chr1_2:49384209-49384228 None:intergenic 20.0%
!! TAGTTTATTTAATTGAATGG+TGG - chr1_2:49384250-49384269 None:intergenic 20.0%
!! AATTAAATAAACTACATCCT+AGG + chr1_2:49384256-49384275 Msa0074640:intron 20.0%
!! ATTAAATAAACTACATCCTA+GGG + chr1_2:49384257-49384276 Msa0074640:intron 20.0%
!!! ATTCCATATAACTTTTAAGA+TGG - chr1_2:49385043-49385062 None:intergenic 20.0%
!!! TTAGTTTTTTTTAGTGTCAT+TGG + chr1_2:49379295-49379314 Msa0074640:intron 20.0%
!!! GTTTTAAGATCCTAATTTTT+AGG + chr1_2:49381533-49381552 Msa0074640:intron 20.0%
!!! GTTTCTTTATGCATTATTTT+AGG + chr1_2:49381643-49381662 Msa0074640:intron 20.0%
!! TACATTTAGTGTAAGATATT+GGG - chr1_2:49381848-49381867 None:intergenic 20.0%
!! ATACATTTAGTGTAAGATAT+TGG - chr1_2:49381849-49381868 None:intergenic 20.0%
!! TACAAGTACAACAAAAAAAA+TGG + chr1_2:49381911-49381930 Msa0074640:intron 20.0%
!! ACAAGTACAACAAAAAAAAT+GGG + chr1_2:49381912-49381931 Msa0074640:intron 20.0%
!!! AAAATTGATTCTAACATGTT+TGG - chr1_2:49382279-49382298 None:intergenic 20.0%
!!! AAAGTGACCATAATTAATTT+TGG - chr1_2:49382308-49382327 None:intergenic 20.0%
!!! ATTGTTGCTATTTATATTAC+AGG + chr1_2:49382482-49382501 Msa0074640:intron 20.0%
!!! TTGTTGCTATTTATATTACA+GGG + chr1_2:49382483-49382502 Msa0074640:intron 20.0%
!!! GTTTATTTAAACTTTGAAGT+TGG - chr1_2:49382786-49382805 None:intergenic 20.0%
!! ACTTCAAAGTTTAAATAAAC+TGG + chr1_2:49382786-49382805 Msa0074640:intron 20.0%
!!! TATTTTCACTAATTTCTATG+AGG - chr1_2:49383084-49383103 None:intergenic 20.0%
!! AAATTATTGTTGAAAAATGC+AGG - chr1_2:49383287-49383306 None:intergenic 20.0%
!!! TGCATTTTTCAACAATAATT+TGG + chr1_2:49383286-49383305 Msa0074640:intron 20.0%
!! CTAAAAATTATAATACCACA+AGG + chr1_2:49383590-49383609 Msa0074640:intron 20.0%
!! TAAAAAGTTGTGAAAGATAT+GGG - chr1_2:49383625-49383644 None:intergenic 20.0%
!! ATAAAAAGTTGTGAAAGATA+TGG - chr1_2:49383626-49383645 None:intergenic 20.0%
!! TCCAACATTAAAAATTTAAC+AGG + chr1_2:49384205-49384224 Msa0074640:intron 20.0%
!!! ACCTGTTAAATTTTTAATGT+TGG - chr1_2:49384209-49384228 None:intergenic 20.0%
!! TAGTTTATTTAATTGAATGG+TGG - chr1_2:49384250-49384269 None:intergenic 20.0%
!! AATTAAATAAACTACATCCT+AGG + chr1_2:49384256-49384275 Msa0074640:intron 20.0%
!! ATTAAATAAACTACATCCTA+GGG + chr1_2:49384257-49384276 Msa0074640:intron 20.0%
!!! ATTCCATATAACTTTTAAGA+TGG - chr1_2:49385043-49385062 None:intergenic 20.0%
!!! CTTTTGAGTTATATTCACTT+TGG - chr1_2:49378429-49378448 None:intergenic 25.0%
! CAAAGTGAATATAACTCAAA+AGG + chr1_2:49378427-49378446 Msa0074640:CDS 25.0%
!! TTTTCAATTCATCAAACAGA+TGG + chr1_2:49379547-49379566 Msa0074640:intron 25.0%
! ATGGTGAAAACTATCATATA+TGG + chr1_2:49379612-49379631 Msa0074640:intron 25.0%
! TGGTGAAAACTATCATATAT+GGG + chr1_2:49379613-49379632 Msa0074640:intron 25.0%
! AGATAAAAAATCACAAGGAA+AGG + chr1_2:49379735-49379754 Msa0074640:intron 25.0%
!!! TATTTCAAATGCTGATTTGA+TGG - chr1_2:49379834-49379853 None:intergenic 25.0%
!! TCAAATCAGCATTTGAAATA+TGG + chr1_2:49379834-49379853 Msa0074640:intron 25.0%
! TATCATTCTTCTTTGTTCTT+GGG - chr1_2:49380161-49380180 None:intergenic 25.0%
! TTATCATTCTTCTTTGTTCT+TGG - chr1_2:49380162-49380181 None:intergenic 25.0%
! AAGAACAAAGAAGAATGATA+AGG + chr1_2:49380161-49380180 Msa0074640:intron 25.0%
! GCTAAATTAAAGAACTACAA+TGG + chr1_2:49380214-49380233 Msa0074640:intron 25.0%
! AAATTAAAGAACTACAATGG+TGG + chr1_2:49380217-49380236 Msa0074640:intron 25.0%
!!! TGGTTATTTTTTTTGCAGTA+TGG - chr1_2:49380295-49380314 None:intergenic 25.0%
!! AAATTAGTTTCAAACCTGAA+AGG - chr1_2:49380641-49380660 None:intergenic 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr1_2:49381048-49381067 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr1_2:49381047-49381066 Msa0074640:intron 25.0%
! AAAACTGCTAATAACGTTAT+TGG - chr1_2:49381078-49381097 None:intergenic 25.0%
! AAAGAAGAGATCTTTAAACT+TGG + chr1_2:49381133-49381152 Msa0074640:intron 25.0%
! AGCAACAAAGTAATTGTTAA+CGG + chr1_2:49381251-49381270 Msa0074640:intron 25.0%
! AATTTCTTGAGTCAAATAGT+TGG + chr1_2:49381282-49381301 Msa0074640:intron 25.0%
!!! GATAATGGATCCTAAAAATT+AGG - chr1_2:49381546-49381565 None:intergenic 25.0%
!!! TCTATTTGTTACCAGTTTTT+AGG + chr1_2:49381600-49381619 Msa0074640:intron 25.0%
! AAAACTAAATGCCTAAAAAC+TGG - chr1_2:49381614-49381633 None:intergenic 25.0%
! TTTAACTATAAGTATGTGTG+TGG + chr1_2:49382168-49382187 Msa0074640:intron 25.0%
! TACACCTCCAAAATTAATTA+TGG + chr1_2:49382298-49382317 Msa0074640:intron 25.0%
!!! TGTTGCTATTTATATTACAG+GGG + chr1_2:49382484-49382503 Msa0074640:intron 25.0%
! ATTAAAACTTATGATGTGTG+TGG - chr1_2:49382699-49382718 None:intergenic 25.0%
! AATTGAGAATTTCATGCTTT+AGG + chr1_2:49382820-49382839 Msa0074640:intron 25.0%
! ATTGAGAATTTCATGCTTTA+GGG + chr1_2:49382821-49382840 Msa0074640:intron 25.0%
!!! TATATAGTTTGCTTTGAATC+CGG + chr1_2:49382865-49382884 Msa0074640:intron 25.0%
! AAGAAAATCACTAAATCACA+CGG - chr1_2:49383119-49383138 None:intergenic 25.0%
!! ATTTTCTTCCTAGAAATTGT+TGG + chr1_2:49383131-49383150 Msa0074640:intron 25.0%
!! TTTTCTTCCTAGAAATTGTT+GGG + chr1_2:49383132-49383151 Msa0074640:intron 25.0%
!!! TAAAATTTATTTTCCCATGG+TGG - chr1_2:49383373-49383392 None:intergenic 25.0%
!! GAGTAGCACATATTTTATTA+TGG + chr1_2:49383407-49383426 Msa0074640:intron 25.0%
!! TATAATAGCTTGTAGTTTCA+TGG - chr1_2:49383488-49383507 None:intergenic 25.0%
! ATGAATTATTACTGTCTCAA+AGG + chr1_2:49383644-49383663 Msa0074640:intron 25.0%
! TAGCACATGAAGAAAAAATA+TGG + chr1_2:49383705-49383724 Msa0074640:intron 25.0%
! GAAGAGATTAAAATCATTGT+TGG + chr1_2:49383961-49383980 Msa0074640:intron 25.0%
! TTACTGGTATCATTTACAAA+GGG - chr1_2:49384172-49384191 None:intergenic 25.0%
! TTTACTGGTATCATTTACAA+AGG - chr1_2:49384173-49384192 None:intergenic 25.0%
! TTTCCTTTGCAAAATGAATA+TGG - chr1_2:49384284-49384303 None:intergenic 25.0%
!! TATAAGTTGGAGTTAAGTAA+AGG - chr1_2:49384496-49384515 None:intergenic 25.0%
! AGAAAACAATCTCTATAAGT+TGG - chr1_2:49384509-49384528 None:intergenic 25.0%
! GTAACTTTCTAACAATGTAT+CGG + chr1_2:49384769-49384788 Msa0074640:intron 25.0%
! TAACTTTCTAACAATGTATC+GGG + chr1_2:49384770-49384789 Msa0074640:intron 25.0%
! CAACCATCTTAAAAGTTATA+TGG + chr1_2:49385037-49385056 Msa0074640:intron 25.0%
!!! CTTTTGAGTTATATTCACTT+TGG - chr1_2:49378429-49378448 None:intergenic 25.0%
! CAAAGTGAATATAACTCAAA+AGG + chr1_2:49378427-49378446 Msa0074640:CDS 25.0%
!! TTTTCAATTCATCAAACAGA+TGG + chr1_2:49379547-49379566 Msa0074640:intron 25.0%
! ATGGTGAAAACTATCATATA+TGG + chr1_2:49379612-49379631 Msa0074640:intron 25.0%
! TGGTGAAAACTATCATATAT+GGG + chr1_2:49379613-49379632 Msa0074640:intron 25.0%
! AGATAAAAAATCACAAGGAA+AGG + chr1_2:49379735-49379754 Msa0074640:intron 25.0%
!!! TATTTCAAATGCTGATTTGA+TGG - chr1_2:49379834-49379853 None:intergenic 25.0%
!! TCAAATCAGCATTTGAAATA+TGG + chr1_2:49379834-49379853 Msa0074640:intron 25.0%
! TATCATTCTTCTTTGTTCTT+GGG - chr1_2:49380161-49380180 None:intergenic 25.0%
! TTATCATTCTTCTTTGTTCT+TGG - chr1_2:49380162-49380181 None:intergenic 25.0%
! AAGAACAAAGAAGAATGATA+AGG + chr1_2:49380161-49380180 Msa0074640:intron 25.0%
! GCTAAATTAAAGAACTACAA+TGG + chr1_2:49380214-49380233 Msa0074640:intron 25.0%
! AAATTAAAGAACTACAATGG+TGG + chr1_2:49380217-49380236 Msa0074640:intron 25.0%
!!! TGGTTATTTTTTTTGCAGTA+TGG - chr1_2:49380295-49380314 None:intergenic 25.0%
!! AAATTAGTTTCAAACCTGAA+AGG - chr1_2:49380641-49380660 None:intergenic 25.0%
! TTTATTCATTTGTTCCCATA+TGG - chr1_2:49381048-49381067 None:intergenic 25.0%
! ATATGGGAACAAATGAATAA+AGG + chr1_2:49381047-49381066 Msa0074640:intron 25.0%
! AAAACTGCTAATAACGTTAT+TGG - chr1_2:49381078-49381097 None:intergenic 25.0%
! AAAGAAGAGATCTTTAAACT+TGG + chr1_2:49381133-49381152 Msa0074640:intron 25.0%
! AATTTCTTGAGTCAAATAGT+TGG + chr1_2:49381282-49381301 Msa0074640:intron 25.0%
!!! GATAATGGATCCTAAAAATT+AGG - chr1_2:49381546-49381565 None:intergenic 25.0%
!!! TCTATTTGTTACCAGTTTTT+AGG + chr1_2:49381600-49381619 Msa0074640:intron 25.0%
! AAAACTAAATGCCTAAAAAC+TGG - chr1_2:49381614-49381633 None:intergenic 25.0%
! TTTAACTATAAGTATGTGTG+TGG + chr1_2:49382168-49382187 Msa0074640:intron 25.0%
! TACACCTCCAAAATTAATTA+TGG + chr1_2:49382298-49382317 Msa0074640:intron 25.0%
!!! TGTTGCTATTTATATTACAG+GGG + chr1_2:49382484-49382503 Msa0074640:intron 25.0%
! ATTAAAACTTATGATGTGTG+TGG - chr1_2:49382699-49382718 None:intergenic 25.0%
! AATTGAGAATTTCATGCTTT+AGG + chr1_2:49382820-49382839 Msa0074640:intron 25.0%
! ATTGAGAATTTCATGCTTTA+GGG + chr1_2:49382821-49382840 Msa0074640:intron 25.0%
!!! TATATAGTTTGCTTTGAATC+CGG + chr1_2:49382865-49382884 Msa0074640:intron 25.0%
! AAGAAAATCACTAAATCACA+CGG - chr1_2:49383119-49383138 None:intergenic 25.0%
!! ATTTTCTTCCTAGAAATTGT+TGG + chr1_2:49383131-49383150 Msa0074640:intron 25.0%
!! TTTTCTTCCTAGAAATTGTT+GGG + chr1_2:49383132-49383151 Msa0074640:intron 25.0%
!!! TAAAATTTATTTTCCCATGG+TGG - chr1_2:49383373-49383392 None:intergenic 25.0%
!! GAGTAGCACATATTTTATTA+TGG + chr1_2:49383407-49383426 Msa0074640:intron 25.0%
!! TATAATAGCTTGTAGTTTCA+TGG - chr1_2:49383488-49383507 None:intergenic 25.0%
! ATGAATTATTACTGTCTCAA+AGG + chr1_2:49383644-49383663 Msa0074640:intron 25.0%
! TAGCACATGAAGAAAAAATA+TGG + chr1_2:49383705-49383724 Msa0074640:intron 25.0%
! GAAGAGATTAAAATCATTGT+TGG + chr1_2:49383961-49383980 Msa0074640:intron 25.0%
! TTACTGGTATCATTTACAAA+GGG - chr1_2:49384172-49384191 None:intergenic 25.0%
! TTTACTGGTATCATTTACAA+AGG - chr1_2:49384173-49384192 None:intergenic 25.0%
! TTTCCTTTGCAAAATGAATA+TGG - chr1_2:49384284-49384303 None:intergenic 25.0%
! TATATGTTGGAGTAAAGTAA+AGG - chr1_2:49391284-49391303 None:intergenic 25.0%
! AGAAAACAATCTCTATATGT+TGG - chr1_2:49391297-49391316 None:intergenic 25.0%
! GTAACTTTCTAACAATGTAT+CGG + chr1_2:49384769-49384788 Msa0074640:intron 25.0%
! TAACTTTCTAACAATGTATC+GGG + chr1_2:49384770-49384789 Msa0074640:intron 25.0%
! CAACCATCTTAAAAGTTATA+TGG + chr1_2:49385037-49385056 Msa0074640:intron 25.0%
!!! CTTTTGAGTTATATTCACTT+TGG - chr1_2:49378429-49378448 None:intergenic 25.0%
! CAAAGTGAATATAACTCAAA+AGG + chr1_2:49378427-49378446 Msa0074640:CDS 25.0%
! ATTCACTTTGGTGACATTAA+TGG - chr1_2:49378417-49378436 None:intergenic 30.0%
! AATAAGCAATGATGGAGAAA+GGG - chr1_2:49378478-49378497 None:intergenic 30.0%
AGTAGAAGAATAAGCAATGA+TGG - chr1_2:49378486-49378505 None:intergenic 30.0%
AACAACAAATCCAACGTTTA+TGG + chr1_2:49378707-49378726 Msa0074640:CDS 30.0%
ACAACAAATCCAACGTTTAT+GGG + chr1_2:49378708-49378727 Msa0074640:CDS 30.0%
AGAAAAAACGAATGTCTCTT+TGG + chr1_2:49378868-49378887 Msa0074640:intron 30.0%
TATCTTTGATCTTCTTAAGC+TGG - chr1_2:49378914-49378933 None:intergenic 30.0%
!!! AAGTGACAAGGTTTTAGTTT+GGG + chr1_2:49379017-49379036 Msa0074640:intron 30.0%
!!! TGTTGTTGCTATTTTTTCTG+TGG + chr1_2:49379323-49379342 Msa0074640:intron 30.0%
GTGATGAAATATTATGACTG+CGG + chr1_2:49379354-49379373 Msa0074640:intron 30.0%
!!! TTTTTTATCTGAGCCATTGT+TGG - chr1_2:49379725-49379744 None:intergenic 30.0%
AAACAAGAAAGTCAAAAGCA+AGG + chr1_2:49379759-49379778 Msa0074640:intron 30.0%
AACAAGAAAGTCAAAAGCAA+GGG + chr1_2:49379760-49379779 Msa0074640:intron 30.0%
! TGATTTGATGGTCATAATTC+TGG - chr1_2:49379822-49379841 None:intergenic 30.0%
TTCCTCAAAACTGAATATGA+AGG + chr1_2:49379860-49379879 Msa0074640:intron 30.0%
ATGAAGGAGATGAAAGAATT+AGG + chr1_2:49379876-49379895 Msa0074640:intron 30.0%
TGAAGGAGATGAAAGAATTA+GGG + chr1_2:49379877-49379896 Msa0074640:intron 30.0%
! TCTTTTGCATCTCAAATTCT+CGG - chr1_2:49379925-49379944 None:intergenic 30.0%
! ATTTGAGATGCAAAAGATGA+AGG + chr1_2:49379928-49379947 Msa0074640:intron 30.0%
ATAGTTGCTTCAAATCTTTC+CGG - chr1_2:49380070-49380089 None:intergenic 30.0%
!!! TTTTTTTTGCAGTATGGACA+TGG - chr1_2:49380289-49380308 None:intergenic 30.0%
ACTATTTCCAAAGTCAGAAT+TGG + chr1_2:49380564-49380583 Msa0074640:intron 30.0%
AGATGCAAACAACATAGAAA+TGG + chr1_2:49380767-49380786 Msa0074640:intron 30.0%
ATGGTCAATGTTCAAATGAA+AGG + chr1_2:49380786-49380805 Msa0074640:intron 30.0%
TTCCTCATTTATCAAATCCA+AGG - chr1_2:49380823-49380842 None:intergenic 30.0%
!! CTTTCTTCTTGATTTGTTCA+AGG - chr1_2:49381166-49381185 None:intergenic 30.0%
CTATAGCCTACAAAAATTTC+AGG - chr1_2:49381194-49381213 None:intergenic 30.0%
!! ACAATTACTTTGTTGCTTTG+TGG - chr1_2:49381248-49381267 None:intergenic 30.0%
TTGAGTCAAATAGTTGGAAT+TGG + chr1_2:49381288-49381307 Msa0074640:intron 30.0%
TGAGTCAAATAGTTGGAATT+GGG + chr1_2:49381289-49381308 Msa0074640:intron 30.0%
TTGTGAGAAGTTTGAATTTC+AGG + chr1_2:49381316-49381335 Msa0074640:intron 30.0%
GTTATGTGAACAACATGAAA+GGG - chr1_2:49381715-49381734 None:intergenic 30.0%
TGTTATGTGAACAACATGAA+AGG - chr1_2:49381716-49381735 None:intergenic 30.0%
! ACTACTTGTTGGATATAGAA+AGG - chr1_2:49381758-49381777 None:intergenic 30.0%
! CTGTCTTTAGAGAGAAATTA+GGG - chr1_2:49381812-49381831 None:intergenic 30.0%
! ACTGTCTTTAGAGAGAAATT+AGG - chr1_2:49381813-49381832 None:intergenic 30.0%
! GTGACCATAATTAATTTTGG+AGG - chr1_2:49382305-49382324 None:intergenic 30.0%
TTATATTACAGGGGCAATTA+AGG + chr1_2:49382493-49382512 Msa0074640:intron 30.0%
GTTGGAAATGTCTATTAGAA+GGG - chr1_2:49382768-49382787 None:intergenic 30.0%
AGTTGGAAATGTCTATTAGA+AGG - chr1_2:49382769-49382788 None:intergenic 30.0%
! TGGTTTGTGGATGAATTTAT+TGG + chr1_2:49382981-49383000 Msa0074640:intron 30.0%
!! GATTCTACATAGCTTTTTCT+GGG - chr1_2:49383046-49383065 None:intergenic 30.0%
!! AGATTCTACATAGCTTTTTC+TGG - chr1_2:49383047-49383066 None:intergenic 30.0%
TTCACTAATTTCTATGAGGA+TGG - chr1_2:49383080-49383099 None:intergenic 30.0%
ACTGTGTTGAATTAAAGTTG+CGG + chr1_2:49383155-49383174 Msa0074640:intron 30.0%
!! GGCTAAAATTTATTTTCCCA+TGG - chr1_2:49383376-49383395 None:intergenic 30.0%
! TGTGCTACTCTTTAATCTAA+TGG - chr1_2:49383397-49383416 None:intergenic 30.0%
! TTTTTCTTGTTCTTTTCGAC+TGG - chr1_2:49383678-49383697 None:intergenic 30.0%
AGAATTGGGAAAGTTTCAAT+TGG + chr1_2:49383846-49383865 Msa0074640:intron 30.0%
GAGATTAAAATCATTGTTGG+TGG + chr1_2:49383964-49383983 Msa0074640:intron 30.0%
! ATTAAAATCATTGTTGGTGG+TGG + chr1_2:49383967-49383986 Msa0074640:intron 30.0%
! GAGGAGCATATACTTTATTA+TGG - chr1_2:49384080-49384099 None:intergenic 30.0%
TATGCTCCTCTTTAATCTAA+TGG + chr1_2:49384090-49384109 Msa0074640:intron 30.0%
GGAAAATACTGTAGATTTAC+TGG - chr1_2:49384188-49384207 None:intergenic 30.0%
AAAAAAAAGATGCTCTCTCA+CGG + chr1_2:49384306-49384325 Msa0074640:intron 30.0%
GTAACTTTCTAACATTGTGT+CGG + chr1_2:49384886-49384905 Msa0074640:intron 30.0%
TAACTTTCTAACATTGTGTC+GGG + chr1_2:49384887-49384906 Msa0074640:intron 30.0%
! ATTCACTTTGGTGACATTAA+TGG - chr1_2:49378417-49378436 None:intergenic 30.0%
! AATAAGCAATGATGGAGAAA+GGG - chr1_2:49378478-49378497 None:intergenic 30.0%
AGTAGAAGAATAAGCAATGA+TGG - chr1_2:49378486-49378505 None:intergenic 30.0%
AACAACAAATCCAACGTTTA+TGG + chr1_2:49378707-49378726 Msa0074640:CDS 30.0%
ACAACAAATCCAACGTTTAT+GGG + chr1_2:49378708-49378727 Msa0074640:CDS 30.0%
AGAAAAAACGAATGTCTCTT+TGG + chr1_2:49378868-49378887 Msa0074640:intron 30.0%
TATCTTTGATCTTCTTAAGC+TGG - chr1_2:49378914-49378933 None:intergenic 30.0%
!!! AAGTGACAAGGTTTTAGTTT+GGG + chr1_2:49379017-49379036 Msa0074640:intron 30.0%
!!! TGTTGTTGCTATTTTTTCTG+TGG + chr1_2:49379323-49379342 Msa0074640:intron 30.0%
GTGATGAAATATTATGACTG+CGG + chr1_2:49379354-49379373 Msa0074640:intron 30.0%
!!! TTTTTTATCTGAGCCATTGT+TGG - chr1_2:49379725-49379744 None:intergenic 30.0%
AAACAAGAAAGTCAAAAGCA+AGG + chr1_2:49379759-49379778 Msa0074640:intron 30.0%
AACAAGAAAGTCAAAAGCAA+GGG + chr1_2:49379760-49379779 Msa0074640:intron 30.0%
! TGATTTGATGGTCATAATTC+TGG - chr1_2:49379822-49379841 None:intergenic 30.0%
TTCCTCAAAACTGAATATGA+AGG + chr1_2:49379860-49379879 Msa0074640:intron 30.0%
ATGAAGGAGATGAAAGAATT+AGG + chr1_2:49379876-49379895 Msa0074640:intron 30.0%
TGAAGGAGATGAAAGAATTA+GGG + chr1_2:49379877-49379896 Msa0074640:intron 30.0%
! TCTTTTGCATCTCAAATTCT+CGG - chr1_2:49379925-49379944 None:intergenic 30.0%
! ATTTGAGATGCAAAAGATGA+AGG + chr1_2:49379928-49379947 Msa0074640:intron 30.0%
ATAGTTGCTTCAAATCTTTC+CGG - chr1_2:49380070-49380089 None:intergenic 30.0%
!!! TTTTTTTTGCAGTATGGACA+TGG - chr1_2:49380289-49380308 None:intergenic 30.0%
ACTATTTCCAAAGTCAGAAT+TGG + chr1_2:49380564-49380583 Msa0074640:intron 30.0%
AGATGCAAACAACATAGAAA+TGG + chr1_2:49380767-49380786 Msa0074640:intron 30.0%
ATGGTCAATGTTCAAATGAA+AGG + chr1_2:49380786-49380805 Msa0074640:intron 30.0%
TTCCTCATTTATCAAATCCA+AGG - chr1_2:49380823-49380842 None:intergenic 30.0%
!! CTTTCTTCTTGATTTGTTCA+AGG - chr1_2:49381166-49381185 None:intergenic 30.0%
CTATAGCCTACAAAAATTTC+AGG - chr1_2:49381194-49381213 None:intergenic 30.0%
!! ACAATTACTTTGTTGCTTTG+TGG - chr1_2:49381248-49381267 None:intergenic 30.0%
TTGAGTCAAATAGTTGGAAT+TGG + chr1_2:49381288-49381307 Msa0074640:intron 30.0%
TGAGTCAAATAGTTGGAATT+GGG + chr1_2:49381289-49381308 Msa0074640:intron 30.0%
TTGTGAGAAGTTTGAATTTC+AGG + chr1_2:49381316-49381335 Msa0074640:intron 30.0%
GTTATGTGAACAACATGAAA+GGG - chr1_2:49381715-49381734 None:intergenic 30.0%
TGTTATGTGAACAACATGAA+AGG - chr1_2:49381716-49381735 None:intergenic 30.0%
! ACTACTTGTTGGATATAGAA+AGG - chr1_2:49381758-49381777 None:intergenic 30.0%
! CTGTCTTTAGAGAGAAATTA+GGG - chr1_2:49381812-49381831 None:intergenic 30.0%
! ACTGTCTTTAGAGAGAAATT+AGG - chr1_2:49381813-49381832 None:intergenic 30.0%
! GTGACCATAATTAATTTTGG+AGG - chr1_2:49382305-49382324 None:intergenic 30.0%
TTATATTACAGGGGCAATTA+AGG + chr1_2:49382493-49382512 Msa0074640:intron 30.0%
GTTGGAAATGTCTATTAGAA+GGG - chr1_2:49382768-49382787 None:intergenic 30.0%
AGTTGGAAATGTCTATTAGA+AGG - chr1_2:49382769-49382788 None:intergenic 30.0%
! TGGTTTGTGGATGAATTTAT+TGG + chr1_2:49382981-49383000 Msa0074640:intron 30.0%
!! GATTCTACATAGCTTTTTCT+GGG - chr1_2:49383046-49383065 None:intergenic 30.0%
!! AGATTCTACATAGCTTTTTC+TGG - chr1_2:49383047-49383066 None:intergenic 30.0%
TTCACTAATTTCTATGAGGA+TGG - chr1_2:49383080-49383099 None:intergenic 30.0%
ACTGTGTTGAATTAAAGTTG+CGG + chr1_2:49383155-49383174 Msa0074640:intron 30.0%
!! GGCTAAAATTTATTTTCCCA+TGG - chr1_2:49383376-49383395 None:intergenic 30.0%
! TGTGCTACTCTTTAATCTAA+TGG - chr1_2:49383397-49383416 None:intergenic 30.0%
! TTTTTCTTGTTCTTTTCGAC+TGG - chr1_2:49383678-49383697 None:intergenic 30.0%
AGAATTGGGAAAGTTTCAAT+TGG + chr1_2:49383846-49383865 Msa0074640:intron 30.0%
GAGATTAAAATCATTGTTGG+TGG + chr1_2:49383964-49383983 Msa0074640:intron 30.0%
! ATTAAAATCATTGTTGGTGG+TGG + chr1_2:49383967-49383986 Msa0074640:intron 30.0%
! GAGGAGCATATACTTTATTA+TGG - chr1_2:49384080-49384099 None:intergenic 30.0%
TATGCTCCTCTTTAATCTAA+TGG + chr1_2:49384090-49384109 Msa0074640:intron 30.0%
GGAAAATACTGTAGATTTAC+TGG - chr1_2:49384188-49384207 None:intergenic 30.0%
AAAAAAAAGATGCTCTCTCA+CGG + chr1_2:49384306-49384325 Msa0074640:intron 30.0%
GTAACTTTCTAACATTGTGT+CGG + chr1_2:49384886-49384905 Msa0074640:intron 30.0%
TAACTTTCTAACATTGTGTC+GGG + chr1_2:49384887-49384906 Msa0074640:intron 30.0%
! ATTCACTTTGGTGACATTAA+TGG - chr1_2:49378417-49378436 None:intergenic 30.0%
! AATAAGCAATGATGGAGAAA+GGG - chr1_2:49378478-49378497 None:intergenic 30.0%
AGTAGAAGAATAAGCAATGA+TGG - chr1_2:49378486-49378505 None:intergenic 30.0%
AACAACAAATCCAACGTTTA+TGG + chr1_2:49378707-49378726 Msa0074640:CDS 30.0%
ACAACAAATCCAACGTTTAT+GGG + chr1_2:49378708-49378727 Msa0074640:CDS 30.0%
AGAAAAAACGAATGTCTCTT+TGG + chr1_2:49378868-49378887 Msa0074640:intron 30.0%
! GAATAAGCAATGATGGAGAA+AGG - chr1_2:49378479-49378498 None:intergenic 35.0%
GCTTATTCTTCTACTAGAGA+AGG + chr1_2:49378491-49378510 Msa0074640:CDS 35.0%
TATTCTTCTACTAGAGAAGG+AGG + chr1_2:49378494-49378513 Msa0074640:CDS 35.0%
TTCACTTCATTTCAAGCACT+TGG + chr1_2:49378578-49378597 Msa0074640:intron 35.0%
! GCTTCTTGTGAACTTTTCTA+TGG - chr1_2:49378607-49378626 None:intergenic 35.0%
! CCTTTTCTATGAGCTTTTCT+AGG - chr1_2:49378629-49378648 None:intergenic 35.0%
CCTAGAAAAGCTCATAGAAA+AGG + chr1_2:49378626-49378645 Msa0074640:intron 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG - chr1_2:49378690-49378709 None:intergenic 35.0%
!! TGTGGTTCTAAATTCACATC+TGG + chr1_2:49378740-49378759 Msa0074640:CDS 35.0%
AACGAATGTCTCTTTGGATT+TGG + chr1_2:49378874-49378893 Msa0074640:intron 35.0%
!! AAGACTTGTTTGTTGTTGCT+TGG - chr1_2:49378957-49378976 None:intergenic 35.0%
ATCATTACTGACAAGTGACA+AGG + chr1_2:49379005-49379024 Msa0074640:intron 35.0%
!!! CAAGTGACAAGGTTTTAGTT+TGG + chr1_2:49379016-49379035 Msa0074640:intron 35.0%
AACTGAATGTAAACCCAGTT+TGG - chr1_2:49379048-49379067 None:intergenic 35.0%
! ATCAAACACAGGTAATGGTA+GGG - chr1_2:49379594-49379613 None:intergenic 35.0%
! TAGTTTTCACCATCAAACAC+AGG - chr1_2:49379605-49379624 None:intergenic 35.0%
ATTGTTGGATTGTCTGACAA+AGG - chr1_2:49379710-49379729 None:intergenic 35.0%
TTTGTCAGACAATCCAACAA+TGG + chr1_2:49379709-49379728 Msa0074640:intron 35.0%
GGCTCAGATAAAAAATCACA+AGG + chr1_2:49379730-49379749 Msa0074640:intron 35.0%
! CTCCTTCATATTCAGTTTTG+AGG - chr1_2:49379865-49379884 None:intergenic 35.0%
GAAGGAGATGAAAGAATTAG+GGG + chr1_2:49379878-49379897 Msa0074640:intron 35.0%
AAGGAGATGAAAGAATTAGG+GGG + chr1_2:49379879-49379898 Msa0074640:intron 35.0%
GCTAACAAAGTAAGATTGCT+TGG + chr1_2:49379995-49380014 Msa0074640:intron 35.0%
TAGTTGCTTCAAATCTTTCC+GGG - chr1_2:49380069-49380088 None:intergenic 35.0%
AGAAGAATGATAAGGTCTGA+AGG + chr1_2:49380169-49380188 Msa0074640:intron 35.0%
! TAAAGAACTACAATGGTGGA+AGG + chr1_2:49380221-49380240 Msa0074640:intron 35.0%
ACATGTGGAAAGAATATGCA+AGG + chr1_2:49380375-49380394 Msa0074640:intron 35.0%
CTAAGGTTGTTGAAGAACTT+TGG + chr1_2:49380416-49380435 Msa0074640:intron 35.0%
! GAGAGTTGGCTTATATATAG+TGG + chr1_2:49380486-49380505 Msa0074640:intron 35.0%
TCCAAAGTCAGAATTGGAAA+TGG + chr1_2:49380570-49380589 Msa0074640:intron 35.0%
ACTTATCGAAGTAAAAGGCA+AGG + chr1_2:49380596-49380615 Msa0074640:intron 35.0%
CTTATCGAAGTAAAAGGCAA+GGG + chr1_2:49380597-49380616 Msa0074640:intron 35.0%
ACTGCTAGAGAATGGTTATA+AGG + chr1_2:49380713-49380732 Msa0074640:intron 35.0%
!! TGGTTATAAGGTGTTGTTTG+AGG + chr1_2:49380725-49380744 Msa0074640:intron 35.0%
TGCCTTGGATTTGATAAATG+AGG + chr1_2:49380818-49380837 Msa0074640:intron 35.0%
! GTTTCCATTGATTGTATCGA+CGG - chr1_2:49380940-49380959 None:intergenic 35.0%
! ACTTCAGTAACATCCTGTTT+TGG - chr1_2:49381008-49381027 None:intergenic 35.0%
! GTAGTTTTTGCAGTAGAGTT+AGG - chr1_2:49381110-49381129 None:intergenic 35.0%
! GCAGAACCTGAAATTTTTGT+AGG + chr1_2:49381185-49381204 Msa0074640:intron 35.0%
TGAGAAGTTTGAATTTCAGG+AGG + chr1_2:49381319-49381338 Msa0074640:intron 35.0%
!! GTTGATGATGAAACTGTTAG+AGG + chr1_2:49381353-49381372 Msa0074640:intron 35.0%
CTAACTTTGTCATATCCTTC+TGG - chr1_2:49381431-49381450 None:intergenic 35.0%
GAATTCTTGACACAAATGCT+TGG + chr1_2:49381455-49381474 Msa0074640:intron 35.0%
GGATATAGAAAGGTTTAACG+TGG - chr1_2:49381748-49381767 None:intergenic 35.0%
CATGTTTACTCACTACTTGT+TGG - chr1_2:49381769-49381788 None:intergenic 35.0%
CAACAAGTAGTGAGTAAACA+TGG + chr1_2:49381767-49381786 Msa0074640:intron 35.0%
! TCGGTAAAATGTAGCTTGTA+TGG + chr1_2:49382022-49382041 Msa0074640:intron 35.0%
CCAATGATTACGTGTATGTA+TGG - chr1_2:49382341-49382360 None:intergenic 35.0%
CCATACATACACGTAATCAT+TGG + chr1_2:49382338-49382357 Msa0074640:intron 35.0%
TTACCGTGTTTGACCTTAAT+AGG + chr1_2:49382367-49382386 Msa0074640:intron 35.0%
AGACCTATTAAGGTCAAACA+CGG - chr1_2:49382373-49382392 None:intergenic 35.0%
TGACCTTAATAGGTCTCTTA+CGG + chr1_2:49382377-49382396 Msa0074640:intron 35.0%
TTACCGTAAGAGACCTATTA+AGG - chr1_2:49382383-49382402 None:intergenic 35.0%
AGCATACACTGTTTCAATTG+GGG - chr1_2:49382575-49382594 None:intergenic 35.0%
CAGCATACACTGTTTCAATT+GGG - chr1_2:49382576-49382595 None:intergenic 35.0%
ACAGCATACACTGTTTCAAT+TGG - chr1_2:49382577-49382596 None:intergenic 35.0%
! TTTGCTTTGAATCCGGATAT+GGG + chr1_2:49382872-49382891 Msa0074640:intron 35.0%
!! GAAGATGAGTATTGAGTTTG+TGG + chr1_2:49382907-49382926 Msa0074640:intron 35.0%
! TTTGTGGCAGATTTCTTTTC+TGG + chr1_2:49382923-49382942 Msa0074640:intron 35.0%
! GCAGATTTCTTTTCTGGATT+TGG + chr1_2:49382929-49382948 Msa0074640:intron 35.0%
TGGATTTGGAGATTCATTCT+GGG + chr1_2:49382943-49382962 Msa0074640:intron 35.0%
!! TCAGATGGATATTTGGTTTG+TGG + chr1_2:49382968-49382987 Msa0074640:intron 35.0%
CTTTGTAAAGGTGGCATTTA+GGG + chr1_2:49383327-49383346 Msa0074640:intron 35.0%
TGCAGAATCTGGCAAAATAA+GGG - chr1_2:49383526-49383545 None:intergenic 35.0%
TTGCAGAATCTGGCAAAATA+AGG - chr1_2:49383527-49383546 None:intergenic 35.0%
! AAATGGTGTTTTGCAGAATC+TGG - chr1_2:49383537-49383556 None:intergenic 35.0%
ATTCTGCAAAACACCATTTG+TGG + chr1_2:49383538-49383557 Msa0074640:intron 35.0%
TTTGATACTCCAACCACAAA+TGG - chr1_2:49383554-49383573 None:intergenic 35.0%
TATGGGTAACAATTACCTTG+TGG - chr1_2:49383608-49383627 None:intergenic 35.0%
TTGTGAGTATGAGCAGAATT+GGG + chr1_2:49383832-49383851 Msa0074640:intron 35.0%
TGATGAGGAAAACGAAGTTA+CGG + chr1_2:49383904-49383923 Msa0074640:intron 35.0%
TTTGTTTGACTGATGTCTGA+TGG + chr1_2:49384019-49384038 Msa0074640:intron 35.0%
TGTTGGCCATTAGATTAAAG+AGG - chr1_2:49384099-49384118 None:intergenic 35.0%
! AACATCTATTTTCCCATGGT+GGG + chr1_2:49384115-49384134 Msa0074640:intron 35.0%
TTTACAAAGGGTGGCATTTA+GGG - chr1_2:49384160-49384179 None:intergenic 35.0%
ATTTACAAAGGGTGGCATTT+AGG - chr1_2:49384161-49384180 None:intergenic 35.0%
! ATGGTGGTGATTTACATCAT+AGG - chr1_2:49384234-49384253 None:intergenic 35.0%
! GGTCCATATTCATTTTGCAA+AGG + chr1_2:49384278-49384297 Msa0074640:intron 35.0%
GGAAAAGCCGATAATCATTA+CGG - chr1_2:49384368-49384387 None:intergenic 35.0%
!!! ATGATTATCGGCTTTTCCTT+TGG + chr1_2:49384370-49384389 Msa0074640:intron 35.0%
!! GCTTTTCCTTTGGTTTCTTT+TGG + chr1_2:49384380-49384399 Msa0074640:intron 35.0%
AGTAGTCCAAAAGAAACCAA+AGG - chr1_2:49384389-49384408 None:intergenic 35.0%
TTGGAGTTAAGTAAAGGCAA+AGG - chr1_2:49384490-49384509 None:intergenic 35.0%
!! TTTTTCATGATGAGAGTACG+TGG - chr1_2:49384857-49384876 None:intergenic 35.0%
! ATTTGGGTTTGGATTAAGAG+AGG - chr1_2:49385134-49385153 None:intergenic 35.0%
AATCCAAACCCAAATCAACA+TGG + chr1_2:49385139-49385158 Msa0074640:intron 35.0%
!! AGATGCTTCCATGTTGATTT+GGG - chr1_2:49385150-49385169 None:intergenic 35.0%
! GAATAAGCAATGATGGAGAA+AGG - chr1_2:49378479-49378498 None:intergenic 35.0%
GCTTATTCTTCTACTAGAGA+AGG + chr1_2:49378491-49378510 Msa0074640:CDS 35.0%
TATTCTTCTACTAGAGAAGG+AGG + chr1_2:49378494-49378513 Msa0074640:CDS 35.0%
TTCACTTCATTTCAAGCACT+TGG + chr1_2:49378578-49378597 Msa0074640:intron 35.0%
! GCTTCTTGTGAACTTTTCTA+TGG - chr1_2:49378607-49378626 None:intergenic 35.0%
! CCTTTTCTATGAGCTTTTCT+AGG - chr1_2:49378629-49378648 None:intergenic 35.0%
CCTAGAAAAGCTCATAGAAA+AGG + chr1_2:49378626-49378645 Msa0074640:intron 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG - chr1_2:49378690-49378709 None:intergenic 35.0%
!! TGTGGTTCTAAATTCACATC+TGG + chr1_2:49378740-49378759 Msa0074640:CDS 35.0%
AACGAATGTCTCTTTGGATT+TGG + chr1_2:49378874-49378893 Msa0074640:intron 35.0%
!! AAGACTTGTTTGTTGTTGCT+TGG - chr1_2:49378957-49378976 None:intergenic 35.0%
ATCATTACTGACAAGTGACA+AGG + chr1_2:49379005-49379024 Msa0074640:intron 35.0%
!!! CAAGTGACAAGGTTTTAGTT+TGG + chr1_2:49379016-49379035 Msa0074640:intron 35.0%
AACTGAATGTAAACCCAGTT+TGG - chr1_2:49379048-49379067 None:intergenic 35.0%
! ATCAAACACAGGTAATGGTA+GGG - chr1_2:49379594-49379613 None:intergenic 35.0%
! TAGTTTTCACCATCAAACAC+AGG - chr1_2:49379605-49379624 None:intergenic 35.0%
ATTGTTGGATTGTCTGACAA+AGG - chr1_2:49379710-49379729 None:intergenic 35.0%
TTTGTCAGACAATCCAACAA+TGG + chr1_2:49379709-49379728 Msa0074640:intron 35.0%
GGCTCAGATAAAAAATCACA+AGG + chr1_2:49379730-49379749 Msa0074640:intron 35.0%
! CTCCTTCATATTCAGTTTTG+AGG - chr1_2:49379865-49379884 None:intergenic 35.0%
GAAGGAGATGAAAGAATTAG+GGG + chr1_2:49379878-49379897 Msa0074640:intron 35.0%
AAGGAGATGAAAGAATTAGG+GGG + chr1_2:49379879-49379898 Msa0074640:intron 35.0%
GCTAACAAAGTAAGATTGCT+TGG + chr1_2:49379995-49380014 Msa0074640:intron 35.0%
TAGTTGCTTCAAATCTTTCC+GGG - chr1_2:49380069-49380088 None:intergenic 35.0%
AGAAGAATGATAAGGTCTGA+AGG + chr1_2:49380169-49380188 Msa0074640:intron 35.0%
! TAAAGAACTACAATGGTGGA+AGG + chr1_2:49380221-49380240 Msa0074640:intron 35.0%
ACATGTGGAAAGAATATGCA+AGG + chr1_2:49380375-49380394 Msa0074640:intron 35.0%
CTAAGGTTGTTGAAGAACTT+TGG + chr1_2:49380416-49380435 Msa0074640:intron 35.0%
! GAGAGTTGGCTTATATATAG+TGG + chr1_2:49380486-49380505 Msa0074640:intron 35.0%
TCCAAAGTCAGAATTGGAAA+TGG + chr1_2:49380570-49380589 Msa0074640:intron 35.0%
ACTTATCGAAGTAAAAGGCA+AGG + chr1_2:49380596-49380615 Msa0074640:intron 35.0%
CTTATCGAAGTAAAAGGCAA+GGG + chr1_2:49380597-49380616 Msa0074640:intron 35.0%
ACTGCTAGAGAATGGTTATA+AGG + chr1_2:49380713-49380732 Msa0074640:intron 35.0%
!! TGGTTATAAGGTGTTGTTTG+AGG + chr1_2:49380725-49380744 Msa0074640:intron 35.0%
TGCCTTGGATTTGATAAATG+AGG + chr1_2:49380818-49380837 Msa0074640:intron 35.0%
! GTTTCCATTGATTGTATCGA+CGG - chr1_2:49380940-49380959 None:intergenic 35.0%
! ACTTCAGTAACATCCTGTTT+TGG - chr1_2:49381008-49381027 None:intergenic 35.0%
! GTAGTTTTTGCAGTAGAGTT+AGG - chr1_2:49381110-49381129 None:intergenic 35.0%
! GCAGAACCTGAAATTTTTGT+AGG + chr1_2:49381185-49381204 Msa0074640:intron 35.0%
TGAGAAGTTTGAATTTCAGG+AGG + chr1_2:49381319-49381338 Msa0074640:intron 35.0%
!! GTTGATGATGAAACTGTTAG+AGG + chr1_2:49381353-49381372 Msa0074640:intron 35.0%
CTAACTTTGTCATATCCTTC+TGG - chr1_2:49381431-49381450 None:intergenic 35.0%
GAATTCTTGACACAAATGCT+TGG + chr1_2:49381455-49381474 Msa0074640:intron 35.0%
GGATATAGAAAGGTTTAACG+TGG - chr1_2:49381748-49381767 None:intergenic 35.0%
CATGTTTACTCACTACTTGT+TGG - chr1_2:49381769-49381788 None:intergenic 35.0%
CAACAAGTAGTGAGTAAACA+TGG + chr1_2:49381767-49381786 Msa0074640:intron 35.0%
! TCGGTAAAATGTAGCTTGTA+TGG + chr1_2:49382022-49382041 Msa0074640:intron 35.0%
CCAATGATTACGTGTATGTA+TGG - chr1_2:49382341-49382360 None:intergenic 35.0%
CCATACATACACGTAATCAT+TGG + chr1_2:49382338-49382357 Msa0074640:intron 35.0%
TTAAGGTCAAACACGGTAAA+CGG - chr1_2:49382366-49382385 None:intergenic 35.0%
TTACCGTGTTTGACCTTAAT+AGG + chr1_2:49382367-49382386 Msa0074640:intron 35.0%
AGACCTATTAAGGTCAAACA+CGG - chr1_2:49382373-49382392 None:intergenic 35.0%
TGACCTTAATAGGTCTCTTA+CGG + chr1_2:49382377-49382396 Msa0074640:intron 35.0%
TTACCGTAAGAGACCTATTA+AGG - chr1_2:49382383-49382402 None:intergenic 35.0%
AGCATACACTGTTTCAATTG+GGG - chr1_2:49382575-49382594 None:intergenic 35.0%
CAGCATACACTGTTTCAATT+GGG - chr1_2:49382576-49382595 None:intergenic 35.0%
ACAGCATACACTGTTTCAAT+TGG - chr1_2:49382577-49382596 None:intergenic 35.0%
! TTTGCTTTGAATCCGGATAT+GGG + chr1_2:49382872-49382891 Msa0074640:intron 35.0%
!! GAAGATGAGTATTGAGTTTG+TGG + chr1_2:49382907-49382926 Msa0074640:intron 35.0%
! TTTGTGGCAGATTTCTTTTC+TGG + chr1_2:49382923-49382942 Msa0074640:intron 35.0%
! GCAGATTTCTTTTCTGGATT+TGG + chr1_2:49382929-49382948 Msa0074640:intron 35.0%
TGGATTTGGAGATTCATTCT+GGG + chr1_2:49382943-49382962 Msa0074640:intron 35.0%
!! TCAGATGGATATTTGGTTTG+TGG + chr1_2:49382968-49382987 Msa0074640:intron 35.0%
CTTTGTAAAGGTGGCATTTA+GGG + chr1_2:49383327-49383346 Msa0074640:intron 35.0%
TGCAGAATCTGGCAAAATAA+GGG - chr1_2:49383526-49383545 None:intergenic 35.0%
TTGCAGAATCTGGCAAAATA+AGG - chr1_2:49383527-49383546 None:intergenic 35.0%
! AAATGGTGTTTTGCAGAATC+TGG - chr1_2:49383537-49383556 None:intergenic 35.0%
ATTCTGCAAAACACCATTTG+TGG + chr1_2:49383538-49383557 Msa0074640:intron 35.0%
TTTGATACTCCAACCACAAA+TGG - chr1_2:49383554-49383573 None:intergenic 35.0%
TATGGGTAACAATTACCTTG+TGG - chr1_2:49383608-49383627 None:intergenic 35.0%
TTGTGAGTATGAGCAGAATT+GGG + chr1_2:49383832-49383851 Msa0074640:intron 35.0%
TGATGAGGAAAACGAAGTTA+CGG + chr1_2:49383904-49383923 Msa0074640:intron 35.0%
TTTGTTTGACTGATGTCTGA+TGG + chr1_2:49384019-49384038 Msa0074640:intron 35.0%
TGTTGGCCATTAGATTAAAG+AGG - chr1_2:49384099-49384118 None:intergenic 35.0%
! AACATCTATTTTCCCATGGT+GGG + chr1_2:49384115-49384134 Msa0074640:intron 35.0%
TTTACAAAGGGTGGCATTTA+GGG - chr1_2:49384160-49384179 None:intergenic 35.0%
ATTTACAAAGGGTGGCATTT+AGG - chr1_2:49384161-49384180 None:intergenic 35.0%
! ATGGTGGTGATTTACATCAT+AGG - chr1_2:49384234-49384253 None:intergenic 35.0%
! GGTCCATATTCATTTTGCAA+AGG + chr1_2:49384278-49384297 Msa0074640:intron 35.0%
GGAAAAGCCGATAATCATTA+CGG - chr1_2:49384368-49384387 None:intergenic 35.0%
!!! ATGATTATCGGCTTTTCCTT+TGG + chr1_2:49384370-49384389 Msa0074640:intron 35.0%
!! GCTTTTCCTTTGGTTTCTTT+TGG + chr1_2:49384380-49384399 Msa0074640:intron 35.0%
AGTAGTCCAAAAGAAACCAA+AGG - chr1_2:49384389-49384408 None:intergenic 35.0%
TTGGAGTAAAGTAAAGGCAA+AGG - chr1_2:49391278-49391297 None:intergenic 35.0%
!! TTTTTCATGATGAGAGTACG+TGG - chr1_2:49384857-49384876 None:intergenic 35.0%
! ATTTGGGTTTGGATTAAGAG+AGG - chr1_2:49385134-49385153 None:intergenic 35.0%
AATCCAAACCCAAATCAACA+TGG + chr1_2:49385139-49385158 Msa0074640:intron 35.0%
!! AGATGCTTCCATGTTGATTT+GGG - chr1_2:49385150-49385169 None:intergenic 35.0%
! GAATAAGCAATGATGGAGAA+AGG - chr1_2:49378479-49378498 None:intergenic 35.0%
GCTTATTCTTCTACTAGAGA+AGG + chr1_2:49378491-49378510 Msa0074640:CDS 35.0%
TATTCTTCTACTAGAGAAGG+AGG + chr1_2:49378494-49378513 Msa0074640:CDS 35.0%
TTCACTTCATTTCAAGCACT+TGG + chr1_2:49378578-49378597 Msa0074640:intron 35.0%
! GCTTCTTGTGAACTTTTCTA+TGG - chr1_2:49378607-49378626 None:intergenic 35.0%
! CCTTTTCTATGAGCTTTTCT+AGG - chr1_2:49378629-49378648 None:intergenic 35.0%
CCTAGAAAAGCTCATAGAAA+AGG + chr1_2:49378626-49378645 Msa0074640:intron 35.0%
! GTTGTTGTTGTTGTTGTTGT+TGG - chr1_2:49378690-49378709 None:intergenic 35.0%
!! TGTGGTTCTAAATTCACATC+TGG + chr1_2:49378740-49378759 Msa0074640:CDS 35.0%
AACGAATGTCTCTTTGGATT+TGG + chr1_2:49378874-49378893 Msa0074640:intron 35.0%
AGAAAGGGATAGGAGATTGT+GGG - chr1_2:49378463-49378482 None:intergenic 40.0%
ACTTCATTTCAAGCACTTGG+AGG + chr1_2:49378581-49378600 Msa0074640:intron 40.0%
! GTTGTTGTTGTTGTTGGTAG+TGG - chr1_2:49378684-49378703 None:intergenic 40.0%
! AATAGAGCACCCATAAACGT+TGG - chr1_2:49378720-49378739 None:intergenic 40.0%
GTTTATGGGTGCTCTATTTG+TGG + chr1_2:49378722-49378741 Msa0074640:CDS 40.0%
TTCTAAATTCACATCTGGCC+AGG + chr1_2:49378745-49378764 Msa0074640:CDS 40.0%
!! CAAAGCCATTGGTGTTAATG+AGG - chr1_2:49378816-49378835 None:intergenic 40.0%
CTCATTAACACCAATGGCTT+TGG + chr1_2:49378814-49378833 Msa0074640:CDS 40.0%
GGTTCTTCATCTTCTTTGTC+TGG - chr1_2:49378842-49378861 None:intergenic 40.0%
!!! ACATTCGTTTTTTCTGCAGG+TGG - chr1_2:49378863-49378882 None:intergenic 40.0%
!!! GAGACATTCGTTTTTTCTGC+AGG - chr1_2:49378866-49378885 None:intergenic 40.0%
CTTTGATCTTCTTAAGCTGG+AGG - chr1_2:49378911-49378930 None:intergenic 40.0%
! TTGTTGTTGCTTGGATGACA+AGG - chr1_2:49378948-49378967 None:intergenic 40.0%
!!! TTGTTTTTTGTGCACCTGCT+GGG + chr1_2:49378975-49378994 Msa0074640:intron 40.0%
! TAGTTTGGGATTCACCAAAC+TGG + chr1_2:49379031-49379050 Msa0074640:intron 40.0%
! AGTTTGGGATTCACCAAACT+GGG + chr1_2:49379032-49379051 Msa0074640:intron 40.0%
! CATCAAACACAGGTAATGGT+AGG - chr1_2:49379595-49379614 None:intergenic 40.0%
CTACCATTACCTGTGTTTGA+TGG + chr1_2:49379593-49379612 Msa0074640:intron 40.0%
TCACCATCAAACACAGGTAA+TGG - chr1_2:49379599-49379618 None:intergenic 40.0%
ACTATCATATATGGGCAGCA+AGG + chr1_2:49379621-49379640 Msa0074640:intron 40.0%
ATTTAGAGGCAAATGACCTC+TGG + chr1_2:49379654-49379673 Msa0074640:intron 40.0%
TTTAGAGGCAAATGACCTCT+GGG + chr1_2:49379655-49379674 Msa0074640:intron 40.0%
TGAAGCAACTATCACTTCCT+TGG + chr1_2:49380078-49380097 Msa0074640:intron 40.0%
CACTTCCTTGGAAAATACCA+AGG + chr1_2:49380090-49380109 Msa0074640:intron 40.0%
! CATGTCCTTGGTATTTTCCA+AGG - chr1_2:49380098-49380117 None:intergenic 40.0%
! GGTAAGCTTTAACATGTCCT+TGG - chr1_2:49380110-49380129 None:intergenic 40.0%
! CACTTGTGACATTTTACGTC+TGG - chr1_2:49380343-49380362 None:intergenic 40.0%
GACGTAAAATGTCACAAGTG+TGG + chr1_2:49380343-49380362 Msa0074640:intron 40.0%
AATATGCAAGGCTCAACATC+AGG + chr1_2:49380387-49380406 Msa0074640:intron 40.0%
ATATGCAAGGCTCAACATCA+GGG + chr1_2:49380388-49380407 Msa0074640:intron 40.0%
AGGTTGTTGAAGAACTTTGG+AGG + chr1_2:49380419-49380438 Msa0074640:intron 40.0%
TCGTGAGCTCTTTAATGATC+TGG + chr1_2:49380533-49380552 Msa0074640:intron 40.0%
GCCATTTCCAATTCTGACTT+TGG - chr1_2:49380574-49380593 None:intergenic 40.0%
GTTGCAATTGAAAGCCTTTC+AGG + chr1_2:49380624-49380643 Msa0074640:intron 40.0%
GCAGTTGAGTAACACTCAAA+AGG - chr1_2:49380698-49380717 None:intergenic 40.0%
GTTACTCAACTGCTAGAGAA+TGG + chr1_2:49380705-49380724 Msa0074640:intron 40.0%
ACAACATGCTGCTGTAAACA+AGG + chr1_2:49380842-49380861 Msa0074640:intron 40.0%
AAACAAGGAAGGAAGGATTC+AGG + chr1_2:49380857-49380876 Msa0074640:intron 40.0%
AGTTCCGTCGATACAATCAA+TGG + chr1_2:49380933-49380952 Msa0074640:intron 40.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr1_2:49381001-49381020 None:intergenic 40.0%
!! AAGCACAAGTTGATGCCATA+TGG + chr1_2:49381030-49381049 Msa0074640:intron 40.0%
!! AGCACAAGTTGATGCCATAT+GGG + chr1_2:49381031-49381050 Msa0074640:intron 40.0%
CACTTTCAGACATCTACCAA+AGG + chr1_2:49381384-49381403 Msa0074640:intron 40.0%
TGTATGCAGTTTCAGAGTCA+AGG + chr1_2:49381478-49381497 Msa0074640:intron 40.0%
! TAGCTTGTATGGTTGTGCAT+CGG + chr1_2:49382033-49382052 Msa0074640:intron 40.0%
GCGGATCTAAGTTTCAAAGA+AGG - chr1_2:49382546-49382565 None:intergenic 40.0%
GCATACACTGTTTCAATTGG+GGG - chr1_2:49382574-49382593 None:intergenic 40.0%
GTGACCATTTCATTTCTTGC+TGG + chr1_2:49382602-49382621 Msa0074640:intron 40.0%
GTCTCCAGCAAGAAATGAAA+TGG - chr1_2:49382609-49382628 None:intergenic 40.0%
TTCATTTCTTGCTGGAGACT+TGG + chr1_2:49382610-49382629 Msa0074640:intron 40.0%
!!! TCAAACCGTGTTTTGAAGTC+CGG + chr1_2:49382636-49382655 Msa0074640:intron 40.0%
ACTTATGATGTGTGTGGACA+TGG - chr1_2:49382693-49382712 None:intergenic 40.0%
! GTTTGCTTTGAATCCGGATA+TGG + chr1_2:49382871-49382890 Msa0074640:intron 40.0%
! TTGCTTTGAATCCGGATATG+GGG + chr1_2:49382873-49382892 Msa0074640:intron 40.0%
CTGGATTTGGAGATTCATTC+TGG + chr1_2:49382942-49382961 Msa0074640:intron 40.0%
GATTCATTCTGGGTTTCAGA+TGG + chr1_2:49382953-49382972 Msa0074640:intron 40.0%
CTGGGTTTCAGATGGATATT+TGG + chr1_2:49382961-49382980 Msa0074640:intron 40.0%
ACACAGTCCCAACAATTTCT+AGG - chr1_2:49383142-49383161 None:intergenic 40.0%
GACTAAACCAGCCTTTGTAA+AGG + chr1_2:49383315-49383334 Msa0074640:intron 40.0%
TAAACCAGCCTTTGTAAAGG+TGG + chr1_2:49383318-49383337 Msa0074640:intron 40.0%
CCTAAATGCCACCTTTACAA+AGG - chr1_2:49383329-49383348 None:intergenic 40.0%
CCTTTGTAAAGGTGGCATTT+AGG + chr1_2:49383326-49383345 Msa0074640:intron 40.0%
! AGGGAAAGATTTTTCCACCA+TGG + chr1_2:49383356-49383375 Msa0074640:intron 40.0%
! GGGAAAGATTTTTCCACCAT+GGG + chr1_2:49383357-49383376 Msa0074640:intron 40.0%
GCAGAATCTGGCAAAATAAG+GGG - chr1_2:49383525-49383544 None:intergenic 40.0%
TGCAAAACACCATTTGTGGT+TGG + chr1_2:49383542-49383561 Msa0074640:intron 40.0%
GTTGTGAGTATGAGCAGAAT+TGG + chr1_2:49383831-49383850 Msa0074640:intron 40.0%
CTCATCATCGAGAACTGTTA+GGG - chr1_2:49383891-49383910 None:intergenic 40.0%
AGGAAAACGAAGTTACGGAA+AGG + chr1_2:49383909-49383928 Msa0074640:intron 40.0%
!! AAAATCATTGTTGGTGGTGG+TGG + chr1_2:49383970-49383989 Msa0074640:intron 40.0%
CACCATGGGAAAATAGATGT+TGG - chr1_2:49384116-49384135 None:intergenic 40.0%
! CAACATCTATTTTCCCATGG+TGG + chr1_2:49384114-49384133 Msa0074640:intron 40.0%
! AGGAAAGATTTTCCCACCAT+GGG - chr1_2:49384130-49384149 None:intergenic 40.0%
! AAGGAAAGATTTTCCCACCA+TGG - chr1_2:49384131-49384150 None:intergenic 40.0%
CTGGTATCATTTACAAAGGG+TGG - chr1_2:49384169-49384188 None:intergenic 40.0%
GCAAAATGAATATGGACCCT+AGG - chr1_2:49384276-49384295 None:intergenic 40.0%
AATCATTACGGCTTAGGCTA+TGG - chr1_2:49384356-49384375 None:intergenic 40.0%
GCCTAAGCCGTAATGATTAT+CGG + chr1_2:49384358-49384377 Msa0074640:intron 40.0%
! ACAAAAATTCGGCTTGCAAG+AGG - chr1_2:49384947-49384966 None:intergenic 40.0%
GCGTGGTGAACACAAAAATT+CGG - chr1_2:49384958-49384977 None:intergenic 40.0%
TTCACCACGCACTATAATCA+CGG + chr1_2:49384968-49384987 Msa0074640:intron 40.0%
! TTTTCCGTGATTATAGTGCG+TGG - chr1_2:49384975-49384994 None:intergenic 40.0%
!! CTTCCATGTTGATTTGGGTT+TGG - chr1_2:49385145-49385164 None:intergenic 40.0%
! GAGATGCTTCCATGTTGATT+TGG - chr1_2:49385151-49385170 None:intergenic 40.0%
AGAAAGGGATAGGAGATTGT+GGG - chr1_2:49378463-49378482 None:intergenic 40.0%
ACTTCATTTCAAGCACTTGG+AGG + chr1_2:49378581-49378600 Msa0074640:intron 40.0%
! GTTGTTGTTGTTGTTGGTAG+TGG - chr1_2:49378684-49378703 None:intergenic 40.0%
! AATAGAGCACCCATAAACGT+TGG - chr1_2:49378720-49378739 None:intergenic 40.0%
GTTTATGGGTGCTCTATTTG+TGG + chr1_2:49378722-49378741 Msa0074640:CDS 40.0%
TTCTAAATTCACATCTGGCC+AGG + chr1_2:49378745-49378764 Msa0074640:CDS 40.0%
!! CAAAGCCATTGGTGTTAATG+AGG - chr1_2:49378816-49378835 None:intergenic 40.0%
CTCATTAACACCAATGGCTT+TGG + chr1_2:49378814-49378833 Msa0074640:CDS 40.0%
GGTTCTTCATCTTCTTTGTC+TGG - chr1_2:49378842-49378861 None:intergenic 40.0%
!!! ACATTCGTTTTTTCTGCAGG+TGG - chr1_2:49378863-49378882 None:intergenic 40.0%
!!! GAGACATTCGTTTTTTCTGC+AGG - chr1_2:49378866-49378885 None:intergenic 40.0%
CTTTGATCTTCTTAAGCTGG+AGG - chr1_2:49378911-49378930 None:intergenic 40.0%
! TTGTTGTTGCTTGGATGACA+AGG - chr1_2:49378948-49378967 None:intergenic 40.0%
!!! TTGTTTTTTGTGCACCTGCT+GGG + chr1_2:49378975-49378994 Msa0074640:intron 40.0%
! TAGTTTGGGATTCACCAAAC+TGG + chr1_2:49379031-49379050 Msa0074640:intron 40.0%
! AGTTTGGGATTCACCAAACT+GGG + chr1_2:49379032-49379051 Msa0074640:intron 40.0%
! CATCAAACACAGGTAATGGT+AGG - chr1_2:49379595-49379614 None:intergenic 40.0%
CTACCATTACCTGTGTTTGA+TGG + chr1_2:49379593-49379612 Msa0074640:intron 40.0%
TCACCATCAAACACAGGTAA+TGG - chr1_2:49379599-49379618 None:intergenic 40.0%
ACTATCATATATGGGCAGCA+AGG + chr1_2:49379621-49379640 Msa0074640:intron 40.0%
ATTTAGAGGCAAATGACCTC+TGG + chr1_2:49379654-49379673 Msa0074640:intron 40.0%
TTTAGAGGCAAATGACCTCT+GGG + chr1_2:49379655-49379674 Msa0074640:intron 40.0%
TGAAGCAACTATCACTTCCT+TGG + chr1_2:49380078-49380097 Msa0074640:intron 40.0%
CACTTCCTTGGAAAATACCA+AGG + chr1_2:49380090-49380109 Msa0074640:intron 40.0%
! CATGTCCTTGGTATTTTCCA+AGG - chr1_2:49380098-49380117 None:intergenic 40.0%
! GGTAAGCTTTAACATGTCCT+TGG - chr1_2:49380110-49380129 None:intergenic 40.0%
! CACTTGTGACATTTTACGTC+TGG - chr1_2:49380343-49380362 None:intergenic 40.0%
GACGTAAAATGTCACAAGTG+TGG + chr1_2:49380343-49380362 Msa0074640:intron 40.0%
AATATGCAAGGCTCAACATC+AGG + chr1_2:49380387-49380406 Msa0074640:intron 40.0%
ATATGCAAGGCTCAACATCA+GGG + chr1_2:49380388-49380407 Msa0074640:intron 40.0%
AGGTTGTTGAAGAACTTTGG+AGG + chr1_2:49380419-49380438 Msa0074640:intron 40.0%
TCGTGAGCTCTTTAATGATC+TGG + chr1_2:49380533-49380552 Msa0074640:intron 40.0%
GCCATTTCCAATTCTGACTT+TGG - chr1_2:49380574-49380593 None:intergenic 40.0%
GTTGCAATTGAAAGCCTTTC+AGG + chr1_2:49380624-49380643 Msa0074640:intron 40.0%
GCAGTTGAGTAACACTCAAA+AGG - chr1_2:49380698-49380717 None:intergenic 40.0%
GTTACTCAACTGCTAGAGAA+TGG + chr1_2:49380705-49380724 Msa0074640:intron 40.0%
ACAACATGCTGCTGTAAACA+AGG + chr1_2:49380842-49380861 Msa0074640:intron 40.0%
AAACAAGGAAGGAAGGATTC+AGG + chr1_2:49380857-49380876 Msa0074640:intron 40.0%
AGTTCCGTCGATACAATCAA+TGG + chr1_2:49380933-49380952 Msa0074640:intron 40.0%
TCTATCAAAGAACCTGTTCC+AGG + chr1_2:49387761-49387780 Msa0074640:intron 40.0%
CTATCAAAGAACCTGTTCCA+GGG + chr1_2:49387762-49387781 Msa0074640:intron 40.0%
TATCAAAGAACCTGTTCCAG+GGG + chr1_2:49387763-49387782 Msa0074640:intron 40.0%
!!! TAACATCCTGTTTTGGTTCC+AGG - chr1_2:49381001-49381020 None:intergenic 40.0%
!! AAGCACAAGTTGATGCCATA+TGG + chr1_2:49381030-49381049 Msa0074640:intron 40.0%
!! AGCACAAGTTGATGCCATAT+GGG + chr1_2:49381031-49381050 Msa0074640:intron 40.0%
CACTTTCAGACATCTACCAA+AGG + chr1_2:49381384-49381403 Msa0074640:intron 40.0%
TGTATGCAGTTTCAGAGTCA+AGG + chr1_2:49381478-49381497 Msa0074640:intron 40.0%
! TAGCTTGTATGGTTGTGCAT+CGG + chr1_2:49382033-49382052 Msa0074640:intron 40.0%
GCGGATCTAAGTTTCAAAGA+AGG - chr1_2:49382546-49382565 None:intergenic 40.0%
GCATACACTGTTTCAATTGG+GGG - chr1_2:49382574-49382593 None:intergenic 40.0%
GTGACCATTTCATTTCTTGC+TGG + chr1_2:49382602-49382621 Msa0074640:intron 40.0%
GTCTCCAGCAAGAAATGAAA+TGG - chr1_2:49382609-49382628 None:intergenic 40.0%
TTCATTTCTTGCTGGAGACT+TGG + chr1_2:49382610-49382629 Msa0074640:intron 40.0%
!!! TCAAACCGTGTTTTGAAGTC+CGG + chr1_2:49382636-49382655 Msa0074640:intron 40.0%
ACTTATGATGTGTGTGGACA+TGG - chr1_2:49382693-49382712 None:intergenic 40.0%
! GTTTGCTTTGAATCCGGATA+TGG + chr1_2:49382871-49382890 Msa0074640:intron 40.0%
! TTGCTTTGAATCCGGATATG+GGG + chr1_2:49382873-49382892 Msa0074640:intron 40.0%
CTGGATTTGGAGATTCATTC+TGG + chr1_2:49382942-49382961 Msa0074640:intron 40.0%
GATTCATTCTGGGTTTCAGA+TGG + chr1_2:49382953-49382972 Msa0074640:intron 40.0%
CTGGGTTTCAGATGGATATT+TGG + chr1_2:49382961-49382980 Msa0074640:intron 40.0%
ACACAGTCCCAACAATTTCT+AGG - chr1_2:49383142-49383161 None:intergenic 40.0%
GACTAAACCAGCCTTTGTAA+AGG + chr1_2:49383315-49383334 Msa0074640:intron 40.0%
TAAACCAGCCTTTGTAAAGG+TGG + chr1_2:49383318-49383337 Msa0074640:intron 40.0%
CCTAAATGCCACCTTTACAA+AGG - chr1_2:49383329-49383348 None:intergenic 40.0%
CCTTTGTAAAGGTGGCATTT+AGG + chr1_2:49383326-49383345 Msa0074640:intron 40.0%
! AGGGAAAGATTTTTCCACCA+TGG + chr1_2:49383356-49383375 Msa0074640:intron 40.0%
! GGGAAAGATTTTTCCACCAT+GGG + chr1_2:49383357-49383376 Msa0074640:intron 40.0%
GCAGAATCTGGCAAAATAAG+GGG - chr1_2:49383525-49383544 None:intergenic 40.0%
TGCAAAACACCATTTGTGGT+TGG + chr1_2:49383542-49383561 Msa0074640:intron 40.0%
GTTGTGAGTATGAGCAGAAT+TGG + chr1_2:49383831-49383850 Msa0074640:intron 40.0%
CTCATCATCGAGAACTGTTA+GGG - chr1_2:49383891-49383910 None:intergenic 40.0%
AGGAAAACGAAGTTACGGAA+AGG + chr1_2:49383909-49383928 Msa0074640:intron 40.0%
!! AAAATCATTGTTGGTGGTGG+TGG + chr1_2:49383970-49383989 Msa0074640:intron 40.0%
CACCATGGGAAAATAGATGT+TGG - chr1_2:49384116-49384135 None:intergenic 40.0%
! CAACATCTATTTTCCCATGG+TGG + chr1_2:49384114-49384133 Msa0074640:intron 40.0%
! AGGAAAGATTTTCCCACCAT+GGG - chr1_2:49384130-49384149 None:intergenic 40.0%
! AAGGAAAGATTTTCCCACCA+TGG - chr1_2:49384131-49384150 None:intergenic 40.0%
CTGGTATCATTTACAAAGGG+TGG - chr1_2:49384169-49384188 None:intergenic 40.0%
GCAAAATGAATATGGACCCT+AGG - chr1_2:49384276-49384295 None:intergenic 40.0%
AATCATTACGGCTTAGGCTA+CGG - chr1_2:49384356-49384375 None:intergenic 40.0%
GCCTAAGCCGTAATGATTAT+CGG + chr1_2:49384358-49384377 Msa0074640:intron 40.0%
! ACAAAAATTCGGCTTGCAAG+AGG - chr1_2:49384947-49384966 None:intergenic 40.0%
GCGTGGTGAACACAAAAATT+CGG - chr1_2:49384958-49384977 None:intergenic 40.0%
TTCACCACGCACTATAATCA+CGG + chr1_2:49384968-49384987 Msa0074640:intron 40.0%
! TTTTCCGTGATTATAGTGCG+TGG - chr1_2:49384975-49384994 None:intergenic 40.0%
!! CTTCCATGTTGATTTGGGTT+TGG - chr1_2:49385145-49385164 None:intergenic 40.0%
! GAGATGCTTCCATGTTGATT+TGG - chr1_2:49385151-49385170 None:intergenic 40.0%
AGAAAGGGATAGGAGATTGT+GGG - chr1_2:49378463-49378482 None:intergenic 40.0%
ACTTCATTTCAAGCACTTGG+AGG + chr1_2:49378581-49378600 Msa0074640:intron 40.0%
! GTTGTTGTTGTTGTTGGTAG+TGG - chr1_2:49378684-49378703 None:intergenic 40.0%
! AATAGAGCACCCATAAACGT+TGG - chr1_2:49378720-49378739 None:intergenic 40.0%
GTTTATGGGTGCTCTATTTG+TGG + chr1_2:49378722-49378741 Msa0074640:CDS 40.0%
TTCTAAATTCACATCTGGCC+AGG + chr1_2:49378745-49378764 Msa0074640:CDS 40.0%
!! CAAAGCCATTGGTGTTAATG+AGG - chr1_2:49378816-49378835 None:intergenic 40.0%
CTCATTAACACCAATGGCTT+TGG + chr1_2:49378814-49378833 Msa0074640:CDS 40.0%
GGTTCTTCATCTTCTTTGTC+TGG - chr1_2:49378842-49378861 None:intergenic 40.0%
!!! ACATTCGTTTTTTCTGCAGG+TGG - chr1_2:49378863-49378882 None:intergenic 40.0%
!!! GAGACATTCGTTTTTTCTGC+AGG - chr1_2:49378866-49378885 None:intergenic 40.0%
AAAGGGATAGGAGATTGTGG+GGG - chr1_2:49378461-49378480 None:intergenic 45.0%
GAAAGGGATAGGAGATTGTG+GGG - chr1_2:49378462-49378481 None:intergenic 45.0%
GAGAAAGGGATAGGAGATTG+TGG - chr1_2:49378464-49378483 None:intergenic 45.0%
! GCAATGATGGAGAAAGGGAT+AGG - chr1_2:49378473-49378492 None:intergenic 45.0%
!! GTTGTTGTTGTTGGTAGTGG+TGG - chr1_2:49378681-49378700 None:intergenic 45.0%
! TTGTCTGGTTCCAAAGCCAT+TGG - chr1_2:49378827-49378846 None:intergenic 45.0%
GATCTTCTTAAGCTGGAGGA+AGG - chr1_2:49378907-49378926 None:intergenic 45.0%
CTTGGATGACAAGGCAAACT+TGG - chr1_2:49378939-49378958 None:intergenic 45.0%
!!! CTTGTTTTTTGTGCACCTGC+TGG + chr1_2:49378974-49378993 Msa0074640:intron 45.0%
!!! TGTTTTTTGTGCACCTGCTG+GGG + chr1_2:49378976-49378995 Msa0074640:intron 45.0%
TAATGATAATCCACCCCAGC+AGG - chr1_2:49378992-49379011 None:intergenic 45.0%
! AGAGAAAGAGAGGCGTAAGT+GGG + chr1_2:49379377-49379396 Msa0074640:intron 45.0%
! AGGTAATGGTAGGGCTTTGT+AGG - chr1_2:49379585-49379604 None:intergenic 45.0%
TCATATATGGGCAGCAAGGA+TGG + chr1_2:49379625-49379644 Msa0074640:intron 45.0%
! AAGGATGGAGGCGTATTTAG+AGG + chr1_2:49379640-49379659 Msa0074640:intron 45.0%
GAAAATTCTCGTGACTGTCC+CGG + chr1_2:49380048-49380067 Msa0074640:intron 45.0%
GGACATGTTAAAGCTTACCG+TGG + chr1_2:49380111-49380130 Msa0074640:intron 45.0%
AGCATTTACAAGCTCTGCCA+CGG - chr1_2:49380131-49380150 None:intergenic 45.0%
AGGTCTGAAGGTTCAGTAGA+AGG + chr1_2:49380181-49380200 Msa0074640:intron 45.0%
AGAGACTTGTATTGCTGCTC+TGG - chr1_2:49380261-49380280 None:intergenic 45.0%
ACCATACACCAGACAGATGT+TGG + chr1_2:49380311-49380330 Msa0074640:intron 45.0%
ACCAACATCTGTCTGGTGTA+TGG - chr1_2:49380315-49380334 None:intergenic 45.0%
ATACACCAGACAGATGTTGG+TGG + chr1_2:49380314-49380333 Msa0074640:intron 45.0%
TGTCACAAGTGTGGTCAGTT+AGG + chr1_2:49380352-49380371 Msa0074640:intron 45.0%
TCAACATCAGGGAGAAGCTA+AGG + chr1_2:49380399-49380418 Msa0074640:intron 45.0%
TATAAGCCAACTCTCTCGAG+TGG - chr1_2:49380481-49380500 None:intergenic 45.0%
GCTCACGATCATAAGTCATG+TGG - chr1_2:49380521-49380540 None:intergenic 45.0%
GGCGCACTTATCGAAGTAAA+AGG + chr1_2:49380591-49380610 Msa0074640:intron 45.0%
CGAAGTAAAAGGCAAGGGAA+CGG + chr1_2:49380602-49380621 Msa0074640:intron 45.0%
CATGCTGCTGTAAACAAGGA+AGG + chr1_2:49380846-49380865 Msa0074640:intron 45.0%
CTGCTGTAAACAAGGAAGGA+AGG + chr1_2:49380850-49380869 Msa0074640:intron 45.0%
AAGGAAGGAAGGATTCAGGT+TGG + chr1_2:49380861-49380880 Msa0074640:intron 45.0%
AGTTCACGATAGATGGATGG+TGG - chr1_2:49380899-49380918 None:intergenic 45.0%
CAGAGTTCACGATAGATGGA+TGG - chr1_2:49380902-49380921 None:intergenic 45.0%
TCCATCTATCGTGAACTCTG+CGG + chr1_2:49380902-49380921 Msa0074640:intron 45.0%
TCTGTCAAAGAACCTGTTCC+AGG + chr1_2:49380969-49380988 Msa0074640:intron 45.0%
CTGTCAAAGAACCTGTTCCA+GGG + chr1_2:49380970-49380989 Msa0074640:intron 45.0%
TGTCAAAGAACCTGTTCCAG+GGG + chr1_2:49380971-49380990 Msa0074640:intron 45.0%
ATGCAGTTTCAGAGTCAAGG+AGG + chr1_2:49381481-49381500 Msa0074640:intron 45.0%
AGCTTGTATGGTTGTGCATC+GGG + chr1_2:49382034-49382053 Msa0074640:intron 45.0%
GTTTCAATTGGGGGATTCTG+CGG - chr1_2:49382565-49382584 None:intergenic 45.0%
!!! CAAACCGTGTTTTGAAGTCC+GGG + chr1_2:49382637-49382656 Msa0074640:intron 45.0%
TCTACCCGGACTTCAAAACA+CGG - chr1_2:49382644-49382663 None:intergenic 45.0%
!!! TTTTGAAGTCCGGGTAGATC+TGG + chr1_2:49382646-49382665 Msa0074640:intron 45.0%
!! GACATGGTGTTTTTGCTGTG+CGG - chr1_2:49382677-49382696 None:intergenic 45.0%
AATCCGGATATGGGGATTTG+TGG + chr1_2:49382881-49382900 Msa0074640:intron 45.0%
ATCCGGATATGGGGATTTGT+GGG + chr1_2:49382882-49382901 Msa0074640:intron 45.0%
ATCCCACAAATCCCCATATC+CGG - chr1_2:49382887-49382906 None:intergenic 45.0%
AATGCCACCTTTACAAAGGC+TGG - chr1_2:49383325-49383344 None:intergenic 45.0%
TGTAAAGGTGGCATTTAGGG+TGG + chr1_2:49383330-49383349 Msa0074640:intron 45.0%
! GTAAAGGTGGCATTTAGGGT+GGG + chr1_2:49383331-49383350 Msa0074640:intron 45.0%
CCTCATCATCGAGAACTGTT+AGG - chr1_2:49383892-49383911 None:intergenic 45.0%
CCTAACAGTTCTCGATGATG+AGG + chr1_2:49383889-49383908 Msa0074640:intron 45.0%
AAAGGTGAATGAGAGCAGGA+CGG + chr1_2:49383927-49383946 Msa0074640:intron 45.0%
! GGCCAACATCTATTTTCCCA+TGG + chr1_2:49384111-49384130 Msa0074640:intron 45.0%
TCACGGTAAGAGACCTATAC+AGG + chr1_2:49384323-49384342 Msa0074640:intron 45.0%
CTATGGTAGGAGACCTGTAT+AGG - chr1_2:49384339-49384358 None:intergenic 45.0%
ATTACGGCTTAGGCTATGGT+AGG - chr1_2:49384352-49384371 None:intergenic 45.0%
GCCGATAATCATTACGGCTT+AGG - chr1_2:49384362-49384381 None:intergenic 45.0%
! AAAATTCGGCTTGCAAGAGG+TGG - chr1_2:49384944-49384963 None:intergenic 45.0%
AAAGGGATAGGAGATTGTGG+GGG - chr1_2:49378461-49378480 None:intergenic 45.0%
GAAAGGGATAGGAGATTGTG+GGG - chr1_2:49378462-49378481 None:intergenic 45.0%
GAGAAAGGGATAGGAGATTG+TGG - chr1_2:49378464-49378483 None:intergenic 45.0%
! GCAATGATGGAGAAAGGGAT+AGG - chr1_2:49378473-49378492 None:intergenic 45.0%
!! GTTGTTGTTGTTGGTAGTGG+TGG - chr1_2:49378681-49378700 None:intergenic 45.0%
! TTGTCTGGTTCCAAAGCCAT+TGG - chr1_2:49378827-49378846 None:intergenic 45.0%
GATCTTCTTAAGCTGGAGGA+AGG - chr1_2:49378907-49378926 None:intergenic 45.0%
CTTGGATGACAAGGCAAACT+TGG - chr1_2:49378939-49378958 None:intergenic 45.0%
!!! CTTGTTTTTTGTGCACCTGC+TGG + chr1_2:49378974-49378993 Msa0074640:intron 45.0%
!!! TGTTTTTTGTGCACCTGCTG+GGG + chr1_2:49378976-49378995 Msa0074640:intron 45.0%
TAATGATAATCCACCCCAGC+AGG - chr1_2:49378992-49379011 None:intergenic 45.0%
! AGAGAAAGAGAGGCGTAAGT+GGG + chr1_2:49379377-49379396 Msa0074640:intron 45.0%
! AGGTAATGGTAGGGCTTTGT+AGG - chr1_2:49379585-49379604 None:intergenic 45.0%
TCATATATGGGCAGCAAGGA+TGG + chr1_2:49379625-49379644 Msa0074640:intron 45.0%
! AAGGATGGAGGCGTATTTAG+AGG + chr1_2:49379640-49379659 Msa0074640:intron 45.0%
GAAAATTCTCGTGACTGTCC+CGG + chr1_2:49380048-49380067 Msa0074640:intron 45.0%
GGACATGTTAAAGCTTACCG+TGG + chr1_2:49380111-49380130 Msa0074640:intron 45.0%
AGCATTTACAAGCTCTGCCA+CGG - chr1_2:49380131-49380150 None:intergenic 45.0%
AGGTCTGAAGGTTCAGTAGA+AGG + chr1_2:49380181-49380200 Msa0074640:intron 45.0%
AGAGACTTGTATTGCTGCTC+TGG - chr1_2:49380261-49380280 None:intergenic 45.0%
ACCATACACCAGACAGATGT+TGG + chr1_2:49380311-49380330 Msa0074640:intron 45.0%
ACCAACATCTGTCTGGTGTA+TGG - chr1_2:49380315-49380334 None:intergenic 45.0%
ATACACCAGACAGATGTTGG+TGG + chr1_2:49380314-49380333 Msa0074640:intron 45.0%
TGTCACAAGTGTGGTCAGTT+AGG + chr1_2:49380352-49380371 Msa0074640:intron 45.0%
TCAACATCAGGGAGAAGCTA+AGG + chr1_2:49380399-49380418 Msa0074640:intron 45.0%
TATAAGCCAACTCTCTCGAG+TGG - chr1_2:49380481-49380500 None:intergenic 45.0%
GCTCACGATCATAAGTCATG+TGG - chr1_2:49380521-49380540 None:intergenic 45.0%
GGCGCACTTATCGAAGTAAA+AGG + chr1_2:49380591-49380610 Msa0074640:intron 45.0%
CGAAGTAAAAGGCAAGGGAA+CGG + chr1_2:49380602-49380621 Msa0074640:intron 45.0%
CATGCTGCTGTAAACAAGGA+AGG + chr1_2:49380846-49380865 Msa0074640:intron 45.0%
CTGCTGTAAACAAGGAAGGA+AGG + chr1_2:49380850-49380869 Msa0074640:intron 45.0%
AAGGAAGGAAGGATTCAGGT+TGG + chr1_2:49380861-49380880 Msa0074640:intron 45.0%
AGTTCACGATAGATGGATGG+TGG - chr1_2:49380899-49380918 None:intergenic 45.0%
CAGAGTTCACGATAGATGGA+TGG - chr1_2:49380902-49380921 None:intergenic 45.0%
TCCATCTATCGTGAACTCTG+CGG + chr1_2:49380902-49380921 Msa0074640:intron 45.0%
ATGCAGTTTCAGAGTCAAGG+AGG + chr1_2:49381481-49381500 Msa0074640:intron 45.0%
AGCTTGTATGGTTGTGCATC+GGG + chr1_2:49382034-49382053 Msa0074640:intron 45.0%
GTTTCAATTGGGGGATTCTG+CGG - chr1_2:49382565-49382584 None:intergenic 45.0%
!!! CAAACCGTGTTTTGAAGTCC+GGG + chr1_2:49382637-49382656 Msa0074640:intron 45.0%
TCTACCCGGACTTCAAAACA+CGG - chr1_2:49382644-49382663 None:intergenic 45.0%
!!! TTTTGAAGTCCGGGTAGATC+TGG + chr1_2:49382646-49382665 Msa0074640:intron 45.0%
!! GACATGGTGTTTTTGCTGTG+CGG - chr1_2:49382677-49382696 None:intergenic 45.0%
AATCCGGATATGGGGATTTG+TGG + chr1_2:49382881-49382900 Msa0074640:intron 45.0%
ATCCGGATATGGGGATTTGT+GGG + chr1_2:49382882-49382901 Msa0074640:intron 45.0%
ATCCCACAAATCCCCATATC+CGG - chr1_2:49382887-49382906 None:intergenic 45.0%
AATGCCACCTTTACAAAGGC+TGG - chr1_2:49383325-49383344 None:intergenic 45.0%
TGTAAAGGTGGCATTTAGGG+TGG + chr1_2:49383330-49383349 Msa0074640:intron 45.0%
! GTAAAGGTGGCATTTAGGGT+GGG + chr1_2:49383331-49383350 Msa0074640:intron 45.0%
CCTCATCATCGAGAACTGTT+AGG - chr1_2:49383892-49383911 None:intergenic 45.0%
CCTAACAGTTCTCGATGATG+AGG + chr1_2:49383889-49383908 Msa0074640:intron 45.0%
AAAGGTGAATGAGAGCAGGA+CGG + chr1_2:49383927-49383946 Msa0074640:intron 45.0%
! GGCCAACATCTATTTTCCCA+TGG + chr1_2:49384111-49384130 Msa0074640:intron 45.0%
TCACGGTAAGAGACCTATAC+AGG + chr1_2:49384323-49384342 Msa0074640:intron 45.0%
GCCGATAATCATTACGGCTT+AGG - chr1_2:49384362-49384381 None:intergenic 45.0%
! AAAATTCGGCTTGCAAGAGG+TGG - chr1_2:49384944-49384963 None:intergenic 45.0%
AAAGGGATAGGAGATTGTGG+GGG - chr1_2:49378461-49378480 None:intergenic 45.0%
GAAAGGGATAGGAGATTGTG+GGG - chr1_2:49378462-49378481 None:intergenic 45.0%
GAGAAAGGGATAGGAGATTG+TGG - chr1_2:49378464-49378483 None:intergenic 45.0%
! GCAATGATGGAGAAAGGGAT+AGG - chr1_2:49378473-49378492 None:intergenic 45.0%
!! GTTGTTGTTGTTGGTAGTGG+TGG - chr1_2:49378681-49378700 None:intergenic 45.0%
! TTGTCTGGTTCCAAAGCCAT+TGG - chr1_2:49378827-49378846 None:intergenic 45.0%
AAGGGATAGGAGATTGTGGG+GGG - chr1_2:49378460-49378479 None:intergenic 50.0%
!! GTTGTTGTTGGTAGTGGTGG+TGG - chr1_2:49378678-49378697 None:intergenic 50.0%
GTGCAGGGTGGAAGTTCATA+TGG - chr1_2:49378781-49378800 None:intergenic 50.0%
TATGAACTTCCACCCTGCAC+CGG + chr1_2:49378781-49378800 Msa0074640:CDS 50.0%
GGCGACCTCATTAACACCAA+TGG + chr1_2:49378808-49378827 Msa0074640:CDS 50.0%
ATGACTGCGGAGAGAAAGAG+AGG + chr1_2:49379367-49379386 Msa0074640:intron 50.0%
! GAGAGAAAGAGAGGCGTAAG+TGG + chr1_2:49379376-49379395 Msa0074640:intron 50.0%
TATATGGGCAGCAAGGATGG+AGG + chr1_2:49379628-49379647 Msa0074640:intron 50.0%
GTGTGGTCAGTTAGGACATG+TGG + chr1_2:49380360-49380379 Msa0074640:intron 50.0%
GAAAGGCAAGAGCTTTGCCT+TGG + chr1_2:49380803-49380822 Msa0074640:intron 50.0%
! TCACGATAGATGGATGGTGG+AGG - chr1_2:49380896-49380915 None:intergenic 50.0%
CCATCTATCGTGAACTCTGC+GGG + chr1_2:49380903-49380922 Msa0074640:intron 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr1_2:49380992-49381011 Msa0074640:intron 50.0%
TGACAGCAACGTTGCACCTT+TGG - chr1_2:49381403-49381422 None:intergenic 50.0%
AAGGTGCAACGTTGCTGTCA+TGG + chr1_2:49381403-49381422 Msa0074640:intron 50.0%
GTTGCTGTCATGGAACCAGA+AGG + chr1_2:49381413-49381432 Msa0074640:intron 50.0%
!! AGTCAAGGAGGAGTGTTGAC+TGG + chr1_2:49381493-49381512 Msa0074640:intron 50.0%
! TCGTCGACTAGTTGTGGTAG+AGG - chr1_2:49383806-49383825 None:intergenic 50.0%
ACGGAAAGGTGAATGAGAGC+AGG + chr1_2:49383923-49383942 Msa0074640:intron 50.0%
!! TTGTTGGTGGTGGTGGATGA+TGG + chr1_2:49383977-49383996 Msa0074640:intron 50.0%
! CAAAGGGTGGCATTTAGGGT+GGG - chr1_2:49384156-49384175 None:intergenic 50.0%
ACAAAGGGTGGCATTTAGGG+TGG - chr1_2:49384157-49384176 None:intergenic 50.0%
CAAGAAACTACGTCTGCCAG+AGG - chr1_2:49384830-49384849 None:intergenic 50.0%
AAGGGATAGGAGATTGTGGG+GGG - chr1_2:49378460-49378479 None:intergenic 50.0%
!! GTTGTTGTTGGTAGTGGTGG+TGG - chr1_2:49378678-49378697 None:intergenic 50.0%
GTGCAGGGTGGAAGTTCATA+TGG - chr1_2:49378781-49378800 None:intergenic 50.0%
TATGAACTTCCACCCTGCAC+CGG + chr1_2:49378781-49378800 Msa0074640:CDS 50.0%
GGCGACCTCATTAACACCAA+TGG + chr1_2:49378808-49378827 Msa0074640:CDS 50.0%
ATGACTGCGGAGAGAAAGAG+AGG + chr1_2:49379367-49379386 Msa0074640:intron 50.0%
! GAGAGAAAGAGAGGCGTAAG+TGG + chr1_2:49379376-49379395 Msa0074640:intron 50.0%
TATATGGGCAGCAAGGATGG+AGG + chr1_2:49379628-49379647 Msa0074640:intron 50.0%
GTGTGGTCAGTTAGGACATG+TGG + chr1_2:49380360-49380379 Msa0074640:intron 50.0%
GAAAGGCAAGAGCTTTGCCT+TGG + chr1_2:49380803-49380822 Msa0074640:intron 50.0%
! TCACGATAGATGGATGGTGG+AGG - chr1_2:49380896-49380915 None:intergenic 50.0%
CCATCTATCGTGAACTCTGC+GGG + chr1_2:49380903-49380922 Msa0074640:intron 50.0%
GGAAAGCCTGGAACCAAAAC+AGG + chr1_2:49380992-49381011 Msa0074640:intron 50.0%
TGACAGCAACGTTGCACCTT+TGG - chr1_2:49381403-49381422 None:intergenic 50.0%
AAGGTGCAACGTTGCTGTCA+TGG + chr1_2:49381403-49381422 Msa0074640:intron 50.0%
GTTGCTGTCATGGAACCAGA+AGG + chr1_2:49381413-49381432 Msa0074640:intron 50.0%
!! AGTCAAGGAGGAGTGTTGAC+TGG + chr1_2:49381493-49381512 Msa0074640:intron 50.0%
! TCGTCGACTAGTTGTGGTAG+AGG - chr1_2:49383806-49383825 None:intergenic 50.0%
ACGGAAAGGTGAATGAGAGC+AGG + chr1_2:49383923-49383942 Msa0074640:intron 50.0%
!! TTGTTGGTGGTGGTGGATGA+TGG + chr1_2:49383977-49383996 Msa0074640:intron 50.0%
! CAAAGGGTGGCATTTAGGGT+GGG - chr1_2:49384156-49384175 None:intergenic 50.0%
ACAAAGGGTGGCATTTAGGG+TGG - chr1_2:49384157-49384176 None:intergenic 50.0%
CTACGGTAGGAGACCTGTAT+AGG - chr1_2:49391128-49391147 None:intergenic 50.0%
ATTACGGCTTAGGCTACGGT+AGG - chr1_2:49391141-49391160 None:intergenic 50.0%
CAAGAAACTACGTCTGCCAG+AGG - chr1_2:49384830-49384849 None:intergenic 50.0%
AAGGGATAGGAGATTGTGGG+GGG - chr1_2:49378460-49378479 None:intergenic 50.0%
!! GTTGTTGTTGGTAGTGGTGG+TGG - chr1_2:49378678-49378697 None:intergenic 50.0%
GTGCAGGGTGGAAGTTCATA+TGG - chr1_2:49378781-49378800 None:intergenic 50.0%
TATGAACTTCCACCCTGCAC+CGG + chr1_2:49378781-49378800 Msa0074640:CDS 50.0%
GGCGACCTCATTAACACCAA+TGG + chr1_2:49378808-49378827 Msa0074640:CDS 50.0%
!! GTTGTTGGTAGTGGTGGTGG+AGG - chr1_2:49378675-49378694 None:intergenic 55.0%
TTCACATCTGGCCAGGCACT+TGG + chr1_2:49378752-49378771 Msa0074640:CDS 55.0%
TCATATGGCCACCAAGTGCC+TGG - chr1_2:49378766-49378785 None:intergenic 55.0%
GTTAATGAGGTCGCCTCCAC+CGG - chr1_2:49378803-49378822 None:intergenic 55.0%
! TTTTTGTGCACCTGCTGGGG+TGG + chr1_2:49378979-49378998 Msa0074640:intron 55.0%
! TGACCTCTGGGAAGCTGTTG+AGG + chr1_2:49379667-49379686 Msa0074640:intron 55.0%
GGTCTCCACCAACATCTGTC+TGG - chr1_2:49380322-49380341 None:intergenic 55.0%
! ACTCTCTCGAGTGGTGTTGG+TGG - chr1_2:49380472-49380491 None:intergenic 55.0%
CCAACTCTCTCGAGTGGTGT+TGG - chr1_2:49380475-49380494 None:intergenic 55.0%
CCAACACCACTCGAGAGAGT+TGG + chr1_2:49380472-49380491 Msa0074640:intron 55.0%
CCCGCAGAGTTCACGATAGA+TGG - chr1_2:49380906-49380925 None:intergenic 55.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr1_2:49380990-49381009 None:intergenic 55.0%
TGAAGTCCGGGTAGATCTGG+AGG + chr1_2:49382649-49382668 Msa0074640:intron 55.0%
! GTGGCATTTAGGGTGGGTGA+GGG + chr1_2:49383337-49383356 Msa0074640:intron 55.0%
! CCATCGTCGTCGACTAGTTG+TGG - chr1_2:49383812-49383831 None:intergenic 55.0%
CCACAACTAGTCGACGACGA+TGG + chr1_2:49383809-49383828 Msa0074640:intron 55.0%
AGAACTGTTAGGGCAGCAGG+TGG - chr1_2:49383881-49383900 None:intergenic 55.0%
TCGAGAACTGTTAGGGCAGC+AGG - chr1_2:49383884-49383903 None:intergenic 55.0%
GAGAGCAGGACGGATCTAGA+TGG + chr1_2:49383937-49383956 Msa0074640:intron 55.0%
!! TTGGTGGTGGTGGATGATGG+AGG + chr1_2:49383980-49383999 Msa0074640:intron 55.0%
! GTGGCATTTAGGGTGGGTGA+AGG - chr1_2:49383337-49383356 None:intergenic 55.0%
GAAACTACGTCTGCCAGAGG+TGG - chr1_2:49384827-49384846 None:intergenic 55.0%
!! GTTGTTGGTAGTGGTGGTGG+AGG - chr1_2:49378675-49378694 None:intergenic 55.0%
TTCACATCTGGCCAGGCACT+TGG + chr1_2:49378752-49378771 Msa0074640:CDS 55.0%
TCATATGGCCACCAAGTGCC+TGG - chr1_2:49378766-49378785 None:intergenic 55.0%
GTTAATGAGGTCGCCTCCAC+CGG - chr1_2:49378803-49378822 None:intergenic 55.0%
! TTTTTGTGCACCTGCTGGGG+TGG + chr1_2:49378979-49378998 Msa0074640:intron 55.0%
! TGACCTCTGGGAAGCTGTTG+AGG + chr1_2:49379667-49379686 Msa0074640:intron 55.0%
GGTCTCCACCAACATCTGTC+TGG - chr1_2:49380322-49380341 None:intergenic 55.0%
! ACTCTCTCGAGTGGTGTTGG+TGG - chr1_2:49380472-49380491 None:intergenic 55.0%
CCAACTCTCTCGAGTGGTGT+TGG - chr1_2:49380475-49380494 None:intergenic 55.0%
CCAACACCACTCGAGAGAGT+TGG + chr1_2:49380472-49380491 Msa0074640:intron 55.0%
CCCGCAGAGTTCACGATAGA+TGG - chr1_2:49380906-49380925 None:intergenic 55.0%
! TTTGGTTCCAGGCTTTCCCC+TGG - chr1_2:49380990-49381009 None:intergenic 55.0%
TGAAGTCCGGGTAGATCTGG+AGG + chr1_2:49382649-49382668 Msa0074640:intron 55.0%
! GTGGCATTTAGGGTGGGTGA+GGG + chr1_2:49383337-49383356 Msa0074640:intron 55.0%
! CCATCGTCGTCGACTAGTTG+TGG - chr1_2:49383812-49383831 None:intergenic 55.0%
CCACAACTAGTCGACGACGA+TGG + chr1_2:49383809-49383828 Msa0074640:intron 55.0%
AGAACTGTTAGGGCAGCAGG+TGG - chr1_2:49383881-49383900 None:intergenic 55.0%
TCGAGAACTGTTAGGGCAGC+AGG - chr1_2:49383884-49383903 None:intergenic 55.0%
GAGAGCAGGACGGATCTAGA+TGG + chr1_2:49383937-49383956 Msa0074640:intron 55.0%
!! TTGGTGGTGGTGGATGATGG+AGG + chr1_2:49383980-49383999 Msa0074640:intron 55.0%
! GTGGCATTTAGGGTGGGTGA+AGG - chr1_2:49383337-49383356 None:intergenic 55.0%
GAAACTACGTCTGCCAGAGG+TGG - chr1_2:49384827-49384846 None:intergenic 55.0%
!! GTTGTTGGTAGTGGTGGTGG+AGG - chr1_2:49378675-49378694 None:intergenic 55.0%
TTCACATCTGGCCAGGCACT+TGG + chr1_2:49378752-49378771 Msa0074640:CDS 55.0%
TCATATGGCCACCAAGTGCC+TGG - chr1_2:49378766-49378785 None:intergenic 55.0%
GTTAATGAGGTCGCCTCCAC+CGG - chr1_2:49378803-49378822 None:intergenic 55.0%
!! AGTGGTGGTGGAGGTGGTGT+TGG - chr1_2:49378666-49378685 None:intergenic 60.0%
!! GTTGGTAGTGGTGGTGGAGG+TGG - chr1_2:49378672-49378691 None:intergenic 60.0%
ACATCTGGCCAGGCACTTGG+TGG + chr1_2:49378755-49378774 Msa0074640:CDS 60.0%
CCTCCTCAACAGCTTCCCAG+AGG - chr1_2:49379673-49379692 None:intergenic 60.0%
! CCTCTGGGAAGCTGTTGAGG+AGG + chr1_2:49379670-49379689 Msa0074640:intron 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr1_2:49380980-49380999 Msa0074640:intron 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr1_2:49380984-49381003 None:intergenic 60.0%
GCGGTACCTCCAGATCTACC+CGG - chr1_2:49382658-49382677 None:intergenic 60.0%
! GGTGGCATTTAGGGTGGGTG+AGG + chr1_2:49383336-49383355 Msa0074640:intron 60.0%
GGTGGAGGAAGACGTGGCAA+TGG - chr1_2:49383747-49383766 None:intergenic 60.0%
GAAACCACCACACCGGAGTG+CGG - chr1_2:49383768-49383787 None:intergenic 60.0%
TCGCTGCGAAACCACCACAC+CGG - chr1_2:49383775-49383794 None:intergenic 60.0%
CTTGCAAGAGGTGGAACGCG+TGG - chr1_2:49384935-49384954 None:intergenic 60.0%
!! AGTGGTGGTGGAGGTGGTGT+TGG - chr1_2:49378666-49378685 None:intergenic 60.0%
!! GTTGGTAGTGGTGGTGGAGG+TGG - chr1_2:49378672-49378691 None:intergenic 60.0%
ACATCTGGCCAGGCACTTGG+TGG + chr1_2:49378755-49378774 Msa0074640:CDS 60.0%
CCTCCTCAACAGCTTCCCAG+AGG - chr1_2:49379673-49379692 None:intergenic 60.0%
! CCTCTGGGAAGCTGTTGAGG+AGG + chr1_2:49379670-49379689 Msa0074640:intron 60.0%
ACCTGTTCCAGGGGAAAGCC+TGG + chr1_2:49380980-49380999 Msa0074640:intron 60.0%
TCCAGGCTTTCCCCTGGAAC+AGG - chr1_2:49380984-49381003 None:intergenic 60.0%
GCGGTACCTCCAGATCTACC+CGG - chr1_2:49382658-49382677 None:intergenic 60.0%
! GGTGGCATTTAGGGTGGGTG+AGG + chr1_2:49383336-49383355 Msa0074640:intron 60.0%
GAAACCACCACACCGGAGTG+CGG - chr1_2:49383768-49383787 None:intergenic 60.0%
TCGCTGCGAAACCACCACAC+CGG - chr1_2:49383775-49383794 None:intergenic 60.0%
CTTGCAAGAGGTGGAACGCG+TGG - chr1_2:49384935-49384954 None:intergenic 60.0%
!! AGTGGTGGTGGAGGTGGTGT+TGG - chr1_2:49378666-49378685 None:intergenic 60.0%
!! GTTGGTAGTGGTGGTGGAGG+TGG - chr1_2:49378672-49378691 None:intergenic 60.0%
ACATCTGGCCAGGCACTTGG+TGG + chr1_2:49378755-49378774 Msa0074640:CDS 60.0%
GAACTTCCACCCTGCACCGG+TGG + chr1_2:49378784-49378803 Msa0074640:CDS 65.0%
GAGTGCGGTGGAGGAAGACG+TGG - chr1_2:49383753-49383772 None:intergenic 65.0%
CGTCTTCCTCCACCGCACTC+CGG + chr1_2:49383753-49383772 Msa0074640:intron 65.0%
TCCACCACGCGATCCACCTC+TGG + chr1_2:49384811-49384830 Msa0074640:intron 65.0%
TCTGCCAGAGGTGGATCGCG+TGG - chr1_2:49384818-49384837 None:intergenic 65.0%
GAACTTCCACCCTGCACCGG+TGG + chr1_2:49378784-49378803 Msa0074640:CDS 65.0%
GGCGGAGGAAGACGTGGCAA+TGG - chr1_2:49390536-49390555 None:intergenic 65.0%
TCCACCACGCGATCCACCTC+TGG + chr1_2:49384811-49384830 Msa0074640:intron 65.0%
TCTGCCAGAGGTGGATCGCG+TGG - chr1_2:49384818-49384837 None:intergenic 65.0%
GAACTTCCACCCTGCACCGG+TGG + chr1_2:49378784-49378803 Msa0074640:CDS 65.0%
! CTTCCACCCTGCACCGGTGG+AGG + chr1_2:49378787-49378806 Msa0074640:CDS 70.0%
AGGTCGCCTCCACCGGTGCA+GGG - chr1_2:49378796-49378815 None:intergenic 70.0%
TCCTCCACCGCACTCCGGTG+TGG + chr1_2:49383758-49383777 Msa0074640:intron 70.0%
ACCACACCGGAGTGCGGTGG+AGG - chr1_2:49383762-49383781 None:intergenic 70.0%
TCCACCGCACTCCGGTGTGG+TGG + chr1_2:49383761-49383780 Msa0074640:intron 70.0%
ACCACCACACCGGAGTGCGG+TGG - chr1_2:49383765-49383784 None:intergenic 70.0%
GCCAGAGGTGGATCGCGTGG+TGG - chr1_2:49384815-49384834 None:intergenic 70.0%
! CTTCCACCCTGCACCGGTGG+AGG + chr1_2:49378787-49378806 Msa0074640:CDS 70.0%
AGGTCGCCTCCACCGGTGCA+GGG - chr1_2:49378796-49378815 None:intergenic 70.0%
GAGTGCGGCGGAGGAAGACG+TGG - chr1_2:49390542-49390561 None:intergenic 70.0%
CGTCTTCCTCCGCCGCACTC+CGG + chr1_2:49390542-49390561 Msa0074640:intron 70.0%
ACCACCACACCGGAGTGCGG+CGG - chr1_2:49383765-49383784 None:intergenic 70.0%
GCCAGAGGTGGATCGCGTGG+TGG - chr1_2:49384815-49384834 None:intergenic 70.0%
! CTTCCACCCTGCACCGGTGG+AGG + chr1_2:49378787-49378806 Msa0074640:CDS 70.0%
AGGTCGCCTCCACCGGTGCA+GGG - chr1_2:49378796-49378815 None:intergenic 70.0%
TCGCCTCCACCGGTGCAGGG+TGG - chr1_2:49378793-49378812 None:intergenic 75.0%
GAGGTCGCCTCCACCGGTGC+AGG - chr1_2:49378797-49378816 None:intergenic 75.0%
TCGCCTCCACCGGTGCAGGG+TGG - chr1_2:49378793-49378812 None:intergenic 75.0%
GAGGTCGCCTCCACCGGTGC+AGG - chr1_2:49378797-49378816 None:intergenic 75.0%
TCCTCCGCCGCACTCCGGTG+TGG + chr1_2:49390547-49390566 Msa0074640:intron 75.0%
ACCACACCGGAGTGCGGCGG+AGG - chr1_2:49390551-49390570 None:intergenic 75.0%
TCCGCCGCACTCCGGTGTGG+TGG + chr1_2:49390550-49390569 Msa0074640:intron 75.0%
TCGCCTCCACCGGTGCAGGG+TGG - chr1_2:49378793-49378812 None:intergenic 75.0%
GAGGTCGCCTCCACCGGTGC+AGG - chr1_2:49378797-49378816 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49378365 49392497 49378365 ID=Msa0074640;Name=Msa0074640
chr1_2 mRNA 49378365 49392497 49378365 ID=Msa0074640-mRNA-1;Parent=Msa0074640;Name=Msa0074640-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|1|0|0|5|0|398
chr1_2 exon 49378365 49378539 49378365 ID=Msa0074640-mRNA-1:exon:15112;Parent=Msa0074640-mRNA-1
chr1_2 exon 49378648 49378880 49378648 ID=Msa0074640-mRNA-1:exon:15113;Parent=Msa0074640-mRNA-1
chr1_2 exon 49385242 49385332 49385242 ID=Msa0074640-mRNA-1:exon:15114;Parent=Msa0074640-mRNA-1
chr1_2 exon 49385441 49385670 49385441 ID=Msa0074640-mRNA-1:exon:15115;Parent=Msa0074640-mRNA-1
chr1_2 exon 49392030 49392497 49392030 ID=Msa0074640-mRNA-1:exon:15116;Parent=Msa0074640-mRNA-1
chr1_2 CDS 49378365 49378539 49378365 ID=Msa0074640-mRNA-1:cds;Parent=Msa0074640-mRNA-1
chr1_2 CDS 49378648 49378880 49378648 ID=Msa0074640-mRNA-1:cds;Parent=Msa0074640-mRNA-1
chr1_2 CDS 49385242 49385332 49385242 ID=Msa0074640-mRNA-1:cds;Parent=Msa0074640-mRNA-1
chr1_2 CDS 49385441 49385670 49385441 ID=Msa0074640-mRNA-1:cds;Parent=Msa0074640-mRNA-1
chr1_2 CDS 49392030 49392497 49392030 ID=Msa0074640-mRNA-1:cds;Parent=Msa0074640-mRNA-1
Gene Sequence

>Msa0074640

ATGGAAGCATCTCACGAACAACAACTCTCACTAAACTCTACAGAACACACCATTAATGTCACCAAAGTGAATATAACTCAAAAGGTTATAAACCCCCCACAATCTCCTATCCCTTTCTCCATCATTGCTTATTCTTCTACTAGAGAAGGAGGAACAAGAACAAGAGAAAGTGCACGTCACAACAACAACACCAACACCACCTCCACCACCACTACCAACAACAACAACAACAACAACAACAAATCCAACGTTTATGGGTGCTCTATTTGTGGTTCTAAATTCACATCTGGCCAGGCACTTGGTGGCCATATGAACTTCCACCCTGCACCGGTGGAGGCGACCTCATTAACACCAATGGCTTTGGAACCAGACAAAGAAGATGAAGAACCACCTGCAGAAAAAACGAATGTTATAAACCCCCCACAATCTCCTATCCCTTTCTCCATCATTGCTTATTCTTCTACTAGAGAAGGAGGAACAAGAACAAGAGAAAGTGCACGTCACAACAACAACACCAACACCACCTCCACCACCACTACCAACAACAACAACAACAACAACAAATCCAACGTTTATGGGTGCTCTATTTGTGGTTCTAAATTCACATCTGGCCAGGCACTTGGTGGCCATATGAACTTCCACCCTGCACCGGTGGAGGCGACCTCATTAACACCAATGGCTTTGGAACCAGACAAAGAAGATGAAGAACCACCTGCAGAAAAAACGAATGTTATAAACCCCCCACAATCTCCTATCCCTTTCTCCATCATTGCTTATTCTTCTACTAGAGAAGGAGGAACAAGAACAAGAGAAAGTGCACGTTACAATGTGTATACATGCAAAACATGCAACAAAACATTCACTTCATTTCAAGCACTTGGAGGCCATAGAAAAGTTCACAAGAAGCCTAGAAAAGCTCATAGAAAAGGTCACAACAACAACACCAACACCACCTCCACCACCACTACCAACAACAACAACAACAACAACAAATCCAACGTTTATGGGTGCTCTATTTGTGGTTCTAAATTCACATCTGGCCAGGCACTTGGTGGCCATATGAACTTCCACCCTGCACCGGTGGAGGCGACCTCATTAACACCAATGGCTTTGGAACCAGACAAAGAAGATGAAGAACCACCTGCAGAAAAAACGAATGTCTCTTTGGATTTGGATCTCAACCTTCCTCCAGCTTAA
Protein sequence

>Msa0074640

MEASHEQQLSLNSTEHTINVTKVNITQKVINPPQSPIPFSIIAYSSTREGGTRTRESARHNNNTNTTSTTTTNNNNNNNNKSNVYGCSICGSKFTSGQALGGHMNFHPAPVEATSLTPMALEPDKEDEEPPAEKTNVINPPQSPIPFSIIAYSSTREGGTRTRESARHNNNTNTTSTTTTNNNNNNNKSNVYGCSICGSKFTSGQALGGHMNFHPAPVEATSLTPMALEPDKEDEEPPAEKTNVINPPQSPIPFSIIAYSSTREGGTRTRESARYNVYTCKTCNKTFTSFQALGGHRKVHKKPRKAHRKGHNNNTNTTSTTTTNNNNNNNKSNVYGCSICGSKFTSGQALGGHMNFHPAPVEATSLTPMALEPDKEDEEPPAEKTNVSLDLDLNLPPA*