Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085940 | sp|Q8L3W1|VRN1_ARATH | 24.432 | 352 | 199 | 12 | 12 | 319 | 11 | 339 | 8.23e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085940 | G7IBX1 | 80.061 | 326 | 23 | 5 | 1 | 320 | 1 | 290 | 1.15e-177 | 503 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0085940 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085940 | MtrunA17_Chr1g0208771 | 28.852 | 305 | 179 | 10 | 29 | 320 | 15 | 294 | 5.10e-23 | 99.0 |
| Msa0085940 | MtrunA17_Chr7g0233541 | 26.421 | 299 | 193 | 7 | 26 | 316 | 1 | 280 | 4.40e-22 | 94.4 |
| Msa0085940 | MtrunA17_Chr1g0163071 | 26.710 | 307 | 165 | 9 | 41 | 319 | 16 | 290 | 6.49e-20 | 88.2 |
| Msa0085940 | MtrunA17_Chr7g0233521 | 25.676 | 296 | 182 | 8 | 26 | 316 | 1 | 263 | 1.01e-18 | 84.7 |
| Msa0085940 | MtrunA17_Chr7g0233531 | 27.273 | 297 | 176 | 9 | 26 | 316 | 1 | 263 | 1.28e-17 | 81.3 |
| Msa0085940 | MtrunA17_Chr7g0233561 | 25.159 | 314 | 200 | 10 | 15 | 316 | 22 | 312 | 1.97e-17 | 81.6 |
| Msa0085940 | MtrunA17_Chr4g0067431 | 25.079 | 315 | 180 | 11 | 12 | 302 | 15 | 297 | 2.30e-15 | 75.5 |
| Msa0085940 | MtrunA17_Chr1g0163251 | 26.224 | 286 | 177 | 9 | 34 | 317 | 28 | 281 | 2.04e-12 | 67.4 |
| Msa0085940 | MtrunA17_Chr3g0103181 | 25.714 | 280 | 169 | 9 | 38 | 315 | 37 | 279 | 2.14e-12 | 66.6 |
| Msa0085940 | MtrunA17_Chr1g0154131 | 25.559 | 313 | 180 | 14 | 21 | 313 | 188 | 467 | 3.63e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0085940 | AT3G18990.1 | 24.432 | 352 | 199 | 12 | 12 | 319 | 11 | 339 | 8.37e-17 | 80.5 |
| Msa0085940 | AT3G18990.2 | 24.148 | 352 | 200 | 12 | 12 | 319 | 11 | 339 | 1.89e-16 | 79.7 |
| Msa0085940 | AT4G33280.1 | 27.645 | 293 | 171 | 15 | 43 | 319 | 55 | 322 | 5.41e-15 | 75.1 |
Find 42 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCTTTGAGTAGTAAATTT+TGG | 0.102919 | 1_2:+66326403 | Msa0085940:CDS |
| AACAGGAGAGTGCTATGTTT+TGG | 0.285292 | 1_2:+66328378 | Msa0085940:CDS |
| TGATAAAACCACATGGCTAT+TGG | 0.295086 | 1_2:+66326461 | Msa0085940:CDS |
| TTGTTGAGGCGAAGAGATTT+TGG | 0.299523 | 1_2:+66328402 | Msa0085940:CDS |
| AGCCTTCTTGCTGAGATATC+TGG | 0.323467 | 1_2:+66326777 | Msa0085940:CDS |
| TCAGGAAGCTGAAGACATAT+AGG | 0.408366 | 1_2:-66326441 | None:intergenic |
| AGAAGGCTGCGATAGCGTTT+AGG | 0.433134 | 1_2:-66326762 | None:intergenic |
| CAGGAAGCTGAAGACATATA+GGG | 0.442300 | 1_2:-66326440 | None:intergenic |
| GTTGTGACTGCGGCAAGCCT+TGG | 0.444590 | 1_2:-66328075 | None:intergenic |
| AGCGTTTAGGCTCCTCTTGT+TGG | 0.449128 | 1_2:-66326749 | None:intergenic |
| AAACCACATGGCTATTGGAT+TGG | 0.454515 | 1_2:+66326466 | Msa0085940:CDS |
| CTTAACAACACGTCAACAAC+AGG | 0.469084 | 1_2:+66328361 | Msa0085940:CDS |
| AAATATGCTGATGGGATATG+AGG | 0.485987 | 1_2:-66326592 | None:intergenic |
| TTTAGGCTCCTCTTGTTGGT+TGG | 0.495993 | 1_2:-66326745 | None:intergenic |
| TGAATGTAGCACTGGAGCAT+TGG | 0.496562 | 1_2:+66328046 | Msa0085940:CDS |
| TTAAAGCTTAACTCTTGCAA+TGG | 0.504842 | 1_2:+66328434 | Msa0085940:CDS |
| CATTTCTTTGAATGTGTGAT+GGG | 0.511289 | 1_2:-66328121 | None:intergenic |
| ACAGGCATTGTCATTTGAGA+TGG | 0.511802 | 1_2:-66326807 | None:intergenic |
| GGATAGGTTAAATATGCTGA+TGG | 0.514655 | 1_2:-66326601 | None:intergenic |
| GGAAAACAAGGAGGATAGCA+TGG | 0.518866 | 1_2:-66326658 | None:intergenic |
| TCATCAAATCGTCGTTTCGA+AGG | 0.518996 | 1_2:-66326377 | None:intergenic |
| GAAGCTATTGAATGTAGCAC+TGG | 0.527718 | 1_2:+66328038 | Msa0085940:CDS |
| ACACATTCAAAGAAATGTGC+TGG | 0.535216 | 1_2:+66328127 | Msa0085940:CDS |
| GGTTTCCCATGGGGAAAACA+AGG | 0.540143 | 1_2:-66326670 | None:intergenic |
| ACATTTCTTTGAATGTGTGA+TGG | 0.547251 | 1_2:-66328122 | None:intergenic |
| CTCATGTGTTATTATACAAG+TGG | 0.551356 | 1_2:+66326505 | Msa0085940:CDS |
| AGATGATAATAAGAAACTGC+AGG | 0.560494 | 1_2:-66326705 | None:intergenic |
| GAAGAAAACCAACCAACAAG+AGG | 0.567197 | 1_2:+66326737 | Msa0085940:CDS |
| GATAGGTTAAATATGCTGAT+GGG | 0.588873 | 1_2:-66326600 | None:intergenic |
| GAAAACAAGGAGGATAGCAT+GGG | 0.593037 | 1_2:-66326657 | None:intergenic |
| ACGGACAATAAATTGAAACT+AGG | 0.597678 | 1_2:+66328494 | Msa0085940:CDS |
| TGTGTTATTATACAAGTGGA+AGG | 0.599184 | 1_2:+66326509 | Msa0085940:CDS |
| GTCCAGATATCTCAGCAAGA+AGG | 0.611666 | 1_2:-66326779 | None:intergenic |
| TATCGTCGACTATGAAACAA+AGG | 0.632297 | 1_2:+66328006 | Msa0085940:CDS |
| TGGAGCATTGGAGAGAGCCA+AGG | 0.647399 | 1_2:+66328058 | Msa0085940:CDS |
| GTCGACTATGAAACAAAGGA+AGG | 0.665590 | 1_2:+66328010 | Msa0085940:CDS |
| CGTGTTGTTAAGAAGTTGCG+CGG | 0.667200 | 1_2:-66328350 | None:intergenic |
| TGAAAGATTTGTTGTGACTG+CGG | 0.679005 | 1_2:-66328085 | None:intergenic |
| TTTCCAATCCAATAGCCATG+TGG | 0.687940 | 1_2:-66326469 | None:intergenic |
| AGCTTCCTGATAAAACCACA+TGG | 0.693997 | 1_2:+66326454 | Msa0085940:CDS |
| TTCCCATGGGGAAAACAAGG+AGG | 0.706970 | 1_2:-66326667 | None:intergenic |
| AAAACAAGGAGGATAGCATG+GGG | 0.772194 | 1_2:-66326656 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAACAACTTAATTTA+AGG | - | chr1_2:66326906-66326925 | None:intergenic | 10.0% |
| !!! | TAAGTTGTTTTTAATTTTTA+CGG | + | chr1_2:66326911-66326930 | Msa0085940:intron | 10.0% |
| !!! | ACTTAAATTATTAGTTTTAT+CGG | + | chr1_2:66327224-66327243 | Msa0085940:intron | 10.0% |
| !! | ATTAAAAACAACTTAATTTA+AGG | - | chr1_2:66326906-66326925 | None:intergenic | 10.0% |
| !!! | TAAGTTGTTTTTAATTTTTA+CGG | + | chr1_2:66326911-66326930 | Msa0085940:intron | 10.0% |
| !!! | ACTTAAATTATTAGTTTTAT+CGG | + | chr1_2:66327224-66327243 | Msa0085940:intron | 10.0% |
| !! | TCTAATGATTAAAAAATCAT+AGG | + | chr1_2:66327094-66327113 | Msa0085940:intron | 15.0% |
| !! | CTAATGATTAAAAAATCATA+GGG | + | chr1_2:66327095-66327114 | Msa0085940:intron | 15.0% |
| !! | TCTAATGATTAAAAAATCAT+AGG | + | chr1_2:66327094-66327113 | Msa0085940:intron | 15.0% |
| !! | CTAATGATTAAAAAATCATA+GGG | + | chr1_2:66327095-66327114 | Msa0085940:intron | 15.0% |
| !!! | ATCAATAATTTTGCAAAACT+TGG | - | chr1_2:66326349-66326368 | None:intergenic | 20.0% |
| !! | TTAATTTAAGGAAACAAAAC+GGG | - | chr1_2:66326894-66326913 | None:intergenic | 20.0% |
| !! | CTTAATTTAAGGAAACAAAA+CGG | - | chr1_2:66326895-66326914 | None:intergenic | 20.0% |
| !!! | GCATCTCAAATTATTTTAAT+AGG | + | chr1_2:66327969-66327988 | Msa0085940:intron | 20.0% |
| !!! | TCAATATTACAACTTGTTAT+TGG | - | chr1_2:66328221-66328240 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTAATGATGGT+TGG | + | chr1_2:66328459-66328478 | Msa0085940:CDS | 20.0% |
| !!! | ATCAATAATTTTGCAAAACT+TGG | - | chr1_2:66326349-66326368 | None:intergenic | 20.0% |
| !! | TTAATTTAAGGAAACAAAAC+GGG | - | chr1_2:66326894-66326913 | None:intergenic | 20.0% |
| !! | CTTAATTTAAGGAAACAAAA+CGG | - | chr1_2:66326895-66326914 | None:intergenic | 20.0% |
| !!! | GCATCTCAAATTATTTTAAT+AGG | + | chr1_2:66327969-66327988 | Msa0085940:intron | 20.0% |
| !!! | TCAATATTACAACTTGTTAT+TGG | - | chr1_2:66328221-66328240 | None:intergenic | 20.0% |
| !!! | AAATATCTTTTAATGATGGT+TGG | + | chr1_2:66328459-66328478 | Msa0085940:CDS | 20.0% |
| !!! | AGCTTTGAGTAGTAAATTTT+GGG | + | chr1_2:66326404-66326423 | Msa0085940:CDS | 25.0% |
| ! | TAATTTAAGGAAACAAAACG+GGG | - | chr1_2:66326893-66326912 | None:intergenic | 25.0% |
| ! | AAAATAGTAGCAATACAATC+CGG | + | chr1_2:66326946-66326965 | Msa0085940:intron | 25.0% |
| ! | ATAACTAAGACAGCTATATA+CGG | - | chr1_2:66326998-66327017 | None:intergenic | 25.0% |
| ! | TGATTAAAAAATCATAGGGT+AGG | + | chr1_2:66327099-66327118 | Msa0085940:intron | 25.0% |
| ! | GATTAAAAAATCATAGGGTA+GGG | + | chr1_2:66327100-66327119 | Msa0085940:intron | 25.0% |
| ! | GCTTAACAATGATATATTTG+AGG | - | chr1_2:66327344-66327363 | None:intergenic | 25.0% |
| !! | ACTTTTATGCATAACAAAGT+TGG | - | chr1_2:66327507-66327526 | None:intergenic | 25.0% |
| !! | AAGCTGGTATTTAAAATTGT+GGG | - | chr1_2:66327700-66327719 | None:intergenic | 25.0% |
| !! | AAAGCTGGTATTTAAAATTG+TGG | - | chr1_2:66327701-66327720 | None:intergenic | 25.0% |
| ! | ATATCCACATGTAAAATATG+TGG | + | chr1_2:66327807-66327826 | Msa0085940:intron | 25.0% |
| ! | ATCAAAAACTACAACTTTGA+TGG | + | chr1_2:66327903-66327922 | Msa0085940:intron | 25.0% |
| ! | ATGATAAAAACTGTCAAAAC+AGG | + | chr1_2:66328322-66328341 | Msa0085940:intron | 25.0% |
| !! | GGACAAATATCTTTTAATGA+TGG | + | chr1_2:66328455-66328474 | Msa0085940:CDS | 25.0% |
| ! | ACAACTTCAATAAAAAGTCT+TGG | - | chr1_2:66328551-66328570 | None:intergenic | 25.0% |
| !!! | AGCTTTGAGTAGTAAATTTT+GGG | + | chr1_2:66326404-66326423 | Msa0085940:CDS | 25.0% |
| ! | TAATTTAAGGAAACAAAACG+GGG | - | chr1_2:66326893-66326912 | None:intergenic | 25.0% |
| ! | AAAATAGTAGCAATACAATC+CGG | + | chr1_2:66326946-66326965 | Msa0085940:intron | 25.0% |
| ! | ATAACTAAGACAGCTATATA+CGG | - | chr1_2:66326998-66327017 | None:intergenic | 25.0% |
| ! | TGATTAAAAAATCATAGGGT+AGG | + | chr1_2:66327099-66327118 | Msa0085940:intron | 25.0% |
| ! | GATTAAAAAATCATAGGGTA+GGG | + | chr1_2:66327100-66327119 | Msa0085940:intron | 25.0% |
| ! | GCTTAACAATGATATATTTG+AGG | - | chr1_2:66327344-66327363 | None:intergenic | 25.0% |
| !! | ACTTTTATGCATAACAAAGT+TGG | - | chr1_2:66327507-66327526 | None:intergenic | 25.0% |
| !! | AAGCTGGTATTTAAAATTGT+GGG | - | chr1_2:66327700-66327719 | None:intergenic | 25.0% |
| !! | AAAGCTGGTATTTAAAATTG+TGG | - | chr1_2:66327701-66327720 | None:intergenic | 25.0% |
| ! | ATATCCACATGTAAAATATG+TGG | + | chr1_2:66327807-66327826 | Msa0085940:intron | 25.0% |
| ! | ATCAAAAACTACAACTTTGA+TGG | + | chr1_2:66327903-66327922 | Msa0085940:intron | 25.0% |
| ! | ATGATAAAAACTGTCAAAAC+AGG | + | chr1_2:66328322-66328341 | Msa0085940:intron | 25.0% |
| !! | GGACAAATATCTTTTAATGA+TGG | + | chr1_2:66328455-66328474 | Msa0085940:CDS | 25.0% |
| ! | ACAACTTCAATAAAAAGTCT+TGG | - | chr1_2:66328551-66328570 | None:intergenic | 25.0% |
| !!! | CAGCTTTGAGTAGTAAATTT+TGG | + | chr1_2:66326403-66326422 | Msa0085940:CDS | 30.0% |
| ! | CTCATGTGTTATTATACAAG+TGG | + | chr1_2:66326505-66326524 | Msa0085940:CDS | 30.0% |
| ! | TGTGTTATTATACAAGTGGA+AGG | + | chr1_2:66326509-66326528 | Msa0085940:CDS | 30.0% |
| GATAGGTTAAATATGCTGAT+GGG | - | chr1_2:66326603-66326622 | None:intergenic | 30.0% | |
| CAGTTTCATCAAAAATGGAT+AGG | - | chr1_2:66326620-66326639 | None:intergenic | 30.0% | |
| !! | CTATCCATTTTTGATGAAAC+TGG | + | chr1_2:66326618-66326637 | Msa0085940:CDS | 30.0% |
| AGATGATAATAAGAAACTGC+AGG | - | chr1_2:66326708-66326727 | None:intergenic | 30.0% | |
| TAAAAATCTGCATACTCAAC+AGG | - | chr1_2:66326828-66326847 | None:intergenic | 30.0% | |
| !!! | ACCTCTTTTTTTAGGTTTTG+CGG | - | chr1_2:66326853-66326872 | None:intergenic | 30.0% |
| !!! | ACTCATGTACCTCTTTTTTT+AGG | - | chr1_2:66326861-66326880 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTTGATTTGTTGC+CGG | - | chr1_2:66326968-66326987 | None:intergenic | 30.0% |
| TTAAAATTGTGGGATGAAGT+GGG | - | chr1_2:66327690-66327709 | None:intergenic | 30.0% | |
| ! | TTTAAAATTGTGGGATGAAG+TGG | - | chr1_2:66327691-66327710 | None:intergenic | 30.0% |
| ! | AGAACCACATATTTTACATG+TGG | - | chr1_2:66327814-66327833 | None:intergenic | 30.0% |
| GTCATGTTGCTATAGAAATT+TGG | - | chr1_2:66327863-66327882 | None:intergenic | 30.0% | |
| CATTTCTTTGAATGTGTGAT+GGG | - | chr1_2:66328124-66328143 | None:intergenic | 30.0% | |
| ACATTTCTTTGAATGTGTGA+TGG | - | chr1_2:66328125-66328144 | None:intergenic | 30.0% | |
| TTAAAGCTTAACTCTTGCAA+TGG | + | chr1_2:66328434-66328453 | Msa0085940:CDS | 30.0% | |
| ACGGACAATAAATTGAAACT+AGG | + | chr1_2:66328494-66328513 | Msa0085940:CDS | 30.0% | |
| !!! | CAGCTTTGAGTAGTAAATTT+TGG | + | chr1_2:66326403-66326422 | Msa0085940:CDS | 30.0% |
| ! | CTCATGTGTTATTATACAAG+TGG | + | chr1_2:66326505-66326524 | Msa0085940:CDS | 30.0% |
| ! | TGTGTTATTATACAAGTGGA+AGG | + | chr1_2:66326509-66326528 | Msa0085940:CDS | 30.0% |
| GATAGGTTAAATATGCTGAT+GGG | - | chr1_2:66326603-66326622 | None:intergenic | 30.0% | |
| CAGTTTCATCAAAAATGGAT+AGG | - | chr1_2:66326620-66326639 | None:intergenic | 30.0% | |
| !! | CTATCCATTTTTGATGAAAC+TGG | + | chr1_2:66326618-66326637 | Msa0085940:CDS | 30.0% |
| AGATGATAATAAGAAACTGC+AGG | - | chr1_2:66326708-66326727 | None:intergenic | 30.0% | |
| TAAAAATCTGCATACTCAAC+AGG | - | chr1_2:66326828-66326847 | None:intergenic | 30.0% | |
| !!! | ACCTCTTTTTTTAGGTTTTG+CGG | - | chr1_2:66326853-66326872 | None:intergenic | 30.0% |
| !!! | ACTCATGTACCTCTTTTTTT+AGG | - | chr1_2:66326861-66326880 | None:intergenic | 30.0% |
| !!! | TCAAGTTTTTGATTTGTTGC+CGG | - | chr1_2:66326968-66326987 | None:intergenic | 30.0% |
| TTAAAATTGTGGGATGAAGT+GGG | - | chr1_2:66327690-66327709 | None:intergenic | 30.0% | |
| ! | TTTAAAATTGTGGGATGAAG+TGG | - | chr1_2:66327691-66327710 | None:intergenic | 30.0% |
| ! | AGAACCACATATTTTACATG+TGG | - | chr1_2:66327814-66327833 | None:intergenic | 30.0% |
| GTCATGTTGCTATAGAAATT+TGG | - | chr1_2:66327863-66327882 | None:intergenic | 30.0% | |
| CATTTCTTTGAATGTGTGAT+GGG | - | chr1_2:66328124-66328143 | None:intergenic | 30.0% | |
| ACATTTCTTTGAATGTGTGA+TGG | - | chr1_2:66328125-66328144 | None:intergenic | 30.0% | |
| TTAAAGCTTAACTCTTGCAA+TGG | + | chr1_2:66328434-66328453 | Msa0085940:CDS | 30.0% | |
| ACGGACAATAAATTGAAACT+AGG | + | chr1_2:66328494-66328513 | Msa0085940:CDS | 30.0% | |
| !!! | AATAGCCATGTGGTTTTATC+AGG | - | chr1_2:66326462-66326481 | None:intergenic | 35.0% |
| TGATAAAACCACATGGCTAT+TGG | + | chr1_2:66326461-66326480 | Msa0085940:CDS | 35.0% | |
| AAATATGCTGATGGGATATG+AGG | - | chr1_2:66326595-66326614 | None:intergenic | 35.0% | |
| GGATAGGTTAAATATGCTGA+TGG | - | chr1_2:66326604-66326623 | None:intergenic | 35.0% | |
| ! | CATTTTTGATGAAACTGGCA+CGG | + | chr1_2:66326623-66326642 | Msa0085940:CDS | 35.0% |
| !!! | TTGTTGTTTTGGTTTCCCAT+GGG | - | chr1_2:66326683-66326702 | None:intergenic | 35.0% |
| !!! | TTTGTTGTTTTGGTTTCCCA+TGG | - | chr1_2:66326684-66326703 | None:intergenic | 35.0% |
| !!! | AACTGCAGGTTTTGTTGTTT+TGG | - | chr1_2:66326694-66326713 | None:intergenic | 35.0% |
| ACCGCAAAACCTAAAAAAAG+AGG | + | chr1_2:66326849-66326868 | Msa0085940:CDS | 35.0% | |
| GCTGTCTTAGTTATAATTCG+TGG | + | chr1_2:66327004-66327023 | Msa0085940:intron | 35.0% | |
| ! | TAATTCGTGGACTACCATAT+TGG | + | chr1_2:66327017-66327036 | Msa0085940:intron | 35.0% |
| CTATAGAAGGCAAACCAATA+TGG | - | chr1_2:66327034-66327053 | None:intergenic | 35.0% | |
| !!! | TATTAGTTTTATCGGCGTGT+CGG | + | chr1_2:66327232-66327251 | Msa0085940:intron | 35.0% |
| !! | TTCAAATGGATGGGTTAAGT+GGG | - | chr1_2:66327367-66327386 | None:intergenic | 35.0% |
| !! | TTTCAAATGGATGGGTTAAG+TGG | - | chr1_2:66327368-66327387 | None:intergenic | 35.0% |
| TTGCAAGCTTTCAAATGGAT+GGG | - | chr1_2:66327376-66327395 | None:intergenic | 35.0% | |
| ATGTGCATTAGAAGTCATGA+GGG | - | chr1_2:66327477-66327496 | None:intergenic | 35.0% | |
| TATGTGCATTAGAAGTCATG+AGG | - | chr1_2:66327478-66327497 | None:intergenic | 35.0% | |
| ! | TATCGTCGACTATGAAACAA+AGG | + | chr1_2:66328006-66328025 | Msa0085940:CDS | 35.0% |
| !! | TGAAAGATTTGTTGTGACTG+CGG | - | chr1_2:66328088-66328107 | None:intergenic | 35.0% |
| ACACATTCAAAGAAATGTGC+TGG | + | chr1_2:66328127-66328146 | Msa0085940:CDS | 35.0% | |
| GTAAGTTTGTGCTACATTTC+TGG | + | chr1_2:66328149-66328168 | Msa0085940:intron | 35.0% | |
| ! | TGGTTGGAAGAATTTTGTCA+CGG | + | chr1_2:66328475-66328494 | Msa0085940:CDS | 35.0% |
| !!! | AATAGCCATGTGGTTTTATC+AGG | - | chr1_2:66326462-66326481 | None:intergenic | 35.0% |
| TGATAAAACCACATGGCTAT+TGG | + | chr1_2:66326461-66326480 | Msa0085940:CDS | 35.0% | |
| AAATATGCTGATGGGATATG+AGG | - | chr1_2:66326595-66326614 | None:intergenic | 35.0% | |
| GGATAGGTTAAATATGCTGA+TGG | - | chr1_2:66326604-66326623 | None:intergenic | 35.0% | |
| ! | CATTTTTGATGAAACTGGCA+CGG | + | chr1_2:66326623-66326642 | Msa0085940:CDS | 35.0% |
| !!! | TTGTTGTTTTGGTTTCCCAT+GGG | - | chr1_2:66326683-66326702 | None:intergenic | 35.0% |
| !!! | TTTGTTGTTTTGGTTTCCCA+TGG | - | chr1_2:66326684-66326703 | None:intergenic | 35.0% |
| !!! | AACTGCAGGTTTTGTTGTTT+TGG | - | chr1_2:66326694-66326713 | None:intergenic | 35.0% |
| ACCGCAAAACCTAAAAAAAG+AGG | + | chr1_2:66326849-66326868 | Msa0085940:CDS | 35.0% | |
| GCTGTCTTAGTTATAATTCG+TGG | + | chr1_2:66327004-66327023 | Msa0085940:intron | 35.0% | |
| ! | TAATTCGTGGACTACCATAT+TGG | + | chr1_2:66327017-66327036 | Msa0085940:intron | 35.0% |
| CTATAGAAGGCAAACCAATA+TGG | - | chr1_2:66327034-66327053 | None:intergenic | 35.0% | |
| !!! | TATTAGTTTTATCGGCGTGT+CGG | + | chr1_2:66327232-66327251 | Msa0085940:intron | 35.0% |
| !! | TTCAAATGGATGGGTTAAGT+GGG | - | chr1_2:66327367-66327386 | None:intergenic | 35.0% |
| !! | TTTCAAATGGATGGGTTAAG+TGG | - | chr1_2:66327368-66327387 | None:intergenic | 35.0% |
| TTGCAAGCTTTCAAATGGAT+GGG | - | chr1_2:66327376-66327395 | None:intergenic | 35.0% | |
| ATGTGCATTAGAAGTCATGA+GGG | - | chr1_2:66327477-66327496 | None:intergenic | 35.0% | |
| TATGTGCATTAGAAGTCATG+AGG | - | chr1_2:66327478-66327497 | None:intergenic | 35.0% | |
| ! | TATCGTCGACTATGAAACAA+AGG | + | chr1_2:66328006-66328025 | Msa0085940:CDS | 35.0% |
| !! | TGAAAGATTTGTTGTGACTG+CGG | - | chr1_2:66328088-66328107 | None:intergenic | 35.0% |
| ACACATTCAAAGAAATGTGC+TGG | + | chr1_2:66328127-66328146 | Msa0085940:CDS | 35.0% | |
| GTAAGTTTGTGCTACATTTC+TGG | + | chr1_2:66328149-66328168 | Msa0085940:intron | 35.0% | |
| ! | TGGTTGGAAGAATTTTGTCA+CGG | + | chr1_2:66328475-66328494 | Msa0085940:CDS | 35.0% |
| TCATCAAATCGTCGTTTCGA+AGG | - | chr1_2:66326380-66326399 | None:intergenic | 40.0% | |
| CAGGAAGCTGAAGACATATA+GGG | - | chr1_2:66326443-66326462 | None:intergenic | 40.0% | |
| TCAGGAAGCTGAAGACATAT+AGG | - | chr1_2:66326444-66326463 | None:intergenic | 40.0% | |
| AGCTTCCTGATAAAACCACA+TGG | + | chr1_2:66326454-66326473 | Msa0085940:CDS | 40.0% | |
| AAACCACATGGCTATTGGAT+TGG | + | chr1_2:66326466-66326485 | Msa0085940:CDS | 40.0% | |
| TTTCCAATCCAATAGCCATG+TGG | - | chr1_2:66326472-66326491 | None:intergenic | 40.0% | |
| CGTGCCAGTTTCATCAAAAA+TGG | - | chr1_2:66326625-66326644 | None:intergenic | 40.0% | |
| AAAACAAGGAGGATAGCATG+GGG | - | chr1_2:66326659-66326678 | None:intergenic | 40.0% | |
| GAAAACAAGGAGGATAGCAT+GGG | - | chr1_2:66326660-66326679 | None:intergenic | 40.0% | |
| !!! | TGTTGTTTTGGTTTCCCATG+GGG | - | chr1_2:66326682-66326701 | None:intergenic | 40.0% |
| GAAGAAAACCAACCAACAAG+AGG | + | chr1_2:66326737-66326756 | Msa0085940:CDS | 40.0% | |
| ! | ACAGGCATTGTCATTTGAGA+TGG | - | chr1_2:66326810-66326829 | None:intergenic | 40.0% |
| ! | CGTTGGTTGAGTTCTATAGA+AGG | - | chr1_2:66327047-66327066 | None:intergenic | 40.0% |
| CCACTTATGTTCAAACTCGT+TGG | - | chr1_2:66327064-66327083 | None:intergenic | 40.0% | |
| CCAACGAGTTTGAACATAAG+TGG | + | chr1_2:66327061-66327080 | Msa0085940:intron | 40.0% | |
| ! | GCACGAACACTTTTCAGATT+AGG | + | chr1_2:66327133-66327152 | Msa0085940:intron | 40.0% |
| CAGATTTGTCTCCCTACTAA+CGG | - | chr1_2:66327273-66327292 | None:intergenic | 40.0% | |
| !! | TGAGGTTGATGCAAAAGTAG+TGG | - | chr1_2:66327326-66327345 | None:intergenic | 40.0% |
| !! | TCAAATGGATGGGTTAAGTG+GGG | - | chr1_2:66327366-66327385 | None:intergenic | 40.0% |
| GTTGCAAGCTTTCAAATGGA+TGG | - | chr1_2:66327377-66327396 | None:intergenic | 40.0% | |
| GTCTGTTGCAAGCTTTCAAA+TGG | - | chr1_2:66327381-66327400 | None:intergenic | 40.0% | |
| GTCATGAGGGGAATTTATCA+AGG | - | chr1_2:66327464-66327483 | None:intergenic | 40.0% | |
| TGTGCATTAGAAGTCATGAG+GGG | - | chr1_2:66327476-66327495 | None:intergenic | 40.0% | |
| CTCGACAAGTAATTGTTCGT+TGG | - | chr1_2:66327572-66327591 | None:intergenic | 40.0% | |
| ACGAACAATTACTTGTCGAG+CGG | + | chr1_2:66327572-66327591 | Msa0085940:intron | 40.0% | |
| GGCAGTGAGCAAAATTACAA+CGG | - | chr1_2:66327617-66327636 | None:intergenic | 40.0% | |
| ! | TTGCTCACTGCCATTTATTG+AGG | + | chr1_2:66327625-66327644 | Msa0085940:intron | 40.0% |
| ! | TCACTGCCATTTATTGAGGA+AGG | + | chr1_2:66327629-66327648 | Msa0085940:intron | 40.0% |
| CTGCATCCTTCCTCAATAAA+TGG | - | chr1_2:66327638-66327657 | None:intergenic | 40.0% | |
| TGTGGAGTTTATGAGAAAGC+TGG | - | chr1_2:66327716-66327735 | None:intergenic | 40.0% | |
| GTCTCACTTGAGACATGTTT+GGG | + | chr1_2:66327757-66327776 | Msa0085940:intron | 40.0% | |
| TCTCACTTGAGACATGTTTG+GGG | + | chr1_2:66327758-66327777 | Msa0085940:intron | 40.0% | |
| GTCGACTATGAAACAAAGGA+AGG | + | chr1_2:66328010-66328029 | Msa0085940:CDS | 40.0% | |
| GAAGCTATTGAATGTAGCAC+TGG | + | chr1_2:66328038-66328057 | Msa0085940:CDS | 40.0% | |
| CTTAACAACACGTCAACAAC+AGG | + | chr1_2:66328361-66328380 | Msa0085940:CDS | 40.0% | |
| !!! | AACAGGAGAGTGCTATGTTT+TGG | + | chr1_2:66328378-66328397 | Msa0085940:CDS | 40.0% |
| !!! | ACAGGAGAGTGCTATGTTTT+GGG | + | chr1_2:66328379-66328398 | Msa0085940:CDS | 40.0% |
| !!! | TGCTATGTTTTGGGTTGTTG+AGG | + | chr1_2:66328388-66328407 | Msa0085940:CDS | 40.0% |
| ! | TTGTTGAGGCGAAGAGATTT+TGG | + | chr1_2:66328402-66328421 | Msa0085940:CDS | 40.0% |
| !! | GTGTGTTTTTCAGCTAGTTG+AGG | + | chr1_2:66328523-66328542 | Msa0085940:CDS | 40.0% |
| TCATCAAATCGTCGTTTCGA+AGG | - | chr1_2:66326380-66326399 | None:intergenic | 40.0% | |
| CAGGAAGCTGAAGACATATA+GGG | - | chr1_2:66326443-66326462 | None:intergenic | 40.0% | |
| TCAGGAAGCTGAAGACATAT+AGG | - | chr1_2:66326444-66326463 | None:intergenic | 40.0% | |
| AGCTTCCTGATAAAACCACA+TGG | + | chr1_2:66326454-66326473 | Msa0085940:CDS | 40.0% | |
| AAACCACATGGCTATTGGAT+TGG | + | chr1_2:66326466-66326485 | Msa0085940:CDS | 40.0% | |
| TTTCCAATCCAATAGCCATG+TGG | - | chr1_2:66326472-66326491 | None:intergenic | 40.0% | |
| CGTGCCAGTTTCATCAAAAA+TGG | - | chr1_2:66326625-66326644 | None:intergenic | 40.0% | |
| AAAACAAGGAGGATAGCATG+GGG | - | chr1_2:66326659-66326678 | None:intergenic | 40.0% | |
| GAAAACAAGGAGGATAGCAT+GGG | - | chr1_2:66326660-66326679 | None:intergenic | 40.0% | |
| !!! | TGTTGTTTTGGTTTCCCATG+GGG | - | chr1_2:66326682-66326701 | None:intergenic | 40.0% |
| GAAGAAAACCAACCAACAAG+AGG | + | chr1_2:66326737-66326756 | Msa0085940:CDS | 40.0% | |
| ! | ACAGGCATTGTCATTTGAGA+TGG | - | chr1_2:66326810-66326829 | None:intergenic | 40.0% |
| ! | CGTTGGTTGAGTTCTATAGA+AGG | - | chr1_2:66327047-66327066 | None:intergenic | 40.0% |
| CCACTTATGTTCAAACTCGT+TGG | - | chr1_2:66327064-66327083 | None:intergenic | 40.0% | |
| CCAACGAGTTTGAACATAAG+TGG | + | chr1_2:66327061-66327080 | Msa0085940:intron | 40.0% | |
| ! | GCACGAACACTTTTCAGATT+AGG | + | chr1_2:66327133-66327152 | Msa0085940:intron | 40.0% |
| CAGATTTGTCTCCCTACTAA+CGG | - | chr1_2:66327273-66327292 | None:intergenic | 40.0% | |
| !! | TGAGGTTGATGCAAAAGTAG+TGG | - | chr1_2:66327326-66327345 | None:intergenic | 40.0% |
| !! | TCAAATGGATGGGTTAAGTG+GGG | - | chr1_2:66327366-66327385 | None:intergenic | 40.0% |
| GTTGCAAGCTTTCAAATGGA+TGG | - | chr1_2:66327377-66327396 | None:intergenic | 40.0% | |
| GTCTGTTGCAAGCTTTCAAA+TGG | - | chr1_2:66327381-66327400 | None:intergenic | 40.0% | |
| GTCATGAGGGGAATTTATCA+AGG | - | chr1_2:66327464-66327483 | None:intergenic | 40.0% | |
| TGTGCATTAGAAGTCATGAG+GGG | - | chr1_2:66327476-66327495 | None:intergenic | 40.0% | |
| CTCGACAAGTAATTGTTCGT+TGG | - | chr1_2:66327572-66327591 | None:intergenic | 40.0% | |
| ACGAACAATTACTTGTCGAG+CGG | + | chr1_2:66327572-66327591 | Msa0085940:intron | 40.0% | |
| GGCAGTGAGCAAAATTACAA+CGG | - | chr1_2:66327617-66327636 | None:intergenic | 40.0% | |
| ! | TTGCTCACTGCCATTTATTG+AGG | + | chr1_2:66327625-66327644 | Msa0085940:intron | 40.0% |
| ! | TCACTGCCATTTATTGAGGA+AGG | + | chr1_2:66327629-66327648 | Msa0085940:intron | 40.0% |
| CTGCATCCTTCCTCAATAAA+TGG | - | chr1_2:66327638-66327657 | None:intergenic | 40.0% | |
| TGTGGAGTTTATGAGAAAGC+TGG | - | chr1_2:66327716-66327735 | None:intergenic | 40.0% | |
| GTCTCACTTGAGACATGTTT+GGG | + | chr1_2:66327757-66327776 | Msa0085940:intron | 40.0% | |
| TCTCACTTGAGACATGTTTG+GGG | + | chr1_2:66327758-66327777 | Msa0085940:intron | 40.0% | |
| GTCGACTATGAAACAAAGGA+AGG | + | chr1_2:66328010-66328029 | Msa0085940:CDS | 40.0% | |
| GAAGCTATTGAATGTAGCAC+TGG | + | chr1_2:66328038-66328057 | Msa0085940:CDS | 40.0% | |
| CTTAACAACACGTCAACAAC+AGG | + | chr1_2:66328361-66328380 | Msa0085940:CDS | 40.0% | |
| !!! | AACAGGAGAGTGCTATGTTT+TGG | + | chr1_2:66328378-66328397 | Msa0085940:CDS | 40.0% |
| !!! | ACAGGAGAGTGCTATGTTTT+GGG | + | chr1_2:66328379-66328398 | Msa0085940:CDS | 40.0% |
| !!! | TGCTATGTTTTGGGTTGTTG+AGG | + | chr1_2:66328388-66328407 | Msa0085940:CDS | 40.0% |
| ! | TTGTTGAGGCGAAGAGATTT+TGG | + | chr1_2:66328402-66328421 | Msa0085940:CDS | 40.0% |
| !! | GTGTGTTTTTCAGCTAGTTG+AGG | + | chr1_2:66328523-66328542 | Msa0085940:CDS | 40.0% |
| GGAAAACAAGGAGGATAGCA+TGG | - | chr1_2:66326661-66326680 | None:intergenic | 45.0% | |
| !!! | TATCCTCCTTGTTTTCCCCA+TGG | + | chr1_2:66326664-66326683 | Msa0085940:CDS | 45.0% |
| !!! | ATCCTCCTTGTTTTCCCCAT+GGG | + | chr1_2:66326665-66326684 | Msa0085940:CDS | 45.0% |
| TTTAGGCTCCTCTTGTTGGT+TGG | - | chr1_2:66326748-66326767 | None:intergenic | 45.0% | |
| AGCCTTCTTGCTGAGATATC+TGG | + | chr1_2:66326777-66326796 | Msa0085940:CDS | 45.0% | |
| GTCCAGATATCTCAGCAAGA+AGG | - | chr1_2:66326782-66326801 | None:intergenic | 45.0% | |
| CAGATTAGGTGTATCTCGTG+TGG | + | chr1_2:66327147-66327166 | Msa0085940:intron | 45.0% | |
| CGTTAGTAGGGAGACAAATC+TGG | + | chr1_2:66327271-66327290 | Msa0085940:intron | 45.0% | |
| TCCTCTCTTCAAGTCAAGGA+GGG | - | chr1_2:66327421-66327440 | None:intergenic | 45.0% | |
| TTCCTCTCTTCAAGTCAAGG+AGG | - | chr1_2:66327422-66327441 | None:intergenic | 45.0% | |
| ! | TCCTTGACTTGAAGAGAGGA+AGG | + | chr1_2:66327421-66327440 | Msa0085940:intron | 45.0% |
| TCCTTCCTCTCTTCAAGTCA+AGG | - | chr1_2:66327425-66327444 | None:intergenic | 45.0% | |
| CGTTGGAAGACATCTCTCTT+TGG | - | chr1_2:66327555-66327574 | None:intergenic | 45.0% | |
| CGTCTCACTTGAGACATGTT+TGG | + | chr1_2:66327756-66327775 | Msa0085940:intron | 45.0% | |
| ! | TGAATGTAGCACTGGAGCAT+TGG | + | chr1_2:66328046-66328065 | Msa0085940:CDS | 45.0% |
| TCGGAGCTTAATTCTGCGAT+TGG | + | chr1_2:66328282-66328301 | Msa0085940:intron | 45.0% | |
| ! | CGTGTTGTTAAGAAGTTGCG+CGG | - | chr1_2:66328353-66328372 | None:intergenic | 45.0% |
| GGAAAACAAGGAGGATAGCA+TGG | - | chr1_2:66326661-66326680 | None:intergenic | 45.0% | |
| !!! | TATCCTCCTTGTTTTCCCCA+TGG | + | chr1_2:66326664-66326683 | Msa0085940:CDS | 45.0% |
| !!! | ATCCTCCTTGTTTTCCCCAT+GGG | + | chr1_2:66326665-66326684 | Msa0085940:CDS | 45.0% |
| TTTAGGCTCCTCTTGTTGGT+TGG | - | chr1_2:66326748-66326767 | None:intergenic | 45.0% | |
| AGCCTTCTTGCTGAGATATC+TGG | + | chr1_2:66326777-66326796 | Msa0085940:CDS | 45.0% | |
| GTCCAGATATCTCAGCAAGA+AGG | - | chr1_2:66326782-66326801 | None:intergenic | 45.0% | |
| CAGATTAGGTGTATCTCGTG+TGG | + | chr1_2:66327147-66327166 | Msa0085940:intron | 45.0% | |
| CGTTAGTAGGGAGACAAATC+TGG | + | chr1_2:66327271-66327290 | Msa0085940:intron | 45.0% | |
| TCCTCTCTTCAAGTCAAGGA+GGG | - | chr1_2:66327421-66327440 | None:intergenic | 45.0% | |
| TTCCTCTCTTCAAGTCAAGG+AGG | - | chr1_2:66327422-66327441 | None:intergenic | 45.0% | |
| ! | TCCTTGACTTGAAGAGAGGA+AGG | + | chr1_2:66327421-66327440 | Msa0085940:intron | 45.0% |
| TCCTTCCTCTCTTCAAGTCA+AGG | - | chr1_2:66327425-66327444 | None:intergenic | 45.0% | |
| CGTTGGAAGACATCTCTCTT+TGG | - | chr1_2:66327555-66327574 | None:intergenic | 45.0% | |
| CGTCTCACTTGAGACATGTT+TGG | + | chr1_2:66327756-66327775 | Msa0085940:intron | 45.0% | |
| ! | TGAATGTAGCACTGGAGCAT+TGG | + | chr1_2:66328046-66328065 | Msa0085940:CDS | 45.0% |
| TCGGAGCTTAATTCTGCGAT+TGG | + | chr1_2:66328282-66328301 | Msa0085940:intron | 45.0% | |
| ! | CGTGTTGTTAAGAAGTTGCG+CGG | - | chr1_2:66328353-66328372 | None:intergenic | 45.0% |
| !! | TTATAATATTGAAATATAAT+CGG | + | chr1_2:66328263-66328282 | Msa0085940:intron | 5.0% |
| !! | TTATAATATTGAAATATAAT+CGG | + | chr1_2:66328263-66328282 | Msa0085940:intron | 5.0% |
| TTCCCATGGGGAAAACAAGG+AGG | - | chr1_2:66326670-66326689 | None:intergenic | 50.0% | |
| GGTTTCCCATGGGGAAAACA+AGG | - | chr1_2:66326673-66326692 | None:intergenic | 50.0% | |
| AGCGTTTAGGCTCCTCTTGT+TGG | - | chr1_2:66326752-66326771 | None:intergenic | 50.0% | |
| AGAAGGCTGCGATAGCGTTT+AGG | - | chr1_2:66326765-66326784 | None:intergenic | 50.0% | |
| !! | TTTTATCGGCGTGTCGGTGT+CGG | + | chr1_2:66327238-66327257 | Msa0085940:intron | 50.0% |
| GGTGTCCATGTCCGTTAGTA+GGG | + | chr1_2:66327259-66327278 | Msa0085940:intron | 50.0% | |
| ! | TGTCTCCCTACTAACGGACA+TGG | - | chr1_2:66327267-66327286 | None:intergenic | 50.0% |
| GAAAGCTTGCAACAGACCAG+AGG | + | chr1_2:66327384-66327403 | Msa0085940:intron | 50.0% | |
| CTCTCTTCAAGTCAAGGAGG+GGG | - | chr1_2:66327419-66327438 | None:intergenic | 50.0% | |
| CCTCTCTTCAAGTCAAGGAG+GGG | - | chr1_2:66327420-66327439 | None:intergenic | 50.0% | |
| GCATGCGGTGTACAACATTG+TGG | - | chr1_2:66327734-66327753 | None:intergenic | 50.0% | |
| CTCAAGTGAGACGTAGCATG+CGG | - | chr1_2:66327749-66327768 | None:intergenic | 50.0% | |
| TTCCCATGGGGAAAACAAGG+AGG | - | chr1_2:66326670-66326689 | None:intergenic | 50.0% | |
| GGTTTCCCATGGGGAAAACA+AGG | - | chr1_2:66326673-66326692 | None:intergenic | 50.0% | |
| AGCGTTTAGGCTCCTCTTGT+TGG | - | chr1_2:66326752-66326771 | None:intergenic | 50.0% | |
| AGAAGGCTGCGATAGCGTTT+AGG | - | chr1_2:66326765-66326784 | None:intergenic | 50.0% | |
| !! | TTTTATCGGCGTGTCGGTGT+CGG | + | chr1_2:66327238-66327257 | Msa0085940:intron | 50.0% |
| GGTGTCCATGTCCGTTAGTA+GGG | + | chr1_2:66327259-66327278 | Msa0085940:intron | 50.0% | |
| ! | TGTCTCCCTACTAACGGACA+TGG | - | chr1_2:66327267-66327286 | None:intergenic | 50.0% |
| GAAAGCTTGCAACAGACCAG+AGG | + | chr1_2:66327384-66327403 | Msa0085940:intron | 50.0% | |
| CTCTCTTCAAGTCAAGGAGG+GGG | - | chr1_2:66327419-66327438 | None:intergenic | 50.0% | |
| CCTCTCTTCAAGTCAAGGAG+GGG | - | chr1_2:66327420-66327439 | None:intergenic | 50.0% | |
| GCATGCGGTGTACAACATTG+TGG | - | chr1_2:66327734-66327753 | None:intergenic | 50.0% | |
| CTCAAGTGAGACGTAGCATG+CGG | - | chr1_2:66327749-66327768 | None:intergenic | 50.0% | |
| CGGTGTCCATGTCCGTTAGT+AGG | + | chr1_2:66327258-66327277 | Msa0085940:intron | 55.0% | |
| TCAAGTCAAGGAGGGGGATG+CGG | - | chr1_2:66327413-66327432 | None:intergenic | 55.0% | |
| ! | CCCCTCCTTGACTTGAAGAG+AGG | + | chr1_2:66327417-66327436 | Msa0085940:intron | 55.0% |
| GAGCGGCTGCACTAGTGTTT+GGG | + | chr1_2:66327589-66327608 | Msa0085940:intron | 55.0% | |
| !! | TGGAGCATTGGAGAGAGCCA+AGG | + | chr1_2:66328058-66328077 | Msa0085940:CDS | 55.0% |
| CGGTGTCCATGTCCGTTAGT+AGG | + | chr1_2:66327258-66327277 | Msa0085940:intron | 55.0% | |
| TCAAGTCAAGGAGGGGGATG+CGG | - | chr1_2:66327413-66327432 | None:intergenic | 55.0% | |
| ! | CCCCTCCTTGACTTGAAGAG+AGG | + | chr1_2:66327417-66327436 | Msa0085940:intron | 55.0% |
| GAGCGGCTGCACTAGTGTTT+GGG | + | chr1_2:66327589-66327608 | Msa0085940:intron | 55.0% | |
| !! | TGGAGCATTGGAGAGAGCCA+AGG | + | chr1_2:66328058-66328077 | Msa0085940:CDS | 55.0% |
| CGAGCGGCTGCACTAGTGTT+TGG | + | chr1_2:66327588-66327607 | Msa0085940:intron | 60.0% | |
| GTTGTGACTGCGGCAAGCCT+TGG | - | chr1_2:66328078-66328097 | None:intergenic | 60.0% | |
| CGAGCGGCTGCACTAGTGTT+TGG | + | chr1_2:66327588-66327607 | Msa0085940:intron | 60.0% | |
| GTTGTGACTGCGGCAAGCCT+TGG | - | chr1_2:66328078-66328097 | None:intergenic | 60.0% | |
| AGTCAAGGAGGGGGATGCGG+AGG | - | chr1_2:66327410-66327429 | None:intergenic | 65.0% | |
| AGTCAAGGAGGGGGATGCGG+AGG | - | chr1_2:66327410-66327429 | None:intergenic | 65.0% | |
| GAGGGGGATGCGGAGGCCTC+TGG | - | chr1_2:66327403-66327422 | None:intergenic | 75.0% | |
| GAGGGGGATGCGGAGGCCTC+TGG | - | chr1_2:66327403-66327422 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 66326318 | 66328595 | 66326318 | ID=Msa0085940;Name=Msa0085940 |
| chr1_2 | mRNA | 66326318 | 66328595 | 66326318 | ID=Msa0085940-mRNA-1;Parent=Msa0085940;Name=Msa0085940-mRNA-1;_AED=0.06;_eAED=0.15;_QI=0|0|0|1|1|1|3|0|320 |
| chr1_2 | exon | 66326318 | 66326870 | 66326318 | ID=Msa0085940-mRNA-1:exon:22433;Parent=Msa0085940-mRNA-1 |
| chr1_2 | exon | 66327991 | 66328148 | 66327991 | ID=Msa0085940-mRNA-1:exon:22434;Parent=Msa0085940-mRNA-1 |
| chr1_2 | exon | 66328344 | 66328595 | 66328344 | ID=Msa0085940-mRNA-1:exon:22435;Parent=Msa0085940-mRNA-1 |
| chr1_2 | CDS | 66326318 | 66326870 | 66326318 | ID=Msa0085940-mRNA-1:cds;Parent=Msa0085940-mRNA-1 |
| chr1_2 | CDS | 66327991 | 66328148 | 66327991 | ID=Msa0085940-mRNA-1:cds;Parent=Msa0085940-mRNA-1 |
| chr1_2 | CDS | 66328344 | 66328595 | 66328344 | ID=Msa0085940-mRNA-1:cds;Parent=Msa0085940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
