AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0086010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086010 MtrunA17_Chr1g0201911 96.127 568 19 1 1 568 1 565 0.0 1133
Msa0086010 MtrunA17_Chr1g0201941 46.090 601 203 15 3 500 2 584 3.35e-153 453
Msa0086010 MtrunA17_Chr6g0463941 53.819 288 112 3 52 318 52 339 1.52e-73 246
Msa0086010 MtrunA17_Chr6g0463941 58.642 162 61 2 363 521 449 607 2.46e-46 172
Msa0086010 MtrunA17_Chr6g0463941 43.617 94 52 1 51 143 460 553 8.02e-19 90.1
Msa0086010 MtrunA17_Chr6g0463941 41.379 87 50 1 375 461 55 140 5.78e-17 84.3
Msa0086010 MtrunA17_Chr1g0198171 30.118 425 222 13 36 432 95 472 1.09e-46 171
Msa0086010 MtrunA17_Chr1g0198171 38.129 139 81 3 329 466 71 205 3.44e-20 94.0
Msa0086010 MtrunA17_Chr2g0290511 37.860 243 123 4 241 463 116 350 8.72e-44 160
Msa0086010 MtrunA17_Chr2g0290511 39.091 110 59 2 54 162 261 363 3.72e-16 80.5
Msa0086010 MtrunA17_Chr7g0265831 36.462 277 154 6 46 317 107 366 2.86e-42 158
Msa0086010 MtrunA17_Chr7g0265831 41.463 123 60 4 368 479 108 229 2.09e-19 91.3
Msa0086010 MtrunA17_Chr1g0179191 34.014 294 162 6 55 343 131 397 4.76e-41 155
Msa0086010 MtrunA17_Chr1g0179191 42.202 109 61 2 364 471 120 227 3.07e-20 94.4
Msa0086010 MtrunA17_Chr1g0190851 33.582 268 127 6 239 464 251 509 1.85e-33 134
Msa0086010 MtrunA17_Chr1g0190851 37.273 110 66 2 53 159 416 525 2.64e-14 75.9
Msa0086010 MtrunA17_Chr7g0273941 31.174 247 142 7 240 465 241 480 2.90e-29 121
Msa0086010 MtrunA17_Chr7g0273941 43.434 99 46 2 55 143 381 479 3.37e-16 81.6
Msa0086010 MtrunA17_Chr5g0409071 30.075 133 81 3 335 465 10 132 1.07e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086010 AT1G76890.2 49.390 492 183 10 50 496 36 506 5.62e-141 420
Msa0086010 AT1G76880.1 52.183 481 194 8 50 497 56 533 2.87e-137 412
Msa0086010 AT5G03680.1 34.038 426 235 12 55 462 119 516 5.01e-60 209
Msa0086010 AT5G28300.1 37.838 259 127 6 240 464 300 558 4.28e-40 154
Msa0086010 AT3G10000.1 33.557 298 143 8 49 323 82 347 1.62e-38 148
Msa0086010 AT3G10000.1 35.915 142 81 3 343 477 53 191 6.56e-21 96.7
Msa0086010 AT1G33240.3 68.132 91 29 0 375 465 435 525 1.02e-37 147
Msa0086010 AT1G33240.2 68.132 91 29 0 375 465 396 486 1.25e-37 147
Msa0086010 AT1G33240.2 43.678 87 48 1 55 140 396 482 1.84e-16 83.2
Msa0086010 AT1G33240.1 68.132 91 29 0 375 465 435 525 2.29e-37 147
Msa0086010 AT3G10000.2 32.323 297 138 8 49 323 82 337 8.40e-35 137
Msa0086010 AT3G10000.2 34.043 141 75 3 343 477 53 181 8.14e-18 87.0
Msa0086010 AT5G47660.1 31.718 227 140 4 238 463 177 389 1.68e-27 115
Msa0086010 AT5G47660.1 41.304 92 51 2 55 145 303 392 3.83e-13 72.0
Msa0086010 AT3G25990.1 32.000 100 67 1 376 474 55 154 5.87e-11 65.1

Find 151 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTATAGAAAGAAGAGAAAA+TGG 0.189121 1_2:-66539227 Msa0086010:CDS
GAACCAAAGTATCAAGAAAA+TGG 0.192524 1_2:-66538748 Msa0086010:CDS
TTCATGTTTGGCAAAGAATT+TGG 0.196846 1_2:+66539318 None:intergenic
TTATTATTTGGTTGTGGTTT+TGG 0.205052 1_2:+66539471 None:intergenic
GAAAATGGAAGGACTATTTC+AGG 0.211748 1_2:-66539212 Msa0086010:CDS
TTTCCCACTTCTACCTTCTT+TGG 0.230158 1_2:+66539569 None:intergenic
GCTTCAAGTTCATTAAAATA+AGG 0.233076 1_2:+66538565 None:intergenic
ATTCTATGATCTCACGAAAT+TGG 0.233898 1_2:+66538042 None:intergenic
TATGTATGTTCATGTTCATC+TGG 0.252859 1_2:-66537849 Msa0086010:three_prime_UTR
GGAGGTCTCCATTGTTGTTC+TGG 0.263104 1_2:+66538445 None:intergenic
TTCCACTATAGTTGCTTTGC+TGG 0.273507 1_2:+66537700 None:intergenic
TCTTCCCACAATGGCGCTTT+TGG 0.281382 1_2:+66538724 None:intergenic
GAATTTCAAAATATGAATAA+TGG 0.294434 1_2:-66538862 Msa0086010:CDS
AACTTCTTCTTCCACGGCTT+CGG 0.296858 1_2:-66539268 Msa0086010:CDS
GAGCTGCTGATGATCTTTCT+TGG 0.298176 1_2:+66539037 None:intergenic
GTGAAGTTCATGCTCTAATA+AGG 0.301161 1_2:-66538786 Msa0086010:CDS
TGAAAATAGTCATATATTAA+AGG 0.303423 1_2:-66537952 Msa0086010:three_prime_UTR
GATGAGAGTGTGTTATTATT+TGG 0.316885 1_2:+66539459 None:intergenic
TCAAGAGAGCCAATGTTTCT+TGG 0.332675 1_2:+66540556 None:intergenic
GAGAATAGGTTGTTCATGTT+TGG 0.353362 1_2:+66539306 None:intergenic
TTAACGGTGGTGGAGGAAAT+AGG 0.356278 1_2:-66540587 Msa0086010:CDS
CTTCAAGTTCATTAAAATAA+GGG 0.357993 1_2:+66538566 None:intergenic
GAAACGAATTAGAACCAAAA+AGG 0.368019 1_2:+66538512 None:intergenic
TATTGTTTGTGTGGTTTCAT+TGG 0.368826 1_2:+66539422 None:intergenic
CTTGAAGATAAGATCAGATA+TGG 0.382626 1_2:-66540538 Msa0086010:CDS
GCTGGCGGTGGTTGTGGTGG+TGG 0.395680 1_2:+66538967 None:intergenic
AAGTCTTAAGGGTCCACTTT+GGG 0.401378 1_2:-66540496 Msa0086010:CDS
TCTGGTGCTGGCGGTGGTTG+TGG 0.405288 1_2:+66538961 None:intergenic
AACGAATGTGGTAGGGTTTG+TGG 0.409596 1_2:+66539374 None:intergenic
GAAGAGAAAGGAAGAGAGAT+TGG 0.412336 1_2:-66540642 Msa0086010:CDS
CACGGCTTCGGACGAAGACT+TGG 0.414918 1_2:-66539256 Msa0086010:CDS
TTCAAAATCTAAGTTTCTAC+AGG 0.417696 1_2:+66538128 None:intergenic
TGTTCTGGCTGCACCATCAA+TGG 0.420164 1_2:+66538460 None:intergenic
ATTGTTTGTGTGGTTTCATT+GGG 0.421975 1_2:+66539423 None:intergenic
ATGAATAATGGTTACAAAAG+TGG 0.422836 1_2:-66538850 Msa0086010:CDS
GTTTCATTGGGATTTATTGT+TGG 0.423348 1_2:+66539435 None:intergenic
TGCTTTGAGAATTCAAGAAA+TGG 0.425606 1_2:-66539091 Msa0086010:CDS
AATTCAACAATGTTGTTGTT+TGG 0.432386 1_2:+66538880 None:intergenic
TTTGGAACATTGTTGTTGTT+AGG 0.434536 1_2:+66539336 None:intergenic
CACTTTGGGAAGAGGTTTCA+AGG 0.436137 1_2:-66540482 Msa0086010:intron
AAGTAGATCATTGGAGTTGT+GGG 0.443877 1_2:-66537785 Msa0086010:three_prime_UTR
AACAAATAAACTTTCATCAA+TGG 0.444317 1_2:-66538251 Msa0086010:CDS
GACAGCTCTGGTGCTGGCGG+TGG 0.444859 1_2:+66538955 None:intergenic
AAGTTGTTGTGGTTGAGAAT+AGG 0.446298 1_2:+66539292 None:intergenic
AACCAAAGTATCAAGAAAAT+GGG 0.447699 1_2:-66538747 Msa0086010:CDS
ACAATACATTCTGAAAATCA+TGG 0.449937 1_2:-66537818 Msa0086010:three_prime_UTR
TGAAGAGACAAGGATACAAT+AGG 0.451641 1_2:-66538687 Msa0086010:CDS
ATCAATATTAACGGTGGTGG+AGG 0.457605 1_2:-66540594 Msa0086010:CDS
AACTTCAACTTCTTCTTCCA+CGG 0.460161 1_2:-66539274 Msa0086010:CDS
GTGCTTCTCCTTCTCCATCA+AGG 0.462199 1_2:-66538819 Msa0086010:CDS
GAGAGCCAATGTTTCTTGGC+GGG 0.464598 1_2:+66540560 None:intergenic
AATGGTTACAAAAGTGGTAA+TGG 0.466799 1_2:-66538844 Msa0086010:CDS
TGAGAATATTGTGGCGGATA+CGG 0.467895 1_2:-66540685 Msa0086010:CDS
CCAGCTTAAAAGTAGATCAT+TGG 0.469891 1_2:-66537794 Msa0086010:three_prime_UTR
CACGGAGACAGCTCTGGTGC+TGG 0.472655 1_2:+66538949 None:intergenic
TAAGGGTCCACTTTGGGAAG+AGG 0.472903 1_2:-66540490 Msa0086010:CDS
ATGTATGTTCATGTTCATCT+GGG 0.474894 1_2:-66537848 Msa0086010:three_prime_UTR
TTTCGTGATTCAAGTCTTAA+GGG 0.478392 1_2:-66540507 Msa0086010:CDS
AAGATGAATATCAATATTAA+CGG 0.478883 1_2:-66540603 Msa0086010:CDS
ACATTGTTGTTGTTAGGTTG+TGG 0.486612 1_2:+66539342 None:intergenic
AGGAAGAGAGATTGGTGGTG+AGG 0.490326 1_2:-66540634 Msa0086010:CDS
ACGGCGCAAAACGGAGGCGG+CGG 0.492141 1_2:-66540666 Msa0086010:CDS
TGAGACGATGGAGCCATTGA+TGG 0.495814 1_2:-66538473 Msa0086010:CDS
CAAGTCTTAAGGGTCCACTT+TGG 0.495967 1_2:-66540497 Msa0086010:CDS
ATCTTCTTCTATATGCAGCT+TGG 0.501249 1_2:-66540741 Msa0086010:exon
GGTGCTGGCGGTGGTTGTGG+TGG 0.502284 1_2:+66538964 None:intergenic
GCACCCTCTTCAAATGTAGT+TGG 0.502758 1_2:+66538424 None:intergenic
GATACGGCGCAAAACGGAGG+CGG 0.503294 1_2:-66540669 Msa0086010:CDS
GTCTGACACGGAGACAGCTC+TGG 0.505511 1_2:+66538943 None:intergenic
AATATCAATATTAACGGTGG+TGG 0.506001 1_2:-66540597 Msa0086010:CDS
CCCTCTTCAAATGTAGTTGG+AGG 0.507603 1_2:+66538427 None:intergenic
AAGCTGTATAATAGCTAGGT+AGG 0.507798 1_2:-66540771 Msa0086010:five_prime_UTR
TGTAGGAAACTAGCTGAACT+TGG 0.509833 1_2:-66539657 Msa0086010:intron
GTCTCCGTGTCAGACAGCTC+TGG 0.513072 1_2:-66538935 Msa0086010:CDS
TAGAAAGAAGAGAAAATGGA+AGG 0.520671 1_2:-66539223 Msa0086010:CDS
GAAGGAGAAACGAATGTGGT+AGG 0.521206 1_2:+66539366 None:intergenic
TGGGCCAAAAGCGCCATTGT+GGG 0.524060 1_2:-66538728 Msa0086010:CDS
AGGGTTTGTGGATGGAACAG+TGG 0.526949 1_2:+66539386 None:intergenic
GATAGCATGGAAGAAGATGA+AGG 0.531181 1_2:-66538304 Msa0086010:CDS
AGTGTGTTATTATTTGGTTG+TGG 0.532548 1_2:+66539465 None:intergenic
GACATATGATATTGTTTGTG+TGG 0.533682 1_2:+66539413 None:intergenic
ATAGTATACTCTCAACTCAA+AGG 0.534719 1_2:+66540846 None:intergenic
GGTAGAAGTGGGAAATCAGA+AGG 0.535840 1_2:-66539561 Msa0086010:CDS
TAGTATACTCTCAACTCAAA+GGG 0.536928 1_2:+66540847 None:intergenic
TTTGGCCACCTTGATGGAGA+AGG 0.538200 1_2:+66538811 None:intergenic
TATCACAAAAGAACCAAAGA+AGG 0.539271 1_2:-66539582 Msa0086010:CDS
GTGGCGGATACGGCGCAAAA+CGG 0.541031 1_2:-66540675 Msa0086010:CDS
CAAGTCTTCGTCCGAAGCCG+TGG 0.541149 1_2:+66539257 None:intergenic
ATATGAAGATGGAGATAGCA+TGG 0.544034 1_2:-66538317 Msa0086010:CDS
AGAGCCAATGTTTCTTGGCG+GGG 0.547860 1_2:+66540561 None:intergenic
TTGTTGTCACAACTTCATAA+CGG 0.553559 1_2:+66538269 None:intergenic
CTTGAAACCTCTTCCCAAAG+TGG 0.553632 1_2:+66540483 None:intergenic
TGGTGATGCAACAGTAATGA+TGG 0.554542 1_2:-66540721 Msa0086010:CDS
ATGGGCCAAAAGCGCCATTG+TGG 0.554967 1_2:-66538729 Msa0086010:CDS
GAGAAAGGAAGAGAGATTGG+TGG 0.555860 1_2:-66540639 Msa0086010:CDS
AGAACCAAAGAAGGTAGAAG+TGG 0.556101 1_2:-66539573 Msa0086010:CDS
AAAGTAGATCATTGGAGTTG+TGG 0.557615 1_2:-66537786 Msa0086010:three_prime_UTR
ATGTTGTTAAACAGTTCGCA+TGG 0.559297 1_2:-66537724 Msa0086010:three_prime_UTR
TTGTTGTTAGGTTGTGGTGA+AGG 0.559792 1_2:+66539348 None:intergenic
TTTAAATCTAAAAGTTCCTA+CGG 0.559809 1_2:-66538092 Msa0086010:three_prime_UTR
GGAGGCGGCGGTGAAGAGAA+AGG 0.561124 1_2:-66540654 Msa0086010:CDS
TAGCTATTATACAGCTTGAG+AGG 0.561313 1_2:+66540777 None:intergenic
AACATGGATGAATATGAAGA+TGG 0.566553 1_2:-66538328 Msa0086010:CDS
CAGTTGTATGAGACAAGATA+AGG 0.570962 1_2:-66538225 Msa0086010:exon
AGAAGAAGTTGAAGTTGTTG+TGG 0.571331 1_2:+66539281 None:intergenic
AAGGAGAAACGAATGTGGTA+GGG 0.571339 1_2:+66539367 None:intergenic
CGCATTGAGATGCTTTCATG+AGG 0.572412 1_2:+66540881 None:intergenic
TCTCAAGCTGTATAATAGCT+AGG 0.574638 1_2:-66540775 Msa0086010:five_prime_UTR
CAATACATTCTGAAAATCAT+GGG 0.575043 1_2:-66537817 Msa0086010:three_prime_UTR
AGCTGTATAATAGCTAGGTA+GGG 0.575558 1_2:-66540770 Msa0086010:five_prime_UTR
AGAGAGCCAATGTTTCTTGG+CGG 0.579042 1_2:+66540559 None:intergenic
CAAATACTACAAGAAAATGA+AGG 0.579174 1_2:-66538626 Msa0086010:CDS
TGAAGGAAAGTAACAAGCAA+AGG 0.584180 1_2:-66538609 Msa0086010:CDS
TAACACATCTGAAGCAGTAG+AGG 0.584767 1_2:-66538067 Msa0086010:three_prime_UTR
GTGGCCCCGCCAAGAAACAT+TGG 0.588347 1_2:-66540565 Msa0086010:CDS
GGAGACAGCTCTGGTGCTGG+CGG 0.588687 1_2:+66538952 None:intergenic
GATACAATAGGAATGCGAAA+AGG 0.589387 1_2:-66538675 Msa0086010:CDS
TGATGAAGAAGATGAAAACA+TGG 0.596066 1_2:-66538344 Msa0086010:CDS
ACCTCCAACTACATTTGAAG+AGG 0.596492 1_2:-66538428 Msa0086010:CDS
AAGATAAGATCAGATATGGA+TGG 0.598844 1_2:-66540534 Msa0086010:CDS
ATCCGCCACAATATTCTCAC+CGG 0.602769 1_2:+66540689 None:intergenic
AATGCAAAAGAAGTTTCTTG+AGG 0.603327 1_2:-66539154 Msa0086010:CDS
ACAAGTGCTTGCAAAACAAG+AGG 0.605374 1_2:-66539178 Msa0086010:CDS
GTAATGATGGAGACTTGCTC+CGG 0.605776 1_2:-66540708 Msa0086010:CDS
TAGAAGCTCAAAGAAGTGCA+AGG 0.606310 1_2:-66539628 Msa0086010:CDS
TGTTGTTAAACAGTTCGCAT+GGG 0.617675 1_2:-66537723 Msa0086010:three_prime_UTR
CTTCAGATGTGTTATACCGT+AGG 0.617936 1_2:+66538076 None:intergenic
AGCTATTATACAGCTTGAGA+GGG 0.625032 1_2:+66540778 None:intergenic
TGGTGCAGCCAGAACAACAA+TGG 0.627830 1_2:-66538453 Msa0086010:CDS
GAACCAAAGAAGGTAGAAGT+GGG 0.630560 1_2:-66539572 Msa0086010:CDS
AAAGGCATACCACAAACACC+TGG 0.637596 1_2:-66537934 Msa0086010:three_prime_UTR
TTGCTCCGGTGAGAATATTG+TGG 0.640151 1_2:-66540694 Msa0086010:CDS
GCAAAAGAAGAAGATGACAA+TGG 0.642786 1_2:-66538376 Msa0086010:CDS
GCGGATACGGCGCAAAACGG+AGG 0.646418 1_2:-66540672 Msa0086010:CDS
AGCATGGAAGAAGATGAAGG+AGG 0.648293 1_2:-66538301 Msa0086010:CDS
ATGAATATCAATATTAACGG+TGG 0.649447 1_2:-66540600 Msa0086010:CDS
ACACGATACTGCAAATGTAG+AGG 0.650015 1_2:+66538155 None:intergenic
CTCCGGTGAGAATATTGTGG+CGG 0.652038 1_2:-66540691 Msa0086010:CDS
CATGAAGTCAAATGAGACGA+TGG 0.663039 1_2:-66538485 Msa0086010:CDS
TACATTTGAAGAGGGTGCTG+TGG 0.663974 1_2:-66538419 Msa0086010:CDS
GCTGAAATATCTTCCCACAA+TGG 0.664092 1_2:+66538715 None:intergenic
CCTCCAACTACATTTGAAGA+GGG 0.665021 1_2:-66538427 Msa0086010:CDS
GGTTACAAAAGTGGTAATGG+TGG 0.667767 1_2:-66538841 Msa0086010:CDS
AATGTGGTAGGGTTTGTGGA+TGG 0.673197 1_2:+66539378 None:intergenic
CTTCTCCTTCTCCATCAAGG+TGG 0.673995 1_2:-66538816 Msa0086010:CDS
TCTCTGATCTCAGTTCATGA+CGG 0.674317 1_2:+66537751 None:intergenic
TCAGCTGCAATGAAGAGACA+AGG 0.690286 1_2:-66538697 Msa0086010:CDS
GCATTGAGATGCTTTCATGA+GGG 0.706051 1_2:+66540882 None:intergenic
GATGCCAGAGCTGTCTGACA+CGG 0.707672 1_2:+66538931 None:intergenic
TGGTGAAGGAGAAACGAATG+TGG 0.713404 1_2:+66539362 None:intergenic
ACGGTGGTGGAGGAAATAGG+TGG 0.747281 1_2:-66540584 Msa0086010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGGTTAATAAAATTATATA+TGG + chr1_2:66538558-66538577 None:intergenic 10.0%
!! TTAAACTTAAGTAATTTAAT+TGG + chr1_2:66538577-66538596 None:intergenic 10.0%
!!! GTGTTTTTTTTTTTTTTTTT+TGG - chr1_2:66538717-66538736 Msa0086010:CDS 10.0%
!! AAGATGAATATCAATATTAA+CGG - chr1_2:66538011-66538030 Msa0086010:three_prime_UTR 15.0%
!! ACAAAGTAATAAAAATTAGA+TGG + chr1_2:66538646-66538665 None:intergenic 15.0%
!! TAATTGATCAAAAAATCTAT+AGG + chr1_2:66539084-66539103 None:intergenic 15.0%
!! GAATTTCAAAATATGAATAA+TGG - chr1_2:66539752-66539771 Msa0086010:intron 15.0%
!!! TTTAAATTATTTTGTGCATT+TGG - chr1_2:66540611-66540630 Msa0086010:CDS 15.0%
!!! TTAAATTATTTTGTGCATTT+GGG - chr1_2:66540612-66540631 Msa0086010:CDS 15.0%
!! TGAAAATAGTCATATATTAA+AGG - chr1_2:66540662-66540681 Msa0086010:CDS 15.0%
!! CTTATAAACAAGAAAATGAA+AGG + chr1_2:66538242-66538261 None:intergenic 20.0%
!! AGTAATAAAAATTAGATGGA+AGG + chr1_2:66538642-66538661 None:intergenic 20.0%
!!! TTTGTGTGTTTCTTATTTAT+TGG - chr1_2:66538661-66538680 Msa0086010:CDS 20.0%
!! AAAAGTAAAAATTTGTGATG+AGG + chr1_2:66538786-66538805 None:intergenic 20.0%
!!! TTTTACTTTTTTTACGTGAA+AGG - chr1_2:66538796-66538815 Msa0086010:CDS 20.0%
!!! TTTTTCTTTTCCTTTTTCAA+TGG - chr1_2:66538827-66538846 Msa0086010:CDS 20.0%
!! TACATGTATGTATATATAGA+GGG + chr1_2:66538941-66538960 None:intergenic 20.0%
!!! CTTCAAGTTCATTAAAATAA+GGG + chr1_2:66540051-66540070 None:intergenic 20.0%
!! AACAAATAAACTTTCATCAA+TGG - chr1_2:66540363-66540382 Msa0086010:intron 20.0%
!! TTTAAATCTAAAAGTTCCTA+CGG - chr1_2:66540522-66540541 Msa0086010:CDS 20.0%
!!! ATAATGATGCTTTTTCAAAT+GGG + chr1_2:66540748-66540767 None:intergenic 20.0%
! GATCAGAAAAAATAAACAAG+AGG + chr1_2:66537805-66537824 None:intergenic 25.0%
! ATGAATATCAATATTAACGG+TGG - chr1_2:66538014-66538033 Msa0086010:three_prime_UTR 25.0%
!! CAAAAACTGATTGGTTAATT+TGG + chr1_2:66538305-66538324 None:intergenic 25.0%
!! CAAATTAACCAATCAGTTTT+TGG - chr1_2:66538303-66538322 Msa0086010:CDS 25.0%
!!! ATTTTTGTTTCCTTCTGAAA+AGG - chr1_2:66538378-66538397 Msa0086010:CDS 25.0%
!!! CATCTTCTTCAACTTTTTTT+AGG - chr1_2:66538606-66538625 Msa0086010:CDS 25.0%
!! TATTTATTGGTCACTCTTTT+AGG - chr1_2:66538674-66538693 Msa0086010:CDS 25.0%
! AAAAAAAAACACATGAAGCT+AGG + chr1_2:66538709-66538728 None:intergenic 25.0%
! GTTAGTATATCCATTGAAAA+AGG + chr1_2:66538840-66538859 None:intergenic 25.0%
! CTACATGTATGTATATATAG+AGG + chr1_2:66538942-66538961 None:intergenic 25.0%
! CTCTATATATACATACATGT+AGG - chr1_2:66538940-66538959 Msa0086010:CDS 25.0%
!! TTATTATTTGGTTGTGGTTT+TGG + chr1_2:66539146-66539165 None:intergenic 25.0%
! AGTATAGAAAGAAGAGAAAA+TGG - chr1_2:66539387-66539406 Msa0086010:CDS 25.0%
!! AATTCAACAATGTTGTTGTT+TGG + chr1_2:66539737-66539756 None:intergenic 25.0%
! ATGAATAATGGTTACAAAAG+TGG - chr1_2:66539764-66539783 Msa0086010:intron 25.0%
!! AACCAAAGTATCAAGAAAAT+GGG - chr1_2:66539867-66539886 Msa0086010:intron 25.0%
! CAAATACTACAAGAAAATGA+AGG - chr1_2:66539988-66540007 Msa0086010:intron 25.0%
!! GCTTCAAGTTCATTAAAATA+AGG + chr1_2:66540052-66540071 None:intergenic 25.0%
! TTCAAAATCTAAGTTTCTAC+AGG + chr1_2:66540489-66540508 None:intergenic 25.0%
!! GAGATCATAGAATTTTCTTT+TGG - chr1_2:66540582-66540601 Msa0086010:CDS 25.0%
!! AAATTGAATTTTTATGGTCC+AGG + chr1_2:66540701-66540720 None:intergenic 25.0%
!!! CATAATGATGCTTTTTCAAA+TGG + chr1_2:66540749-66540768 None:intergenic 25.0%
!! ACAATACATTCTGAAAATCA+TGG - chr1_2:66540796-66540815 Msa0086010:five_prime_UTR 25.0%
!! CAATACATTCTGAAAATCAT+GGG - chr1_2:66540797-66540816 Msa0086010:five_prime_UTR 25.0%
TAGTATACTCTCAACTCAAA+GGG + chr1_2:66537770-66537789 None:intergenic 30.0%
ATAGTATACTCTCAACTCAA+AGG + chr1_2:66537771-66537790 None:intergenic 30.0%
AATATCAATATTAACGGTGG+TGG - chr1_2:66538017-66538036 Msa0086010:three_prime_UTR 30.0%
CTTGAAGATAAGATCAGATA+TGG - chr1_2:66538076-66538095 Msa0086010:three_prime_UTR 30.0%
AAGATAAGATCAGATATGGA+TGG - chr1_2:66538080-66538099 Msa0086010:three_prime_UTR 30.0%
! TTTTCGTGATTCAAGTCTTA+AGG - chr1_2:66538106-66538125 Msa0086010:three_prime_UTR 30.0%
TTTCGTGATTCAAGTCTTAA+GGG - chr1_2:66538107-66538126 Msa0086010:three_prime_UTR 30.0%
AATAGGTTCCAAAAACTGAT+TGG + chr1_2:66538314-66538333 None:intergenic 30.0%
GTCAAAAAAAGCTCTTTGAT+TGG - chr1_2:66538351-66538370 Msa0086010:CDS 30.0%
! AAGATATATGCCTTTTCAGA+AGG + chr1_2:66538391-66538410 None:intergenic 30.0%
ATCTTATTCTCAAGTGTATG+AGG - chr1_2:66538406-66538425 Msa0086010:CDS 30.0%
ATGTATATATAGAGGGATCA+AGG + chr1_2:66538934-66538953 None:intergenic 30.0%
TATCACAAAAGAACCAAAGA+AGG - chr1_2:66539032-66539051 Msa0086010:CDS 30.0%
! AGTGTGTTATTATTTGGTTG+TGG + chr1_2:66539152-66539171 None:intergenic 30.0%
! GATGAGAGTGTGTTATTATT+TGG + chr1_2:66539158-66539177 None:intergenic 30.0%
GTTTCATTGGGATTTATTGT+TGG + chr1_2:66539182-66539201 None:intergenic 30.0%
ATTGTTTGTGTGGTTTCATT+GGG + chr1_2:66539194-66539213 None:intergenic 30.0%
TATTGTTTGTGTGGTTTCAT+TGG + chr1_2:66539195-66539214 None:intergenic 30.0%
GACATATGATATTGTTTGTG+TGG + chr1_2:66539204-66539223 None:intergenic 30.0%
! TTTGGAACATTGTTGTTGTT+AGG + chr1_2:66539281-66539300 None:intergenic 30.0%
TTCATGTTTGGCAAAGAATT+TGG + chr1_2:66539299-66539318 None:intergenic 30.0%
TAGAAAGAAGAGAAAATGGA+AGG - chr1_2:66539391-66539410 Msa0086010:CDS 30.0%
AATGCAAAAGAAGTTTCTTG+AGG - chr1_2:66539460-66539479 Msa0086010:CDS 30.0%
!! TGCTTTGAGAATTCAAGAAA+TGG - chr1_2:66539523-66539542 Msa0086010:CDS 30.0%
AATGGTTACAAAAGTGGTAA+TGG - chr1_2:66539770-66539789 Msa0086010:intron 30.0%
! GAACCAAAGTATCAAGAAAA+TGG - chr1_2:66539866-66539885 Msa0086010:intron 30.0%
! GAAAAGGTGCAAAGAAAAAT+GGG - chr1_2:66539955-66539974 Msa0086010:intron 30.0%
! AACAAAACACAGAACCTTTT+TGG - chr1_2:66540088-66540107 Msa0086010:intron 30.0%
GAAACGAATTAGAACCAAAA+AGG + chr1_2:66540105-66540124 None:intergenic 30.0%
TGATGAAGAAGATGAAAACA+TGG - chr1_2:66540270-66540289 Msa0086010:intron 30.0%
AACATGGATGAATATGAAGA+TGG - chr1_2:66540286-66540305 Msa0086010:intron 30.0%
TTGTTGTCACAACTTCATAA+CGG + chr1_2:66540348-66540367 None:intergenic 30.0%
ATTCTATGATCTCACGAAAT+TGG + chr1_2:66540575-66540594 None:intergenic 30.0%
TATGTATGTTCATGTTCATC+TGG - chr1_2:66540765-66540784 Msa0086010:five_prime_UTR 30.0%
ATGTATGTTCATGTTCATCT+GGG - chr1_2:66540766-66540785 Msa0086010:five_prime_UTR 30.0%
AGCTATTATACAGCTTGAGA+GGG + chr1_2:66537839-66537858 None:intergenic 35.0%
TAGCTATTATACAGCTTGAG+AGG + chr1_2:66537840-66537859 None:intergenic 35.0%
TCTCAAGCTGTATAATAGCT+AGG - chr1_2:66537839-66537858 Msa0086010:three_prime_UTR 35.0%
AAGCTGTATAATAGCTAGGT+AGG - chr1_2:66537843-66537862 Msa0086010:three_prime_UTR 35.0%
AGCTGTATAATAGCTAGGTA+GGG - chr1_2:66537844-66537863 Msa0086010:three_prime_UTR 35.0%
ATCTTCTTCTATATGCAGCT+TGG - chr1_2:66537873-66537892 Msa0086010:three_prime_UTR 35.0%
! TAGTTCTACTGACAGGAAAT+AGG + chr1_2:66538331-66538350 None:intergenic 35.0%
!!! TTTTGACTAGTTCTACTGAC+AGG + chr1_2:66538338-66538357 None:intergenic 35.0%
TTCTTCTATCTGAATCTTGC+TGG - chr1_2:66538497-66538516 Msa0086010:CDS 35.0%
!!! TATTTGGTTGTGGTTTTGGA+TGG + chr1_2:66539142-66539161 None:intergenic 35.0%
! ACATTGTTGTTGTTAGGTTG+TGG + chr1_2:66539275-66539294 None:intergenic 35.0%
GAGAATAGGTTGTTCATGTT+TGG + chr1_2:66539311-66539330 None:intergenic 35.0%
AAGTTGTTGTGGTTGAGAAT+AGG + chr1_2:66539325-66539344 None:intergenic 35.0%
AGAAGAAGTTGAAGTTGTTG+TGG + chr1_2:66539336-66539355 None:intergenic 35.0%
AACTTCAACTTCTTCTTCCA+CGG - chr1_2:66539340-66539359 Msa0086010:CDS 35.0%
GAAAATGGAAGGACTATTTC+AGG - chr1_2:66539402-66539421 Msa0086010:CDS 35.0%
GCATTTCTCCAAAAATTGTC+TGG - chr1_2:66539620-66539639 Msa0086010:CDS 35.0%
!! AGAGCATGAACTTCACTTTT+TGG + chr1_2:66539824-66539843 None:intergenic 35.0%
GTGAAGTTCATGCTCTAATA+AGG - chr1_2:66539828-66539847 Msa0086010:intron 35.0%
TGAAGAGACAAGGATACAAT+AGG - chr1_2:66539927-66539946 Msa0086010:intron 35.0%
GATACAATAGGAATGCGAAA+AGG - chr1_2:66539939-66539958 Msa0086010:intron 35.0%
! CGAAAAGGTGCAAAGAAAAA+TGG - chr1_2:66539954-66539973 Msa0086010:intron 35.0%
TGAAGGAAAGTAACAAGCAA+AGG - chr1_2:66540005-66540024 Msa0086010:intron 35.0%
GCAAAAGAAGAAGATGACAA+TGG - chr1_2:66540238-66540257 Msa0086010:intron 35.0%
ATATGAAGATGGAGATAGCA+TGG - chr1_2:66540297-66540316 Msa0086010:intron 35.0%
CAGTTGTATGAGACAAGATA+AGG - chr1_2:66540389-66540408 Msa0086010:intron 35.0%
!! CCAATGATCTACTTTTAAGC+TGG + chr1_2:66540823-66540842 None:intergenic 35.0%
CCAGCTTAAAAGTAGATCAT+TGG - chr1_2:66540820-66540839 Msa0086010:five_prime_UTR 35.0%
AAAGTAGATCATTGGAGTTG+TGG - chr1_2:66540828-66540847 Msa0086010:five_prime_UTR 35.0%
AAGTAGATCATTGGAGTTGT+GGG - chr1_2:66540829-66540848 Msa0086010:five_prime_UTR 35.0%
ATGTTGTTAAACAGTTCGCA+TGG - chr1_2:66540890-66540909 Msa0086010:five_prime_UTR 35.0%
TGTTGTTAAACAGTTCGCAT+GGG - chr1_2:66540891-66540910 Msa0086010:five_prime_UTR 35.0%
GCATTGAGATGCTTTCATGA+GGG + chr1_2:66537735-66537754 None:intergenic 40.0%
! TGGTGATGCAACAGTAATGA+TGG - chr1_2:66537893-66537912 Msa0086010:three_prime_UTR 40.0%
!! TGAGAATATTGTGGCGGATA+CGG - chr1_2:66537929-66537948 Msa0086010:three_prime_UTR 40.0%
GAAGAGAAAGGAAGAGAGAT+TGG - chr1_2:66537972-66537991 Msa0086010:three_prime_UTR 40.0%
! ATCAATATTAACGGTGGTGG+AGG - chr1_2:66538020-66538039 Msa0086010:three_prime_UTR 40.0%
TCAAGAGAGCCAATGTTTCT+TGG + chr1_2:66538061-66538080 None:intergenic 40.0%
AAGTCTTAAGGGTCCACTTT+GGG - chr1_2:66538118-66538137 Msa0086010:three_prime_UTR 40.0%
TATAGAGGGATCAAGGAAAG+TGG + chr1_2:66538927-66538946 None:intergenic 40.0%
TGTAGGAAACTAGCTGAACT+TGG - chr1_2:66538957-66538976 Msa0086010:CDS 40.0%
! TAGAAGCTCAAAGAAGTGCA+AGG - chr1_2:66538986-66539005 Msa0086010:CDS 40.0%
AGAACCAAAGAAGGTAGAAG+TGG - chr1_2:66539041-66539060 Msa0086010:CDS 40.0%
GAACCAAAGAAGGTAGAAGT+GGG - chr1_2:66539042-66539061 Msa0086010:CDS 40.0%
TTTCCCACTTCTACCTTCTT+TGG + chr1_2:66539048-66539067 None:intergenic 40.0%
AAGGAGAAACGAATGTGGTA+GGG + chr1_2:66539250-66539269 None:intergenic 40.0%
! TTGTTGTTAGGTTGTGGTGA+AGG + chr1_2:66539269-66539288 None:intergenic 40.0%
ACAAGTGCTTGCAAAACAAG+AGG - chr1_2:66539436-66539455 Msa0086010:CDS 40.0%
!! GGTTACAAAAGTGGTAATGG+TGG - chr1_2:66539773-66539792 Msa0086010:intron 40.0%
! GGCCCATTTTCTTGATACTT+TGG + chr1_2:66539872-66539891 None:intergenic 40.0%
GCTGAAATATCTTCCCACAA+TGG + chr1_2:66539902-66539921 None:intergenic 40.0%
CATGAAGTCAAATGAGACGA+TGG - chr1_2:66540129-66540148 Msa0086010:intron 40.0%
ACCTCCAACTACATTTGAAG+AGG - chr1_2:66540186-66540205 Msa0086010:intron 40.0%
CCTCCAACTACATTTGAAGA+GGG - chr1_2:66540187-66540206 Msa0086010:intron 40.0%
GATAGCATGGAAGAAGATGA+AGG - chr1_2:66540310-66540329 Msa0086010:intron 40.0%
ACACGATACTGCAAATGTAG+AGG + chr1_2:66540462-66540481 None:intergenic 40.0%
CTTCAGATGTGTTATACCGT+AGG + chr1_2:66540541-66540560 None:intergenic 40.0%
! TAACACATCTGAAGCAGTAG+AGG - chr1_2:66540547-66540566 Msa0086010:CDS 40.0%
! TTTTATGGTCCAGGTGTTTG+TGG + chr1_2:66540692-66540711 None:intergenic 40.0%
TCTCTGATCTCAGTTCATGA+CGG + chr1_2:66540866-66540885 None:intergenic 40.0%
CGCATTGAGATGCTTTCATG+AGG + chr1_2:66537736-66537755 None:intergenic 45.0%
! GTAATGATGGAGACTTGCTC+CGG - chr1_2:66537906-66537925 Msa0086010:three_prime_UTR 45.0%
TTGCTCCGGTGAGAATATTG+TGG - chr1_2:66537920-66537939 Msa0086010:three_prime_UTR 45.0%
ATCCGCCACAATATTCTCAC+CGG + chr1_2:66537928-66537947 None:intergenic 45.0%
GAGAAAGGAAGAGAGATTGG+TGG - chr1_2:66537975-66537994 Msa0086010:three_prime_UTR 45.0%
!! TTAACGGTGGTGGAGGAAAT+AGG - chr1_2:66538027-66538046 Msa0086010:three_prime_UTR 45.0%
AGAGAGCCAATGTTTCTTGG+CGG + chr1_2:66538058-66538077 None:intergenic 45.0%
CAAGTCTTAAGGGTCCACTT+TGG - chr1_2:66538117-66538136 Msa0086010:three_prime_UTR 45.0%
CTTGAAACCTCTTCCCAAAG+TGG + chr1_2:66538134-66538153 None:intergenic 45.0%
! CACTTTGGGAAGAGGTTTCA+AGG - chr1_2:66538132-66538151 Msa0086010:three_prime_UTR 45.0%
GGTAGAAGTGGGAAATCAGA+AGG - chr1_2:66539053-66539072 Msa0086010:CDS 45.0%
AATGTGGTAGGGTTTGTGGA+TGG + chr1_2:66539239-66539258 None:intergenic 45.0%
AACGAATGTGGTAGGGTTTG+TGG + chr1_2:66539243-66539262 None:intergenic 45.0%
GAAGGAGAAACGAATGTGGT+AGG + chr1_2:66539251-66539270 None:intergenic 45.0%
TGGTGAAGGAGAAACGAATG+TGG + chr1_2:66539255-66539274 None:intergenic 45.0%
AACTTCTTCTTCCACGGCTT+CGG - chr1_2:66539346-66539365 Msa0086010:CDS 45.0%
GAGCTGCTGATGATCTTTCT+TGG + chr1_2:66539580-66539599 None:intergenic 45.0%
! GTGGCTGTCCAGACAATTTT+TGG + chr1_2:66539631-66539650 None:intergenic 45.0%
!!! TCACTTTTTGGCCACCTTGA+TGG + chr1_2:66539812-66539831 None:intergenic 45.0%
TCAGCTGCAATGAAGAGACA+AGG - chr1_2:66539917-66539936 Msa0086010:intron 45.0%
CCCTCTTCAAATGTAGTTGG+AGG + chr1_2:66540190-66540209 None:intergenic 45.0%
GCACCCTCTTCAAATGTAGT+TGG + chr1_2:66540193-66540212 None:intergenic 45.0%
!! TACATTTGAAGAGGGTGCTG+TGG - chr1_2:66540195-66540214 Msa0086010:intron 45.0%
AGCATGGAAGAAGATGAAGG+AGG - chr1_2:66540313-66540332 Msa0086010:intron 45.0%
! AAAGGCATACCACAAACACC+TGG - chr1_2:66540680-66540699 Msa0086010:CDS 45.0%
!!! AAAAATAAATTGAATTTTTA+TGG + chr1_2:66540707-66540726 None:intergenic 5.0%
!!! ATTTTTTTCTTTTTAAATTA+TGG - chr1_2:66540721-66540740 Msa0086010:CDS 5.0%
CTCCGGTGAGAATATTGTGG+CGG - chr1_2:66537923-66537942 Msa0086010:three_prime_UTR 50.0%
!! AGGAAGAGAGATTGGTGGTG+AGG - chr1_2:66537980-66537999 Msa0086010:three_prime_UTR 50.0%
AGAGCCAATGTTTCTTGGCG+GGG + chr1_2:66538056-66538075 None:intergenic 50.0%
GAGAGCCAATGTTTCTTGGC+GGG + chr1_2:66538057-66538076 None:intergenic 50.0%
! TAAGGGTCCACTTTGGGAAG+AGG - chr1_2:66538124-66538143 Msa0086010:three_prime_UTR 50.0%
AAGTGGAGGAGACAGAAAGG+AGG + chr1_2:66538910-66538929 None:intergenic 50.0%
GGAAAGTGGAGGAGACAGAA+AGG + chr1_2:66538913-66538932 None:intergenic 50.0%
AGAGGGATCAAGGAAAGTGG+AGG + chr1_2:66538924-66538943 None:intergenic 50.0%
AGGGTTTGTGGATGGAACAG+TGG + chr1_2:66539231-66539250 None:intergenic 50.0%
GTGCTTCTCCTTCTCCATCA+AGG - chr1_2:66539795-66539814 Msa0086010:intron 50.0%
CTTCTCCTTCTCCATCAAGG+TGG - chr1_2:66539798-66539817 Msa0086010:intron 50.0%
TTTGGCCACCTTGATGGAGA+AGG + chr1_2:66539806-66539825 None:intergenic 50.0%
! TCTTCCCACAATGGCGCTTT+TGG + chr1_2:66539893-66539912 None:intergenic 50.0%
TGAGACGATGGAGCCATTGA+TGG - chr1_2:66540141-66540160 Msa0086010:intron 50.0%
! TGTTCTGGCTGCACCATCAA+TGG + chr1_2:66540157-66540176 None:intergenic 50.0%
TGGTGCAGCCAGAACAACAA+TGG - chr1_2:66540161-66540180 Msa0086010:intron 50.0%
! GGAGGTCTCCATTGTTGTTC+TGG + chr1_2:66540172-66540191 None:intergenic 50.0%
!! ACGGTGGTGGAGGAAATAGG+TGG - chr1_2:66538030-66538049 Msa0086010:three_prime_UTR 55.0%
GATGCCAGAGCTGTCTGACA+CGG + chr1_2:66539686-66539705 None:intergenic 55.0%
!! ATGGGCCAAAAGCGCCATTG+TGG - chr1_2:66539885-66539904 Msa0086010:intron 55.0%
!! TGGGCCAAAAGCGCCATTGT+GGG - chr1_2:66539886-66539905 Msa0086010:intron 55.0%
!! GTGGCGGATACGGCGCAAAA+CGG - chr1_2:66537939-66537958 Msa0086010:three_prime_UTR 60.0%
GATACGGCGCAAAACGGAGG+CGG - chr1_2:66537945-66537964 Msa0086010:three_prime_UTR 60.0%
GTGGCCCCGCCAAGAAACAT+TGG - chr1_2:66538049-66538068 Msa0086010:three_prime_UTR 60.0%
CAAGTCTTCGTCCGAAGCCG+TGG + chr1_2:66539360-66539379 None:intergenic 60.0%
CACGGCTTCGGACGAAGACT+TGG - chr1_2:66539358-66539377 Msa0086010:CDS 60.0%
GTCTGACACGGAGACAGCTC+TGG + chr1_2:66539674-66539693 None:intergenic 60.0%
GTCTCCGTGTCAGACAGCTC+TGG - chr1_2:66539679-66539698 Msa0086010:intron 60.0%
GCGGATACGGCGCAAAACGG+AGG - chr1_2:66537942-66537961 Msa0086010:three_prime_UTR 65.0%
GGAGGCGGCGGTGAAGAGAA+AGG - chr1_2:66537960-66537979 Msa0086010:three_prime_UTR 65.0%
!! TCTGGTGCTGGCGGTGGTTG+TGG + chr1_2:66539656-66539675 None:intergenic 65.0%
! GGAGACAGCTCTGGTGCTGG+CGG + chr1_2:66539665-66539684 None:intergenic 65.0%
! CACGGAGACAGCTCTGGTGC+TGG + chr1_2:66539668-66539687 None:intergenic 65.0%
ACGGCGCAAAACGGAGGCGG+CGG - chr1_2:66537948-66537967 Msa0086010:three_prime_UTR 70.0%
GCTGGCGGTGGTTGTGGTGG+TGG + chr1_2:66539650-66539669 None:intergenic 70.0%
!! GGTGCTGGCGGTGGTTGTGG+TGG + chr1_2:66539653-66539672 None:intergenic 70.0%
!! GACAGCTCTGGTGCTGGCGG+TGG + chr1_2:66539662-66539681 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 66537710 66540926 66537710 ID=Msa0086010;Name=Msa0086010
chr1_2 mRNA 66537710 66540926 66537710 ID=Msa0086010-mRNA-1;Parent=Msa0086010;Name=Msa0086010-mRNA-1;_AED=0.02;_eAED=0.02;_QI=175|1|1|1|1|1|2|527|568
chr1_2 exon 66537710 66539674 66537710 ID=Msa0086010-mRNA-1:exon:22478;Parent=Msa0086010-mRNA-1
chr1_2 exon 66540483 66540926 66540483 ID=Msa0086010-mRNA-1:exon:22477;Parent=Msa0086010-mRNA-1
chr1_2 five_prime_UTR 66540752 66540926 66540752 ID=Msa0086010-mRNA-1:five_prime_utr;Parent=Msa0086010-mRNA-1
chr1_2 CDS 66540483 66540751 66540483 ID=Msa0086010-mRNA-1:cds;Parent=Msa0086010-mRNA-1
chr1_2 CDS 66538237 66539674 66538237 ID=Msa0086010-mRNA-1:cds;Parent=Msa0086010-mRNA-1
chr1_2 three_prime_UTR 66537710 66538236 66537710 ID=Msa0086010-mRNA-1:three_prime_utr;Parent=Msa0086010-mRNA-1
Gene Sequence

>Msa0086010

ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTGGCGGATACGGCGCAAAACGGAGGCGGCGGTGAAGAGAAAGGAAGAGAGATTGGTGGTGAGGAAGATGATAAGATGAATATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGAACTTGGCTATCATAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGAAGTGGGAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCTACTTACCATCCAAAACCACAACCAAATAATAACACACTCTCATCACCAACAATAAATCCCAATGAAACCACACAAACAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCGTTTCTCCTTCACCACAACCTAACAACAACAATGTTCCAAATTCTTTGCCAAACATGAACAACCTATTCTCAACCACAACAACTTCAACTTCTTCTTCCACGGCTTCGGACGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAGGCTATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAGCCACCACCACAACCACCGCCAGCACCAGAGCTGTCTCCGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAACAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATATGAATAATGGTTACAAAAGTGGTAATGGTGGTGCTTCTCCTTCTCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCGCCATTGTGGGAAGATATTTCAGCTGCAATGAAGAGACAAGGATACAATAGGAATGCGAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAGAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGCCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAAGTCAAATGAGACGATGGAGCCATTGATGGTGCAGCCAGAACAACAATGGAGACCTCCAACTACATTTGAAGAGGGTGCTGTGGTGAAGAAGAATGTTGATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGAAGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAAGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAGTTGTATGA
Protein sequence

>Msa0086010

MQLGDATVMMETCSGENIVADTAQNGGGGEEKGREIGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSTYHPKPQPNNNTLSSPTINPNETTQTISYVTTTVPSTNPTTFVSPSPQPNNNNVPNSLPNMNNLFSTTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMDRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSPCQTALASQVQTQQLVIPNNNIVEFQNMNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMKSNETMEPLMVQPEQQWRPPTTFEEGAVVKKNVDEAKEEDDNGDVDDEEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTVV*