Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087270 | XP_024625426.1 | 96.154 | 338 | 11 | 2 | 46 | 382 | 1 | 337 | 0.0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087270 | sp|Q9LT89|TCP19_ARATH | 47.305 | 334 | 110 | 11 | 46 | 368 | 1 | 279 | 2.68e-73 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087270 | A0A072VQN8 | 96.154 | 338 | 11 | 2 | 46 | 382 | 1 | 337 | 0.0 | 656 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0087270 | TF | TCP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087270 | MtrunA17_Chr1g0204001 | 96.154 | 338 | 11 | 2 | 46 | 382 | 1 | 337 | 0.0 | 656 |
| Msa0087270 | MtrunA17_Chr8g0350941 | 50.714 | 280 | 103 | 11 | 107 | 374 | 76 | 332 | 4.47e-72 | 228 |
| Msa0087270 | MtrunA17_Chr2g0277361 | 58.475 | 118 | 45 | 1 | 85 | 198 | 101 | 218 | 3.11e-37 | 140 |
| Msa0087270 | MtrunA17_Chr7g0224581 | 71.765 | 85 | 24 | 0 | 103 | 187 | 43 | 127 | 3.04e-36 | 133 |
| Msa0087270 | MtrunA17_Chr4g0060601 | 55.645 | 124 | 44 | 3 | 60 | 172 | 36 | 159 | 7.72e-34 | 130 |
| Msa0087270 | MtrunA17_Chr5g0416581 | 67.059 | 85 | 28 | 0 | 107 | 191 | 64 | 148 | 7.27e-33 | 126 |
| Msa0087270 | MtrunA17_Chr1g0180911 | 82.090 | 67 | 12 | 0 | 106 | 172 | 45 | 111 | 1.20e-32 | 121 |
| Msa0087270 | MtrunA17_Chr1g0164881 | 71.053 | 76 | 22 | 0 | 97 | 172 | 19 | 94 | 2.82e-31 | 119 |
| Msa0087270 | MtrunA17_Chr1g0211941 | 69.136 | 81 | 21 | 1 | 103 | 179 | 26 | 106 | 7.26e-31 | 118 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0087270 | AT5G51910.1 | 47.305 | 334 | 110 | 11 | 46 | 368 | 1 | 279 | 2.72e-74 | 233 |
| Msa0087270 | AT5G51910.2 | 47.305 | 334 | 110 | 11 | 46 | 368 | 1 | 279 | 2.72e-74 | 233 |
| Msa0087270 | AT2G45680.1 | 49.825 | 285 | 122 | 8 | 107 | 374 | 72 | 352 | 4.84e-67 | 216 |
| Msa0087270 | AT1G58100.1 | 71.264 | 87 | 18 | 2 | 107 | 186 | 57 | 143 | 6.73e-34 | 130 |
| Msa0087270 | AT3G27010.2 | 52.667 | 150 | 48 | 7 | 32 | 171 | 3 | 139 | 1.07e-33 | 127 |
| Msa0087270 | AT3G27010.1 | 52.667 | 150 | 48 | 7 | 32 | 171 | 3 | 139 | 1.07e-33 | 127 |
| Msa0087270 | AT1G69690.1 | 81.818 | 66 | 12 | 0 | 107 | 172 | 49 | 114 | 3.88e-33 | 126 |
| Msa0087270 | AT1G72010.1 | 78.261 | 69 | 15 | 0 | 104 | 172 | 57 | 125 | 1.05e-32 | 126 |
| Msa0087270 | AT3G47620.1 | 63.918 | 97 | 20 | 2 | 82 | 172 | 92 | 179 | 2.60e-32 | 127 |
| Msa0087270 | AT1G35560.1 | 68.966 | 87 | 20 | 2 | 107 | 186 | 52 | 138 | 1.22e-31 | 122 |
| Msa0087270 | AT5G23280.1 | 65.909 | 88 | 27 | 1 | 85 | 172 | 17 | 101 | 3.07e-31 | 119 |
| Msa0087270 | AT5G08330.1 | 78.261 | 69 | 15 | 0 | 104 | 172 | 25 | 93 | 8.92e-31 | 118 |
| Msa0087270 | AT5G41030.1 | 60.256 | 78 | 31 | 0 | 98 | 175 | 56 | 133 | 1.95e-27 | 109 |
| Msa0087270 | AT2G37000.1 | 76.667 | 60 | 14 | 0 | 110 | 169 | 43 | 102 | 3.16e-25 | 101 |
| Msa0087270 | AT3G45150.1 | 60.317 | 63 | 25 | 0 | 106 | 168 | 13 | 75 | 3.42e-21 | 90.1 |
| Msa0087270 | AT1G58100.2 | 86.111 | 36 | 5 | 0 | 107 | 142 | 57 | 92 | 1.45e-14 | 75.1 |
Find 109 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCATTAAACTTGAATT+TGG | 0.121922 | 1_2:-68178692 | None:intergenic |
| TAAGAAAGAGTTGCAGTTTA+TGG | 0.151782 | 1_2:+68178967 | Msa0087270:CDS |
| TGACTGTGTTTGAAGCTTTC+AGG | 0.188549 | 1_2:-68177819 | None:intergenic |
| GGGTTGTTCTTCTGCAAATT+TGG | 0.196594 | 1_2:+68178988 | Msa0087270:CDS |
| TGGGGCTCTCCACCATTGTT+AGG | 0.228635 | 1_2:+68177693 | Msa0087270:CDS |
| CCGTATGCTGTTTGAGCAAT+TGG | 0.236628 | 1_2:-68178554 | None:intergenic |
| TTTGAACCGGCATCGGAATA+AGG | 0.270424 | 1_2:-68178160 | None:intergenic |
| GATCAAGTTTCAATGTGTTC+TGG | 0.294475 | 1_2:+68178524 | Msa0087270:CDS |
| TAATGAATCAGCCACAGTTT+TGG | 0.305680 | 1_2:+68178705 | Msa0087270:CDS |
| CCTCGTCAGTTGAAAGATTC+TGG | 0.326356 | 1_2:-68178279 | None:intergenic |
| CGTATGCTGTTTGAGCAATT+GGG | 0.328215 | 1_2:-68178553 | None:intergenic |
| CAACTTAAACTTCAATTTGA+AGG | 0.336529 | 1_2:-68179031 | None:intergenic |
| AAGAAAGAGTTGCAGTTTAT+GGG | 0.351004 | 1_2:+68178968 | Msa0087270:CDS |
| GGTGGTGGTAGTGGTGAAAA+TGG | 0.355388 | 1_2:+68178593 | Msa0087270:CDS |
| AGGGACGTGGTCGGAGAATC+AGG | 0.360591 | 1_2:+68178237 | Msa0087270:CDS |
| GATTCATTAAACTTGAATTT+GGG | 0.361250 | 1_2:-68178691 | None:intergenic |
| AAAACATCATCGCCGCCGTT+AGG | 0.366433 | 1_2:-68178032 | None:intergenic |
| GCAGATACAAAATCAGAAAT+AGG | 0.368459 | 1_2:-68178767 | None:intergenic |
| GTGGTGGTTTAGTTCCATTA+TGG | 0.415083 | 1_2:+68178615 | Msa0087270:CDS |
| GACAACGGAGCCTGCGGCGG+CGG | 0.427457 | 1_2:+68178100 | Msa0087270:CDS |
| TTACTTACAACAGGCCATAA+TGG | 0.429653 | 1_2:-68178629 | None:intergenic |
| GGGGCTCTCCACCATTGTTA+GGG | 0.432076 | 1_2:+68177694 | Msa0087270:CDS |
| TGGTCGGAGAATCAGGATTC+CGG | 0.442503 | 1_2:+68178244 | Msa0087270:CDS |
| TTCCAATGCCTCGTCTACTT+TGG | 0.448144 | 1_2:+68178838 | Msa0087270:CDS |
| ATTCTGGCGGCGCATGTCGC+CGG | 0.450483 | 1_2:-68178263 | None:intergenic |
| AAACATCATCGCCGCCGTTA+GGG | 0.450955 | 1_2:-68178031 | None:intergenic |
| ACCTCCGGTGGTGGTGGTAG+TGG | 0.461112 | 1_2:+68178584 | Msa0087270:CDS |
| GCCACTGTCATCGTTTGAAC+CGG | 0.470202 | 1_2:-68178173 | None:intergenic |
| ATCATCGAAGCTACCGGCAC+TGG | 0.470702 | 1_2:+68178365 | Msa0087270:CDS |
| GCCACCACCTCCGGTGGTGG+TGG | 0.474522 | 1_2:+68178578 | Msa0087270:CDS |
| AACATCATCTCCGGCGAGAC+CGG | 0.479647 | 1_2:+68178436 | Msa0087270:CDS |
| CTACAAATACTCAGATGCTA+AGG | 0.482853 | 1_2:+68178921 | Msa0087270:CDS |
| GGTGCCACCACCTCCGGTGG+TGG | 0.483512 | 1_2:+68178575 | Msa0087270:CDS |
| TGTAGCAGAAGATGAAGAAG+TGG | 0.488254 | 1_2:-68178903 | None:intergenic |
| CTGTTGTAAGTAACGGTGTT+GGG | 0.497781 | 1_2:+68178639 | Msa0087270:CDS |
| TCTTTCATTACCGCCGCCGC+AGG | 0.501320 | 1_2:-68178110 | None:intergenic |
| CCAACACCGTTACTTACAAC+AGG | 0.501497 | 1_2:-68178638 | None:intergenic |
| GCATACGGTGCCACCACCTC+CGG | 0.506126 | 1_2:+68178569 | Msa0087270:CDS |
| GGTGTTGGGTCTAATACAAC+AGG | 0.506356 | 1_2:+68178653 | Msa0087270:CDS |
| ACCGGACGGTGAAGATGCTC+CGG | 0.509905 | 1_2:+68178454 | Msa0087270:CDS |
| GGTAGTGGTGAAAATGGTGG+TGG | 0.510528 | 1_2:+68178599 | Msa0087270:CDS |
| GAAAGAAGAGCTAACGGAAA+CGG | 0.511043 | 1_2:+68178127 | Msa0087270:CDS |
| TTCACCACTACCACCACCAC+CGG | 0.511362 | 1_2:-68178588 | None:intergenic |
| TTTCAACTGACGAGGGAGCT+AGG | 0.517084 | 1_2:+68178287 | Msa0087270:CDS |
| GTCCCTCCACCTTCGTGTGA+CGG | 0.518085 | 1_2:-68178220 | None:intergenic |
| AGCCAAAGTAGACGAGGCAT+TGG | 0.518772 | 1_2:-68178840 | None:intergenic |
| ACCGGAGCATCTTCACCGTC+CGG | 0.521868 | 1_2:-68178455 | None:intergenic |
| CCGGTAGCTTCGATGATAGA+AGG | 0.522884 | 1_2:-68178359 | None:intergenic |
| CAATTTGAAGGATTTGAAGA+GGG | 0.523447 | 1_2:-68179019 | None:intergenic |
| CCAATTGCTCAAACAGCATA+CGG | 0.523616 | 1_2:+68178554 | Msa0087270:CDS |
| ACCACCACCACCGGAGGTGG+TGG | 0.527488 | 1_2:-68178579 | None:intergenic |
| GGTGGTAGTGGTGAAAATGG+TGG | 0.530669 | 1_2:+68178596 | Msa0087270:CDS |
| CAGCTTGTTCTAGTAACCAC+CGG | 0.530941 | 1_2:-68178334 | None:intergenic |
| CCTTCTATCATCGAAGCTAC+CGG | 0.531231 | 1_2:+68178359 | Msa0087270:CDS |
| GTCATCGTTTGAACCGGCAT+CGG | 0.531689 | 1_2:-68178167 | None:intergenic |
| CAACAGCCTTATTCCGATGC+CGG | 0.533446 | 1_2:+68178154 | Msa0087270:CDS |
| GGCCGGCACAGTTCCAGTGC+CGG | 0.539294 | 1_2:-68178378 | None:intergenic |
| TAAGCAGTAGAAGCATTTGA+AGG | 0.540001 | 1_2:-68178809 | None:intergenic |
| CACACGAAGGTGGAGGGACG+TGG | 0.552204 | 1_2:+68178224 | Msa0087270:CDS |
| GAAGATTCCAACATCATCTC+CGG | 0.553576 | 1_2:+68178427 | Msa0087270:CDS |
| AGTATCTCCGTCGGAGACAA+CGG | 0.553999 | 1_2:+68178085 | Msa0087270:CDS |
| ACTACCACCACCACCGGAGG+TGG | 0.554618 | 1_2:-68178582 | None:intergenic |
| TCAATTTGAAGGATTTGAAG+AGG | 0.556225 | 1_2:-68179020 | None:intergenic |
| AGACCGTCACACGAAGGTGG+AGG | 0.559373 | 1_2:+68178217 | Msa0087270:CDS |
| CCGGCCATCGCTGTTTCCGT+CGG | 0.560469 | 1_2:+68178395 | Msa0087270:CDS |
| GCCATCGCTGTTTCCGTCGG+AGG | 0.562359 | 1_2:+68178398 | Msa0087270:CDS |
| CCACCGGATTGTTTCTCCGT+CGG | 0.564902 | 1_2:-68178318 | None:intergenic |
| CCGACGGAAACAGCGATGGC+CGG | 0.568312 | 1_2:-68178395 | None:intergenic |
| CCAGAATCTTTCAACTGACG+AGG | 0.568890 | 1_2:+68178279 | Msa0087270:CDS |
| CCTGTTGTAAGTAACGGTGT+TGG | 0.571104 | 1_2:+68178638 | Msa0087270:CDS |
| TCAAACGATGACAGTGGCGG+CGG | 0.571801 | 1_2:+68178178 | Msa0087270:CDS |
| GCAGGCTCCGTTGTCTCCGA+CGG | 0.573037 | 1_2:-68178092 | None:intergenic |
| TCTTCACCGTCCGGTCTCGC+CGG | 0.573077 | 1_2:-68178446 | None:intergenic |
| GAAGCATTTGAAGGTTCTTG+TGG | 0.573567 | 1_2:-68178800 | None:intergenic |
| TACAAATACTCAGATGCTAA+GGG | 0.585086 | 1_2:+68178922 | Msa0087270:CDS |
| GAAAGACCGTCACACGAAGG+TGG | 0.585783 | 1_2:+68178214 | Msa0087270:CDS |
| GAAGTTGCTGAACTGAAACT+AGG | 0.587727 | 1_2:-68178863 | None:intergenic |
| TACCGGCACTGGAACTGTGC+CGG | 0.588215 | 1_2:+68178376 | Msa0087270:CDS |
| GTATGCTGTTTGAGCAATTG+GGG | 0.588581 | 1_2:-68178552 | None:intergenic |
| AATCCGACGGAGAAACAATC+CGG | 0.589954 | 1_2:+68178315 | Msa0087270:CDS |
| GGAGACAACGGAGCCTGCGG+CGG | 0.591612 | 1_2:+68178097 | Msa0087270:CDS |
| GTCGGAGACAACGGAGCCTG+CGG | 0.596750 | 1_2:+68178094 | Msa0087270:CDS |
| TTATGGCCTGTTGTAAGTAA+CGG | 0.597870 | 1_2:+68178632 | Msa0087270:CDS |
| GGTCTCGCCGGAGATGATGT+TGG | 0.599874 | 1_2:-68178434 | None:intergenic |
| TGACAGTGGCGGCGGCGAAG+AGG | 0.607175 | 1_2:+68178186 | Msa0087270:CDS |
| GACCGTCACACGAAGGTGGA+GGG | 0.613473 | 1_2:+68178218 | Msa0087270:CDS |
| ACCTCCGACGGAAACAGCGA+TGG | 0.615156 | 1_2:-68178399 | None:intergenic |
| CGAAGGTGGAGGGACGTGGT+CGG | 0.617193 | 1_2:+68178228 | Msa0087270:CDS |
| TCATCTCCGGCGAGACCGGA+CGG | 0.619808 | 1_2:+68178440 | Msa0087270:CDS |
| CTGTTTACAAAACACGAAGT+AGG | 0.621865 | 1_2:+68177856 | Msa0087270:CDS |
| CTCTTCCACACGGATATGTG+GGG | 0.621943 | 1_2:+68177675 | None:intergenic |
| TACGGTGCCACCACCTCCGG+TGG | 0.622609 | 1_2:+68178572 | Msa0087270:CDS |
| ATAACAAACCCTAACAATGG+TGG | 0.638466 | 1_2:-68177702 | None:intergenic |
| CAATACTGAAGTATCTCCGT+CGG | 0.638733 | 1_2:+68178076 | Msa0087270:CDS |
| GAAATAACAAACCCTAACAA+TGG | 0.639443 | 1_2:-68177705 | None:intergenic |
| AGGATGGAAGTGAACCCTAA+CGG | 0.640403 | 1_2:+68178017 | Msa0087270:intron |
| CAGAATCTTTCAACTGACGA+GGG | 0.645062 | 1_2:+68178280 | Msa0087270:CDS |
| GGTAATGAAAGAAGAGCTAA+CGG | 0.657643 | 1_2:+68178121 | Msa0087270:CDS |
| GAGCTAGGTCACAAATCCGA+CGG | 0.657749 | 1_2:+68178302 | Msa0087270:CDS |
| ACCACTACCACCACCACCGG+AGG | 0.661408 | 1_2:-68178585 | None:intergenic |
| AATCTTCAACGTACCTCCGA+CGG | 0.665588 | 1_2:-68178411 | None:intergenic |
| GGTTCAAACGATGACAGTGG+CGG | 0.668294 | 1_2:+68178175 | Msa0087270:CDS |
| CGTCAGTTGAAAGATTCTGG+CGG | 0.698563 | 1_2:-68178276 | None:intergenic |
| ATCGAAAGACCGTCACACGA+AGG | 0.699940 | 1_2:+68178211 | Msa0087270:CDS |
| ACTAGGAGCCAAAGTAGACG+AGG | 0.700217 | 1_2:-68178846 | None:intergenic |
| GCCGGTTCAAACGATGACAG+TGG | 0.712883 | 1_2:+68178172 | Msa0087270:CDS |
| GCAGGAATAGCCCAAAACTG+TGG | 0.725268 | 1_2:-68178716 | None:intergenic |
| CCGACGGAGAAACAATCCGG+TGG | 0.744089 | 1_2:+68178318 | Msa0087270:CDS |
| ATGGAAGTGAACCCTAACGG+CGG | 0.769753 | 1_2:+68178020 | Msa0087270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATCAATTTTTTTG+GGG | - | chr1_2:68177882-68177901 | None:intergenic | 10.0% |
| !!! | GAAAAAAAATCAATTTTTTT+GGG | - | chr1_2:68177883-68177902 | None:intergenic | 10.0% |
| !!! | AGAAAAAAAATCAATTTTTT+TGG | - | chr1_2:68177884-68177903 | None:intergenic | 10.0% |
| !!! | TTATTTGTTAATTTTTGTTT+AGG | + | chr1_2:68177997-68178016 | Msa0087270:intron | 10.0% |
| !!! | AAAAAAAATCAATTTTTTTG+GGG | - | chr1_2:68177882-68177901 | None:intergenic | 10.0% |
| !!! | GAAAAAAAATCAATTTTTTT+GGG | - | chr1_2:68177883-68177902 | None:intergenic | 10.0% |
| !!! | AGAAAAAAAATCAATTTTTT+TGG | - | chr1_2:68177884-68177903 | None:intergenic | 10.0% |
| !!! | TTATTTGTTAATTTTTGTTT+AGG | + | chr1_2:68177997-68178016 | Msa0087270:intron | 10.0% |
| !!! | TTGTTAATTTTTGTTTAGGA+TGG | + | chr1_2:68178001-68178020 | Msa0087270:intron | 20.0% |
| !! | GATTCATTAAACTTGAATTT+GGG | - | chr1_2:68178694-68178713 | None:intergenic | 20.0% |
| !! | TGATTCATTAAACTTGAATT+TGG | - | chr1_2:68178695-68178714 | None:intergenic | 20.0% |
| !!! | TTGTTAATTTTTGTTTAGGA+TGG | + | chr1_2:68178001-68178020 | Msa0087270:intron | 20.0% |
| !! | GATTCATTAAACTTGAATTT+GGG | - | chr1_2:68178694-68178713 | None:intergenic | 20.0% |
| !! | TGATTCATTAAACTTGAATT+TGG | - | chr1_2:68178695-68178714 | None:intergenic | 20.0% |
| !!! | TCTTTTTCGTTTTTTTCATC+TGG | + | chr1_2:68177933-68177952 | Msa0087270:intron | 25.0% |
| !!! | CTTTTTCGTTTTTTTCATCT+GGG | + | chr1_2:68177934-68177953 | Msa0087270:intron | 25.0% |
| !!! | GGTTTTGATCATTCTTTAAT+GGG | + | chr1_2:68177955-68177974 | Msa0087270:intron | 25.0% |
| !!! | TCTTTTTCGTTTTTTTCATC+TGG | + | chr1_2:68177933-68177952 | Msa0087270:intron | 25.0% |
| !!! | CTTTTTCGTTTTTTTCATCT+GGG | + | chr1_2:68177934-68177953 | Msa0087270:intron | 25.0% |
| !!! | GGTTTTGATCATTCTTTAAT+GGG | + | chr1_2:68177955-68177974 | Msa0087270:intron | 25.0% |
| GAAATAACAAACCCTAACAA+TGG | - | chr1_2:68177708-68177727 | None:intergenic | 30.0% | |
| !! | GGGTTTTGATCATTCTTTAA+TGG | + | chr1_2:68177954-68177973 | Msa0087270:intron | 30.0% |
| GAATTTGGGAACATGAAAAA+TGG | - | chr1_2:68178680-68178699 | None:intergenic | 30.0% | |
| CTTGTTTGCACATTGAAAAA+TGG | - | chr1_2:68178746-68178765 | None:intergenic | 30.0% | |
| GCAGATACAAAATCAGAAAT+AGG | - | chr1_2:68178770-68178789 | None:intergenic | 30.0% | |
| TACAAATACTCAGATGCTAA+GGG | + | chr1_2:68178922-68178941 | Msa0087270:CDS | 30.0% | |
| TAAGAAAGAGTTGCAGTTTA+TGG | + | chr1_2:68178967-68178986 | Msa0087270:CDS | 30.0% | |
| AAGAAAGAGTTGCAGTTTAT+GGG | + | chr1_2:68178968-68178987 | Msa0087270:CDS | 30.0% | |
| CAATTTGAAGGATTTGAAGA+GGG | - | chr1_2:68179022-68179041 | None:intergenic | 30.0% | |
| TCAATTTGAAGGATTTGAAG+AGG | - | chr1_2:68179023-68179042 | None:intergenic | 30.0% | |
| GAAATAACAAACCCTAACAA+TGG | - | chr1_2:68177708-68177727 | None:intergenic | 30.0% | |
| !! | GGGTTTTGATCATTCTTTAA+TGG | + | chr1_2:68177954-68177973 | Msa0087270:intron | 30.0% |
| GAATTTGGGAACATGAAAAA+TGG | - | chr1_2:68178680-68178699 | None:intergenic | 30.0% | |
| CTTGTTTGCACATTGAAAAA+TGG | - | chr1_2:68178746-68178765 | None:intergenic | 30.0% | |
| GCAGATACAAAATCAGAAAT+AGG | - | chr1_2:68178770-68178789 | None:intergenic | 30.0% | |
| TACAAATACTCAGATGCTAA+GGG | + | chr1_2:68178922-68178941 | Msa0087270:CDS | 30.0% | |
| TAAGAAAGAGTTGCAGTTTA+TGG | + | chr1_2:68178967-68178986 | Msa0087270:CDS | 30.0% | |
| AAGAAAGAGTTGCAGTTTAT+GGG | + | chr1_2:68178968-68178987 | Msa0087270:CDS | 30.0% | |
| CAATTTGAAGGATTTGAAGA+GGG | - | chr1_2:68179022-68179041 | None:intergenic | 30.0% | |
| TCAATTTGAAGGATTTGAAG+AGG | - | chr1_2:68179023-68179042 | None:intergenic | 30.0% | |
| ATAACAAACCCTAACAATGG+TGG | - | chr1_2:68177705-68177724 | None:intergenic | 35.0% | |
| GACTAATTGAGAAATCGAAG+AGG | - | chr1_2:68177780-68177799 | None:intergenic | 35.0% | |
| CTGTTTACAAAACACGAAGT+AGG | + | chr1_2:68177856-68177875 | Msa0087270:CDS | 35.0% | |
| GGTAATGAAAGAAGAGCTAA+CGG | + | chr1_2:68178121-68178140 | Msa0087270:CDS | 35.0% | |
| GATCAAGTTTCAATGTGTTC+TGG | + | chr1_2:68178524-68178543 | Msa0087270:CDS | 35.0% | |
| TTACTTACAACAGGCCATAA+TGG | - | chr1_2:68178632-68178651 | None:intergenic | 35.0% | |
| TTATGGCCTGTTGTAAGTAA+CGG | + | chr1_2:68178632-68178651 | Msa0087270:CDS | 35.0% | |
| ! | TAATGAATCAGCCACAGTTT+TGG | + | chr1_2:68178705-68178724 | Msa0087270:CDS | 35.0% |
| ! | AATGAATCAGCCACAGTTTT+GGG | + | chr1_2:68178706-68178725 | Msa0087270:CDS | 35.0% |
| !! | TAAGCAGTAGAAGCATTTGA+AGG | - | chr1_2:68178812-68178831 | None:intergenic | 35.0% |
| CTACAAATACTCAGATGCTA+AGG | + | chr1_2:68178921-68178940 | Msa0087270:CDS | 35.0% | |
| ! | GATGCTAAGGGATTTTTCTT+TGG | + | chr1_2:68178934-68178953 | Msa0087270:CDS | 35.0% |
| ATAACAAACCCTAACAATGG+TGG | - | chr1_2:68177705-68177724 | None:intergenic | 35.0% | |
| GACTAATTGAGAAATCGAAG+AGG | - | chr1_2:68177780-68177799 | None:intergenic | 35.0% | |
| CTGTTTACAAAACACGAAGT+AGG | + | chr1_2:68177856-68177875 | Msa0087270:CDS | 35.0% | |
| GGTAATGAAAGAAGAGCTAA+CGG | + | chr1_2:68178121-68178140 | Msa0087270:CDS | 35.0% | |
| GATCAAGTTTCAATGTGTTC+TGG | + | chr1_2:68178524-68178543 | Msa0087270:CDS | 35.0% | |
| TTACTTACAACAGGCCATAA+TGG | - | chr1_2:68178632-68178651 | None:intergenic | 35.0% | |
| TTATGGCCTGTTGTAAGTAA+CGG | + | chr1_2:68178632-68178651 | Msa0087270:CDS | 35.0% | |
| ! | TAATGAATCAGCCACAGTTT+TGG | + | chr1_2:68178705-68178724 | Msa0087270:CDS | 35.0% |
| ! | AATGAATCAGCCACAGTTTT+GGG | + | chr1_2:68178706-68178725 | Msa0087270:CDS | 35.0% |
| !! | TAAGCAGTAGAAGCATTTGA+AGG | - | chr1_2:68178812-68178831 | None:intergenic | 35.0% |
| CTACAAATACTCAGATGCTA+AGG | + | chr1_2:68178921-68178940 | Msa0087270:CDS | 35.0% | |
| ! | GATGCTAAGGGATTTTTCTT+TGG | + | chr1_2:68178934-68178953 | Msa0087270:CDS | 35.0% |
| ! | TGACTGTGTTTGAAGCTTTC+AGG | - | chr1_2:68177822-68177841 | None:intergenic | 40.0% |
| ! | CAATACTGAAGTATCTCCGT+CGG | + | chr1_2:68178076-68178095 | Msa0087270:CDS | 40.0% |
| GAAAGAAGAGCTAACGGAAA+CGG | + | chr1_2:68178127-68178146 | Msa0087270:CDS | 40.0% | |
| CAGAATCTTTCAACTGACGA+GGG | + | chr1_2:68178280-68178299 | Msa0087270:CDS | 40.0% | |
| GAAGATTCCAACATCATCTC+CGG | + | chr1_2:68178427-68178446 | Msa0087270:CDS | 40.0% | |
| ! | GCTCTTCTTCTTCTTTTCAC+CGG | - | chr1_2:68178476-68178495 | None:intergenic | 40.0% |
| ! | GTATGCTGTTTGAGCAATTG+GGG | - | chr1_2:68178555-68178574 | None:intergenic | 40.0% |
| ! | CGTATGCTGTTTGAGCAATT+GGG | - | chr1_2:68178556-68178575 | None:intergenic | 40.0% |
| CCAATTGCTCAAACAGCATA+CGG | + | chr1_2:68178554-68178573 | Msa0087270:CDS | 40.0% | |
| ! | GTGGTGGTTTAGTTCCATTA+TGG | + | chr1_2:68178615-68178634 | Msa0087270:CDS | 40.0% |
| CTGTTGTAAGTAACGGTGTT+GGG | + | chr1_2:68178639-68178658 | Msa0087270:CDS | 40.0% | |
| !! | ACATTGAAAAATGGTGCTGC+AGG | - | chr1_2:68178737-68178756 | None:intergenic | 40.0% |
| ! | GAAGCATTTGAAGGTTCTTG+TGG | - | chr1_2:68178803-68178822 | None:intergenic | 40.0% |
| GAAGTTGCTGAACTGAAACT+AGG | - | chr1_2:68178866-68178885 | None:intergenic | 40.0% | |
| TGTAGCAGAAGATGAAGAAG+TGG | - | chr1_2:68178906-68178925 | None:intergenic | 40.0% | |
| GGGTTGTTCTTCTGCAAATT+TGG | + | chr1_2:68178988-68179007 | Msa0087270:CDS | 40.0% | |
| ! | TGACTGTGTTTGAAGCTTTC+AGG | - | chr1_2:68177822-68177841 | None:intergenic | 40.0% |
| ! | CAATACTGAAGTATCTCCGT+CGG | + | chr1_2:68178076-68178095 | Msa0087270:CDS | 40.0% |
| GAAAGAAGAGCTAACGGAAA+CGG | + | chr1_2:68178127-68178146 | Msa0087270:CDS | 40.0% | |
| CAGAATCTTTCAACTGACGA+GGG | + | chr1_2:68178280-68178299 | Msa0087270:CDS | 40.0% | |
| GAAGATTCCAACATCATCTC+CGG | + | chr1_2:68178427-68178446 | Msa0087270:CDS | 40.0% | |
| ! | GCTCTTCTTCTTCTTTTCAC+CGG | - | chr1_2:68178476-68178495 | None:intergenic | 40.0% |
| ! | GTATGCTGTTTGAGCAATTG+GGG | - | chr1_2:68178555-68178574 | None:intergenic | 40.0% |
| ! | CGTATGCTGTTTGAGCAATT+GGG | - | chr1_2:68178556-68178575 | None:intergenic | 40.0% |
| CCAATTGCTCAAACAGCATA+CGG | + | chr1_2:68178554-68178573 | Msa0087270:CDS | 40.0% | |
| ! | GTGGTGGTTTAGTTCCATTA+TGG | + | chr1_2:68178615-68178634 | Msa0087270:CDS | 40.0% |
| CTGTTGTAAGTAACGGTGTT+GGG | + | chr1_2:68178639-68178658 | Msa0087270:CDS | 40.0% | |
| !! | ACATTGAAAAATGGTGCTGC+AGG | - | chr1_2:68178737-68178756 | None:intergenic | 40.0% |
| ! | GAAGCATTTGAAGGTTCTTG+TGG | - | chr1_2:68178803-68178822 | None:intergenic | 40.0% |
| GAAGTTGCTGAACTGAAACT+AGG | - | chr1_2:68178866-68178885 | None:intergenic | 40.0% | |
| TGTAGCAGAAGATGAAGAAG+TGG | - | chr1_2:68178906-68178925 | None:intergenic | 40.0% | |
| GGGTTGTTCTTCTGCAAATT+TGG | + | chr1_2:68178988-68179007 | Msa0087270:CDS | 40.0% | |
| AGGATGGAAGTGAACCCTAA+CGG | + | chr1_2:68178017-68178036 | Msa0087270:intron | 45.0% | |
| ! | TTTGAACCGGCATCGGAATA+AGG | - | chr1_2:68178163-68178182 | None:intergenic | 45.0% |
| CGTCAGTTGAAAGATTCTGG+CGG | - | chr1_2:68178279-68178298 | None:intergenic | 45.0% | |
| CCTCGTCAGTTGAAAGATTC+TGG | - | chr1_2:68178282-68178301 | None:intergenic | 45.0% | |
| CCAGAATCTTTCAACTGACG+AGG | + | chr1_2:68178279-68178298 | Msa0087270:CDS | 45.0% | |
| AATCCGACGGAGAAACAATC+CGG | + | chr1_2:68178315-68178334 | Msa0087270:CDS | 45.0% | |
| ! | CAGCTTGTTCTAGTAACCAC+CGG | - | chr1_2:68178337-68178356 | None:intergenic | 45.0% |
| CCTTCTATCATCGAAGCTAC+CGG | + | chr1_2:68178359-68178378 | Msa0087270:CDS | 45.0% | |
| AATCTTCAACGTACCTCCGA+CGG | - | chr1_2:68178414-68178433 | None:intergenic | 45.0% | |
| ! | CCGTATGCTGTTTGAGCAAT+TGG | - | chr1_2:68178557-68178576 | None:intergenic | 45.0% |
| CCAACACCGTTACTTACAAC+AGG | - | chr1_2:68178641-68178660 | None:intergenic | 45.0% | |
| CCTGTTGTAAGTAACGGTGT+TGG | + | chr1_2:68178638-68178657 | Msa0087270:CDS | 45.0% | |
| ! | GGTGTTGGGTCTAATACAAC+AGG | + | chr1_2:68178653-68178672 | Msa0087270:CDS | 45.0% |
| TTCCAATGCCTCGTCTACTT+TGG | + | chr1_2:68178838-68178857 | Msa0087270:CDS | 45.0% | |
| AGGATGGAAGTGAACCCTAA+CGG | + | chr1_2:68178017-68178036 | Msa0087270:intron | 45.0% | |
| ! | TTTGAACCGGCATCGGAATA+AGG | - | chr1_2:68178163-68178182 | None:intergenic | 45.0% |
| CGTCAGTTGAAAGATTCTGG+CGG | - | chr1_2:68178279-68178298 | None:intergenic | 45.0% | |
| CCTCGTCAGTTGAAAGATTC+TGG | - | chr1_2:68178282-68178301 | None:intergenic | 45.0% | |
| CCAGAATCTTTCAACTGACG+AGG | + | chr1_2:68178279-68178298 | Msa0087270:CDS | 45.0% | |
| AATCCGACGGAGAAACAATC+CGG | + | chr1_2:68178315-68178334 | Msa0087270:CDS | 45.0% | |
| ! | CAGCTTGTTCTAGTAACCAC+CGG | - | chr1_2:68178337-68178356 | None:intergenic | 45.0% |
| CCTTCTATCATCGAAGCTAC+CGG | + | chr1_2:68178359-68178378 | Msa0087270:CDS | 45.0% | |
| AATCTTCAACGTACCTCCGA+CGG | - | chr1_2:68178414-68178433 | None:intergenic | 45.0% | |
| ! | CCGTATGCTGTTTGAGCAAT+TGG | - | chr1_2:68178557-68178576 | None:intergenic | 45.0% |
| CCAACACCGTTACTTACAAC+AGG | - | chr1_2:68178641-68178660 | None:intergenic | 45.0% | |
| CCTGTTGTAAGTAACGGTGT+TGG | + | chr1_2:68178638-68178657 | Msa0087270:CDS | 45.0% | |
| ! | GGTGTTGGGTCTAATACAAC+AGG | + | chr1_2:68178653-68178672 | Msa0087270:CDS | 45.0% |
| TTCCAATGCCTCGTCTACTT+TGG | + | chr1_2:68178838-68178857 | Msa0087270:CDS | 45.0% | |
| ATGGAAGTGAACCCTAACGG+CGG | + | chr1_2:68178020-68178039 | Msa0087270:CDS | 50.0% | |
| AAACATCATCGCCGCCGTTA+GGG | - | chr1_2:68178034-68178053 | None:intergenic | 50.0% | |
| AAAACATCATCGCCGCCGTT+AGG | - | chr1_2:68178035-68178054 | None:intergenic | 50.0% | |
| AGTATCTCCGTCGGAGACAA+CGG | + | chr1_2:68178085-68178104 | Msa0087270:CDS | 50.0% | |
| !! | CAACAGCCTTATTCCGATGC+CGG | + | chr1_2:68178154-68178173 | Msa0087270:CDS | 50.0% |
| GTCATCGTTTGAACCGGCAT+CGG | - | chr1_2:68178170-68178189 | None:intergenic | 50.0% | |
| GCCACTGTCATCGTTTGAAC+CGG | - | chr1_2:68178176-68178195 | None:intergenic | 50.0% | |
| GGTTCAAACGATGACAGTGG+CGG | + | chr1_2:68178175-68178194 | Msa0087270:CDS | 50.0% | |
| ATCGAAAGACCGTCACACGA+AGG | + | chr1_2:68178211-68178230 | Msa0087270:CDS | 50.0% | |
| TGGTCGGAGAATCAGGATTC+CGG | + | chr1_2:68178244-68178263 | Msa0087270:CDS | 50.0% | |
| TTTCAACTGACGAGGGAGCT+AGG | + | chr1_2:68178287-68178306 | Msa0087270:CDS | 50.0% | |
| GAGCTAGGTCACAAATCCGA+CGG | + | chr1_2:68178302-68178321 | Msa0087270:CDS | 50.0% | |
| CCGGTAGCTTCGATGATAGA+AGG | - | chr1_2:68178362-68178381 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTAGTGGTGAAAA+TGG | + | chr1_2:68178593-68178612 | Msa0087270:CDS | 50.0% |
| !! | GGTGGTAGTGGTGAAAATGG+TGG | + | chr1_2:68178596-68178615 | Msa0087270:CDS | 50.0% |
| ! | GGTAGTGGTGAAAATGGTGG+TGG | + | chr1_2:68178599-68178618 | Msa0087270:CDS | 50.0% |
| GCAGGAATAGCCCAAAACTG+TGG | - | chr1_2:68178719-68178738 | None:intergenic | 50.0% | |
| AGCCAAAGTAGACGAGGCAT+TGG | - | chr1_2:68178843-68178862 | None:intergenic | 50.0% | |
| ACTAGGAGCCAAAGTAGACG+AGG | - | chr1_2:68178849-68178868 | None:intergenic | 50.0% | |
| ATGGAAGTGAACCCTAACGG+CGG | + | chr1_2:68178020-68178039 | Msa0087270:CDS | 50.0% | |
| AAACATCATCGCCGCCGTTA+GGG | - | chr1_2:68178034-68178053 | None:intergenic | 50.0% | |
| AAAACATCATCGCCGCCGTT+AGG | - | chr1_2:68178035-68178054 | None:intergenic | 50.0% | |
| AGTATCTCCGTCGGAGACAA+CGG | + | chr1_2:68178085-68178104 | Msa0087270:CDS | 50.0% | |
| !! | CAACAGCCTTATTCCGATGC+CGG | + | chr1_2:68178154-68178173 | Msa0087270:CDS | 50.0% |
| GTCATCGTTTGAACCGGCAT+CGG | - | chr1_2:68178170-68178189 | None:intergenic | 50.0% | |
| GCCACTGTCATCGTTTGAAC+CGG | - | chr1_2:68178176-68178195 | None:intergenic | 50.0% | |
| GGTTCAAACGATGACAGTGG+CGG | + | chr1_2:68178175-68178194 | Msa0087270:CDS | 50.0% | |
| ATCGAAAGACCGTCACACGA+AGG | + | chr1_2:68178211-68178230 | Msa0087270:CDS | 50.0% | |
| TGGTCGGAGAATCAGGATTC+CGG | + | chr1_2:68178244-68178263 | Msa0087270:CDS | 50.0% | |
| TTTCAACTGACGAGGGAGCT+AGG | + | chr1_2:68178287-68178306 | Msa0087270:CDS | 50.0% | |
| GAGCTAGGTCACAAATCCGA+CGG | + | chr1_2:68178302-68178321 | Msa0087270:CDS | 50.0% | |
| CCGGTAGCTTCGATGATAGA+AGG | - | chr1_2:68178362-68178381 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTAGTGGTGAAAA+TGG | + | chr1_2:68178593-68178612 | Msa0087270:CDS | 50.0% |
| !! | GGTGGTAGTGGTGAAAATGG+TGG | + | chr1_2:68178596-68178615 | Msa0087270:CDS | 50.0% |
| ! | GGTAGTGGTGAAAATGGTGG+TGG | + | chr1_2:68178599-68178618 | Msa0087270:CDS | 50.0% |
| GCAGGAATAGCCCAAAACTG+TGG | - | chr1_2:68178719-68178738 | None:intergenic | 50.0% | |
| AGCCAAAGTAGACGAGGCAT+TGG | - | chr1_2:68178843-68178862 | None:intergenic | 50.0% | |
| ACTAGGAGCCAAAGTAGACG+AGG | - | chr1_2:68178849-68178868 | None:intergenic | 50.0% | |
| TGGGGCTCTCCACCATTGTT+AGG | + | chr1_2:68177693-68177712 | Msa0087270:CDS | 55.0% | |
| GGGGCTCTCCACCATTGTTA+GGG | + | chr1_2:68177694-68177713 | Msa0087270:CDS | 55.0% | |
| ! | GCCGGTTCAAACGATGACAG+TGG | + | chr1_2:68178172-68178191 | Msa0087270:CDS | 55.0% |
| TCAAACGATGACAGTGGCGG+CGG | + | chr1_2:68178178-68178197 | Msa0087270:CDS | 55.0% | |
| GAAAGACCGTCACACGAAGG+TGG | + | chr1_2:68178214-68178233 | Msa0087270:CDS | 55.0% | |
| ! | CCACCGGATTGTTTCTCCGT+CGG | - | chr1_2:68178321-68178340 | None:intergenic | 55.0% |
| ATCATCGAAGCTACCGGCAC+TGG | + | chr1_2:68178365-68178384 | Msa0087270:CDS | 55.0% | |
| AACATCATCTCCGGCGAGAC+CGG | + | chr1_2:68178436-68178455 | Msa0087270:CDS | 55.0% | |
| TTCACCACTACCACCACCAC+CGG | - | chr1_2:68178591-68178610 | None:intergenic | 55.0% | |
| TGGGGCTCTCCACCATTGTT+AGG | + | chr1_2:68177693-68177712 | Msa0087270:CDS | 55.0% | |
| GGGGCTCTCCACCATTGTTA+GGG | + | chr1_2:68177694-68177713 | Msa0087270:CDS | 55.0% | |
| ! | GCCGGTTCAAACGATGACAG+TGG | + | chr1_2:68178172-68178191 | Msa0087270:CDS | 55.0% |
| TCAAACGATGACAGTGGCGG+CGG | + | chr1_2:68178178-68178197 | Msa0087270:CDS | 55.0% | |
| GAAAGACCGTCACACGAAGG+TGG | + | chr1_2:68178214-68178233 | Msa0087270:CDS | 55.0% | |
| ! | CCACCGGATTGTTTCTCCGT+CGG | - | chr1_2:68178321-68178340 | None:intergenic | 55.0% |
| ATCATCGAAGCTACCGGCAC+TGG | + | chr1_2:68178365-68178384 | Msa0087270:CDS | 55.0% | |
| AACATCATCTCCGGCGAGAC+CGG | + | chr1_2:68178436-68178455 | Msa0087270:CDS | 55.0% | |
| TTCACCACTACCACCACCAC+CGG | - | chr1_2:68178591-68178610 | None:intergenic | 55.0% | |
| TCTTTCATTACCGCCGCCGC+AGG | - | chr1_2:68178113-68178132 | None:intergenic | 60.0% | |
| AGACCGTCACACGAAGGTGG+AGG | + | chr1_2:68178217-68178236 | Msa0087270:CDS | 60.0% | |
| GACCGTCACACGAAGGTGGA+GGG | + | chr1_2:68178218-68178237 | Msa0087270:CDS | 60.0% | |
| GTCCCTCCACCTTCGTGTGA+CGG | - | chr1_2:68178223-68178242 | None:intergenic | 60.0% | |
| AGGGACGTGGTCGGAGAATC+AGG | + | chr1_2:68178237-68178256 | Msa0087270:CDS | 60.0% | |
| CCGACGGAGAAACAATCCGG+TGG | + | chr1_2:68178318-68178337 | Msa0087270:CDS | 60.0% | |
| ! | TACCGGCACTGGAACTGTGC+CGG | + | chr1_2:68178376-68178395 | Msa0087270:CDS | 60.0% |
| ACCTCCGACGGAAACAGCGA+TGG | - | chr1_2:68178402-68178421 | None:intergenic | 60.0% | |
| GGTCTCGCCGGAGATGATGT+TGG | - | chr1_2:68178437-68178456 | None:intergenic | 60.0% | |
| ACCGGACGGTGAAGATGCTC+CGG | + | chr1_2:68178454-68178473 | Msa0087270:CDS | 60.0% | |
| ! | ACCGGAGCATCTTCACCGTC+CGG | - | chr1_2:68178458-68178477 | None:intergenic | 60.0% |
| TCTTTCATTACCGCCGCCGC+AGG | - | chr1_2:68178113-68178132 | None:intergenic | 60.0% | |
| AGACCGTCACACGAAGGTGG+AGG | + | chr1_2:68178217-68178236 | Msa0087270:CDS | 60.0% | |
| GACCGTCACACGAAGGTGGA+GGG | + | chr1_2:68178218-68178237 | Msa0087270:CDS | 60.0% | |
| GTCCCTCCACCTTCGTGTGA+CGG | - | chr1_2:68178223-68178242 | None:intergenic | 60.0% | |
| AGGGACGTGGTCGGAGAATC+AGG | + | chr1_2:68178237-68178256 | Msa0087270:CDS | 60.0% | |
| CCGACGGAGAAACAATCCGG+TGG | + | chr1_2:68178318-68178337 | Msa0087270:CDS | 60.0% | |
| ! | TACCGGCACTGGAACTGTGC+CGG | + | chr1_2:68178376-68178395 | Msa0087270:CDS | 60.0% |
| ACCTCCGACGGAAACAGCGA+TGG | - | chr1_2:68178402-68178421 | None:intergenic | 60.0% | |
| GGTCTCGCCGGAGATGATGT+TGG | - | chr1_2:68178437-68178456 | None:intergenic | 60.0% | |
| ACCGGACGGTGAAGATGCTC+CGG | + | chr1_2:68178454-68178473 | Msa0087270:CDS | 60.0% | |
| ! | ACCGGAGCATCTTCACCGTC+CGG | - | chr1_2:68178458-68178477 | None:intergenic | 60.0% |
| GCAGGCTCCGTTGTCTCCGA+CGG | - | chr1_2:68178095-68178114 | None:intergenic | 65.0% | |
| GTCGGAGACAACGGAGCCTG+CGG | + | chr1_2:68178094-68178113 | Msa0087270:CDS | 65.0% | |
| CACACGAAGGTGGAGGGACG+TGG | + | chr1_2:68178224-68178243 | Msa0087270:CDS | 65.0% | |
| CGAAGGTGGAGGGACGTGGT+CGG | + | chr1_2:68178228-68178247 | Msa0087270:CDS | 65.0% | |
| ATTCTGGCGGCGCATGTCGC+CGG | - | chr1_2:68178266-68178285 | None:intergenic | 65.0% | |
| CCGACGGAAACAGCGATGGC+CGG | - | chr1_2:68178398-68178417 | None:intergenic | 65.0% | |
| ! | CCGGCCATCGCTGTTTCCGT+CGG | + | chr1_2:68178395-68178414 | Msa0087270:CDS | 65.0% |
| ! | GCCATCGCTGTTTCCGTCGG+AGG | + | chr1_2:68178398-68178417 | Msa0087270:CDS | 65.0% |
| TCATCTCCGGCGAGACCGGA+CGG | + | chr1_2:68178440-68178459 | Msa0087270:CDS | 65.0% | |
| TCTTCACCGTCCGGTCTCGC+CGG | - | chr1_2:68178449-68178468 | None:intergenic | 65.0% | |
| !! | GCATACGGTGCCACCACCTC+CGG | + | chr1_2:68178569-68178588 | Msa0087270:CDS | 65.0% |
| ACTACCACCACCACCGGAGG+TGG | - | chr1_2:68178585-68178604 | None:intergenic | 65.0% | |
| !! | ACCTCCGGTGGTGGTGGTAG+TGG | + | chr1_2:68178584-68178603 | Msa0087270:CDS | 65.0% |
| ACCACTACCACCACCACCGG+AGG | - | chr1_2:68178588-68178607 | None:intergenic | 65.0% | |
| GCAGGCTCCGTTGTCTCCGA+CGG | - | chr1_2:68178095-68178114 | None:intergenic | 65.0% | |
| GTCGGAGACAACGGAGCCTG+CGG | + | chr1_2:68178094-68178113 | Msa0087270:CDS | 65.0% | |
| CACACGAAGGTGGAGGGACG+TGG | + | chr1_2:68178224-68178243 | Msa0087270:CDS | 65.0% | |
| CGAAGGTGGAGGGACGTGGT+CGG | + | chr1_2:68178228-68178247 | Msa0087270:CDS | 65.0% | |
| ATTCTGGCGGCGCATGTCGC+CGG | - | chr1_2:68178266-68178285 | None:intergenic | 65.0% | |
| CCGACGGAAACAGCGATGGC+CGG | - | chr1_2:68178398-68178417 | None:intergenic | 65.0% | |
| ! | CCGGCCATCGCTGTTTCCGT+CGG | + | chr1_2:68178395-68178414 | Msa0087270:CDS | 65.0% |
| ! | GCCATCGCTGTTTCCGTCGG+AGG | + | chr1_2:68178398-68178417 | Msa0087270:CDS | 65.0% |
| TCATCTCCGGCGAGACCGGA+CGG | + | chr1_2:68178440-68178459 | Msa0087270:CDS | 65.0% | |
| TCTTCACCGTCCGGTCTCGC+CGG | - | chr1_2:68178449-68178468 | None:intergenic | 65.0% | |
| !! | GCATACGGTGCCACCACCTC+CGG | + | chr1_2:68178569-68178588 | Msa0087270:CDS | 65.0% |
| ACTACCACCACCACCGGAGG+TGG | - | chr1_2:68178585-68178604 | None:intergenic | 65.0% | |
| !! | ACCTCCGGTGGTGGTGGTAG+TGG | + | chr1_2:68178584-68178603 | Msa0087270:CDS | 65.0% |
| ACCACTACCACCACCACCGG+AGG | - | chr1_2:68178588-68178607 | None:intergenic | 65.0% | |
| GGAGACAACGGAGCCTGCGG+CGG | + | chr1_2:68178097-68178116 | Msa0087270:CDS | 70.0% | |
| TGACAGTGGCGGCGGCGAAG+AGG | + | chr1_2:68178186-68178205 | Msa0087270:CDS | 70.0% | |
| GGCCGGCACAGTTCCAGTGC+CGG | - | chr1_2:68178381-68178400 | None:intergenic | 70.0% | |
| !! | TACGGTGCCACCACCTCCGG+TGG | + | chr1_2:68178572-68178591 | Msa0087270:CDS | 70.0% |
| ACCACCACCACCGGAGGTGG+TGG | - | chr1_2:68178582-68178601 | None:intergenic | 70.0% | |
| GGAGACAACGGAGCCTGCGG+CGG | + | chr1_2:68178097-68178116 | Msa0087270:CDS | 70.0% | |
| TGACAGTGGCGGCGGCGAAG+AGG | + | chr1_2:68178186-68178205 | Msa0087270:CDS | 70.0% | |
| GGCCGGCACAGTTCCAGTGC+CGG | - | chr1_2:68178381-68178400 | None:intergenic | 70.0% | |
| !! | TACGGTGCCACCACCTCCGG+TGG | + | chr1_2:68178572-68178591 | Msa0087270:CDS | 70.0% |
| ACCACCACCACCGGAGGTGG+TGG | - | chr1_2:68178582-68178601 | None:intergenic | 70.0% | |
| GACAACGGAGCCTGCGGCGG+CGG | + | chr1_2:68178100-68178119 | Msa0087270:CDS | 75.0% | |
| ! | GGTGCCACCACCTCCGGTGG+TGG | + | chr1_2:68178575-68178594 | Msa0087270:CDS | 75.0% |
| ! | GCCACCACCTCCGGTGGTGG+TGG | + | chr1_2:68178578-68178597 | Msa0087270:CDS | 75.0% |
| GACAACGGAGCCTGCGGCGG+CGG | + | chr1_2:68178100-68178119 | Msa0087270:CDS | 75.0% | |
| ! | GGTGCCACCACCTCCGGTGG+TGG | + | chr1_2:68178575-68178594 | Msa0087270:CDS | 75.0% |
| ! | GCCACCACCTCCGGTGGTGG+TGG | + | chr1_2:68178578-68178597 | Msa0087270:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 68177690 | 68179042 | 68177690 | ID=Msa0087270;Name=Msa0087270 |
| chr1_2 | mRNA | 68177690 | 68179042 | 68177690 | ID=Msa0087270-mRNA-1;Parent=Msa0087270;Name=Msa0087270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0|0.33|3|0|385 |
| chr1_2 | exon | 68177690 | 68177719 | 68177690 | ID=Msa0087270-mRNA-1:exon:23177;Parent=Msa0087270-mRNA-1 |
| chr1_2 | exon | 68177817 | 68177920 | 68177817 | ID=Msa0087270-mRNA-1:exon:23178;Parent=Msa0087270-mRNA-1 |
| chr1_2 | exon | 68178019 | 68179042 | 68178019 | ID=Msa0087270-mRNA-1:exon:23179;Parent=Msa0087270-mRNA-1 |
| chr1_2 | CDS | 68177690 | 68177719 | 68177690 | ID=Msa0087270-mRNA-1:cds;Parent=Msa0087270-mRNA-1 |
| chr1_2 | CDS | 68177817 | 68177920 | 68177817 | ID=Msa0087270-mRNA-1:cds;Parent=Msa0087270-mRNA-1 |
| chr1_2 | CDS | 68178019 | 68179042 | 68178019 | ID=Msa0087270-mRNA-1:cds;Parent=Msa0087270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
