Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089370 | XP_013470032.1 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089370 | sp|Q93ZR1|ELP3_ARATH | 91.150 | 565 | 48 | 1 | 1 | 563 | 1 | 565 | 0.0 | 1083 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089370 | A0A072W1A9 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1152 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0089370 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089370 | MtrunA17_Chr1g0207811 | 98.757 | 563 | 7 | 0 | 1 | 563 | 1 | 563 | 0.0 | 1152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0089370 | AT5G50320.1 | 91.150 | 565 | 48 | 1 | 1 | 563 | 1 | 565 | 0.0 | 1083 |
Find 207 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGTGAGCTCCATGTTTA+TGG | 0.109347 | 1_2:+70844391 | Msa0089370:CDS |
| CCACCTCTTCTGGTTTAATT+TGG | 0.193138 | 1_2:-70843969 | None:intergenic |
| TCAGGTTGAGTTTATATTAA+TGG | 0.195676 | 1_2:+70841488 | Msa0089370:intron |
| CACTACTTGTCCAGAGCTTA+TGG | 0.210436 | 1_2:+70844354 | Msa0089370:CDS |
| ACGCCATTACTACAGAAAAT+TGG | 0.214514 | 1_2:+70844811 | Msa0089370:CDS |
| CGAACAAGTTCCACCTCTTC+TGG | 0.222979 | 1_2:-70843979 | None:intergenic |
| ACTAAGATAGCTGTAATTTC+TGG | 0.226240 | 1_2:+70844779 | Msa0089370:CDS |
| GACGGGTTTGGCTCGGAGTT+TGG | 0.246198 | 1_2:-70841003 | None:intergenic |
| ATTACCGTGATTACTTTATA+AGG | 0.254776 | 1_2:+70841538 | Msa0089370:CDS |
| ACTTGTTCGTCGTGATTATA+TGG | 0.272919 | 1_2:+70843993 | Msa0089370:CDS |
| TGCAATCATCTCAACAAGTT+TGG | 0.275543 | 1_2:-70840946 | None:intergenic |
| CCAATGCCTTTGGTGACCTC+TGG | 0.281758 | 1_2:+70843717 | Msa0089370:CDS |
| CAGGTTGAGTTTATATTAAT+GGG | 0.294302 | 1_2:+70841489 | Msa0089370:intron |
| GGGTTATGGTACACTTCTTA+TGG | 0.305200 | 1_2:+70844718 | Msa0089370:intron |
| CTACCTCTTGTCTGCACATA+AGG | 0.308325 | 1_2:-70841326 | None:intergenic |
| ACGGGTTTGGCTCGGAGTTT+GGG | 0.323050 | 1_2:-70841002 | None:intergenic |
| CTTGAGCAGGATATCCTTGT+TGG | 0.326582 | 1_2:+70844301 | Msa0089370:intron |
| AATTATTGTTAACAGGGTTA+TGG | 0.336285 | 1_2:+70844704 | Msa0089370:intron |
| TTACTGATTATTATTACATT+AGG | 0.340713 | 1_2:-70844868 | None:intergenic |
| ATTGATCAGCTTAAGCGTTT+AGG | 0.349355 | 1_2:+70841350 | Msa0089370:CDS |
| AGTACTGCAAATTAAGATAC+TGG | 0.351299 | 1_2:+70845037 | Msa0089370:three_prime_UTR |
| AAACCCGTCCGAACCGCATC+TGG | 0.355392 | 1_2:+70841017 | Msa0089370:CDS |
| CTTTATGAGCTCTGGAAAAC+TGG | 0.356965 | 1_2:+70843467 | Msa0089370:CDS |
| CAATGCCTTTGGTGACCTCT+GGG | 0.357014 | 1_2:+70843718 | Msa0089370:CDS |
| ACTCTTGTAATACGTGGAAC+TGG | 0.357820 | 1_2:+70843443 | Msa0089370:CDS |
| CAGTACTAGCTTACGGAGAA+TGG | 0.361122 | 1_2:-70845021 | None:intergenic |
| GGGTTGAGAAAGGGAATCTA+AGG | 0.374003 | 1_2:+70843739 | Msa0089370:CDS |
| ATTAGGTATTTCATCATGTA+AGG | 0.374054 | 1_2:-70844851 | None:intergenic |
| AGGAGGCCAGATTATTGTCT+TGG | 0.377113 | 1_2:+70842574 | Msa0089370:intron |
| AATCTTCATGATGCTTTGTC+TGG | 0.377549 | 1_2:+70841561 | Msa0089370:CDS |
| TACCTGGATTCCAGCTTCTC+TGG | 0.383322 | 1_2:-70843817 | None:intergenic |
| TCTGCTGCGTGCCGTAAGTA+TGG | 0.383722 | 1_2:+70840909 | Msa0089370:CDS |
| TCCCTTTCAACACCAACATT+TGG | 0.384171 | 1_2:-70843353 | None:intergenic |
| TGGAACTTTCATGTCCCTTC+CGG | 0.386776 | 1_2:+70841512 | Msa0089370:CDS |
| GGAACTGCTGTACCGGTTCA+TGG | 0.389741 | 1_2:+70844412 | Msa0089370:CDS |
| AGAACCTCTCGTTCGGAGTC+TGG | 0.399137 | 1_2:-70840975 | None:intergenic |
| CTAAGATAGCTGTAATTTCT+GGG | 0.402023 | 1_2:+70844780 | Msa0089370:CDS |
| GTGCAGTCGTACCAGAGAGG+GGG | 0.402428 | 1_2:-70840228 | None:intergenic |
| CGCCATTACTACAGAAAATT+GGG | 0.402981 | 1_2:+70844812 | Msa0089370:CDS |
| CTGAGTACTGTATTCAAAAT+CGG | 0.405571 | 1_2:-70841135 | None:intergenic |
| GCGGGATATTCCAATGCCTT+TGG | 0.406417 | 1_2:+70843707 | Msa0089370:CDS |
| TGCAGTCGTACCAGAGAGGG+GGG | 0.406787 | 1_2:-70840227 | None:intergenic |
| GGCTAAAGATGCCGGTTTCA+AGG | 0.407082 | 1_2:+70842729 | Msa0089370:CDS |
| CAAGTTGCAACAATGCTATA+TGG | 0.408186 | 1_2:-70845155 | None:intergenic |
| GCAATCATCTCAACAAGTTT+GGG | 0.412290 | 1_2:-70840945 | None:intergenic |
| CCTGGGAAAGGAGGCTTTGA+AGG | 0.415150 | 1_2:+70840777 | Msa0089370:CDS |
| GTTTAAAATGTCGTGATGTT+CGG | 0.419207 | 1_2:+70843793 | Msa0089370:CDS |
| AGATGCGGTTCGGACGGGTT+TGG | 0.419639 | 1_2:-70841015 | None:intergenic |
| GAGCGTTGAGATCAACTTTG+TGG | 0.429078 | 1_2:-70840881 | None:intergenic |
| CAACATCCTCGTAAGTGCTT+TGG | 0.432775 | 1_2:-70842651 | None:intergenic |
| AAAATATGAATGCCTTATGA+TGG | 0.435686 | 1_2:-70844976 | None:intergenic |
| GTGACCTCTGGGGTTGAGAA+AGG | 0.437552 | 1_2:+70843729 | Msa0089370:CDS |
| GGAGGCCAGATTATTGTCTT+GGG | 0.438031 | 1_2:+70842575 | Msa0089370:intron |
| TTCTTACGGTTGTACACGAT+TGG | 0.440324 | 1_2:+70842618 | Msa0089370:CDS |
| ACACCAACATTTGGAAGATC+AGG | 0.441020 | 1_2:-70843344 | None:intergenic |
| ATTATATGGCAAATGAAGGT+TGG | 0.442902 | 1_2:+70844007 | Msa0089370:CDS |
| TGCTCGAATTGCACGCATAC+TGG | 0.443181 | 1_2:-70841180 | None:intergenic |
| TAATTTGCAGTACTAGCTTA+CGG | 0.444403 | 1_2:-70845028 | None:intergenic |
| TAGGTTAATCTATTAAAGTT+CGG | 0.447850 | 1_2:-70845084 | None:intergenic |
| GTGCTTGGAGTTATCGAGAA+TGG | 0.452767 | 1_2:+70840716 | Msa0089370:exon |
| TCAGAATGCCGCCCATGAAC+CGG | 0.456948 | 1_2:-70844424 | None:intergenic |
| GGTTGTACACGATTGGAGAT+TGG | 0.457491 | 1_2:+70842625 | Msa0089370:CDS |
| GACACAAATGTTACCGGTGG+TGG | 0.462023 | 1_2:-70841090 | None:intergenic |
| CGGTTCGGACGGGTTTGGCT+CGG | 0.462397 | 1_2:-70841010 | None:intergenic |
| TTCCAAATGTTGGTGTTGAA+AGG | 0.463184 | 1_2:+70843351 | Msa0089370:CDS |
| GCAGTAGACACAAATGTTAC+CGG | 0.465327 | 1_2:-70841096 | None:intergenic |
| ACTACTTGTCCAGAGCTTAT+GGG | 0.466121 | 1_2:+70844355 | Msa0089370:CDS |
| TCCAAATGTTGGTGTTGAAA+GGG | 0.466271 | 1_2:+70843352 | Msa0089370:CDS |
| AAATCGGAGTCAGGACCGCC+AGG | 0.474986 | 1_2:-70841119 | None:intergenic |
| GATGTTCGGACCAGAGAAGC+TGG | 0.475031 | 1_2:+70843807 | Msa0089370:CDS |
| GGTGCAGTCGTACCAGAGAG+GGG | 0.475448 | 1_2:-70840229 | None:intergenic |
| TTATATGGCAAATGAAGGTT+GGG | 0.475457 | 1_2:+70844008 | Msa0089370:CDS |
| GGGTGCAGTCGTACCAGAGA+GGG | 0.477885 | 1_2:-70840230 | None:intergenic |
| CCAGAGGTCACCAAAGGCAT+TGG | 0.478943 | 1_2:-70843717 | None:intergenic |
| AGTCCCTTGTTTAGAGCAGA+TGG | 0.482729 | 1_2:+70843404 | Msa0089370:CDS |
| TACGGAGAATGGGAGGTAAT+GGG | 0.482797 | 1_2:-70845010 | None:intergenic |
| AACATTTGTGTCTACTGCCC+TGG | 0.483658 | 1_2:+70841101 | Msa0089370:CDS |
| TTACGGAGAATGGGAGGTAA+TGG | 0.486813 | 1_2:-70845011 | None:intergenic |
| CCTTCAAAGCCTCCTTTCCC+AGG | 0.487403 | 1_2:-70840777 | None:intergenic |
| GAACTGGGCTTTATGAGCTC+TGG | 0.487484 | 1_2:+70843459 | Msa0089370:CDS |
| CTCTTGTAATACGTGGAACT+GGG | 0.488163 | 1_2:+70843444 | Msa0089370:CDS |
| GGGAAGAAGAACCTCTCGTT+CGG | 0.489882 | 1_2:-70840982 | None:intergenic |
| CTGTATTCAAAATCGGAGTC+AGG | 0.494942 | 1_2:-70841128 | None:intergenic |
| GGCAACTGCAATGGTGGCAG+AGG | 0.495159 | 1_2:+70840737 | Msa0089370:CDS |
| TACCTCTTGTCTGCACATAA+GGG | 0.499999 | 1_2:-70841325 | None:intergenic |
| ACAGTAACAAACCTTGAAAC+CGG | 0.500422 | 1_2:-70842740 | None:intergenic |
| TGTTTATGGAACTGCTGTAC+CGG | 0.502199 | 1_2:+70844405 | Msa0089370:CDS |
| TGAGGCCCAAGACAATAATC+TGG | 0.507785 | 1_2:-70842580 | None:intergenic |
| AGTGAGCGATAGTGTGAGGA+AGG | 0.508703 | 1_2:-70840284 | None:intergenic |
| TATTCCAGATGCGGTTCGGA+CGG | 0.509432 | 1_2:-70841021 | None:intergenic |
| ATAGCTGTAATTTCTGGGGT+TGG | 0.510369 | 1_2:+70844785 | Msa0089370:CDS |
| CATAGTGCAACCAAGTGTAT+TGG | 0.511814 | 1_2:+70841627 | Msa0089370:CDS |
| ATTCCAGATGCGGTTCGGAC+GGG | 0.513072 | 1_2:-70841020 | None:intergenic |
| GACCAGAGAAGCTGGAATCC+AGG | 0.513139 | 1_2:+70843815 | Msa0089370:CDS |
| TGAAACCGGCATCTTTAGCC+AGG | 0.513631 | 1_2:-70842726 | None:intergenic |
| CGGCTATTCCAGATGCGGTT+CGG | 0.514134 | 1_2:-70841025 | None:intergenic |
| CTGCGACAAATGCTTTCTTA+CGG | 0.521566 | 1_2:+70842604 | Msa0089370:CDS |
| CTAAAACAATTGAACTGTTG+AGG | 0.521704 | 1_2:-70840694 | None:intergenic |
| CACGTGCTTCTTCTTCACTA+AGG | 0.522717 | 1_2:-70840806 | None:intergenic |
| CGTGATTATATGGCAAATGA+AGG | 0.524748 | 1_2:+70844003 | Msa0089370:CDS |
| GGAGTTAGCATTAGCTCGAA+TGG | 0.524838 | 1_2:+70843761 | Msa0089370:CDS |
| AATTGTCATGCCAATACACT+TGG | 0.525376 | 1_2:-70841637 | None:intergenic |
| ACTCTATAAACACGCGTCCA+TGG | 0.528985 | 1_2:-70843681 | None:intergenic |
| AAGCCTCCTTTCCCAGGACG+TGG | 0.530868 | 1_2:-70840771 | None:intergenic |
| CGCCTCTTCTACATTGGCAG+AGG | 0.532370 | 1_2:-70841589 | None:intergenic |
| TGCCCTCACATTGCCACCAC+CGG | 0.535961 | 1_2:+70841077 | Msa0089370:CDS |
| AATTGGGATATGAGCTTGAA+GGG | 0.539350 | 1_2:+70844828 | Msa0089370:CDS |
| CGTCACCGCCTCTTCTACAT+TGG | 0.539713 | 1_2:-70841595 | None:intergenic |
| TGGTACACTTCTTATGGAGG+AGG | 0.541142 | 1_2:+70844724 | Msa0089370:CDS |
| AAAGGAGGCTTTGAAGGCCA+CGG | 0.542814 | 1_2:+70840783 | Msa0089370:CDS |
| ATTAGCTCGAATGGAAGACT+TGG | 0.543470 | 1_2:+70843770 | Msa0089370:CDS |
| GGAGAAACTGAATCAGTGAT+GGG | 0.543828 | 1_2:-70840311 | None:intergenic |
| GTCATATGAAGATACACGGC+AGG | 0.543921 | 1_2:+70844041 | Msa0089370:CDS |
| AGTACTAGCTTACGGAGAAT+GGG | 0.545743 | 1_2:-70845020 | None:intergenic |
| AACTTTCATGTCCCTTCCGG+CGG | 0.546193 | 1_2:+70841515 | Msa0089370:CDS |
| GAACTGCTGTACCGGTTCAT+GGG | 0.546285 | 1_2:+70844413 | Msa0089370:CDS |
| ATGAGCTCTGGAAAACTGGC+AGG | 0.546949 | 1_2:+70843471 | Msa0089370:CDS |
| AAATATGAATGCCTTATGAT+GGG | 0.547238 | 1_2:-70844975 | None:intergenic |
| GAACACTTACCCATAAGCTC+TGG | 0.547667 | 1_2:-70844364 | None:intergenic |
| ATGATGTCCACAAGTTGCTC+AGG | 0.548538 | 1_2:-70843633 | None:intergenic |
| GGGAGAAACTGAATCAGTGA+TGG | 0.549026 | 1_2:-70840312 | None:intergenic |
| GAAGAGTGAGCGATAGTGTG+AGG | 0.552750 | 1_2:-70840288 | None:intergenic |
| AAGCCCATCTGCTCTAAACA+AGG | 0.553799 | 1_2:-70843408 | None:intergenic |
| CCAAATTAAACCAGAAGAGG+TGG | 0.554019 | 1_2:+70843969 | Msa0089370:CDS |
| TGACCTCTGGGGTTGAGAAA+GGG | 0.554088 | 1_2:+70843730 | Msa0089370:CDS |
| GCTCTGGACAAGTAGTGTTA+CGG | 0.560794 | 1_2:-70844348 | None:intergenic |
| CACGTGAGAGGCCATACTTA+CGG | 0.562539 | 1_2:-70840920 | None:intergenic |
| ATGGTCGACTTATCTCATAA+AGG | 0.565397 | 1_2:+70840858 | Msa0089370:CDS |
| CTTCTTCTTCACTAAGGCCG+TGG | 0.565667 | 1_2:-70840800 | None:intergenic |
| AAGGCACCACGTCCTGGGAA+AGG | 0.568173 | 1_2:+70840765 | Msa0089370:CDS |
| AAATTGGGATATGAGCTTGA+AGG | 0.569511 | 1_2:+70844827 | Msa0089370:CDS |
| GACAAACTTGCATAACCATA+CGG | 0.570245 | 1_2:-70845133 | None:intergenic |
| ATCGAGAATGGCAACTGCAA+TGG | 0.572062 | 1_2:+70840728 | Msa0089370:exon |
| GCGTGTTTATAGAGTTCAGC+GGG | 0.572842 | 1_2:+70843689 | Msa0089370:CDS |
| AACCCTTATGTGCAGACAAG+AGG | 0.578250 | 1_2:+70841323 | Msa0089370:CDS |
| ATGTCCACAAGTTGCTCAGG+TGG | 0.579117 | 1_2:-70843630 | None:intergenic |
| GGGGTGCAGTCGTACCAGAG+AGG | 0.580051 | 1_2:-70840231 | None:intergenic |
| GGAGAAACTTACAGTAGCAG+AGG | 0.580634 | 1_2:-70840333 | None:intergenic |
| TCCTTGCAATGGTACCTCCA+TGG | 0.582174 | 1_2:+70843664 | Msa0089370:CDS |
| TTAGCTCGAATGGAAGACTT+GGG | 0.582791 | 1_2:+70843771 | Msa0089370:CDS |
| CGTAAGAAAGCATTTGTCGC+AGG | 0.582996 | 1_2:-70842603 | None:intergenic |
| TTATCCACCTGAGCAACTTG+TGG | 0.584183 | 1_2:+70843626 | Msa0089370:CDS |
| TTGTTACGACTGCGAAAATG+TGG | 0.584825 | 1_2:+70844325 | Msa0089370:CDS |
| CACCTCTGCCAATGTAGAAG+AGG | 0.586680 | 1_2:+70841587 | Msa0089370:CDS |
| CGAATTGCACGCATACTGGT+AGG | 0.587485 | 1_2:-70841176 | None:intergenic |
| GTTGAGTTTATATTAATGGG+TGG | 0.587623 | 1_2:+70841492 | Msa0089370:CDS |
| GTCCCTTGTTTAGAGCAGAT+GGG | 0.588499 | 1_2:+70843405 | Msa0089370:CDS |
| GTTGCTCGTGACACTAATAG+AGG | 0.589637 | 1_2:+70842670 | Msa0089370:CDS |
| TGCAGAGATTGTAAACTCCA+TGG | 0.589639 | 1_2:+70840839 | Msa0089370:CDS |
| GTGAGCGATAGTGTGAGGAA+GGG | 0.589683 | 1_2:-70840283 | None:intergenic |
| TTCTGACAAGCTACAACACC+AGG | 0.589825 | 1_2:+70844441 | Msa0089370:CDS |
| CAAGTTTGGGTGCACGTGAG+AGG | 0.590702 | 1_2:-70840932 | None:intergenic |
| TCACCAAATTAAACCAGAAG+AGG | 0.591716 | 1_2:+70843966 | Msa0089370:CDS |
| GGAGTTTACAATCTCTGCAA+TGG | 0.592885 | 1_2:-70840835 | None:intergenic |
| ATGCCTGATCTTCCAAATGT+TGG | 0.593013 | 1_2:+70843341 | Msa0089370:CDS |
| ACACATGCTACAAAATTACA+TGG | 0.595514 | 1_2:-70844931 | None:intergenic |
| TACCCCACTCTTGTAATACG+TGG | 0.597220 | 1_2:+70843437 | Msa0089370:CDS |
| CTGCTGTACCGGTTCATGGG+CGG | 0.600008 | 1_2:+70844416 | Msa0089370:CDS |
| GTGTATACAACAGCGAATGT+AGG | 0.603146 | 1_2:-70845103 | None:intergenic |
| AAGTAATCACGGTAATCCGC+CGG | 0.605266 | 1_2:-70841531 | None:intergenic |
| GAAAGCATTTGTCGCAGGTG+AGG | 0.608219 | 1_2:-70842598 | None:intergenic |
| GTTCCACGTATTACAAGAGT+GGG | 0.609518 | 1_2:-70843440 | None:intergenic |
| GAGAATGGCAACTGCAATGG+TGG | 0.611617 | 1_2:+70840731 | Msa0089370:exon |
| CTCTGCCAATGTAGAAGAGG+CGG | 0.613175 | 1_2:+70841590 | Msa0089370:CDS |
| GCACCACGTCCTGGGAAAGG+AGG | 0.613203 | 1_2:+70840768 | Msa0089370:CDS |
| TCCATGGAGGTACCATTGCA+AGG | 0.615787 | 1_2:-70843665 | None:intergenic |
| AGTTCCACGTATTACAAGAG+TGG | 0.617723 | 1_2:-70843441 | None:intergenic |
| GATTCCTTATAAAGTAATCA+CGG | 0.618997 | 1_2:-70841542 | None:intergenic |
| ATCACGGTAATCCGCCGGAA+GGG | 0.620461 | 1_2:-70841526 | None:intergenic |
| TTTAGGTCACAGTGTAGACA+AGG | 0.621502 | 1_2:+70841367 | Msa0089370:CDS |
| TACAGTACTCAGTCTTACAC+TGG | 0.624637 | 1_2:+70841146 | Msa0089370:CDS |
| TTACCGGTGGTGGCAATGTG+AGG | 0.625457 | 1_2:-70841080 | None:intergenic |
| TTATGGTACACTTCTTATGG+AGG | 0.625503 | 1_2:+70844721 | Msa0089370:CDS |
| GTATACACGAGCTGACCGTA+TGG | 0.627033 | 1_2:+70845118 | Msa0089370:three_prime_UTR |
| AATCACGGTAATCCGCCGGA+AGG | 0.629594 | 1_2:-70841527 | None:intergenic |
| CTTTGACATGACAGCAACAA+CGG | 0.631924 | 1_2:-70841045 | None:intergenic |
| GTACAGCAGTTCCATAAACA+TGG | 0.632941 | 1_2:-70844402 | None:intergenic |
| AATGCCTTTGGTGACCTCTG+GGG | 0.633442 | 1_2:+70843719 | Msa0089370:CDS |
| CTTATGTGCAGACAAGAGGT+AGG | 0.635365 | 1_2:+70841327 | Msa0089370:CDS |
| TAAGATAGCTGTAATTTCTG+GGG | 0.637498 | 1_2:+70844781 | Msa0089370:CDS |
| TTTACCAGACTCCGAACGAG+AGG | 0.637913 | 1_2:+70840971 | Msa0089370:CDS |
| GAGAAACTTACAGTAGCAGA+GGG | 0.642848 | 1_2:-70840332 | None:intergenic |
| GCGATAGTGTGAGGAAGGGA+CGG | 0.648261 | 1_2:-70840279 | None:intergenic |
| AGCCCATCTGCTCTAAACAA+GGG | 0.651856 | 1_2:-70843407 | None:intergenic |
| ATTTGTGTCTACTGCCCTGG+CGG | 0.653081 | 1_2:+70841104 | Msa0089370:CDS |
| AATCGGAGTCAGGACCGCCA+GGG | 0.654250 | 1_2:-70841118 | None:intergenic |
| CATAGCAAGGATCCTTGCAA+TGG | 0.656475 | 1_2:+70843653 | Msa0089370:CDS |
| GTATGCGTGCAATTCGAGCA+AGG | 0.657253 | 1_2:+70841183 | Msa0089370:CDS |
| AACTTGTGGACATCATAGCA+AGG | 0.660784 | 1_2:+70843640 | Msa0089370:CDS |
| TGTTGGTGTTGAAAGGGACA+TGG | 0.661690 | 1_2:+70843358 | Msa0089370:CDS |
| GCAGTCGTACCAGAGAGGGG+GGG | 0.662809 | 1_2:-70840226 | None:intergenic |
| GAGAAACTGAATCAGTGATG+GGG | 0.667376 | 1_2:-70840310 | None:intergenic |
| TCAACCCCAGAGGTCACCAA+AGG | 0.669888 | 1_2:-70843723 | None:intergenic |
| TTTATGAGATAAGTCGACCA+TGG | 0.671183 | 1_2:-70840856 | None:intergenic |
| TTCTTATGGAGGAGGCTGAG+CGG | 0.672319 | 1_2:+70844732 | Msa0089370:CDS |
| TGGAGTCCAAAGCACTTACG+AGG | 0.676860 | 1_2:+70842645 | Msa0089370:CDS |
| GCAATGTGAGGGCAACGATG+AGG | 0.677142 | 1_2:-70841068 | None:intergenic |
| AACAACGGCTATTCCAGATG+CGG | 0.680136 | 1_2:-70841030 | None:intergenic |
| ACTAGCTTACGGAGAATGGG+AGG | 0.682063 | 1_2:-70845017 | None:intergenic |
| GGTTGAGAAAGGGAATCTAA+GGG | 0.683574 | 1_2:+70843740 | Msa0089370:CDS |
| TACCGGTGGTGGCAATGTGA+GGG | 0.686745 | 1_2:-70841079 | None:intergenic |
| ATTCCCTTTCTCAACCCCAG+AGG | 0.690536 | 1_2:-70843733 | None:intergenic |
| CGCGTGTTTATAGAGTTCAG+CGG | 0.704736 | 1_2:+70843688 | Msa0089370:CDS |
| GTAGACACAAATGTTACCGG+TGG | 0.711036 | 1_2:-70841093 | None:intergenic |
| CTATAAACACGCGTCCATGG+AGG | 0.720117 | 1_2:-70843678 | None:intergenic |
| GCAGTCGTAACAAACCAACA+AGG | 0.760494 | 1_2:-70844315 | None:intergenic |
| TTCCACGTATTACAAGAGTG+GGG | 0.762155 | 1_2:-70843439 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAATCTATTTTTTTTTTA+AGG | - | chr1_2:70841807-70841826 | None:intergenic | 10.0% |
| !!! | TTTTCATTTTTAAAAAAAAC+TGG | - | chr1_2:70841914-70841933 | None:intergenic | 10.0% |
| !!! | TTTTATGTTTTTTTTTTCTT+TGG | + | chr1_2:70843291-70843310 | Msa0089370:intron | 10.0% |
| !!! | AGTAATAGTTTTTTTTTTAA+GGG | + | chr1_2:70844886-70844905 | Msa0089370:three_prime_UTR | 10.0% |
| !! | TATCATGTAGTTATATTAAT+GGG | + | chr1_2:70841449-70841468 | Msa0089370:intron | 15.0% |
| !!! | AAAAAAAACTGGATTTTTAT+GGG | - | chr1_2:70841903-70841922 | None:intergenic | 15.0% |
| !!! | TAAAAAAAACTGGATTTTTA+TGG | - | chr1_2:70841904-70841923 | None:intergenic | 15.0% |
| !!! | TCTATTTTTATTCAAAAACA+AGG | - | chr1_2:70841967-70841986 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr1_2:70843094-70843113 | Msa0089370:intron | 15.0% |
| !! | AAAAGTAGAATATATTGTAT+TGG | + | chr1_2:70843118-70843137 | Msa0089370:intron | 15.0% |
| !! | AAAGTAGAATATATTGTATT+GGG | + | chr1_2:70843119-70843138 | Msa0089370:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr1_2:70843159-70843178 | Msa0089370:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr1_2:70843160-70843179 | Msa0089370:intron | 15.0% |
| !!! | TCTTGAAATTTAATTTAACA+AGG | + | chr1_2:70843860-70843879 | Msa0089370:intron | 15.0% |
| !!! | TTTGTTTACTAGTATTATTT+TGG | + | chr1_2:70843903-70843922 | Msa0089370:intron | 15.0% |
| !!! | TTACTGATTATTATTACATT+AGG | - | chr1_2:70844871-70844890 | None:intergenic | 15.0% |
| !!! | CAGTAATAGTTTTTTTTTTA+AGG | + | chr1_2:70844885-70844904 | Msa0089370:three_prime_UTR | 15.0% |
| !!! | ATGTGTTCTATTTTACTTAA+AGG | - | chr1_2:70841266-70841285 | None:intergenic | 20.0% |
| !! | GTATCATGTAGTTATATTAA+TGG | + | chr1_2:70841448-70841467 | Msa0089370:intron | 20.0% |
| !! | TCAACTTGCAAATAATTAAA+TGG | - | chr1_2:70841680-70841699 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCAAAAACAAGG+AGG | - | chr1_2:70841964-70841983 | None:intergenic | 20.0% |
| !!! | CTAAAAAAATCTGAAACAAA+CGG | + | chr1_2:70842109-70842128 | Msa0089370:intron | 20.0% |
| !!! | TAAAAAAATCTGAAACAAAC+GGG | + | chr1_2:70842110-70842129 | Msa0089370:intron | 20.0% |
| !! | AAAAAAAACTTCTTTCACAA+GGG | - | chr1_2:70842315-70842334 | None:intergenic | 20.0% |
| !! | TGTGTTAAATTAACTATTAC+CGG | - | chr1_2:70842512-70842531 | None:intergenic | 20.0% |
| !! | ATTAATAAGCAACTTTCTAT+AGG | + | chr1_2:70842931-70842950 | Msa0089370:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr1_2:70843229-70843248 | Msa0089370:intron | 20.0% |
| !!! | TTGTTTGTTAACATCATTTT+AGG | + | chr1_2:70843595-70843614 | Msa0089370:intron | 20.0% |
| !! | AAAAAATGATGATAGACAAA+AGG | - | chr1_2:70844109-70844128 | None:intergenic | 20.0% |
| !! | TAGGTTAATCTATTAAAGTT+CGG | - | chr1_2:70845087-70845106 | None:intergenic | 20.0% |
| ! | AAAGTAAAATCAGTAAGAGA+CGG | - | chr1_2:70840393-70840412 | None:intergenic | 25.0% |
| !!! | TCAGGTTGAGTTTATATTAA+TGG | + | chr1_2:70841488-70841507 | Msa0089370:intron | 25.0% |
| !! | CAGGTTGAGTTTATATTAAT+GGG | + | chr1_2:70841489-70841508 | Msa0089370:intron | 25.0% |
| ! | ATTACCGTGATTACTTTATA+AGG | + | chr1_2:70841538-70841557 | Msa0089370:CDS | 25.0% |
| ! | GATTCCTTATAAAGTAATCA+CGG | - | chr1_2:70841545-70841564 | None:intergenic | 25.0% |
| !!! | CTTTTGTGTAAAGTTTTGAA+TGG | + | chr1_2:70841709-70841728 | Msa0089370:intron | 25.0% |
| !! | TCCTAATAGCTTTTCATTTT+AGG | + | chr1_2:70842003-70842022 | Msa0089370:intron | 25.0% |
| !! | CCTAATAGCTTTTCATTTTA+GGG | + | chr1_2:70842004-70842023 | Msa0089370:intron | 25.0% |
| !! | AAAAAAATCTGAAACAAACG+GGG | + | chr1_2:70842111-70842130 | Msa0089370:intron | 25.0% |
| ! | GTTTAGTTACATGAATCAAA+TGG | - | chr1_2:70842290-70842309 | None:intergenic | 25.0% |
| ! | AAAAAAACTTCTTTCACAAG+GGG | - | chr1_2:70842314-70842333 | None:intergenic | 25.0% |
| ! | GAAAAAAAACTTCTTTCACA+AGG | - | chr1_2:70842316-70842335 | None:intergenic | 25.0% |
| ! | AACTAAACCAGTTTATATCA+TGG | - | chr1_2:70842409-70842428 | None:intergenic | 25.0% |
| !! | TGGTTTAGTTATGATTTTCT+AGG | + | chr1_2:70842419-70842438 | Msa0089370:intron | 25.0% |
| !! | GGTTTAGTTATGATTTTCTA+GGG | + | chr1_2:70842420-70842439 | Msa0089370:intron | 25.0% |
| ! | CATATCAATGATTATATTCG+TGG | + | chr1_2:70842465-70842484 | Msa0089370:intron | 25.0% |
| !! | TTTTAAACACATTCAGCATA+AGG | - | chr1_2:70842821-70842840 | None:intergenic | 25.0% |
| !!! | CTCGTTTTAAATAGATTCAT+TGG | + | chr1_2:70842902-70842921 | Msa0089370:intron | 25.0% |
| !!! | CATATTACTTTCTAGTTGTT+TGG | + | chr1_2:70842954-70842973 | Msa0089370:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr1_2:70843206-70843225 | Msa0089370:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr1_2:70843207-70843226 | Msa0089370:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr1_2:70843228-70843247 | Msa0089370:intron | 25.0% |
| ! | TTTCTATCTCATTATTCATC+AGG | + | chr1_2:70843547-70843566 | Msa0089370:intron | 25.0% |
| ! | CATTATTCATCAGGTTTAAA+AGG | + | chr1_2:70843556-70843575 | Msa0089370:intron | 25.0% |
| ! | ATTAAATTTCAAGACGAGAT+TGG | - | chr1_2:70843854-70843873 | None:intergenic | 25.0% |
| ! | TACAAAGAAATACAGAATGT+CGG | - | chr1_2:70843937-70843956 | None:intergenic | 25.0% |
| !! | TTTTGTCATATGAAGATACA+CGG | + | chr1_2:70844037-70844056 | Msa0089370:CDS | 25.0% |
| !!! | CCTTCTTTATTTTGAATGAA+GGG | + | chr1_2:70844193-70844212 | Msa0089370:intron | 25.0% |
| !!! | CTTCTTTATTTTGAATGAAG+GGG | + | chr1_2:70844194-70844213 | Msa0089370:intron | 25.0% |
| ! | CAACAACAAATTTACACTAA+AGG | - | chr1_2:70844241-70844260 | None:intergenic | 25.0% |
| ! | GAATATTCACATGTTCTTAT+TGG | + | chr1_2:70844508-70844527 | Msa0089370:intron | 25.0% |
| ! | ATCTTCTTGGATATTATACA+TGG | - | chr1_2:70844592-70844611 | None:intergenic | 25.0% |
| ! | AATATCCAAGAAGATACATA+TGG | + | chr1_2:70844597-70844616 | Msa0089370:intron | 25.0% |
| ! | AATATCCATATGTATCTTCT+TGG | - | chr1_2:70844605-70844624 | None:intergenic | 25.0% |
| !!! | CAATAATTTTGGTCAAAAGT+AGG | - | chr1_2:70844692-70844711 | None:intergenic | 25.0% |
| ! | TGACCAAAATTATTGTTAAC+AGG | + | chr1_2:70844697-70844716 | Msa0089370:intron | 25.0% |
| ! | GACCAAAATTATTGTTAACA+GGG | + | chr1_2:70844698-70844717 | Msa0089370:intron | 25.0% |
| !! | AACCCTGTTAACAATAATTT+TGG | - | chr1_2:70844703-70844722 | None:intergenic | 25.0% |
| ! | AATTATTGTTAACAGGGTTA+TGG | + | chr1_2:70844704-70844723 | Msa0089370:intron | 25.0% |
| ! | ATTAGGTATTTCATCATGTA+AGG | - | chr1_2:70844854-70844873 | None:intergenic | 25.0% |
| !!! | TATTTTAAATGCCCATCATA+AGG | + | chr1_2:70844964-70844983 | Msa0089370:three_prime_UTR | 25.0% |
| ! | AAATATGAATGCCTTATGAT+GGG | - | chr1_2:70844978-70844997 | None:intergenic | 25.0% |
| ! | AAAATATGAATGCCTTATGA+TGG | - | chr1_2:70844979-70844998 | None:intergenic | 25.0% |
| GATCTATTTACCTCATAAGA+TGG | + | chr1_2:70840576-70840595 | Msa0089370:intron | 30.0% | |
| CTAAAACAATTGAACTGTTG+AGG | - | chr1_2:70840697-70840716 | None:intergenic | 30.0% | |
| !!! | AGTTCAATTGTTTTAGTGCT+TGG | + | chr1_2:70840701-70840720 | Msa0089370:five_prime_UTR | 30.0% |
| ! | CTGAGTACTGTATTCAAAAT+CGG | - | chr1_2:70841138-70841157 | None:intergenic | 30.0% |
| ! | ACTTTGTTTGCTTTGGATTT+AGG | + | chr1_2:70841297-70841316 | Msa0089370:intron | 30.0% |
| ! | TGTAGTTATATTAATGGGTG+TGG | + | chr1_2:70841454-70841473 | Msa0089370:intron | 30.0% |
| GTTGAGTTTATATTAATGGG+TGG | + | chr1_2:70841492-70841511 | Msa0089370:CDS | 30.0% | |
| CTTGCAAATAATTAAATGGC+AGG | - | chr1_2:70841676-70841695 | None:intergenic | 30.0% | |
| !!! | TTGTGTAAAGTTTTGAATGG+AGG | + | chr1_2:70841712-70841731 | Msa0089370:intron | 30.0% |
| CCCTAAAATGAAAAGCTATT+AGG | - | chr1_2:70842007-70842026 | None:intergenic | 30.0% | |
| ACCAAGAAAAACTACAAATC+AGG | + | chr1_2:70842197-70842216 | Msa0089370:intron | 30.0% | |
| TACAAATCAGGCTATTAAGA+TGG | + | chr1_2:70842209-70842228 | Msa0089370:intron | 30.0% | |
| TAAACCAGTTTATATCATGG+CGG | - | chr1_2:70842406-70842425 | None:intergenic | 30.0% | |
| ACCTTTGAGTAAACTTTAAC+CGG | + | chr1_2:70842490-70842509 | Msa0089370:intron | 30.0% | |
| TTGCACTTCTTAAATTTCTC+AGG | + | chr1_2:70842554-70842573 | Msa0089370:intron | 30.0% | |
| ATATAGGAGAATAGTTTGAC+AGG | - | chr1_2:70842795-70842814 | None:intergenic | 30.0% | |
| ! | ATTTGAAAGGGGTACAATTA+GGG | - | chr1_2:70842984-70843003 | None:intergenic | 30.0% |
| ! | TATTTGAAAGGGGTACAATT+AGG | - | chr1_2:70842985-70843004 | None:intergenic | 30.0% |
| ! | TGCCTAGTTTGTATTTGAAA+GGG | - | chr1_2:70842996-70843015 | None:intergenic | 30.0% |
| !!! | TTTTCTTTGGCTTTTGCTTT+AGG | + | chr1_2:70843304-70843323 | Msa0089370:intron | 30.0% |
| AAGAACACATCACATTAGAT+AGG | - | chr1_2:70843499-70843518 | None:intergenic | 30.0% | |
| ! | GTTTAAAATGTCGTGATGTT+CGG | + | chr1_2:70843793-70843812 | Msa0089370:CDS | 30.0% |
| !! | ATTGGTTCTAGATAATTACC+TGG | - | chr1_2:70843836-70843855 | None:intergenic | 30.0% |
| GACATTCTGTATTTCTTTGT+AGG | + | chr1_2:70843936-70843955 | Msa0089370:intron | 30.0% | |
| ATTATATGGCAAATGAAGGT+TGG | + | chr1_2:70844007-70844026 | Msa0089370:CDS | 30.0% | |
| TTATATGGCAAATGAAGGTT+GGG | + | chr1_2:70844008-70844027 | Msa0089370:CDS | 30.0% | |
| ATGATGATAGACAAAAGGAT+AGG | - | chr1_2:70844104-70844123 | None:intergenic | 30.0% | |
| !!! | GCCTTCTTTATTTTGAATGA+AGG | + | chr1_2:70844192-70844211 | Msa0089370:intron | 30.0% |
| CCCTTCATTCAAAATAAAGA+AGG | - | chr1_2:70844196-70844215 | None:intergenic | 30.0% | |
| TTTACACTAAAGGTAAGAAC+AGG | - | chr1_2:70844231-70844250 | None:intergenic | 30.0% | |
| ! | TTGTTGTTGTTGATGAAACA+TGG | + | chr1_2:70844252-70844271 | Msa0089370:intron | 30.0% |
| ACTAAGATAGCTGTAATTTC+TGG | + | chr1_2:70844779-70844798 | Msa0089370:CDS | 30.0% | |
| CTAAGATAGCTGTAATTTCT+GGG | + | chr1_2:70844780-70844799 | Msa0089370:CDS | 30.0% | |
| TAAGATAGCTGTAATTTCTG+GGG | + | chr1_2:70844781-70844800 | Msa0089370:CDS | 30.0% | |
| ! | ATCCCAATTTTCTGTAGTAA+TGG | - | chr1_2:70844817-70844836 | None:intergenic | 30.0% |
| ACACATGCTACAAAATTACA+TGG | - | chr1_2:70844934-70844953 | None:intergenic | 30.0% | |
| ! | TGTAATTTTGTAGCATGTGT+TGG | + | chr1_2:70844934-70844953 | Msa0089370:three_prime_UTR | 30.0% |
| !! | GCATTCATATTTTTGCTCAA+AGG | + | chr1_2:70844986-70845005 | Msa0089370:three_prime_UTR | 30.0% |
| ! | TAATTTGCAGTACTAGCTTA+CGG | - | chr1_2:70845031-70845050 | None:intergenic | 30.0% |
| AGTACTGCAAATTAAGATAC+TGG | + | chr1_2:70845037-70845056 | Msa0089370:three_prime_UTR | 30.0% | |
| !!! | TGCTTTCAGTTTTAGGGTTT+GGG | - | chr1_2:70840259-70840278 | None:intergenic | 35.0% |
| TCGAAACAGTGATGAAAGAT+GGG | - | chr1_2:70840357-70840376 | None:intergenic | 35.0% | |
| GTGTGTTGTGAGTAATAGTA+AGG | + | chr1_2:70840517-70840536 | Msa0089370:intron | 35.0% | |
| TTGTGAGTAATAGTAAGGAG+AGG | + | chr1_2:70840522-70840541 | Msa0089370:intron | 35.0% | |
| GATCATCTAACCATCTTATG+AGG | - | chr1_2:70840589-70840608 | None:intergenic | 35.0% | |
| !! | AATCTTTCCGTTTTTGCTGT+AGG | + | chr1_2:70840620-70840639 | Msa0089370:intron | 35.0% |
| !! | ATCTTTCCGTTTTTGCTGTA+GGG | + | chr1_2:70840621-70840640 | Msa0089370:intron | 35.0% |
| ACAATTCCCTACAGCAAAAA+CGG | - | chr1_2:70840630-70840649 | None:intergenic | 35.0% | |
| TTTATGAGATAAGTCGACCA+TGG | - | chr1_2:70840859-70840878 | None:intergenic | 35.0% | |
| ! | ATGGTCGACTTATCTCATAA+AGG | + | chr1_2:70840858-70840877 | Msa0089370:CDS | 35.0% |
| GCAATCATCTCAACAAGTTT+GGG | - | chr1_2:70840948-70840967 | None:intergenic | 35.0% | |
| TGCAATCATCTCAACAAGTT+TGG | - | chr1_2:70840949-70840968 | None:intergenic | 35.0% | |
| ! | TTCGATGACTTTGTTTGCTT+TGG | + | chr1_2:70841290-70841309 | Msa0089370:intron | 35.0% |
| ATTGATCAGCTTAAGCGTTT+AGG | + | chr1_2:70841350-70841369 | Msa0089370:CDS | 35.0% | |
| !! | GGTGTGGTTTATTGTTTTTC+AGG | + | chr1_2:70841470-70841489 | Msa0089370:intron | 35.0% |
| AATCTTCATGATGCTTTGTC+TGG | + | chr1_2:70841561-70841580 | Msa0089370:CDS | 35.0% | |
| AATTGTCATGCCAATACACT+TGG | - | chr1_2:70841640-70841659 | None:intergenic | 35.0% | |
| ! | ACTGGATTTTTATGGGTAGT+AGG | - | chr1_2:70841896-70841915 | None:intergenic | 35.0% |
| !! | TACAGGGAGAATGGATTATA+TGG | + | chr1_2:70842143-70842162 | Msa0089370:intron | 35.0% |
| !! | GCCTGATTTGTAGTTTTTCT+TGG | - | chr1_2:70842201-70842220 | None:intergenic | 35.0% |
| !! | CAGGCTATTAAGATGGATTT+TGG | + | chr1_2:70842216-70842235 | Msa0089370:intron | 35.0% |
| TGATTCACAAGAAGACATTG+CGG | + | chr1_2:70842262-70842281 | Msa0089370:intron | 35.0% | |
| ACCGGTTAAAGTTTACTCAA+AGG | - | chr1_2:70842494-70842513 | None:intergenic | 35.0% | |
| GAAGTGCAAAACTTGATAAG+CGG | - | chr1_2:70842543-70842562 | None:intergenic | 35.0% | |
| CACTTCTTAAATTTCTCAGG+AGG | + | chr1_2:70842557-70842576 | Msa0089370:intron | 35.0% | |
| ACAGTAACAAACCTTGAAAC+CGG | - | chr1_2:70842743-70842762 | None:intergenic | 35.0% | |
| ! | ATTCAGCATAAGGAGCATAT+AGG | - | chr1_2:70842811-70842830 | None:intergenic | 35.0% |
| TTCATTACAACTTTGAGTGC+AGG | - | chr1_2:70842861-70842880 | None:intergenic | 35.0% | |
| ACCCCTTTCAAATACAAACT+AGG | + | chr1_2:70842991-70843010 | Msa0089370:intron | 35.0% | |
| ! | GCCTAGTTTGTATTTGAAAG+GGG | - | chr1_2:70842995-70843014 | None:intergenic | 35.0% |
| ! | CTGCCTAGTTTGTATTTGAA+AGG | - | chr1_2:70842997-70843016 | None:intergenic | 35.0% |
| TCAAATACAAACTAGGCAGT+AGG | + | chr1_2:70842998-70843017 | Msa0089370:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr1_2:70843059-70843078 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr1_2:70843060-70843079 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr1_2:70843073-70843092 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr1_2:70843242-70843261 | Msa0089370:intron | 35.0% | |
| !! | TTCCAAATGTTGGTGTTGAA+AGG | + | chr1_2:70843351-70843370 | Msa0089370:CDS | 35.0% |
| !! | TCCAAATGTTGGTGTTGAAA+GGG | + | chr1_2:70843352-70843371 | Msa0089370:CDS | 35.0% |
| AGGGACTTTCAAAAAACTCT+CGG | - | chr1_2:70843391-70843410 | None:intergenic | 35.0% | |
| AAGAAATACAGAATGTCGGT+TGG | - | chr1_2:70843933-70843952 | None:intergenic | 35.0% | |
| TCACCAAATTAAACCAGAAG+AGG | + | chr1_2:70843966-70843985 | Msa0089370:CDS | 35.0% | |
| ACTTGTTCGTCGTGATTATA+TGG | + | chr1_2:70843993-70844012 | Msa0089370:CDS | 35.0% | |
| CGTGATTATATGGCAAATGA+AGG | + | chr1_2:70844003-70844022 | Msa0089370:CDS | 35.0% | |
| ! | ATTAGCATGACAGTTTTACC+TGG | - | chr1_2:70844462-70844481 | None:intergenic | 35.0% |
| ! | TGAGTGTAATTGCTGAGTTT+TGG | + | chr1_2:70844539-70844558 | Msa0089370:intron | 35.0% |
| TACAATGAGGGACATGTTAT+TGG | - | chr1_2:70844659-70844678 | None:intergenic | 35.0% | |
| TTGGTCAAAAGTAGGTCAAT+TGG | - | chr1_2:70844684-70844703 | None:intergenic | 35.0% | |
| TTATGGTACACTTCTTATGG+AGG | + | chr1_2:70844721-70844740 | Msa0089370:CDS | 35.0% | |
| ACGCCATTACTACAGAAAAT+TGG | + | chr1_2:70844811-70844830 | Msa0089370:CDS | 35.0% | |
| CGCCATTACTACAGAAAATT+GGG | + | chr1_2:70844812-70844831 | Msa0089370:CDS | 35.0% | |
| AAATTGGGATATGAGCTTGA+AGG | + | chr1_2:70844827-70844846 | Msa0089370:CDS | 35.0% | |
| AATTGGGATATGAGCTTGAA+GGG | + | chr1_2:70844828-70844847 | Msa0089370:CDS | 35.0% | |
| GACAAACTTGCATAACCATA+CGG | - | chr1_2:70845136-70845155 | None:intergenic | 35.0% | |
| CAAGTTGCAACAATGCTATA+TGG | - | chr1_2:70845158-70845177 | None:intergenic | 35.0% | |
| !!! | TCAGTTTTAGGGTTTGGGTT+GGG | - | chr1_2:70840254-70840273 | None:intergenic | 40.0% |
| !!! | TTCAGTTTTAGGGTTTGGGT+TGG | - | chr1_2:70840255-70840274 | None:intergenic | 40.0% |
| !!! | GTGCTTTCAGTTTTAGGGTT+TGG | - | chr1_2:70840260-70840279 | None:intergenic | 40.0% |
| GAGAAACTGAATCAGTGATG+GGG | - | chr1_2:70840313-70840332 | None:intergenic | 40.0% | |
| GGAGAAACTGAATCAGTGAT+GGG | - | chr1_2:70840314-70840333 | None:intergenic | 40.0% | |
| GAGAAACTTACAGTAGCAGA+GGG | - | chr1_2:70840335-70840354 | None:intergenic | 40.0% | |
| CTCGAAACAGTGATGAAAGA+TGG | - | chr1_2:70840358-70840377 | None:intergenic | 40.0% | |
| GGAGTTTACAATCTCTGCAA+TGG | - | chr1_2:70840838-70840857 | None:intergenic | 40.0% | |
| TGCAGAGATTGTAAACTCCA+TGG | + | chr1_2:70840839-70840858 | Msa0089370:CDS | 40.0% | |
| CTTTGACATGACAGCAACAA+CGG | - | chr1_2:70841048-70841067 | None:intergenic | 40.0% | |
| GCAGTAGACACAAATGTTAC+CGG | - | chr1_2:70841099-70841118 | None:intergenic | 40.0% | |
| CTGTATTCAAAATCGGAGTC+AGG | - | chr1_2:70841131-70841150 | None:intergenic | 40.0% | |
| TACAGTACTCAGTCTTACAC+TGG | + | chr1_2:70841146-70841165 | Msa0089370:CDS | 40.0% | |
| TACCTCTTGTCTGCACATAA+GGG | - | chr1_2:70841328-70841347 | None:intergenic | 40.0% | |
| TTTAGGTCACAGTGTAGACA+AGG | + | chr1_2:70841367-70841386 | Msa0089370:CDS | 40.0% | |
| CATAGTGCAACCAAGTGTAT+TGG | + | chr1_2:70841627-70841646 | Msa0089370:CDS | 40.0% | |
| !!! | TTTTGAATGGAGGAGTGCTT+TGG | + | chr1_2:70841722-70841741 | Msa0089370:intron | 40.0% |
| !!! | GCTTTGGACTTTTTGGTGTT+TGG | + | chr1_2:70841738-70841757 | Msa0089370:intron | 40.0% |
| !!! | TTTTTGGTGTTTGGACACGT+GGG | + | chr1_2:70841747-70841766 | Msa0089370:intron | 40.0% |
| CCATTCTCCCTGTAAGATTT+AGG | - | chr1_2:70842137-70842156 | None:intergenic | 40.0% | |
| CCTAAATCTTACAGGGAGAA+TGG | + | chr1_2:70842134-70842153 | Msa0089370:intron | 40.0% | |
| !! | AGGGAGAATGGATTATATGG+AGG | + | chr1_2:70842146-70842165 | Msa0089370:intron | 40.0% |
| CTGCGACAAATGCTTTCTTA+CGG | + | chr1_2:70842604-70842623 | Msa0089370:CDS | 40.0% | |
| TTCTTACGGTTGTACACGAT+TGG | + | chr1_2:70842618-70842637 | Msa0089370:CDS | 40.0% | |
| !!! | TGTAGCTGATTGTTTTTGCC+TGG | + | chr1_2:70842708-70842727 | Msa0089370:CDS | 40.0% |
| ATACAAACTAGGCAGTAGGT+TGG | + | chr1_2:70843002-70843021 | Msa0089370:intron | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr1_2:70843057-70843076 | Msa0089370:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr1_2:70843243-70843262 | Msa0089370:intron | 40.0% | |
| ATGCCTGATCTTCCAAATGT+TGG | + | chr1_2:70843341-70843360 | Msa0089370:CDS | 40.0% | |
| ACACCAACATTTGGAAGATC+AGG | - | chr1_2:70843347-70843366 | None:intergenic | 40.0% | |
| TCCCTTTCAACACCAACATT+TGG | - | chr1_2:70843356-70843375 | None:intergenic | 40.0% | |
| TTCCACGTATTACAAGAGTG+GGG | - | chr1_2:70843442-70843461 | None:intergenic | 40.0% | |
| GTTCCACGTATTACAAGAGT+GGG | - | chr1_2:70843443-70843462 | None:intergenic | 40.0% | |
| AGTTCCACGTATTACAAGAG+TGG | - | chr1_2:70843444-70843463 | None:intergenic | 40.0% | |
| ACTCTTGTAATACGTGGAAC+TGG | + | chr1_2:70843443-70843462 | Msa0089370:CDS | 40.0% | |
| CTCTTGTAATACGTGGAACT+GGG | + | chr1_2:70843444-70843463 | Msa0089370:CDS | 40.0% | |
| !! | CTTTATGAGCTCTGGAAAAC+TGG | + | chr1_2:70843467-70843486 | Msa0089370:CDS | 40.0% |
| ! | CATCAGGTTTAAAAGGCATG+TGG | + | chr1_2:70843563-70843582 | Msa0089370:intron | 40.0% |
| AACTTGTGGACATCATAGCA+AGG | + | chr1_2:70843640-70843659 | Msa0089370:CDS | 40.0% | |
| GGTTGAGAAAGGGAATCTAA+GGG | + | chr1_2:70843740-70843759 | Msa0089370:CDS | 40.0% | |
| ATTAGCTCGAATGGAAGACT+TGG | + | chr1_2:70843770-70843789 | Msa0089370:CDS | 40.0% | |
| TTAGCTCGAATGGAAGACTT+GGG | + | chr1_2:70843771-70843790 | Msa0089370:CDS | 40.0% | |
| !! | CCACCTCTTCTGGTTTAATT+TGG | - | chr1_2:70843972-70843991 | None:intergenic | 40.0% |
| CCAAATTAAACCAGAAGAGG+TGG | + | chr1_2:70843969-70843988 | Msa0089370:CDS | 40.0% | |
| AGGATAGGCACTAATAAGAG+AGG | - | chr1_2:70844089-70844108 | None:intergenic | 40.0% | |
| ATGAAACATGGCCATGACAT+TGG | + | chr1_2:70844264-70844283 | Msa0089370:intron | 40.0% | |
| TTGTTACGACTGCGAAAATG+TGG | + | chr1_2:70844325-70844344 | Msa0089370:CDS | 40.0% | |
| ACTACTTGTCCAGAGCTTAT+GGG | + | chr1_2:70844355-70844374 | Msa0089370:CDS | 40.0% | |
| GTACAGCAGTTCCATAAACA+TGG | - | chr1_2:70844405-70844424 | None:intergenic | 40.0% | |
| TGTTTATGGAACTGCTGTAC+CGG | + | chr1_2:70844405-70844424 | Msa0089370:CDS | 40.0% | |
| ! | ATCACAATGCAGCTTTTCCA+AGG | + | chr1_2:70844630-70844649 | Msa0089370:intron | 40.0% |
| GGACATGTTATTGGTATCCT+TGG | - | chr1_2:70844650-70844669 | None:intergenic | 40.0% | |
| GGTCAATTGGAGTACAATGA+GGG | - | chr1_2:70844671-70844690 | None:intergenic | 40.0% | |
| AGGTCAATTGGAGTACAATG+AGG | - | chr1_2:70844672-70844691 | None:intergenic | 40.0% | |
| GGGTTATGGTACACTTCTTA+TGG | + | chr1_2:70844718-70844737 | Msa0089370:intron | 40.0% | |
| !! | ATAGCTGTAATTTCTGGGGT+TGG | + | chr1_2:70844785-70844804 | Msa0089370:CDS | 40.0% |
| ! | AGTACTAGCTTACGGAGAAT+GGG | - | chr1_2:70845023-70845042 | None:intergenic | 40.0% |
| GTGTATACAACAGCGAATGT+AGG | - | chr1_2:70845106-70845125 | None:intergenic | 40.0% | |
| !!! | CAGTTTTAGGGTTTGGGTTG+GGG | - | chr1_2:70840253-70840272 | None:intergenic | 45.0% |
| ! | GGACGGTGCTTTCAGTTTTA+GGG | - | chr1_2:70840265-70840284 | None:intergenic | 45.0% |
| GGGAGAAACTGAATCAGTGA+TGG | - | chr1_2:70840315-70840334 | None:intergenic | 45.0% | |
| GGAGAAACTTACAGTAGCAG+AGG | - | chr1_2:70840336-70840355 | None:intergenic | 45.0% | |
| GTGCTTGGAGTTATCGAGAA+TGG | + | chr1_2:70840716-70840735 | Msa0089370:exon | 45.0% | |
| ATCGAGAATGGCAACTGCAA+TGG | + | chr1_2:70840728-70840747 | Msa0089370:exon | 45.0% | |
| AATGGTGGCAGAGGCAAAAA+AGG | + | chr1_2:70840746-70840765 | Msa0089370:CDS | 45.0% | |
| CACGTGCTTCTTCTTCACTA+AGG | - | chr1_2:70840809-70840828 | None:intergenic | 45.0% | |
| !! | GAGCGTTGAGATCAACTTTG+TGG | - | chr1_2:70840884-70840903 | None:intergenic | 45.0% |
| AACAACGGCTATTCCAGATG+CGG | - | chr1_2:70841033-70841052 | None:intergenic | 45.0% | |
| GTAGACACAAATGTTACCGG+TGG | - | chr1_2:70841096-70841115 | None:intergenic | 45.0% | |
| AACATTTGTGTCTACTGCCC+TGG | + | chr1_2:70841101-70841120 | Msa0089370:CDS | 45.0% | |
| AACCCTTATGTGCAGACAAG+AGG | + | chr1_2:70841323-70841342 | Msa0089370:CDS | 45.0% | |
| CTACCTCTTGTCTGCACATA+AGG | - | chr1_2:70841329-70841348 | None:intergenic | 45.0% | |
| CTTATGTGCAGACAAGAGGT+AGG | + | chr1_2:70841327-70841346 | Msa0089370:CDS | 45.0% | |
| GTCACAGTGTAGACAAGGTT+TGG | + | chr1_2:70841372-70841391 | Msa0089370:intron | 45.0% | |
| TGGAACTTTCATGTCCCTTC+CGG | + | chr1_2:70841512-70841531 | Msa0089370:CDS | 45.0% | |
| AAGTAATCACGGTAATCCGC+CGG | - | chr1_2:70841534-70841553 | None:intergenic | 45.0% | |
| !!! | GAGGAGTGCTTTGGACTTTT+TGG | + | chr1_2:70841731-70841750 | Msa0089370:intron | 45.0% |
| !!! | CTTTTTGGTGTTTGGACACG+TGG | + | chr1_2:70841746-70841765 | Msa0089370:intron | 45.0% |
| !!! | TTTTGGTGTTTGGACACGTG+GGG | + | chr1_2:70841748-70841767 | Msa0089370:intron | 45.0% |
| TGGGGAGAAGACTTGTAGTA+AGG | + | chr1_2:70841766-70841785 | Msa0089370:intron | 45.0% | |
| GGGGAGAAGACTTGTAGTAA+GGG | + | chr1_2:70841767-70841786 | Msa0089370:intron | 45.0% | |
| AAACGGGGCCTAAATCTTAC+AGG | + | chr1_2:70842126-70842145 | Msa0089370:intron | 45.0% | |
| AACGGGGCCTAAATCTTACA+GGG | + | chr1_2:70842127-70842146 | Msa0089370:intron | 45.0% | |
| ACTGCCGCCATGATATAAAC+TGG | + | chr1_2:70842399-70842418 | Msa0089370:intron | 45.0% | |
| AGGAGGCCAGATTATTGTCT+TGG | + | chr1_2:70842574-70842593 | Msa0089370:intron | 45.0% | |
| GGAGGCCAGATTATTGTCTT+GGG | + | chr1_2:70842575-70842594 | Msa0089370:intron | 45.0% | |
| TGAGGCCCAAGACAATAATC+TGG | - | chr1_2:70842583-70842602 | None:intergenic | 45.0% | |
| !! | CGTAAGAAAGCATTTGTCGC+AGG | - | chr1_2:70842606-70842625 | None:intergenic | 45.0% |
| GGTTGTACACGATTGGAGAT+TGG | + | chr1_2:70842625-70842644 | Msa0089370:CDS | 45.0% | |
| CAACATCCTCGTAAGTGCTT+TGG | - | chr1_2:70842654-70842673 | None:intergenic | 45.0% | |
| GTTGCTCGTGACACTAATAG+AGG | + | chr1_2:70842670-70842689 | Msa0089370:CDS | 45.0% | |
| ! | TTTTGCCTGGCTAAAGATGC+CGG | + | chr1_2:70842721-70842740 | Msa0089370:CDS | 45.0% |
| GTGACAACGTGCAGATTGAT+AGG | - | chr1_2:70842766-70842785 | None:intergenic | 45.0% | |
| AAGATATACTACCTCCGTCC+CGG | + | chr1_2:70843038-70843057 | Msa0089370:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr1_2:70843055-70843074 | None:intergenic | 45.0% | |
| !! | TGTTGGTGTTGAAAGGGACA+TGG | + | chr1_2:70843358-70843377 | Msa0089370:CDS | 45.0% |
| ! | AGTCCCTTGTTTAGAGCAGA+TGG | + | chr1_2:70843404-70843423 | Msa0089370:CDS | 45.0% |
| ! | GTCCCTTGTTTAGAGCAGAT+GGG | + | chr1_2:70843405-70843424 | Msa0089370:CDS | 45.0% |
| ! | AGCCCATCTGCTCTAAACAA+GGG | - | chr1_2:70843410-70843429 | None:intergenic | 45.0% |
| ! | AAGCCCATCTGCTCTAAACA+AGG | - | chr1_2:70843411-70843430 | None:intergenic | 45.0% |
| TACCCCACTCTTGTAATACG+TGG | + | chr1_2:70843437-70843456 | Msa0089370:CDS | 45.0% | |
| TTATCCACCTGAGCAACTTG+TGG | + | chr1_2:70843626-70843645 | Msa0089370:CDS | 45.0% | |
| ATGATGTCCACAAGTTGCTC+AGG | - | chr1_2:70843636-70843655 | None:intergenic | 45.0% | |
| CATAGCAAGGATCCTTGCAA+TGG | + | chr1_2:70843653-70843672 | Msa0089370:CDS | 45.0% | |
| ACTCTATAAACACGCGTCCA+TGG | - | chr1_2:70843684-70843703 | None:intergenic | 45.0% | |
| CGCGTGTTTATAGAGTTCAG+CGG | + | chr1_2:70843688-70843707 | Msa0089370:CDS | 45.0% | |
| GCGTGTTTATAGAGTTCAGC+GGG | + | chr1_2:70843689-70843708 | Msa0089370:CDS | 45.0% | |
| GGGTTGAGAAAGGGAATCTA+AGG | + | chr1_2:70843739-70843758 | Msa0089370:CDS | 45.0% | |
| GGAGTTAGCATTAGCTCGAA+TGG | + | chr1_2:70843761-70843780 | Msa0089370:CDS | 45.0% | |
| GTCATATGAAGATACACGGC+AGG | + | chr1_2:70844041-70844060 | Msa0089370:CDS | 45.0% | |
| TAAGAGAGGCTGAGGAAAGA+AGG | - | chr1_2:70844075-70844094 | None:intergenic | 45.0% | |
| ! | GTGTGAGTCTAGTTTGTAGC+TGG | + | chr1_2:70844144-70844163 | Msa0089370:intron | 45.0% |
| GAAGGCAAAATATGCACCAC+AGG | - | chr1_2:70844178-70844197 | None:intergenic | 45.0% | |
| AGACAGCACAACCAATGTCA+TGG | - | chr1_2:70844278-70844297 | None:intergenic | 45.0% | |
| CTTGAGCAGGATATCCTTGT+TGG | + | chr1_2:70844301-70844320 | Msa0089370:intron | 45.0% | |
| GCAGTCGTAACAAACCAACA+AGG | - | chr1_2:70844318-70844337 | None:intergenic | 45.0% | |
| ! | GCTCTGGACAAGTAGTGTTA+CGG | - | chr1_2:70844351-70844370 | None:intergenic | 45.0% |
| CACTACTTGTCCAGAGCTTA+TGG | + | chr1_2:70844354-70844373 | Msa0089370:CDS | 45.0% | |
| GAACACTTACCCATAAGCTC+TGG | - | chr1_2:70844367-70844386 | None:intergenic | 45.0% | |
| GTTCGTGAGCTCCATGTTTA+TGG | + | chr1_2:70844391-70844410 | Msa0089370:CDS | 45.0% | |
| TTCTGACAAGCTACAACACC+AGG | + | chr1_2:70844441-70844460 | Msa0089370:CDS | 45.0% | |
| TGGTACACTTCTTATGGAGG+AGG | + | chr1_2:70844724-70844743 | Msa0089370:CDS | 45.0% | |
| TACGGAGAATGGGAGGTAAT+GGG | - | chr1_2:70845013-70845032 | None:intergenic | 45.0% | |
| TTACGGAGAATGGGAGGTAA+TGG | - | chr1_2:70845014-70845033 | None:intergenic | 45.0% | |
| ! | CAGTACTAGCTTACGGAGAA+TGG | - | chr1_2:70845024-70845043 | None:intergenic | 45.0% |
| ! | GGGACGGTGCTTTCAGTTTT+AGG | - | chr1_2:70840266-70840285 | None:intergenic | 50.0% |
| GTGAGCGATAGTGTGAGGAA+GGG | - | chr1_2:70840286-70840305 | None:intergenic | 50.0% | |
| AGTGAGCGATAGTGTGAGGA+AGG | - | chr1_2:70840287-70840306 | None:intergenic | 50.0% | |
| GAAGAGTGAGCGATAGTGTG+AGG | - | chr1_2:70840291-70840310 | None:intergenic | 50.0% | |
| GAGAATGGCAACTGCAATGG+TGG | + | chr1_2:70840731-70840750 | Msa0089370:exon | 50.0% | |
| !! | CAAAAAAGGCACCACGTCCT+GGG | + | chr1_2:70840760-70840779 | Msa0089370:CDS | 50.0% |
| !! | AAAGGAGGCTTTGAAGGCCA+CGG | + | chr1_2:70840783-70840802 | Msa0089370:CDS | 50.0% |
| CTTCTTCTTCACTAAGGCCG+TGG | - | chr1_2:70840803-70840822 | None:intergenic | 50.0% | |
| CACGTGAGAGGCCATACTTA+CGG | - | chr1_2:70840923-70840942 | None:intergenic | 50.0% | |
| TTTACCAGACTCCGAACGAG+AGG | + | chr1_2:70840971-70840990 | Msa0089370:CDS | 50.0% | |
| GGGAAGAAGAACCTCTCGTT+CGG | - | chr1_2:70840985-70841004 | None:intergenic | 50.0% | |
| ! | TATTCCAGATGCGGTTCGGA+CGG | - | chr1_2:70841024-70841043 | None:intergenic | 50.0% |
| GACACAAATGTTACCGGTGG+TGG | - | chr1_2:70841093-70841112 | None:intergenic | 50.0% | |
| ATTTGTGTCTACTGCCCTGG+CGG | + | chr1_2:70841104-70841123 | Msa0089370:CDS | 50.0% | |
| CGAATTGCACGCATACTGGT+AGG | - | chr1_2:70841179-70841198 | None:intergenic | 50.0% | |
| TGCTCGAATTGCACGCATAC+TGG | - | chr1_2:70841183-70841202 | None:intergenic | 50.0% | |
| GTATGCGTGCAATTCGAGCA+AGG | + | chr1_2:70841183-70841202 | Msa0089370:CDS | 50.0% | |
| AACTTTCATGTCCCTTCCGG+CGG | + | chr1_2:70841515-70841534 | Msa0089370:CDS | 50.0% | |
| CACCTCTGCCAATGTAGAAG+AGG | + | chr1_2:70841587-70841606 | Msa0089370:CDS | 50.0% | |
| CTCTGCCAATGTAGAAGAGG+CGG | + | chr1_2:70841590-70841609 | Msa0089370:CDS | 50.0% | |
| !! | GAAAGCATTTGTCGCAGGTG+AGG | - | chr1_2:70842601-70842620 | None:intergenic | 50.0% |
| ! | TGGAGTCCAAAGCACTTACG+AGG | + | chr1_2:70842645-70842664 | Msa0089370:CDS | 50.0% |
| TGAAACCGGCATCTTTAGCC+AGG | - | chr1_2:70842729-70842748 | None:intergenic | 50.0% | |
| !! | GGCTAAAGATGCCGGTTTCA+AGG | + | chr1_2:70842729-70842748 | Msa0089370:CDS | 50.0% |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr1_2:70843247-70843266 | Msa0089370:intron | 50.0% | |
| AAATAGTACTCCCTCCGTCC+CGG | - | chr1_2:70843264-70843283 | None:intergenic | 50.0% | |
| ! | GAACTGGGCTTTATGAGCTC+TGG | + | chr1_2:70843459-70843478 | Msa0089370:CDS | 50.0% |
| !! | ATGAGCTCTGGAAAACTGGC+AGG | + | chr1_2:70843471-70843490 | Msa0089370:CDS | 50.0% |
| ATGTCCACAAGTTGCTCAGG+TGG | - | chr1_2:70843633-70843652 | None:intergenic | 50.0% | |
| TCCTTGCAATGGTACCTCCA+TGG | + | chr1_2:70843664-70843683 | Msa0089370:CDS | 50.0% | |
| !! | TCCATGGAGGTACCATTGCA+AGG | - | chr1_2:70843668-70843687 | None:intergenic | 50.0% |
| CTATAAACACGCGTCCATGG+AGG | - | chr1_2:70843681-70843700 | None:intergenic | 50.0% | |
| GCGGGATATTCCAATGCCTT+TGG | + | chr1_2:70843707-70843726 | Msa0089370:CDS | 50.0% | |
| ! | CAATGCCTTTGGTGACCTCT+GGG | + | chr1_2:70843718-70843737 | Msa0089370:CDS | 50.0% |
| ! | AATGCCTTTGGTGACCTCTG+GGG | + | chr1_2:70843719-70843738 | Msa0089370:CDS | 50.0% |
| !! | TGACCTCTGGGGTTGAGAAA+GGG | + | chr1_2:70843730-70843749 | Msa0089370:CDS | 50.0% |
| ATTCCCTTTCTCAACCCCAG+AGG | - | chr1_2:70843736-70843755 | None:intergenic | 50.0% | |
| TACCTGGATTCCAGCTTCTC+TGG | - | chr1_2:70843820-70843839 | None:intergenic | 50.0% | |
| CGAACAAGTTCCACCTCTTC+TGG | - | chr1_2:70843982-70844001 | None:intergenic | 50.0% | |
| GGCACTAATAAGAGAGGCTG+AGG | - | chr1_2:70844083-70844102 | None:intergenic | 50.0% | |
| ! | GTCTAGTTTGTAGCTGGCAC+TGG | + | chr1_2:70844150-70844169 | Msa0089370:intron | 50.0% |
| TGTGCTGTCTTCTCTTGAGC+AGG | + | chr1_2:70844288-70844307 | Msa0089370:intron | 50.0% | |
| !! | GAACTGCTGTACCGGTTCAT+GGG | + | chr1_2:70844413-70844432 | Msa0089370:CDS | 50.0% |
| TTCTTATGGAGGAGGCTGAG+CGG | + | chr1_2:70844732-70844751 | Msa0089370:CDS | 50.0% | |
| ! | ACTAGCTTACGGAGAATGGG+AGG | - | chr1_2:70845020-70845039 | None:intergenic | 50.0% |
| GTATACACGAGCTGACCGTA+TGG | + | chr1_2:70845118-70845137 | Msa0089370:three_prime_UTR | 50.0% | |
| GCGATAGTGTGAGGAAGGGA+CGG | - | chr1_2:70840282-70840301 | None:intergenic | 55.0% | |
| AACAGCAACTGCTGCAGCGA+TGG | - | chr1_2:70840463-70840482 | None:intergenic | 55.0% | |
| !! | GCAAAAAAGGCACCACGTCC+TGG | + | chr1_2:70840759-70840778 | Msa0089370:CDS | 55.0% |
| CCTTCAAAGCCTCCTTTCCC+AGG | - | chr1_2:70840780-70840799 | None:intergenic | 55.0% | |
| ! | CCTGGGAAAGGAGGCTTTGA+AGG | + | chr1_2:70840777-70840796 | Msa0089370:CDS | 55.0% |
| TCTGCTGCGTGCCGTAAGTA+TGG | + | chr1_2:70840909-70840928 | Msa0089370:CDS | 55.0% | |
| CAAGTTTGGGTGCACGTGAG+AGG | - | chr1_2:70840935-70840954 | None:intergenic | 55.0% | |
| AGAACCTCTCGTTCGGAGTC+TGG | - | chr1_2:70840978-70840997 | None:intergenic | 55.0% | |
| !! | ACGGGTTTGGCTCGGAGTTT+GGG | - | chr1_2:70841005-70841024 | None:intergenic | 55.0% |
| ! | ATTCCAGATGCGGTTCGGAC+GGG | - | chr1_2:70841023-70841042 | None:intergenic | 55.0% |
| CGGCTATTCCAGATGCGGTT+CGG | - | chr1_2:70841028-70841047 | None:intergenic | 55.0% | |
| GCAATGTGAGGGCAACGATG+AGG | - | chr1_2:70841071-70841090 | None:intergenic | 55.0% | |
| ! | TACCGGTGGTGGCAATGTGA+GGG | - | chr1_2:70841082-70841101 | None:intergenic | 55.0% |
| ! | TTACCGGTGGTGGCAATGTG+AGG | - | chr1_2:70841083-70841102 | None:intergenic | 55.0% |
| GCGTGCAATTCGAGCAAGGT+AGG | + | chr1_2:70841187-70841206 | Msa0089370:intron | 55.0% | |
| ATCACGGTAATCCGCCGGAA+GGG | - | chr1_2:70841529-70841548 | None:intergenic | 55.0% | |
| AATCACGGTAATCCGCCGGA+AGG | - | chr1_2:70841530-70841549 | None:intergenic | 55.0% | |
| CGCCTCTTCTACATTGGCAG+AGG | - | chr1_2:70841592-70841611 | None:intergenic | 55.0% | |
| CGTCACCGCCTCTTCTACAT+TGG | - | chr1_2:70841598-70841617 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr1_2:70843052-70843071 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr1_2:70843251-70843270 | Msa0089370:intron | 55.0% | |
| ! | CCAGAGGTCACCAAAGGCAT+TGG | - | chr1_2:70843720-70843739 | None:intergenic | 55.0% |
| ! | CCAATGCCTTTGGTGACCTC+TGG | + | chr1_2:70843717-70843736 | Msa0089370:CDS | 55.0% |
| TCAACCCCAGAGGTCACCAA+AGG | - | chr1_2:70843726-70843745 | None:intergenic | 55.0% | |
| !! | GTGACCTCTGGGGTTGAGAA+AGG | + | chr1_2:70843729-70843748 | Msa0089370:CDS | 55.0% |
| GATGTTCGGACCAGAGAAGC+TGG | + | chr1_2:70843807-70843826 | Msa0089370:CDS | 55.0% | |
| GACCAGAGAAGCTGGAATCC+AGG | + | chr1_2:70843815-70843834 | Msa0089370:CDS | 55.0% | |
| !! | GGAACTGCTGTACCGGTTCA+TGG | + | chr1_2:70844412-70844431 | Msa0089370:CDS | 55.0% |
| TCAGAATGCCGCCCATGAAC+CGG | - | chr1_2:70844427-70844446 | None:intergenic | 55.0% | |
| TACTCGTAACCCCCCCTCTC+TGG | + | chr1_2:70840217-70840236 | Msa0089370:five_prime_UTR | 60.0% | |
| TGCAGTCGTACCAGAGAGGG+GGG | - | chr1_2:70840230-70840249 | None:intergenic | 60.0% | |
| GTGCAGTCGTACCAGAGAGG+GGG | - | chr1_2:70840231-70840250 | None:intergenic | 60.0% | |
| GGTGCAGTCGTACCAGAGAG+GGG | - | chr1_2:70840232-70840251 | None:intergenic | 60.0% | |
| GGGTGCAGTCGTACCAGAGA+GGG | - | chr1_2:70840233-70840252 | None:intergenic | 60.0% | |
| GGCAACTGCAATGGTGGCAG+AGG | + | chr1_2:70840737-70840756 | Msa0089370:CDS | 60.0% | |
| ! | AAGGCACCACGTCCTGGGAA+AGG | + | chr1_2:70840765-70840784 | Msa0089370:CDS | 60.0% |
| AAGCCTCCTTTCCCAGGACG+TGG | - | chr1_2:70840774-70840793 | None:intergenic | 60.0% | |
| !! | GACGGGTTTGGCTCGGAGTT+TGG | - | chr1_2:70841006-70841025 | None:intergenic | 60.0% |
| ! | AGATGCGGTTCGGACGGGTT+TGG | - | chr1_2:70841018-70841037 | None:intergenic | 60.0% |
| AAACCCGTCCGAACCGCATC+TGG | + | chr1_2:70841017-70841036 | Msa0089370:CDS | 60.0% | |
| TGCCCTCACATTGCCACCAC+CGG | + | chr1_2:70841077-70841096 | Msa0089370:CDS | 60.0% | |
| AATCGGAGTCAGGACCGCCA+GGG | - | chr1_2:70841121-70841140 | None:intergenic | 60.0% | |
| AAATCGGAGTCAGGACCGCC+AGG | - | chr1_2:70841122-70841141 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr1_2:70843250-70843269 | Msa0089370:intron | 60.0% | |
| !! | GTAGCTGGCACTGGTTCCTG+TGG | + | chr1_2:70844159-70844178 | Msa0089370:intron | 60.0% |
| !! | CTGCTGTACCGGTTCATGGG+CGG | + | chr1_2:70844416-70844435 | Msa0089370:CDS | 60.0% |
| GCAGTCGTACCAGAGAGGGG+GGG | - | chr1_2:70840229-70840248 | None:intergenic | 65.0% | |
| GGGGTGCAGTCGTACCAGAG+AGG | - | chr1_2:70840234-70840253 | None:intergenic | 65.0% | |
| GCACCACGTCCTGGGAAAGG+AGG | + | chr1_2:70840768-70840787 | Msa0089370:CDS | 65.0% | |
| ! | CGGTTCGGACGGGTTTGGCT+CGG | - | chr1_2:70841013-70841032 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 70840209 | 70845178 | 70840209 | ID=Msa0089370;Name=Msa0089370 |
| chr1_2 | mRNA | 70840209 | 70845178 | 70840209 | ID=Msa0089370-mRNA-1;Parent=Msa0089370;Name=Msa0089370-mRNA-1;_AED=0.04;_eAED=0.04;_QI=228|1|1|1|0.88|0.8|10|301|563 |
| chr1_2 | exon | 70840209 | 70840343 | 70840209 | ID=Msa0089370-mRNA-1:exon:24384;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70840642 | 70841204 | 70840642 | ID=Msa0089370-mRNA-1:exon:24385;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70841319 | 70841388 | 70841319 | ID=Msa0089370-mRNA-1:exon:24386;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70841492 | 70841664 | 70841492 | ID=Msa0089370-mRNA-1:exon:24387;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70842576 | 70842750 | 70842576 | ID=Msa0089370-mRNA-1:exon:24388;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70843326 | 70843492 | 70843326 | ID=Msa0089370-mRNA-1:exon:24389;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70843617 | 70843836 | 70843617 | ID=Msa0089370-mRNA-1:exon:24390;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70843958 | 70844062 | 70843958 | ID=Msa0089370-mRNA-1:exon:24391;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70844310 | 70844462 | 70844310 | ID=Msa0089370-mRNA-1:exon:24392;Parent=Msa0089370-mRNA-1 |
| chr1_2 | exon | 70844719 | 70845178 | 70844719 | ID=Msa0089370-mRNA-1:exon:24393;Parent=Msa0089370-mRNA-1 |
| chr1_2 | five_prime_UTR | 70840209 | 70840343 | 70840209 | ID=Msa0089370-mRNA-1:five_prime_utr;Parent=Msa0089370-mRNA-1 |
| chr1_2 | five_prime_UTR | 70840642 | 70840734 | 70840642 | ID=Msa0089370-mRNA-1:five_prime_utr;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70840735 | 70841204 | 70840735 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70841319 | 70841388 | 70841319 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70841492 | 70841664 | 70841492 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70842576 | 70842750 | 70842576 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70843326 | 70843492 | 70843326 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70843617 | 70843836 | 70843617 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70843958 | 70844062 | 70843958 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70844310 | 70844462 | 70844310 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | CDS | 70844719 | 70844877 | 70844719 | ID=Msa0089370-mRNA-1:cds;Parent=Msa0089370-mRNA-1 |
| chr1_2 | three_prime_UTR | 70844878 | 70845178 | 70844878 | ID=Msa0089370-mRNA-1:three_prime_utr;Parent=Msa0089370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
