Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091700 | XP_013468354.1 | 90.381 | 603 | 47 | 2 | 1 | 598 | 1 | 597 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091700 | sp|F4KCE9|KNL2_ARATH | 43.590 | 117 | 61 | 4 | 17 | 130 | 11 | 125 | 2.06e-20 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091700 | A0A072VLC9 | 90.381 | 603 | 47 | 2 | 1 | 598 | 1 | 597 | 0.0 | 1082 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0091700 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091700 | MtrunA17_Chr1g0182621 | 90.381 | 603 | 47 | 2 | 1 | 598 | 1 | 597 | 0.0 | 1082 |
| Msa0091700 | MtrunA17_Chr1g0182611 | 68.195 | 349 | 105 | 2 | 241 | 583 | 131 | 479 | 2.07e-150 | 442 |
| Msa0091700 | MtrunA17_Chr1g0182611 | 59.312 | 349 | 133 | 3 | 1 | 343 | 1 | 346 | 1.77e-131 | 394 |
| Msa0091700 | MtrunA17_Chr7g0231611 | 38.028 | 142 | 71 | 6 | 1 | 133 | 1 | 134 | 5.37e-17 | 82.8 |
| Msa0091700 | MtrunA17_Chr5g0416851 | 38.028 | 142 | 71 | 6 | 1 | 133 | 1 | 134 | 7.47e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0091700 | AT5G02520.2 | 43.590 | 117 | 61 | 4 | 17 | 130 | 11 | 125 | 2.00e-21 | 99.0 |
| Msa0091700 | AT5G02520.2 | 45.205 | 73 | 39 | 1 | 527 | 598 | 519 | 591 | 9.85e-11 | 65.1 |
| Msa0091700 | AT5G02520.1 | 43.590 | 117 | 61 | 4 | 17 | 130 | 11 | 125 | 2.10e-21 | 99.0 |
| Msa0091700 | AT5G02520.3 | 43.590 | 117 | 61 | 4 | 17 | 130 | 11 | 125 | 3.27e-21 | 98.2 |
| Msa0091700 | AT1G58210.1 | 36.522 | 115 | 64 | 3 | 5 | 114 | 41 | 151 | 2.51e-15 | 77.0 |
Find 151 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGAATCAGTACCGGTTTC+TGG | 0.134199 | 1_2:-73859252 | None:intergenic |
| TTACCATCAGATAATATTTC+TGG | 0.175942 | 1_2:-73860170 | None:intergenic |
| TTACCATCAAATGATATTTC+TGG | 0.188236 | 1_2:-73859757 | None:intergenic |
| AATGGAGTCTTGCAATTCTC+TGG | 0.210078 | 1_2:-73859490 | None:intergenic |
| CAGTAGCAGGTTGCTTCTTC+TGG | 0.230387 | 1_2:-73860488 | None:intergenic |
| CATATGCAGGCTGCTTCTTC+TGG | 0.231464 | 1_2:-73860043 | None:intergenic |
| CAATTCTCTGGGGCCTCTTC+AGG | 0.246287 | 1_2:-73859478 | None:intergenic |
| TTCTACCTCCCTTAGAGTTT+TGG | 0.256165 | 1_2:+73861128 | Msa0091700:CDS |
| TCTTTATCTGGATGTGTTGC+AGG | 0.273995 | 1_2:-73860516 | None:intergenic |
| AGATTTGCTGGTACATTATC+AGG | 0.278683 | 1_2:-73859733 | None:intergenic |
| ATTGGAAAATTTACCAGATC+TGG | 0.281653 | 1_2:-73860877 | None:intergenic |
| TGATTCGGGCAATGCTGTTT+TGG | 0.283336 | 1_2:+73859266 | Msa0091700:CDS |
| GATATTTCTGGAAGATTTGC+TGG | 0.294734 | 1_2:-73859745 | None:intergenic |
| AAATTCTGTTCCTACGTCTT+TGG | 0.304145 | 1_2:+73859890 | Msa0091700:CDS |
| TCACATACCATGTTATAAAT+AGG | 0.311211 | 1_2:-73861163 | None:intergenic |
| ACATATCTTGTTCATCTTCA+AGG | 0.335841 | 1_2:-73859938 | None:intergenic |
| CCGTGAGATTACAGAAATTC+AGG | 0.340294 | 1_2:+73861262 | Msa0091700:CDS |
| TTGATTGCGCCAAAACTCTA+AGG | 0.343897 | 1_2:-73861137 | None:intergenic |
| AGATTCGTTGATACATTATC+AGG | 0.360747 | 1_2:-73860146 | None:intergenic |
| GTAGAGCTCTGCTCTTTCTC+TGG | 0.362481 | 1_2:-73860083 | None:intergenic |
| CTTCCAGAAATATCATTTGA+TGG | 0.363684 | 1_2:+73859754 | Msa0091700:CDS |
| GGAAGAGTAAACACAATGTC+TGG | 0.368000 | 1_2:+73860618 | Msa0091700:CDS |
| GCAGAGATCTGGTCTTTATC+TGG | 0.371673 | 1_2:-73860528 | None:intergenic |
| TGAGACTTTGCATTCATCTC+CGG | 0.373003 | 1_2:-73859515 | None:intergenic |
| GGTTGTGGAAAATCATGATT+TGG | 0.381883 | 1_2:+73860112 | Msa0091700:CDS |
| CCAGAAACCGGTACTGATTC+GGG | 0.383266 | 1_2:+73859252 | Msa0091700:CDS |
| AATGATGAAGAGCCTCTAAA+AGG | 0.383621 | 1_2:-73861305 | None:intergenic |
| ACCAGAAACCGGTACTGATT+CGG | 0.393560 | 1_2:+73859251 | Msa0091700:CDS |
| ACATATCCCGTTCATCTTTG+AGG | 0.399307 | 1_2:-73860383 | None:intergenic |
| CCTTCTTCCGAACCTCAGTT+AGG | 0.412158 | 1_2:-73861459 | None:intergenic |
| AAACAGTGCACACTGGATAA+TGG | 0.412705 | 1_2:+73859027 | Msa0091700:CDS |
| GTTGATATTGCTTGTGGTAG+TGG | 0.415196 | 1_2:+73859553 | Msa0091700:CDS |
| AGGATTTAACATTATGCATC+CGG | 0.417454 | 1_2:-73860464 | None:intergenic |
| GGGTGTGCAATTAGAAGAAC+TGG | 0.418914 | 1_2:-73858356 | None:intergenic |
| ATGGAGTCTTGCAATTCTCT+GGG | 0.433444 | 1_2:-73859489 | None:intergenic |
| ATTCAGGGAAGAAGCGGTTC+GGG | 0.436156 | 1_2:+73858912 | Msa0091700:intron |
| TCCTACTTCTTTGTTATCAC+CGG | 0.437184 | 1_2:+73860329 | Msa0091700:CDS |
| GATTCAGGGAAGAAGCGGTT+CGG | 0.441206 | 1_2:+73858911 | Msa0091700:intron |
| TTTAGAGGCTCTTCATCATT+GGG | 0.442092 | 1_2:+73861308 | Msa0091700:CDS |
| GATCTCTGCCTCAGCAGCCT+TGG | 0.442994 | 1_2:+73860542 | Msa0091700:CDS |
| GACCATGGGAGATCGCAATA+AGG | 0.444355 | 1_2:+73860356 | Msa0091700:CDS |
| CAGAAGAAGCAACCTGCTAC+TGG | 0.444849 | 1_2:+73860489 | Msa0091700:CDS |
| AGTGAGGTCAACGATGTTCA+TGG | 0.449119 | 1_2:+73859972 | Msa0091700:CDS |
| GGCACTCCTCAAAGATGAAC+GGG | 0.449784 | 1_2:+73860377 | Msa0091700:CDS |
| AACACCCGTTCAATCACAAA+AGG | 0.455345 | 1_2:+73860596 | Msa0091700:CDS |
| GTCAATGTTGTTCATGGTAG+TGG | 0.459300 | 1_2:+73860423 | Msa0091700:CDS |
| CAGAAGAAGCAGCCTGCATA+TGG | 0.461694 | 1_2:+73860044 | Msa0091700:CDS |
| GAGACTTTGCATTCATCTCC+GGG | 0.467675 | 1_2:-73859514 | None:intergenic |
| CGATCTCCCATGGTCTTATC+CGG | 0.467896 | 1_2:-73860348 | None:intergenic |
| GGTAGGGTCAATGTTGTTCA+TGG | 0.469284 | 1_2:+73860417 | Msa0091700:CDS |
| TTGCATTCATCTCCGGGGAA+TGG | 0.473283 | 1_2:-73859508 | None:intergenic |
| ACGGCCTTTGAGGTAGAGCT+TGG | 0.476441 | 1_2:-73859682 | None:intergenic |
| GAGCTCTACCTTGAAGGTTG+TGG | 0.482477 | 1_2:+73860097 | Msa0091700:CDS |
| GAACGGTTACATTATACGAT+TGG | 0.482529 | 1_2:+73858407 | Msa0091700:CDS |
| CTCGATGTAGGATGCTGCTT+CGG | 0.487404 | 1_2:-73859631 | None:intergenic |
| AGGCTGCTGAGGCAGAGATC+TGG | 0.487795 | 1_2:-73860539 | None:intergenic |
| GTGTGAATGAATGCGATGTT+TGG | 0.488330 | 1_2:-73858316 | None:intergenic |
| TTATCAGGAACAACAGTATC+CGG | 0.501961 | 1_2:-73859718 | None:intergenic |
| TTCTTCTTGCTTCCAACGAA+CGG | 0.503942 | 1_2:+73858390 | Msa0091700:CDS |
| TCTTTCTCTGGATTCTTGAG+AGG | 0.504491 | 1_2:-73860071 | None:intergenic |
| GGCCGTCGAAAATCATGATC+CGG | 0.505332 | 1_2:+73859699 | Msa0091700:CDS |
| AGAGCAGAGCTCTACCTTGA+AGG | 0.508453 | 1_2:+73860091 | Msa0091700:CDS |
| ACTAATACCTAACTGAGGTT+CGG | 0.516102 | 1_2:+73861452 | Msa0091700:three_prime_UTR |
| GTCAACGATGTTCATGGCAG+TGG | 0.517162 | 1_2:+73859978 | Msa0091700:CDS |
| AGTCCTTAGTACTATGCAAC+CGG | 0.517646 | 1_2:-73860019 | None:intergenic |
| GAGGCTCTTCATCATTGGGC+AGG | 0.522623 | 1_2:+73861312 | Msa0091700:CDS |
| TGCCTTATTGCGATCTCCCA+TGG | 0.525598 | 1_2:-73860358 | None:intergenic |
| ACCGGCCACTACGTCTAGTC+CGG | 0.527410 | 1_2:-73860001 | None:intergenic |
| CGTATAATGTAACCGTTCGT+TGG | 0.528108 | 1_2:-73858402 | None:intergenic |
| AGCATTGCCCGAATCAGTAC+CGG | 0.533197 | 1_2:-73859259 | None:intergenic |
| GTTAGAGAACAACCAGAAAC+CGG | 0.534072 | 1_2:+73859240 | Msa0091700:CDS |
| CGGTTACATTATACGATTGG+TGG | 0.540059 | 1_2:+73858410 | Msa0091700:CDS |
| TTGAGAGGATCTCCATATGC+AGG | 0.543432 | 1_2:-73860056 | None:intergenic |
| GGAAATGACTGATGGAGGAC+TGG | 0.545081 | 1_2:+73860563 | Msa0091700:CDS |
| GACTTTAATATTATGCAACC+TGG | 0.548218 | 1_2:-73859593 | None:intergenic |
| TATCAAGGAACTTTCTCTGA+CGG | 0.548904 | 1_2:+73859306 | Msa0091700:CDS |
| AGACGCCGGAGATGGCTAAA+CGG | 0.549320 | 1_2:-73858462 | None:intergenic |
| TCAGGCAATACCGACGAAGT+AGG | 0.550175 | 1_2:-73859460 | None:intergenic |
| GTTGAAGAGAAATAAGTCAG+AGG | 0.551672 | 1_2:-73858294 | None:intergenic |
| AGCAGGTTGCTTCTTCTGGT+AGG | 0.553452 | 1_2:-73860484 | None:intergenic |
| CCTGAATTTCTGTAATCTCA+CGG | 0.553835 | 1_2:-73861262 | None:intergenic |
| TGGCCGGTTGCATAGTACTA+AGG | 0.554205 | 1_2:+73860016 | Msa0091700:CDS |
| AAGTCTCAAAGAAGATGAGT+GGG | 0.555389 | 1_2:+73859530 | Msa0091700:CDS |
| ACGATGTTCATGGCAGTGGC+CGG | 0.558626 | 1_2:+73859982 | Msa0091700:CDS |
| AACCACCGTTTAGCCATCTC+CGG | 0.558688 | 1_2:+73858457 | Msa0091700:CDS |
| GTTGCAGGATCTCCAGTAGC+AGG | 0.559749 | 1_2:-73860501 | None:intergenic |
| GCAGCCTTGGAAATGACTGA+TGG | 0.560856 | 1_2:+73860555 | Msa0091700:CDS |
| TGTGGAAGAGACGCCGGAGA+TGG | 0.563212 | 1_2:-73858470 | None:intergenic |
| AGACTCTCTCTCACGCTGTA+CGG | 0.564022 | 1_2:-73858266 | None:intergenic |
| GCGGGAATAGACGTAGTGCC+CGG | 0.565247 | 1_2:+73860445 | Msa0091700:CDS |
| AGTAAACACAATGTCTGGGC+AGG | 0.565926 | 1_2:+73860623 | Msa0091700:CDS |
| TCCGGTGATAACAAAGAAGT+AGG | 0.566020 | 1_2:-73860330 | None:intergenic |
| TTGAGAGGACCTCTCGATGT+AGG | 0.566402 | 1_2:-73859643 | None:intergenic |
| CGGGATATGTCAATTAAGAC+GGG | 0.568225 | 1_2:+73860396 | Msa0091700:CDS |
| ACGGGATATGTCAATTAAGA+CGG | 0.571346 | 1_2:+73860395 | Msa0091700:CDS |
| ATATGTCAATTAAGACGGGT+AGG | 0.573298 | 1_2:+73860400 | Msa0091700:CDS |
| AATTGCAAGACTCCATTCCC+CGG | 0.573734 | 1_2:+73859496 | Msa0091700:CDS |
| CTGTAAAATCTCCTCAAGGA+AGG | 0.576048 | 1_2:+73860778 | Msa0091700:CDS |
| TCTTCATCTGAACGCTTGAG+AGG | 0.576282 | 1_2:-73859658 | None:intergenic |
| AGTGGGGTTGATATTGCTTG+TGG | 0.577027 | 1_2:+73859547 | Msa0091700:CDS |
| CAATACCGACGAAGTAGGAA+TGG | 0.577162 | 1_2:-73859455 | None:intergenic |
| GAATGTAAGTCACTCAAACA+AGG | 0.580926 | 1_2:+73860800 | Msa0091700:CDS |
| TGACTTACATTCCTTCCTTG+AGG | 0.581463 | 1_2:-73860789 | None:intergenic |
| GGATTTAACATTATGCATCC+GGG | 0.586374 | 1_2:-73860463 | None:intergenic |
| ATGTTGTTCATGGTAGTGGC+GGG | 0.588592 | 1_2:+73860427 | Msa0091700:CDS |
| AGTCATTTCCAAGGCTGCTG+AGG | 0.594162 | 1_2:-73860550 | None:intergenic |
| CTTCCAGAAATATTATCTGA+TGG | 0.594536 | 1_2:+73860167 | Msa0091700:CDS |
| GAAGAGTAAACACAATGTCT+GGG | 0.597995 | 1_2:+73860619 | Msa0091700:CDS |
| CATTAATAAACAGTGCACAC+TGG | 0.598333 | 1_2:+73859020 | Msa0091700:CDS |
| ACACCCGTTCAATCACAAAA+GGG | 0.599424 | 1_2:+73860597 | Msa0091700:CDS |
| AGAGAAATAAGTCAGAGGAG+AGG | 0.599649 | 1_2:-73858289 | None:intergenic |
| TCCTCCATCAGTCATTTCCA+AGG | 0.602323 | 1_2:-73860559 | None:intergenic |
| AGGCACTCCTCAAAGATGAA+CGG | 0.602783 | 1_2:+73860376 | Msa0091700:CDS |
| AATGTTGTTCATGGTAGTGG+CGG | 0.603017 | 1_2:+73860426 | Msa0091700:CDS |
| TGATTGCGCCAAAACTCTAA+GGG | 0.604798 | 1_2:-73861136 | None:intergenic |
| GTTATCACCGGATAAGACCA+TGG | 0.605592 | 1_2:+73860341 | Msa0091700:CDS |
| TGGAAGCAAGAAGAAGAAGA+AGG | 0.606225 | 1_2:-73858382 | None:intergenic |
| AATGTAAGTCACTCAAACAA+GGG | 0.606573 | 1_2:+73860801 | Msa0091700:CDS |
| GCCTTGGAAATGACTGATGG+AGG | 0.606817 | 1_2:+73860558 | Msa0091700:CDS |
| GTTTCCCTTGAGACTGTCGA+TGG | 0.607459 | 1_2:+73858973 | Msa0091700:CDS |
| ATATACCATCGACAGTCTCA+AGG | 0.611734 | 1_2:-73858978 | None:intergenic |
| AAAGTCCATTCCTACTTCGT+CGG | 0.616794 | 1_2:+73859450 | Msa0091700:CDS |
| GTTGTGATTCAGGGAAGAAG+CGG | 0.620242 | 1_2:+73858906 | Msa0091700:intron |
| AGAGCCAAGCTCTACCTCAA+AGG | 0.621891 | 1_2:+73859678 | Msa0091700:CDS |
| AAAGTCTCAAAGAAGATGAG+TGG | 0.624361 | 1_2:+73859529 | Msa0091700:CDS |
| TATGTCAATTAAGACGGGTA+GGG | 0.624553 | 1_2:+73860401 | Msa0091700:CDS |
| TTATCACCGGATAAGACCAT+GGG | 0.624895 | 1_2:+73860342 | Msa0091700:CDS |
| TTACTTTGTGGAAGAGACGC+CGG | 0.624985 | 1_2:-73858476 | None:intergenic |
| TATTATCAAAAGATATGATG+AGG | 0.626070 | 1_2:+73858951 | Msa0091700:CDS |
| TCTTCTGTAAAATCTCCTCA+AGG | 0.626237 | 1_2:+73860774 | Msa0091700:CDS |
| TTCGTCGGTATTGCCTGAAG+AGG | 0.626897 | 1_2:+73859465 | Msa0091700:CDS |
| AGAGATACTTACGCAAAACA+AGG | 0.634085 | 1_2:-73861405 | None:intergenic |
| TATACCATCGACAGTCTCAA+GGG | 0.636705 | 1_2:-73858977 | None:intergenic |
| CAATGACTCTGGAGAAACTG+TGG | 0.637102 | 1_2:-73860841 | None:intergenic |
| GCCGGACTAGACGTAGTGGC+CGG | 0.638720 | 1_2:+73860000 | Msa0091700:CDS |
| TCAACAACCTATTTATAACA+TGG | 0.640146 | 1_2:+73861156 | Msa0091700:CDS |
| GAGATTACAGAAATTCAGGA+AGG | 0.641599 | 1_2:+73861266 | Msa0091700:CDS |
| GGCGACAATTGAAACAGAAG+CGG | 0.644820 | 1_2:+73860719 | Msa0091700:CDS |
| TGGCTCGTTAAATCATGTCA+AGG | 0.652527 | 1_2:+73858430 | Msa0091700:CDS |
| TGGAGTCTTGCAATTCTCTG+GGG | 0.655923 | 1_2:-73859488 | None:intergenic |
| CATCGCATTCATTCACACAA+TGG | 0.658461 | 1_2:+73858321 | Msa0091700:exon |
| AAGCAGCATCCTACATCGAG+AGG | 0.662773 | 1_2:+73859634 | Msa0091700:CDS |
| TATGTCAATTAAGATGAGTG+AGG | 0.667369 | 1_2:+73859956 | Msa0091700:CDS |
| AGTGGCCGGACTAGACGTAG+TGG | 0.687139 | 1_2:+73859996 | Msa0091700:CDS |
| CGCCGGAGATGGCTAAACGG+TGG | 0.689679 | 1_2:-73858459 | None:intergenic |
| AGACTTTGCATTCATCTCCG+GGG | 0.700085 | 1_2:-73859513 | None:intergenic |
| TTGCGCCAAAACTCTAAGGG+AGG | 0.703796 | 1_2:-73861133 | None:intergenic |
| TTCTCACTAATACCTAACTG+AGG | 0.705745 | 1_2:+73861447 | Msa0091700:three_prime_UTR |
| AGTCTCAAAGAAGATGAGTG+GGG | 0.750570 | 1_2:+73859531 | Msa0091700:CDS |
| TCTCTCGTGACCAAAGACGT+AGG | 0.753414 | 1_2:-73859900 | None:intergenic |
| GGTGTGCAATTAGAAGAACT+GGG | 0.781722 | 1_2:-73858355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATACTTTTTGTTAATTTCAT+CGG | + | chr1_2:73858681-73858700 | Msa0091700:intron | 15.0% |
| !!! | ATTTTCAAGAGTTTTTTATT+TGG | + | chr1_2:73859180-73859199 | Msa0091700:CDS | 15.0% |
| !!! | TTTTTTCTTATAACATCTTT+TGG | - | chr1_2:73860697-73860716 | None:intergenic | 15.0% |
| !! | AAAGATGTTATAAGAAAAAA+AGG | + | chr1_2:73860697-73860716 | Msa0091700:CDS | 15.0% |
| !! | AAGATGTTATAAGAAAAAAA+GGG | + | chr1_2:73860698-73860717 | Msa0091700:CDS | 15.0% |
| !! | TGTAAAAAAAAAACAATGAT+TGG | - | chr1_2:73860898-73860917 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTCATAGATGAAG+TGG | + | chr1_2:73858234-73858253 | Msa0091700:five_prime_UTR | 20.0% |
| !!! | TTTTTTTTCATAGATGAAGT+GGG | + | chr1_2:73858235-73858254 | Msa0091700:five_prime_UTR | 20.0% |
| !! | GTTAACACTAAACTATAAAT+TGG | + | chr1_2:73858742-73858761 | Msa0091700:intron | 20.0% |
| !! | AAATATAAAAACAGTTACTG+TGG | + | chr1_2:73858853-73858872 | Msa0091700:intron | 20.0% |
| !!! | TCATCATATCTTTTGATAAT+AGG | - | chr1_2:73858952-73858971 | None:intergenic | 20.0% |
| !! | TATTATCAAAAGATATGATG+AGG | + | chr1_2:73858951-73858970 | Msa0091700:CDS | 20.0% |
| !!! | ATGGTATATATGTTTTGATT+AGG | + | chr1_2:73858992-73859011 | Msa0091700:CDS | 20.0% |
| !!! | TGGTATATATGTTTTGATTA+GGG | + | chr1_2:73858993-73859012 | Msa0091700:CDS | 20.0% |
| !! | AAAAAAACAAAAATCCATCA+GGG | - | chr1_2:73859142-73859161 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTCTTCTATTTCA+TGG | + | chr1_2:73859153-73859172 | Msa0091700:intron | 20.0% |
| !!! | AATGAATTTGCATTTTATCA+AGG | + | chr1_2:73859291-73859310 | Msa0091700:CDS | 20.0% |
| !!! | GTTTTATTAATTTTTGTAGC+AGG | + | chr1_2:73859421-73859440 | Msa0091700:intron | 20.0% |
| !! | TATTAAGATATAGAAACTGT+AGG | - | chr1_2:73860275-73860294 | None:intergenic | 20.0% |
| !!! | GGTTTAATAATTTTTCTCTT+AGG | - | chr1_2:73860750-73860769 | None:intergenic | 20.0% |
| !! | GAGTGTATATATTATCAATT+AGG | - | chr1_2:73860966-73860985 | None:intergenic | 20.0% |
| !! | TTTACTCTATTCTTTATGTT+TGG | + | chr1_2:73861084-73861103 | Msa0091700:intron | 20.0% |
| !! | TTACTCTATTCTTTATGTTT+GGG | + | chr1_2:73861085-73861104 | Msa0091700:intron | 20.0% |
| !!! | GAGAATTTTTTAAGTTAGTT+GGG | - | chr1_2:73861432-73861451 | None:intergenic | 20.0% |
| !!! | TGAGAATTTTTTAAGTTAGT+TGG | - | chr1_2:73861433-73861452 | None:intergenic | 20.0% |
| ! | TTCTGATTCAACAAGATTAT+TGG | - | chr1_2:73858567-73858586 | None:intergenic | 25.0% |
| ! | AATCTTGTTGAATCAGAAAT+TGG | + | chr1_2:73858569-73858588 | Msa0091700:intron | 25.0% |
| !!! | AGTATTAAGTATTGAAAGTC+AGG | - | chr1_2:73858666-73858685 | None:intergenic | 25.0% |
| !!! | ATCGGTTTTGAATTTATGTT+TGG | + | chr1_2:73858699-73858718 | Msa0091700:intron | 25.0% |
| ! | ACATTTAATGTTGTGATTCA+GGG | + | chr1_2:73858897-73858916 | Msa0091700:intron | 25.0% |
| !!! | ATATCTTTTGATAATAGGAG+CGG | - | chr1_2:73858947-73858966 | None:intergenic | 25.0% |
| !!! | GGTATATATGTTTTGATTAG+GGG | + | chr1_2:73858994-73859013 | Msa0091700:CDS | 25.0% |
| !! | TTCATAAGTGTCAATGTTTT+TGG | + | chr1_2:73859070-73859089 | Msa0091700:intron | 25.0% |
| !! | TTGCAAGATATTGTTGATAA+TGG | + | chr1_2:73859102-73859121 | Msa0091700:intron | 25.0% |
| ! | AAAAAACAAAAATCCATCAG+GGG | - | chr1_2:73859141-73859160 | None:intergenic | 25.0% |
| ! | GAAAAAAACAAAAATCCATC+AGG | - | chr1_2:73859143-73859162 | None:intergenic | 25.0% |
| ! | TTACCATCAAATGATATTTC+TGG | - | chr1_2:73859760-73859779 | None:intergenic | 25.0% |
| ! | TTACCATCAGATAATATTTC+TGG | - | chr1_2:73860173-73860192 | None:intergenic | 25.0% |
| ! | CTTCATGAATAAACAATGAT+TGG | - | chr1_2:73860928-73860947 | None:intergenic | 25.0% |
| ! | AAAAATGCTAACAATAGCAT+TGG | - | chr1_2:73861036-73861055 | None:intergenic | 25.0% |
| !! | ATTGTTAGCATTTTTGTACA+TGG | + | chr1_2:73861041-73861060 | Msa0091700:intron | 25.0% |
| !!! | TTATGTTTGGGTTATTTTGT+AGG | + | chr1_2:73861097-73861116 | Msa0091700:intron | 25.0% |
| ! | TCAACAACCTATTTATAACA+TGG | + | chr1_2:73861156-73861175 | Msa0091700:CDS | 25.0% |
| ! | TCACATACCATGTTATAAAT+AGG | - | chr1_2:73861166-73861185 | None:intergenic | 25.0% |
| GTTACTTGAGTTAATCGTAT+AGG | + | chr1_2:73858593-73858612 | Msa0091700:intron | 30.0% | |
| !! | AAGTATTGAAAGTCAGGTTT+GGG | - | chr1_2:73858660-73858679 | None:intergenic | 30.0% |
| !! | TAAGTATTGAAAGTCAGGTT+TGG | - | chr1_2:73858661-73858680 | None:intergenic | 30.0% |
| CACATTTAATGTTGTGATTC+AGG | + | chr1_2:73858896-73858915 | Msa0091700:intron | 30.0% | |
| ACACTTATGAATACAAACCT+GGG | - | chr1_2:73859061-73859080 | None:intergenic | 30.0% | |
| !!! | ATAAGTGTCAATGTTTTTGG+TGG | + | chr1_2:73859073-73859092 | Msa0091700:intron | 30.0% |
| !!! | TATTTGGCTTTTCTGAAAAC+TGG | + | chr1_2:73859196-73859215 | Msa0091700:CDS | 30.0% |
| !!! | ATTTGGCTTTTCTGAAAACT+GGG | + | chr1_2:73859197-73859216 | Msa0091700:CDS | 30.0% |
| GACGGTAAATATTTCGATAA+TGG | + | chr1_2:73859324-73859343 | Msa0091700:intron | 30.0% | |
| ! | ATTAATTTTTGTAGCAGGTG+AGG | + | chr1_2:73859426-73859445 | Msa0091700:intron | 30.0% |
| GACTTTAATATTATGCAACC+TGG | - | chr1_2:73859596-73859615 | None:intergenic | 30.0% | |
| CTTCCAGAAATATCATTTGA+TGG | + | chr1_2:73859754-73859773 | Msa0091700:CDS | 30.0% | |
| TACTAAGATATAGAGACTGT+AGG | - | chr1_2:73859845-73859864 | None:intergenic | 30.0% | |
| ACATATCTTGTTCATCTTCA+AGG | - | chr1_2:73859941-73859960 | None:intergenic | 30.0% | |
| TATGTCAATTAAGATGAGTG+AGG | + | chr1_2:73859956-73859975 | Msa0091700:CDS | 30.0% | |
| AGATTCGTTGATACATTATC+AGG | - | chr1_2:73860149-73860168 | None:intergenic | 30.0% | |
| CTTCCAGAAATATTATCTGA+TGG | + | chr1_2:73860167-73860186 | Msa0091700:CDS | 30.0% | |
| GATATAGAAACTGTAGGTAT+AGG | - | chr1_2:73860269-73860288 | None:intergenic | 30.0% | |
| AGGATTTAACATTATGCATC+CGG | - | chr1_2:73860467-73860486 | None:intergenic | 30.0% | |
| !!! | TGAAAAGGTTTTGGAAATTC+TGG | - | chr1_2:73860667-73860686 | None:intergenic | 30.0% |
| !!! | TCTTTTGGTTTTTGCTGAAA+AGG | - | chr1_2:73860682-73860701 | None:intergenic | 30.0% |
| AATGTAAGTCACTCAAACAA+GGG | + | chr1_2:73860801-73860820 | Msa0091700:CDS | 30.0% | |
| !!! | TTTTTTAGACTCAATGACTC+TGG | - | chr1_2:73860855-73860874 | None:intergenic | 30.0% |
| AGTCTAAAAAAATCCAGATC+TGG | + | chr1_2:73860864-73860883 | Msa0091700:CDS | 30.0% | |
| ATTGGAAAATTTACCAGATC+TGG | - | chr1_2:73860880-73860899 | None:intergenic | 30.0% | |
| TAGATTGTAAATCTTCCAGT+AGG | - | chr1_2:73861201-73861220 | None:intergenic | 30.0% | |
| ! | TCTTTGATATCACCTTTTAG+AGG | + | chr1_2:73861293-73861312 | Msa0091700:CDS | 30.0% |
| GTTGAAGAGAAATAAGTCAG+AGG | - | chr1_2:73858297-73858316 | None:intergenic | 35.0% | |
| GAACGGTTACATTATACGAT+TGG | + | chr1_2:73858407-73858426 | Msa0091700:CDS | 35.0% | |
| TGACGAGAATACTTACTTTG+TGG | - | chr1_2:73858491-73858510 | None:intergenic | 35.0% | |
| GCTTTACTAGAAACAATGTC+AGG | + | chr1_2:73858626-73858645 | Msa0091700:intron | 35.0% | |
| ! | TCAAGCTAATGCAAAAGCAT+AGG | + | chr1_2:73858787-73858806 | Msa0091700:intron | 35.0% |
| CATTAATAAACAGTGCACAC+TGG | + | chr1_2:73859020-73859039 | Msa0091700:CDS | 35.0% | |
| CACTTATGAATACAAACCTG+GGG | - | chr1_2:73859060-73859079 | None:intergenic | 35.0% | |
| GACACTTATGAATACAAACC+TGG | - | chr1_2:73859062-73859081 | None:intergenic | 35.0% | |
| TATCAAGGAACTTTCTCTGA+CGG | + | chr1_2:73859306-73859325 | Msa0091700:CDS | 35.0% | |
| AAAGTCTCAAAGAAGATGAG+TGG | + | chr1_2:73859529-73859548 | Msa0091700:CDS | 35.0% | |
| AAGTCTCAAAGAAGATGAGT+GGG | + | chr1_2:73859530-73859549 | Msa0091700:CDS | 35.0% | |
| GTAAAAATAGACGTAGTACC+AGG | + | chr1_2:73859575-73859594 | Msa0091700:CDS | 35.0% | |
| TTATCAGGAACAACAGTATC+CGG | - | chr1_2:73859721-73859740 | None:intergenic | 35.0% | |
| !! | AGATTTGCTGGTACATTATC+AGG | - | chr1_2:73859736-73859755 | None:intergenic | 35.0% |
| !! | GATATTTCTGGAAGATTTGC+TGG | - | chr1_2:73859748-73859767 | None:intergenic | 35.0% |
| GATATAGAGACTGTAGGTAT+AGG | - | chr1_2:73859839-73859858 | None:intergenic | 35.0% | |
| TTTAATTGTTGTCGCAGCTT+TGG | + | chr1_2:73859866-73859885 | Msa0091700:intron | 35.0% | |
| AAATTCTGTTCCTACGTCTT+TGG | + | chr1_2:73859890-73859909 | Msa0091700:CDS | 35.0% | |
| ! | ATGATTTTCCACAACCTTCA+AGG | - | chr1_2:73860108-73860127 | None:intergenic | 35.0% |
| GGTTGTGGAAAATCATGATT+TGG | + | chr1_2:73860112-73860131 | Msa0091700:CDS | 35.0% | |
| ! | TCCTACTTCTTTGTTATCAC+CGG | + | chr1_2:73860329-73860348 | Msa0091700:CDS | 35.0% |
| ACGGGATATGTCAATTAAGA+CGG | + | chr1_2:73860395-73860414 | Msa0091700:CDS | 35.0% | |
| ATATGTCAATTAAGACGGGT+AGG | + | chr1_2:73860400-73860419 | Msa0091700:CDS | 35.0% | |
| TATGTCAATTAAGACGGGTA+GGG | + | chr1_2:73860401-73860420 | Msa0091700:CDS | 35.0% | |
| GGATTTAACATTATGCATCC+GGG | - | chr1_2:73860466-73860485 | None:intergenic | 35.0% | |
| ! | TCTTCCCTTTTGTGATTGAA+CGG | - | chr1_2:73860604-73860623 | None:intergenic | 35.0% |
| GAAGAGTAAACACAATGTCT+GGG | + | chr1_2:73860619-73860638 | Msa0091700:CDS | 35.0% | |
| ! | GGTTTTTGCTGAAAAGGTTT+TGG | - | chr1_2:73860676-73860695 | None:intergenic | 35.0% |
| TCTTCTGTAAAATCTCCTCA+AGG | + | chr1_2:73860774-73860793 | Msa0091700:CDS | 35.0% | |
| GAATGTAAGTCACTCAAACA+AGG | + | chr1_2:73860800-73860819 | Msa0091700:CDS | 35.0% | |
| !! | GTTTGGGTTATTTTGTAGGA+AGG | + | chr1_2:73861101-73861120 | Msa0091700:intron | 35.0% |
| TGATATCTTCAACAACCTAC+TGG | + | chr1_2:73861183-73861202 | Msa0091700:intron | 35.0% | |
| ! | CTTTTTACATTTTACCGTCC+AGG | + | chr1_2:73861238-73861257 | Msa0091700:intron | 35.0% |
| CCTGAATTTCTGTAATCTCA+CGG | - | chr1_2:73861265-73861284 | None:intergenic | 35.0% | |
| GAGATTACAGAAATTCAGGA+AGG | + | chr1_2:73861266-73861285 | Msa0091700:CDS | 35.0% | |
| AATGATGAAGAGCCTCTAAA+AGG | - | chr1_2:73861308-73861327 | None:intergenic | 35.0% | |
| !! | TTTTAGAGGCTCTTCATCAT+TGG | + | chr1_2:73861307-73861326 | Msa0091700:CDS | 35.0% |
| TTTAGAGGCTCTTCATCATT+GGG | + | chr1_2:73861308-73861327 | Msa0091700:CDS | 35.0% | |
| AGAGATACTTACGCAAAACA+AGG | - | chr1_2:73861408-73861427 | None:intergenic | 35.0% | |
| TTCTCACTAATACCTAACTG+AGG | + | chr1_2:73861447-73861466 | Msa0091700:three_prime_UTR | 35.0% | |
| AGAGAAATAAGTCAGAGGAG+AGG | - | chr1_2:73858292-73858311 | None:intergenic | 40.0% | |
| GTGTGAATGAATGCGATGTT+TGG | - | chr1_2:73858319-73858338 | None:intergenic | 40.0% | |
| CATCGCATTCATTCACACAA+TGG | + | chr1_2:73858321-73858340 | Msa0091700:exon | 40.0% | |
| GGTGTGCAATTAGAAGAACT+GGG | - | chr1_2:73858358-73858377 | None:intergenic | 40.0% | |
| ! | CAAGAAGAAGAAGAAGGTGT+GGG | - | chr1_2:73858379-73858398 | None:intergenic | 40.0% |
| TGGAAGCAAGAAGAAGAAGA+AGG | - | chr1_2:73858385-73858404 | None:intergenic | 40.0% | |
| TTCTTCTTGCTTCCAACGAA+CGG | + | chr1_2:73858390-73858409 | Msa0091700:CDS | 40.0% | |
| CGTATAATGTAACCGTTCGT+TGG | - | chr1_2:73858405-73858424 | None:intergenic | 40.0% | |
| CGGTTACATTATACGATTGG+TGG | + | chr1_2:73858410-73858429 | Msa0091700:CDS | 40.0% | |
| TGGCTCGTTAAATCATGTCA+AGG | + | chr1_2:73858430-73858449 | Msa0091700:CDS | 40.0% | |
| AGTAGAACAAAGAAGCAAGC+AGG | - | chr1_2:73858537-73858556 | None:intergenic | 40.0% | |
| TATACCATCGACAGTCTCAA+GGG | - | chr1_2:73858980-73858999 | None:intergenic | 40.0% | |
| ATATACCATCGACAGTCTCA+AGG | - | chr1_2:73858981-73859000 | None:intergenic | 40.0% | |
| AAACAGTGCACACTGGATAA+TGG | + | chr1_2:73859027-73859046 | Msa0091700:CDS | 40.0% | |
| GTTAGAGAACAACCAGAAAC+CGG | + | chr1_2:73859240-73859259 | Msa0091700:CDS | 40.0% | |
| AAAGTCCATTCCTACTTCGT+CGG | + | chr1_2:73859450-73859469 | Msa0091700:CDS | 40.0% | |
| ATGGAGTCTTGCAATTCTCT+GGG | - | chr1_2:73859492-73859511 | None:intergenic | 40.0% | |
| AATGGAGTCTTGCAATTCTC+TGG | - | chr1_2:73859493-73859512 | None:intergenic | 40.0% | |
| TGAGACTTTGCATTCATCTC+CGG | - | chr1_2:73859518-73859537 | None:intergenic | 40.0% | |
| AGTCTCAAAGAAGATGAGTG+GGG | + | chr1_2:73859531-73859550 | Msa0091700:CDS | 40.0% | |
| GTTGATATTGCTTGTGGTAG+TGG | + | chr1_2:73859553-73859572 | Msa0091700:CDS | 40.0% | |
| ! | ATCCGGATCATGATTTTCGA+CGG | - | chr1_2:73859704-73859723 | None:intergenic | 40.0% |
| AGTCCTTAGTACTATGCAAC+CGG | - | chr1_2:73860022-73860041 | None:intergenic | 40.0% | |
| TCTTTCTCTGGATTCTTGAG+AGG | - | chr1_2:73860074-73860093 | None:intergenic | 40.0% | |
| TCCGGTGATAACAAAGAAGT+AGG | - | chr1_2:73860333-73860352 | None:intergenic | 40.0% | |
| TTATCACCGGATAAGACCAT+GGG | + | chr1_2:73860342-73860361 | Msa0091700:CDS | 40.0% | |
| ACATATCCCGTTCATCTTTG+AGG | - | chr1_2:73860386-73860405 | None:intergenic | 40.0% | |
| CGGGATATGTCAATTAAGAC+GGG | + | chr1_2:73860396-73860415 | Msa0091700:CDS | 40.0% | |
| GTCAATGTTGTTCATGGTAG+TGG | + | chr1_2:73860423-73860442 | Msa0091700:CDS | 40.0% | |
| !! | AATGTTGTTCATGGTAGTGG+CGG | + | chr1_2:73860426-73860445 | Msa0091700:CDS | 40.0% |
| TCTTTATCTGGATGTGTTGC+AGG | - | chr1_2:73860519-73860538 | None:intergenic | 40.0% | |
| AACACCCGTTCAATCACAAA+AGG | + | chr1_2:73860596-73860615 | Msa0091700:CDS | 40.0% | |
| ACACCCGTTCAATCACAAAA+GGG | + | chr1_2:73860597-73860616 | Msa0091700:CDS | 40.0% | |
| ! | CTTCCCTTTTGTGATTGAAC+GGG | - | chr1_2:73860603-73860622 | None:intergenic | 40.0% |
| GGAAGAGTAAACACAATGTC+TGG | + | chr1_2:73860618-73860637 | Msa0091700:CDS | 40.0% | |
| ! | GGAGATTTTACAGAAGATGC+AGG | - | chr1_2:73860771-73860790 | None:intergenic | 40.0% |
| CTGTAAAATCTCCTCAAGGA+AGG | + | chr1_2:73860778-73860797 | Msa0091700:CDS | 40.0% | |
| TGACTTACATTCCTTCCTTG+AGG | - | chr1_2:73860792-73860811 | None:intergenic | 40.0% | |
| !! | TGGGTTATTTTGTAGGAAGG+TGG | + | chr1_2:73861104-73861123 | Msa0091700:intron | 40.0% |
| ! | TTCTACCTCCCTTAGAGTTT+TGG | + | chr1_2:73861128-73861147 | Msa0091700:CDS | 40.0% |
| TGATTGCGCCAAAACTCTAA+GGG | - | chr1_2:73861139-73861158 | None:intergenic | 40.0% | |
| TTGATTGCGCCAAAACTCTA+AGG | - | chr1_2:73861140-73861159 | None:intergenic | 40.0% | |
| CCGTGAGATTACAGAAATTC+AGG | + | chr1_2:73861262-73861281 | Msa0091700:CDS | 40.0% | |
| GGGTGTGCAATTAGAAGAAC+TGG | - | chr1_2:73858359-73858378 | None:intergenic | 45.0% | |
| GCAAGAAGAAGAAGAAGGTG+TGG | - | chr1_2:73858380-73858399 | None:intergenic | 45.0% | |
| TTACTTTGTGGAAGAGACGC+CGG | - | chr1_2:73858479-73858498 | None:intergenic | 45.0% | |
| GAACAAAGAAGCAAGCAGGT+GGG | - | chr1_2:73858533-73858552 | None:intergenic | 45.0% | |
| AGAACAAAGAAGCAAGCAGG+TGG | - | chr1_2:73858534-73858553 | None:intergenic | 45.0% | |
| GTTGTGATTCAGGGAAGAAG+CGG | + | chr1_2:73858906-73858925 | Msa0091700:intron | 45.0% | |
| !! | GGATAATGGTTTTACTCCCC+AGG | + | chr1_2:73859041-73859060 | Msa0091700:CDS | 45.0% |
| TGTTTCATTGCTACCCCTGA+TGG | + | chr1_2:73859125-73859144 | Msa0091700:intron | 45.0% | |
| !! | ACCAGAAACCGGTACTGATT+CGG | + | chr1_2:73859251-73859270 | Msa0091700:CDS | 45.0% |
| !! | TGATTCGGGCAATGCTGTTT+TGG | + | chr1_2:73859266-73859285 | Msa0091700:CDS | 45.0% |
| CAATACCGACGAAGTAGGAA+TGG | - | chr1_2:73859458-73859477 | None:intergenic | 45.0% | |
| TGGAGTCTTGCAATTCTCTG+GGG | - | chr1_2:73859491-73859510 | None:intergenic | 45.0% | |
| AATTGCAAGACTCCATTCCC+CGG | + | chr1_2:73859496-73859515 | Msa0091700:CDS | 45.0% | |
| AGACTTTGCATTCATCTCCG+GGG | - | chr1_2:73859516-73859535 | None:intergenic | 45.0% | |
| GAGACTTTGCATTCATCTCC+GGG | - | chr1_2:73859517-73859536 | None:intergenic | 45.0% | |
| !! | AGTGGGGTTGATATTGCTTG+TGG | + | chr1_2:73859547-73859566 | Msa0091700:CDS | 45.0% |
| TCTTCATCTGAACGCTTGAG+AGG | - | chr1_2:73859661-73859680 | None:intergenic | 45.0% | |
| ! | ATGATTTTCGACGGCCTTTG+AGG | - | chr1_2:73859695-73859714 | None:intergenic | 45.0% |
| AGTGAGGTCAACGATGTTCA+TGG | + | chr1_2:73859972-73859991 | Msa0091700:CDS | 45.0% | |
| TTGAGAGGATCTCCATATGC+AGG | - | chr1_2:73860059-73860078 | None:intergenic | 45.0% | |
| TTCAAATGTTGTCGCAGCTG+TGG | + | chr1_2:73860296-73860315 | Msa0091700:intron | 45.0% | |
| GTTATCACCGGATAAGACCA+TGG | + | chr1_2:73860341-73860360 | Msa0091700:CDS | 45.0% | |
| AGGCACTCCTCAAAGATGAA+CGG | + | chr1_2:73860376-73860395 | Msa0091700:CDS | 45.0% | |
| GGTAGGGTCAATGTTGTTCA+TGG | + | chr1_2:73860417-73860436 | Msa0091700:CDS | 45.0% | |
| !! | ATGTTGTTCATGGTAGTGGC+GGG | + | chr1_2:73860427-73860446 | Msa0091700:CDS | 45.0% |
| ! | GCAGAGATCTGGTCTTTATC+TGG | - | chr1_2:73860531-73860550 | None:intergenic | 45.0% |
| TCCTCCATCAGTCATTTCCA+AGG | - | chr1_2:73860562-73860581 | None:intergenic | 45.0% | |
| AGTAAACACAATGTCTGGGC+AGG | + | chr1_2:73860623-73860642 | Msa0091700:CDS | 45.0% | |
| GGCGACAATTGAAACAGAAG+CGG | + | chr1_2:73860719-73860738 | Msa0091700:CDS | 45.0% | |
| ! | CAATGACTCTGGAGAAACTG+TGG | - | chr1_2:73860844-73860863 | None:intergenic | 45.0% |
| !! | TAGCATTGGCTGAGAAGTGT+TGG | - | chr1_2:73861022-73861041 | None:intergenic | 45.0% |
| TTTCTGTAATCTCACGGTCC+TGG | - | chr1_2:73861259-73861278 | None:intergenic | 45.0% | |
| AGACTCTCTCTCACGCTGTA+CGG | - | chr1_2:73858269-73858288 | None:intergenic | 50.0% | |
| AACCACCGTTTAGCCATCTC+CGG | + | chr1_2:73858457-73858476 | Msa0091700:CDS | 50.0% | |
| GATTCAGGGAAGAAGCGGTT+CGG | + | chr1_2:73858911-73858930 | Msa0091700:intron | 50.0% | |
| ATTCAGGGAAGAAGCGGTTC+GGG | + | chr1_2:73858912-73858931 | Msa0091700:intron | 50.0% | |
| GTTTCCCTTGAGACTGTCGA+TGG | + | chr1_2:73858973-73858992 | Msa0091700:CDS | 50.0% | |
| !! | CCAGAAACCGGTACTGATTC+GGG | + | chr1_2:73859252-73859271 | Msa0091700:CDS | 50.0% |
| AGCATTGCCCGAATCAGTAC+CGG | - | chr1_2:73859262-73859281 | None:intergenic | 50.0% | |
| TCAGGCAATACCGACGAAGT+AGG | - | chr1_2:73859463-73859482 | None:intergenic | 50.0% | |
| TTCGTCGGTATTGCCTGAAG+AGG | + | chr1_2:73859465-73859484 | Msa0091700:CDS | 50.0% | |
| TTGCATTCATCTCCGGGGAA+TGG | - | chr1_2:73859511-73859530 | None:intergenic | 50.0% | |
| ! | CTCGATGTAGGATGCTGCTT+CGG | - | chr1_2:73859634-73859653 | None:intergenic | 50.0% |
| AAGCAGCATCCTACATCGAG+AGG | + | chr1_2:73859634-73859653 | Msa0091700:CDS | 50.0% | |
| TTGAGAGGACCTCTCGATGT+AGG | - | chr1_2:73859646-73859665 | None:intergenic | 50.0% | |
| AGAGCCAAGCTCTACCTCAA+AGG | + | chr1_2:73859678-73859697 | Msa0091700:CDS | 50.0% | |
| GGCCGTCGAAAATCATGATC+CGG | + | chr1_2:73859699-73859718 | Msa0091700:CDS | 50.0% | |
| TCTCTCGTGACCAAAGACGT+AGG | - | chr1_2:73859903-73859922 | None:intergenic | 50.0% | |
| GTCAACGATGTTCATGGCAG+TGG | + | chr1_2:73859978-73859997 | Msa0091700:CDS | 50.0% | |
| TGGCCGGTTGCATAGTACTA+AGG | + | chr1_2:73860016-73860035 | Msa0091700:CDS | 50.0% | |
| CATATGCAGGCTGCTTCTTC+TGG | - | chr1_2:73860046-73860065 | None:intergenic | 50.0% | |
| CAGAAGAAGCAGCCTGCATA+TGG | + | chr1_2:73860044-73860063 | Msa0091700:CDS | 50.0% | |
| GTAGAGCTCTGCTCTTTCTC+TGG | - | chr1_2:73860086-73860105 | None:intergenic | 50.0% | |
| AGAGCAGAGCTCTACCTTGA+AGG | + | chr1_2:73860091-73860110 | Msa0091700:CDS | 50.0% | |
| GAGCTCTACCTTGAAGGTTG+TGG | + | chr1_2:73860097-73860116 | Msa0091700:CDS | 50.0% | |
| !! | CGATCTCCCATGGTCTTATC+CGG | - | chr1_2:73860351-73860370 | None:intergenic | 50.0% |
| GACCATGGGAGATCGCAATA+AGG | + | chr1_2:73860356-73860375 | Msa0091700:CDS | 50.0% | |
| ! | TGCCTTATTGCGATCTCCCA+TGG | - | chr1_2:73860361-73860380 | None:intergenic | 50.0% |
| GGCACTCCTCAAAGATGAAC+GGG | + | chr1_2:73860377-73860396 | Msa0091700:CDS | 50.0% | |
| AGCAGGTTGCTTCTTCTGGT+AGG | - | chr1_2:73860487-73860506 | None:intergenic | 50.0% | |
| CAGTAGCAGGTTGCTTCTTC+TGG | - | chr1_2:73860491-73860510 | None:intergenic | 50.0% | |
| CAGAAGAAGCAACCTGCTAC+TGG | + | chr1_2:73860489-73860508 | Msa0091700:CDS | 50.0% | |
| AGTCATTTCCAAGGCTGCTG+AGG | - | chr1_2:73860553-73860572 | None:intergenic | 50.0% | |
| GCAGCCTTGGAAATGACTGA+TGG | + | chr1_2:73860555-73860574 | Msa0091700:CDS | 50.0% | |
| GCCTTGGAAATGACTGATGG+AGG | + | chr1_2:73860558-73860577 | Msa0091700:CDS | 50.0% | |
| GGAAATGACTGATGGAGGAC+TGG | + | chr1_2:73860563-73860582 | Msa0091700:CDS | 50.0% | |
| ! | TTGCGCCAAAACTCTAAGGG+AGG | - | chr1_2:73861136-73861155 | None:intergenic | 50.0% |
| TGTAATCTCACGGTCCTGGA+CGG | - | chr1_2:73861255-73861274 | None:intergenic | 50.0% | |
| AGACGCCGGAGATGGCTAAA+CGG | - | chr1_2:73858465-73858484 | None:intergenic | 55.0% | |
| !! | CCCGAATCAGTACCGGTTTC+TGG | - | chr1_2:73859255-73859274 | None:intergenic | 55.0% |
| !! | CAATTCTCTGGGGCCTCTTC+AGG | - | chr1_2:73859481-73859500 | None:intergenic | 55.0% |
| !! | ACGGCCTTTGAGGTAGAGCT+TGG | - | chr1_2:73859685-73859704 | None:intergenic | 55.0% |
| ACGATGTTCATGGCAGTGGC+CGG | + | chr1_2:73859982-73860001 | Msa0091700:CDS | 55.0% | |
| GTTGCAGGATCTCCAGTAGC+AGG | - | chr1_2:73860504-73860523 | None:intergenic | 55.0% | |
| GAGGCTCTTCATCATTGGGC+AGG | + | chr1_2:73861312-73861331 | Msa0091700:CDS | 55.0% | |
| TGTGGAAGAGACGCCGGAGA+TGG | - | chr1_2:73858473-73858492 | None:intergenic | 60.0% | |
| ! | AGTGGCCGGACTAGACGTAG+TGG | + | chr1_2:73859996-73860015 | Msa0091700:CDS | 60.0% |
| ACCGGCCACTACGTCTAGTC+CGG | - | chr1_2:73860004-73860023 | None:intergenic | 60.0% | |
| GCGGGAATAGACGTAGTGCC+CGG | + | chr1_2:73860445-73860464 | Msa0091700:CDS | 60.0% | |
| AGGCTGCTGAGGCAGAGATC+TGG | - | chr1_2:73860542-73860561 | None:intergenic | 60.0% | |
| GATCTCTGCCTCAGCAGCCT+TGG | + | chr1_2:73860542-73860561 | Msa0091700:CDS | 60.0% | |
| CGCCGGAGATGGCTAAACGG+TGG | - | chr1_2:73858462-73858481 | None:intergenic | 65.0% | |
| ! | GCCGGACTAGACGTAGTGGC+CGG | + | chr1_2:73860000-73860019 | Msa0091700:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 73858224 | 73861474 | 73858224 | ID=Msa0091700;Name=Msa0091700 |
| chr1_2 | mRNA | 73858224 | 73861474 | 73858224 | ID=Msa0091700-mRNA-1;Parent=Msa0091700;Name=Msa0091700-mRNA-1;_AED=0.12;_eAED=0.12;_QI=116|1|1|1|1|1|8|122|603 |
| chr1_2 | exon | 73858224 | 73858494 | 73858224 | ID=Msa0091700-mRNA-1:exon:25970;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73858918 | 73859062 | 73858918 | ID=Msa0091700-mRNA-1:exon:25971;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73859180 | 73859327 | 73859180 | ID=Msa0091700-mRNA-1:exon:25972;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73859443 | 73859775 | 73859443 | ID=Msa0091700-mRNA-1:exon:25973;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73859883 | 73860188 | 73859883 | ID=Msa0091700-mRNA-1:exon:25974;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73860313 | 73860885 | 73860313 | ID=Msa0091700-mRNA-1:exon:25975;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73861119 | 73861177 | 73861119 | ID=Msa0091700-mRNA-1:exon:25976;Parent=Msa0091700-mRNA-1 |
| chr1_2 | exon | 73861260 | 73861474 | 73861260 | ID=Msa0091700-mRNA-1:exon:25977;Parent=Msa0091700-mRNA-1 |
| chr1_2 | five_prime_UTR | 73858224 | 73858339 | 73858224 | ID=Msa0091700-mRNA-1:five_prime_utr;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73858340 | 73858494 | 73858340 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73858918 | 73859062 | 73858918 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73859180 | 73859327 | 73859180 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73859443 | 73859775 | 73859443 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73859883 | 73860188 | 73859883 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73860313 | 73860885 | 73860313 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73861119 | 73861177 | 73861119 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | CDS | 73861260 | 73861352 | 73861260 | ID=Msa0091700-mRNA-1:cds;Parent=Msa0091700-mRNA-1 |
| chr1_2 | three_prime_UTR | 73861353 | 73861474 | 73861353 | ID=Msa0091700-mRNA-1:three_prime_utr;Parent=Msa0091700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
