Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092840 | G7J8D2 | 85.010 | 507 | 44 | 7 | 1 | 488 | 5 | 498 | 0.0 | 847 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0092840 | TF | RWP-RK |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092840 | MtrunA17_Chr3g0136081 | 81.250 | 528 | 46 | 7 | 1 | 488 | 5 | 519 | 0.0 | 833 |
| Msa0092840 | MtrunA17_Chr3g0105711 | 50.991 | 555 | 181 | 15 | 1 | 487 | 10 | 541 | 5.04e-156 | 454 |
| Msa0092840 | MtrunA17_Chr5g0406901 | 50.725 | 69 | 32 | 1 | 383 | 451 | 199 | 265 | 2.70e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0092840 | AT5G16100.2 | 32.721 | 272 | 128 | 11 | 248 | 472 | 177 | 440 | 4.31e-33 | 130 |
Find 101 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTCTGTGGGGCCATC+TGG | 0.198703 | 1_2:-75635454 | None:intergenic |
| GGCAATACATTGGAATTAAA+TGG | 0.208227 | 1_2:-75633987 | None:intergenic |
| TTCCAACTCCATGAAGATTT+TGG | 0.209996 | 1_2:-75633866 | None:intergenic |
| AATCTTATTCAAAATAATTC+AGG | 0.275363 | 1_2:+75634980 | Msa0092840:CDS |
| ACCACAATGTTTAATCATTT+CGG | 0.280881 | 1_2:-75635668 | None:intergenic |
| CACCATCAGATACCTGTTAA+TGG | 0.281140 | 1_2:+75634652 | Msa0092840:CDS |
| TTTGAAAAGCTTGAGATTCA+TGG | 0.294484 | 1_2:+75634601 | Msa0092840:CDS |
| TTGGATTGATGATATTAATA+TGG | 0.313839 | 1_2:+75634955 | Msa0092840:CDS |
| CTTGGTGGTAGTAATAATAA+TGG | 0.330532 | 1_2:+75633957 | Msa0092840:CDS |
| ACCATCAGATACCTGTTAAT+GGG | 0.352749 | 1_2:+75634653 | Msa0092840:CDS |
| ACTGATGGGGCCCCATTAAC+AGG | 0.356308 | 1_2:-75634664 | None:intergenic |
| GGGGTCCATGCTGAGTTTGT+TGG | 0.358398 | 1_2:-75633842 | None:intergenic |
| TGATCTGCTGCTTCATCAAT+AGG | 0.368145 | 1_2:-75635372 | None:intergenic |
| TACTATGGACTTGGAATACT+TGG | 0.370161 | 1_2:+75633939 | Msa0092840:CDS |
| GGGTCCATGCTGAGTTTGTT+GGG | 0.371034 | 1_2:-75633841 | None:intergenic |
| CAAGAGCAAATGGGTGATAA+TGG | 0.372132 | 1_2:+75635164 | Msa0092840:CDS |
| CCATCCCAAGAAAATTACTA+TGG | 0.379676 | 1_2:+75633924 | Msa0092840:CDS |
| CTCTTTGCACTGGATTGGAT+TGG | 0.394071 | 1_2:+75634936 | Msa0092840:CDS |
| AAAACGGGAATCTGAATTGC+AGG | 0.401372 | 1_2:-75634362 | None:intergenic |
| GTTTAATCATTTCGGTTTGA+AGG | 0.403646 | 1_2:-75635660 | None:intergenic |
| TCAAATTACTAGCAAATCAA+TGG | 0.407732 | 1_2:+75635587 | Msa0092840:CDS |
| TCTTATGTTTACAGATGAAT+TGG | 0.410262 | 1_2:+75635136 | Msa0092840:intron |
| TCGGTTTGGTTCAACAAAAC+GGG | 0.413527 | 1_2:-75634377 | None:intergenic |
| TTGATTAAGTGCCCGCAGTT+CGG | 0.413996 | 1_2:-75634396 | None:intergenic |
| TTCGGTTTGGTTCAACAAAA+CGG | 0.419751 | 1_2:-75634378 | None:intergenic |
| GATTCTAAATTGTAAGCAAA+TGG | 0.423137 | 1_2:-75634038 | None:intergenic |
| GTAATTTGATCTGCTTCAAA+AGG | 0.424097 | 1_2:-75635573 | None:intergenic |
| TGAGACTCTTTGCACTGGAT+TGG | 0.424222 | 1_2:+75634931 | Msa0092840:CDS |
| CAAGAAAATTACTATGGACT+TGG | 0.426462 | 1_2:+75633930 | Msa0092840:CDS |
| GATAAATCTGCTAGTGTTGT+TGG | 0.428775 | 1_2:-75633777 | None:intergenic |
| ACCTTTCTGTGGGGCCATCT+GGG | 0.433450 | 1_2:-75635453 | None:intergenic |
| GGACCCCACCAAAATCTTCA+TGG | 0.435855 | 1_2:+75633858 | Msa0092840:CDS |
| ATGAACTACCATCCACTTCA+AGG | 0.439320 | 1_2:-75634307 | None:intergenic |
| TATTCATATTGAAGAAAGTT+GGG | 0.441269 | 1_2:-75633752 | None:intergenic |
| CCATGATATTCAACAAGGTC+AGG | 0.445114 | 1_2:+75634121 | Msa0092840:CDS |
| TCATATTGATCTTGAACCAT+TGG | 0.458294 | 1_2:-75634248 | None:intergenic |
| AAGAAAACTTGTCGTAAAGC+AGG | 0.469657 | 1_2:+75635426 | Msa0092840:CDS |
| CCTGACCTTGTTGAATATCA+TGG | 0.476020 | 1_2:-75634121 | None:intergenic |
| CACCAAAATCTTCATGGAGT+TGG | 0.477847 | 1_2:+75633864 | Msa0092840:CDS |
| TAAGTGCCCGCAGTTCGGTT+TGG | 0.482116 | 1_2:-75634391 | None:intergenic |
| ACTTGTTCTGAGAGGTTCCT+AGG | 0.487950 | 1_2:-75635191 | None:intergenic |
| TTATTCATATTGAAGAAAGT+TGG | 0.488611 | 1_2:-75633753 | None:intergenic |
| AGGCAAGGGCAAGGACTGAA+GGG | 0.491007 | 1_2:+75635626 | Msa0092840:CDS |
| AGCAAATCAATGGGAAGGAC+AGG | 0.496313 | 1_2:+75635597 | Msa0092840:CDS |
| ATTGGTGGAGCAAGAGCAAA+TGG | 0.500485 | 1_2:+75635154 | Msa0092840:CDS |
| CAAATTACTAGCAAATCAAT+GGG | 0.500638 | 1_2:+75635588 | Msa0092840:CDS |
| TATCGCTGCTGCGGCTAAAG+TGG | 0.502806 | 1_2:-75635733 | None:intergenic |
| TATGTTTACAGATGAATTGG+TGG | 0.515772 | 1_2:+75635139 | Msa0092840:intron |
| AACTGCGGGCACTTAATCAA+TGG | 0.515958 | 1_2:+75634399 | Msa0092840:CDS |
| GAGGCAAGGGCAAGGACTGA+AGG | 0.520542 | 1_2:+75635625 | Msa0092840:CDS |
| TCAATCATTTGATAAACTGA+TGG | 0.522363 | 1_2:-75634679 | None:intergenic |
| GTCTCATAAAATTCAGACAT+TGG | 0.526543 | 1_2:-75634914 | None:intergenic |
| CAATCATTTGATAAACTGAT+GGG | 0.528489 | 1_2:-75634678 | None:intergenic |
| TTACCACTCTGATTCTGTTG+TGG | 0.528506 | 1_2:-75634008 | None:intergenic |
| GCTTGAGATTCATGGAAGGT+TGG | 0.532570 | 1_2:+75634609 | Msa0092840:CDS |
| TGGAATAAATAGCCTTGAAG+TGG | 0.539422 | 1_2:+75634295 | Msa0092840:CDS |
| GTTGAACCAAACCGAACTGC+GGG | 0.542214 | 1_2:+75634385 | Msa0092840:CDS |
| ATAAATCTGCTAGTGTTGTT+GGG | 0.542463 | 1_2:-75633776 | None:intergenic |
| TATGGACTTGGAATACTTGG+TGG | 0.542573 | 1_2:+75633942 | Msa0092840:CDS |
| CTGCGGCTAAAGTGGCAAGA+AGG | 0.552292 | 1_2:-75635725 | None:intergenic |
| ATTGAAGAAAGTTGGGTCAA+CGG | 0.554503 | 1_2:-75633745 | None:intergenic |
| ACCCAGATGGCCCCACAGAA+AGG | 0.563782 | 1_2:+75635452 | Msa0092840:CDS |
| CCCCATTAACAGGTATCTGA+TGG | 0.567348 | 1_2:-75634654 | None:intergenic |
| GTAAAGCAGGGTTACCCAGA+TGG | 0.568095 | 1_2:+75635439 | Msa0092840:CDS |
| TGTGTGGAACGTCATTTAGC+AGG | 0.571153 | 1_2:+75634872 | Msa0092840:CDS |
| AGTTTGTTGGGACAGTGCAG+TGG | 0.571941 | 1_2:-75633829 | None:intergenic |
| GTCCATGTTGTTGTACATCA+TGG | 0.572620 | 1_2:-75634190 | None:intergenic |
| AGAAAACTTGTCGTAAAGCA+GGG | 0.586540 | 1_2:+75635427 | Msa0092840:CDS |
| CGGCTAAAGTGGCAAGAAGG+CGG | 0.587716 | 1_2:-75635722 | None:intergenic |
| ATTCTGTTGTGGCAATACAT+TGG | 0.591773 | 1_2:-75633997 | None:intergenic |
| CACCATGATGTACAACAACA+TGG | 0.591982 | 1_2:+75634188 | Msa0092840:CDS |
| AGGACAGGATACAGAGGCAA+GGG | 0.593438 | 1_2:+75635612 | Msa0092840:CDS |
| GATATTCAACAAGGTCAGGA+TGG | 0.598749 | 1_2:+75634125 | Msa0092840:CDS |
| ATAAATAGCCTTGAAGTGGA+TGG | 0.603975 | 1_2:+75634299 | Msa0092840:CDS |
| GAAATGATTAAACATTGTGG+TGG | 0.607415 | 1_2:+75635670 | Msa0092840:CDS |
| TGAATATCATGGTAAATGAA+CGG | 0.610177 | 1_2:-75634110 | None:intergenic |
| ACCGAAATGATTAAACATTG+TGG | 0.612061 | 1_2:+75635667 | Msa0092840:CDS |
| CCATCAGATACCTGTTAATG+GGG | 0.617286 | 1_2:+75634654 | Msa0092840:CDS |
| AAAAGCTTGAGATTCATGGA+AGG | 0.617730 | 1_2:+75634605 | Msa0092840:CDS |
| GGCAAGGGCAAGGACTGAAG+GGG | 0.618518 | 1_2:+75635627 | Msa0092840:CDS |
| TTACTAGCAAATCAATGGGA+AGG | 0.619972 | 1_2:+75635592 | Msa0092840:CDS |
| CTGTCCCAACAAACTCAGCA+TGG | 0.622021 | 1_2:+75633837 | Msa0092840:CDS |
| GTTTGTTGGGACAGTGCAGT+GGG | 0.622118 | 1_2:-75633828 | None:intergenic |
| TGTTGAACCAAACCGAACTG+CGG | 0.627319 | 1_2:+75634384 | Msa0092840:CDS |
| CAACAACATGGACATGGACA+TGG | 0.630152 | 1_2:+75634200 | Msa0092840:CDS |
| CATCATATTCAACAACTGCA+TGG | 0.630346 | 1_2:+75634074 | Msa0092840:CDS |
| AGAGAAATCATACACACTGA+TGG | 0.630751 | 1_2:+75634467 | Msa0092840:CDS |
| AAATACGGGGTTACTGTGGG+TGG | 0.632071 | 1_2:-75634422 | None:intergenic |
| GCGATGTCATACAACGCGGT+TGG | 0.634750 | 1_2:-75635700 | None:intergenic |
| AGGATACAGAGGCAAGGGCA+AGG | 0.638191 | 1_2:+75635617 | Msa0092840:CDS |
| AAGGACAGGATACAGAGGCA+AGG | 0.639471 | 1_2:+75635611 | Msa0092840:CDS |
| ATTTACCATGATATTCAACA+AGG | 0.642604 | 1_2:+75634116 | Msa0092840:CDS |
| ATATTATTACTTGTTCTGAG+AGG | 0.643167 | 1_2:-75635199 | None:intergenic |
| GATGTACAACAACATGGACA+TGG | 0.659086 | 1_2:+75634194 | Msa0092840:CDS |
| AATCATTTGATAAACTGATG+GGG | 0.687280 | 1_2:-75634677 | None:intergenic |
| TTGGTGGAGCAAGAGCAAAT+GGG | 0.694143 | 1_2:+75635155 | Msa0092840:CDS |
| ATGGGAAGGACAGGATACAG+AGG | 0.708986 | 1_2:+75635606 | Msa0092840:CDS |
| TGGGTGATAATGGAACGCCT+AGG | 0.709329 | 1_2:+75635174 | Msa0092840:CDS |
| CATATTCAACAACTGCATGG+TGG | 0.712817 | 1_2:+75634077 | Msa0092840:CDS |
| TTGCCACAACAGAATCAGAG+TGG | 0.727563 | 1_2:+75634005 | Msa0092840:CDS |
| GGCGGCGATGTCATACAACG+CGG | 0.812023 | 1_2:-75635704 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATAATAATTTTTCATT+TGG | + | chr1_2:75634275-75634294 | Msa0092840:CDS | 10.0% |
| !!! | AACAATAATAATTTTTCATT+TGG | + | chr1_2:75634275-75634294 | Msa0092840:CDS | 10.0% |
| !!! | ATTGTTGTTATTTTTATCAA+TGG | - | chr1_2:75633802-75633821 | None:intergenic | 15.0% |
| !! | TATCAAAATAATAGAAACAT+GGG | - | chr1_2:75634529-75634548 | None:intergenic | 15.0% |
| !! | ATATCAAAATAATAGAAACA+TGG | - | chr1_2:75634530-75634549 | None:intergenic | 15.0% |
| !! | AATCTTATTCAAAATAATTC+AGG | + | chr1_2:75634980-75634999 | Msa0092840:CDS | 15.0% |
| !!! | ATTGTTGTTATTTTTATCAA+TGG | - | chr1_2:75633802-75633821 | None:intergenic | 15.0% |
| !! | TATCAAAATAATAGAAACAT+GGG | - | chr1_2:75634529-75634548 | None:intergenic | 15.0% |
| !! | ATATCAAAATAATAGAAACA+TGG | - | chr1_2:75634530-75634549 | None:intergenic | 15.0% |
| !! | AATCTTATTCAAAATAATTC+AGG | + | chr1_2:75634980-75634999 | Msa0092840:CDS | 15.0% |
| !! | TATTCATATTGAAGAAAGTT+GGG | - | chr1_2:75633755-75633774 | None:intergenic | 20.0% |
| !! | TTATTCATATTGAAGAAAGT+TGG | - | chr1_2:75633756-75633775 | None:intergenic | 20.0% |
| !! | TGATAAAAATAACAACAATG+TGG | + | chr1_2:75633803-75633822 | Msa0092840:CDS | 20.0% |
| !! | GATAAAAATAACAACAATGT+GGG | + | chr1_2:75633804-75633823 | Msa0092840:CDS | 20.0% |
| !!! | TGGTAATATTGATTCATTTT+CGG | + | chr1_2:75634145-75634164 | Msa0092840:CDS | 20.0% |
| !!! | AAAAATTCTTTATTTCACCA+AGG | - | chr1_2:75634841-75634860 | None:intergenic | 20.0% |
| !!! | TGGTGAAATAAAGAATTTTT+TGG | + | chr1_2:75634841-75634860 | Msa0092840:CDS | 20.0% |
| !!! | TTGGATTGATGATATTAATA+TGG | + | chr1_2:75634955-75634974 | Msa0092840:CDS | 20.0% |
| !! | TATTCATATTGAAGAAAGTT+GGG | - | chr1_2:75633755-75633774 | None:intergenic | 20.0% |
| !! | TTATTCATATTGAAGAAAGT+TGG | - | chr1_2:75633756-75633775 | None:intergenic | 20.0% |
| !! | TGATAAAAATAACAACAATG+TGG | + | chr1_2:75633803-75633822 | Msa0092840:CDS | 20.0% |
| !! | GATAAAAATAACAACAATGT+GGG | + | chr1_2:75633804-75633823 | Msa0092840:CDS | 20.0% |
| !!! | TGGTAATATTGATTCATTTT+CGG | + | chr1_2:75634145-75634164 | Msa0092840:CDS | 20.0% |
| !!! | AAAAATTCTTTATTTCACCA+AGG | - | chr1_2:75634841-75634860 | None:intergenic | 20.0% |
| !!! | TGGTGAAATAAAGAATTTTT+TGG | + | chr1_2:75634841-75634860 | Msa0092840:CDS | 20.0% |
| !!! | TTGGATTGATGATATTAATA+TGG | + | chr1_2:75634955-75634974 | Msa0092840:CDS | 20.0% |
| !! | AAGTCCATAGTAATTTTCTT+GGG | - | chr1_2:75633931-75633950 | None:intergenic | 25.0% |
| ! | GATTCTAAATTGTAAGCAAA+TGG | - | chr1_2:75634041-75634060 | None:intergenic | 25.0% |
| !! | TGAATATGATGATCATTTTC+TGG | - | chr1_2:75634065-75634084 | None:intergenic | 25.0% |
| ! | TGAATATCATGGTAAATGAA+CGG | - | chr1_2:75634113-75634132 | None:intergenic | 25.0% |
| ! | ATTTACCATGATATTCAACA+AGG | + | chr1_2:75634116-75634135 | Msa0092840:CDS | 25.0% |
| ! | AATCATTTGATAAACTGATG+GGG | - | chr1_2:75634680-75634699 | None:intergenic | 25.0% |
| ! | CAATCATTTGATAAACTGAT+GGG | - | chr1_2:75634681-75634700 | None:intergenic | 25.0% |
| ! | TCAATCATTTGATAAACTGA+TGG | - | chr1_2:75634682-75634701 | None:intergenic | 25.0% |
| !! | AACTTTTGTAACAGTTTTTG+TGG | + | chr1_2:75634809-75634828 | Msa0092840:intron | 25.0% |
| !! | ACTTTTGTAACAGTTTTTGT+GGG | + | chr1_2:75634810-75634829 | Msa0092840:intron | 25.0% |
| ! | TCTTATGTTTACAGATGAAT+TGG | + | chr1_2:75635136-75635155 | Msa0092840:intron | 25.0% |
| !! | ATATTATTACTTGTTCTGAG+AGG | - | chr1_2:75635202-75635221 | None:intergenic | 25.0% |
| ! | TCTTGTGTGTTATACTTATT+TGG | + | chr1_2:75635485-75635504 | Msa0092840:intron | 25.0% |
| ! | AGACACATTATATTAGCAAA+AGG | - | chr1_2:75635530-75635549 | None:intergenic | 25.0% |
| ! | TCAAATTACTAGCAAATCAA+TGG | + | chr1_2:75635587-75635606 | Msa0092840:CDS | 25.0% |
| ! | CAAATTACTAGCAAATCAAT+GGG | + | chr1_2:75635588-75635607 | Msa0092840:CDS | 25.0% |
| ! | ACCACAATGTTTAATCATTT+CGG | - | chr1_2:75635671-75635690 | None:intergenic | 25.0% |
| !! | AAGTCCATAGTAATTTTCTT+GGG | - | chr1_2:75633931-75633950 | None:intergenic | 25.0% |
| ! | GATTCTAAATTGTAAGCAAA+TGG | - | chr1_2:75634041-75634060 | None:intergenic | 25.0% |
| !! | TGAATATGATGATCATTTTC+TGG | - | chr1_2:75634065-75634084 | None:intergenic | 25.0% |
| ! | TGAATATCATGGTAAATGAA+CGG | - | chr1_2:75634113-75634132 | None:intergenic | 25.0% |
| ! | ATTTACCATGATATTCAACA+AGG | + | chr1_2:75634116-75634135 | Msa0092840:CDS | 25.0% |
| ! | AATCATTTGATAAACTGATG+GGG | - | chr1_2:75634680-75634699 | None:intergenic | 25.0% |
| ! | CAATCATTTGATAAACTGAT+GGG | - | chr1_2:75634681-75634700 | None:intergenic | 25.0% |
| ! | TCAATCATTTGATAAACTGA+TGG | - | chr1_2:75634682-75634701 | None:intergenic | 25.0% |
| !! | AACTTTTGTAACAGTTTTTG+TGG | + | chr1_2:75634809-75634828 | Msa0092840:intron | 25.0% |
| !! | ACTTTTGTAACAGTTTTTGT+GGG | + | chr1_2:75634810-75634829 | Msa0092840:intron | 25.0% |
| ! | TCTTATGTTTACAGATGAAT+TGG | + | chr1_2:75635136-75635155 | Msa0092840:intron | 25.0% |
| !! | ATATTATTACTTGTTCTGAG+AGG | - | chr1_2:75635202-75635221 | None:intergenic | 25.0% |
| ! | TCTTGTGTGTTATACTTATT+TGG | + | chr1_2:75635485-75635504 | Msa0092840:intron | 25.0% |
| ! | AGACACATTATATTAGCAAA+AGG | - | chr1_2:75635530-75635549 | None:intergenic | 25.0% |
| ! | TCAAATTACTAGCAAATCAA+TGG | + | chr1_2:75635587-75635606 | Msa0092840:CDS | 25.0% |
| ! | CAAATTACTAGCAAATCAAT+GGG | + | chr1_2:75635588-75635607 | Msa0092840:CDS | 25.0% |
| ! | ACCACAATGTTTAATCATTT+CGG | - | chr1_2:75635671-75635690 | None:intergenic | 25.0% |
| ! | ATAAATCTGCTAGTGTTGTT+GGG | - | chr1_2:75633779-75633798 | None:intergenic | 30.0% |
| ! | CAAGTCCATAGTAATTTTCT+TGG | - | chr1_2:75633932-75633951 | None:intergenic | 30.0% |
| CAAGAAAATTACTATGGACT+TGG | + | chr1_2:75633930-75633949 | Msa0092840:CDS | 30.0% | |
| ! | CTTGGTGGTAGTAATAATAA+TGG | + | chr1_2:75633957-75633976 | Msa0092840:CDS | 30.0% |
| GGCAATACATTGGAATTAAA+TGG | - | chr1_2:75633990-75634009 | None:intergenic | 30.0% | |
| ! | TGAAACATTTTCTGTTCCAA+TGG | + | chr1_2:75634232-75634251 | Msa0092840:CDS | 30.0% |
| TCATATTGATCTTGAACCAT+TGG | - | chr1_2:75634251-75634270 | None:intergenic | 30.0% | |
| TGACAACAACTGCAAAAATA+CGG | - | chr1_2:75634440-75634459 | None:intergenic | 30.0% | |
| TTTGAAAAGCTTGAGATTCA+TGG | + | chr1_2:75634601-75634620 | Msa0092840:CDS | 30.0% | |
| TGTAGTACTATACTAAGACT+TGG | - | chr1_2:75634712-75634731 | None:intergenic | 30.0% | |
| GTCTCATAAAATTCAGACAT+TGG | - | chr1_2:75634917-75634936 | None:intergenic | 30.0% | |
| ! | AAAATAATTCAGGTTTGTCC+TGG | + | chr1_2:75634990-75635009 | Msa0092840:intron | 30.0% |
| ! | TCTTTTCATTCATGTGACAT+TGG | + | chr1_2:75635097-75635116 | Msa0092840:intron | 30.0% |
| ! | CTTTTCATTCATGTGACATT+GGG | + | chr1_2:75635098-75635117 | Msa0092840:intron | 30.0% |
| TATGTTTACAGATGAATTGG+TGG | + | chr1_2:75635139-75635158 | Msa0092840:intron | 30.0% | |
| TTCCTCTGTTCAATACAATA+GGG | - | chr1_2:75635303-75635322 | None:intergenic | 30.0% | |
| TTTCCTCTGTTCAATACAAT+AGG | - | chr1_2:75635304-75635323 | None:intergenic | 30.0% | |
| ! | AAAGACTTTTACCTTTCTGT+GGG | - | chr1_2:75635466-75635485 | None:intergenic | 30.0% |
| TGTGTCTTAAAATTAACGAC+AGG | + | chr1_2:75635543-75635562 | Msa0092840:intron | 30.0% | |
| GTAATTTGATCTGCTTCAAA+AGG | - | chr1_2:75635576-75635595 | None:intergenic | 30.0% | |
| ! | GTTTAATCATTTCGGTTTGA+AGG | - | chr1_2:75635663-75635682 | None:intergenic | 30.0% |
| ACCGAAATGATTAAACATTG+TGG | + | chr1_2:75635667-75635686 | Msa0092840:CDS | 30.0% | |
| GAAATGATTAAACATTGTGG+TGG | + | chr1_2:75635670-75635689 | Msa0092840:CDS | 30.0% | |
| ! | ATAAATCTGCTAGTGTTGTT+GGG | - | chr1_2:75633779-75633798 | None:intergenic | 30.0% |
| ! | CAAGTCCATAGTAATTTTCT+TGG | - | chr1_2:75633932-75633951 | None:intergenic | 30.0% |
| CAAGAAAATTACTATGGACT+TGG | + | chr1_2:75633930-75633949 | Msa0092840:CDS | 30.0% | |
| ! | CTTGGTGGTAGTAATAATAA+TGG | + | chr1_2:75633957-75633976 | Msa0092840:CDS | 30.0% |
| GGCAATACATTGGAATTAAA+TGG | - | chr1_2:75633990-75634009 | None:intergenic | 30.0% | |
| ! | TGAAACATTTTCTGTTCCAA+TGG | + | chr1_2:75634232-75634251 | Msa0092840:CDS | 30.0% |
| TCATATTGATCTTGAACCAT+TGG | - | chr1_2:75634251-75634270 | None:intergenic | 30.0% | |
| TGACAACAACTGCAAAAATA+CGG | - | chr1_2:75634440-75634459 | None:intergenic | 30.0% | |
| TTTGAAAAGCTTGAGATTCA+TGG | + | chr1_2:75634601-75634620 | Msa0092840:CDS | 30.0% | |
| TGTAGTACTATACTAAGACT+TGG | - | chr1_2:75634712-75634731 | None:intergenic | 30.0% | |
| GTCTCATAAAATTCAGACAT+TGG | - | chr1_2:75634917-75634936 | None:intergenic | 30.0% | |
| ! | AAAATAATTCAGGTTTGTCC+TGG | + | chr1_2:75634990-75635009 | Msa0092840:intron | 30.0% |
| ! | TCTTTTCATTCATGTGACAT+TGG | + | chr1_2:75635097-75635116 | Msa0092840:intron | 30.0% |
| ! | CTTTTCATTCATGTGACATT+GGG | + | chr1_2:75635098-75635117 | Msa0092840:intron | 30.0% |
| TATGTTTACAGATGAATTGG+TGG | + | chr1_2:75635139-75635158 | Msa0092840:intron | 30.0% | |
| TTCCTCTGTTCAATACAATA+GGG | - | chr1_2:75635303-75635322 | None:intergenic | 30.0% | |
| TTTCCTCTGTTCAATACAAT+AGG | - | chr1_2:75635304-75635323 | None:intergenic | 30.0% | |
| ! | AAAGACTTTTACCTTTCTGT+GGG | - | chr1_2:75635466-75635485 | None:intergenic | 30.0% |
| TGTGTCTTAAAATTAACGAC+AGG | + | chr1_2:75635543-75635562 | Msa0092840:intron | 30.0% | |
| GTAATTTGATCTGCTTCAAA+AGG | - | chr1_2:75635576-75635595 | None:intergenic | 30.0% | |
| ! | GTTTAATCATTTCGGTTTGA+AGG | - | chr1_2:75635663-75635682 | None:intergenic | 30.0% |
| ACCGAAATGATTAAACATTG+TGG | + | chr1_2:75635667-75635686 | Msa0092840:CDS | 30.0% | |
| GAAATGATTAAACATTGTGG+TGG | + | chr1_2:75635670-75635689 | Msa0092840:CDS | 30.0% | |
| ATTGAAGAAAGTTGGGTCAA+CGG | - | chr1_2:75633748-75633767 | None:intergenic | 35.0% | |
| GATAAATCTGCTAGTGTTGT+TGG | - | chr1_2:75633780-75633799 | None:intergenic | 35.0% | |
| !! | AACTCCATGAAGATTTTGGT+GGG | - | chr1_2:75633865-75633884 | None:intergenic | 35.0% |
| ! | TTCCAACTCCATGAAGATTT+TGG | - | chr1_2:75633869-75633888 | None:intergenic | 35.0% |
| ! | TAGTAATTTTCTTGGGATGG+TGG | - | chr1_2:75633924-75633943 | None:intergenic | 35.0% |
| ! | CCATAGTAATTTTCTTGGGA+TGG | - | chr1_2:75633927-75633946 | None:intergenic | 35.0% |
| CCATCCCAAGAAAATTACTA+TGG | + | chr1_2:75633924-75633943 | Msa0092840:CDS | 35.0% | |
| TACTATGGACTTGGAATACT+TGG | + | chr1_2:75633939-75633958 | Msa0092840:CDS | 35.0% | |
| ATTCTGTTGTGGCAATACAT+TGG | - | chr1_2:75634000-75634019 | None:intergenic | 35.0% | |
| CATCATATTCAACAACTGCA+TGG | + | chr1_2:75634074-75634093 | Msa0092840:CDS | 35.0% | |
| ! | TGGAATAAATAGCCTTGAAG+TGG | + | chr1_2:75634295-75634314 | Msa0092840:CDS | 35.0% |
| ! | ATAAATAGCCTTGAAGTGGA+TGG | + | chr1_2:75634299-75634318 | Msa0092840:CDS | 35.0% |
| !! | TTCGGTTTGGTTCAACAAAA+CGG | - | chr1_2:75634381-75634400 | None:intergenic | 35.0% |
| ACAACAACTGCAAAAATACG+GGG | - | chr1_2:75634438-75634457 | None:intergenic | 35.0% | |
| GACAACAACTGCAAAAATAC+GGG | - | chr1_2:75634439-75634458 | None:intergenic | 35.0% | |
| AGAGAAATCATACACACTGA+TGG | + | chr1_2:75634467-75634486 | Msa0092840:CDS | 35.0% | |
| AAAAGCTTGAGATTCATGGA+AGG | + | chr1_2:75634605-75634624 | Msa0092840:CDS | 35.0% | |
| ACCATCAGATACCTGTTAAT+GGG | + | chr1_2:75634653-75634672 | Msa0092840:CDS | 35.0% | |
| ! | TTTTATGAGACTCTTTGCAC+TGG | + | chr1_2:75634926-75634945 | Msa0092840:CDS | 35.0% |
| TACCCTATTGTATTGAACAG+AGG | + | chr1_2:75635298-75635317 | Msa0092840:intron | 35.0% | |
| ! | CAAGTTTTCTTGAGAACTGT+TGG | - | chr1_2:75635417-75635436 | None:intergenic | 35.0% |
| AAGAAAACTTGTCGTAAAGC+AGG | + | chr1_2:75635426-75635445 | Msa0092840:CDS | 35.0% | |
| AGAAAACTTGTCGTAAAGCA+GGG | + | chr1_2:75635427-75635446 | Msa0092840:CDS | 35.0% | |
| ! | AAGACTTTTACCTTTCTGTG+GGG | - | chr1_2:75635465-75635484 | None:intergenic | 35.0% |
| ! | GAAAGACTTTTACCTTTCTG+TGG | - | chr1_2:75635467-75635486 | None:intergenic | 35.0% |
| TTACTAGCAAATCAATGGGA+AGG | + | chr1_2:75635592-75635611 | Msa0092840:CDS | 35.0% | |
| ATTGAAGAAAGTTGGGTCAA+CGG | - | chr1_2:75633748-75633767 | None:intergenic | 35.0% | |
| GATAAATCTGCTAGTGTTGT+TGG | - | chr1_2:75633780-75633799 | None:intergenic | 35.0% | |
| !! | AACTCCATGAAGATTTTGGT+GGG | - | chr1_2:75633865-75633884 | None:intergenic | 35.0% |
| ! | TTCCAACTCCATGAAGATTT+TGG | - | chr1_2:75633869-75633888 | None:intergenic | 35.0% |
| ! | TAGTAATTTTCTTGGGATGG+TGG | - | chr1_2:75633924-75633943 | None:intergenic | 35.0% |
| ! | CCATAGTAATTTTCTTGGGA+TGG | - | chr1_2:75633927-75633946 | None:intergenic | 35.0% |
| CCATCCCAAGAAAATTACTA+TGG | + | chr1_2:75633924-75633943 | Msa0092840:CDS | 35.0% | |
| TACTATGGACTTGGAATACT+TGG | + | chr1_2:75633939-75633958 | Msa0092840:CDS | 35.0% | |
| ATTCTGTTGTGGCAATACAT+TGG | - | chr1_2:75634000-75634019 | None:intergenic | 35.0% | |
| CATCATATTCAACAACTGCA+TGG | + | chr1_2:75634074-75634093 | Msa0092840:CDS | 35.0% | |
| ! | TGGAATAAATAGCCTTGAAG+TGG | + | chr1_2:75634295-75634314 | Msa0092840:CDS | 35.0% |
| ! | ATAAATAGCCTTGAAGTGGA+TGG | + | chr1_2:75634299-75634318 | Msa0092840:CDS | 35.0% |
| !! | TTCGGTTTGGTTCAACAAAA+CGG | - | chr1_2:75634381-75634400 | None:intergenic | 35.0% |
| ACAACAACTGCAAAAATACG+GGG | - | chr1_2:75634438-75634457 | None:intergenic | 35.0% | |
| GACAACAACTGCAAAAATAC+GGG | - | chr1_2:75634439-75634458 | None:intergenic | 35.0% | |
| AGAGAAATCATACACACTGA+TGG | + | chr1_2:75634467-75634486 | Msa0092840:CDS | 35.0% | |
| AAAAGCTTGAGATTCATGGA+AGG | + | chr1_2:75634605-75634624 | Msa0092840:CDS | 35.0% | |
| ACCATCAGATACCTGTTAAT+GGG | + | chr1_2:75634653-75634672 | Msa0092840:CDS | 35.0% | |
| ! | TTTTATGAGACTCTTTGCAC+TGG | + | chr1_2:75634926-75634945 | Msa0092840:CDS | 35.0% |
| TACCCTATTGTATTGAACAG+AGG | + | chr1_2:75635298-75635317 | Msa0092840:intron | 35.0% | |
| ! | CAAGTTTTCTTGAGAACTGT+TGG | - | chr1_2:75635417-75635436 | None:intergenic | 35.0% |
| AAGAAAACTTGTCGTAAAGC+AGG | + | chr1_2:75635426-75635445 | Msa0092840:CDS | 35.0% | |
| AGAAAACTTGTCGTAAAGCA+GGG | + | chr1_2:75635427-75635446 | Msa0092840:CDS | 35.0% | |
| ! | AAGACTTTTACCTTTCTGTG+GGG | - | chr1_2:75635465-75635484 | None:intergenic | 35.0% |
| ! | GAAAGACTTTTACCTTTCTG+TGG | - | chr1_2:75635467-75635486 | None:intergenic | 35.0% |
| TTACTAGCAAATCAATGGGA+AGG | + | chr1_2:75635592-75635611 | Msa0092840:CDS | 35.0% | |
| !! | ACTCCATGAAGATTTTGGTG+GGG | - | chr1_2:75633864-75633883 | None:intergenic | 40.0% |
| ! | CAACTCCATGAAGATTTTGG+TGG | - | chr1_2:75633866-75633885 | None:intergenic | 40.0% |
| CACCAAAATCTTCATGGAGT+TGG | + | chr1_2:75633864-75633883 | Msa0092840:CDS | 40.0% | |
| TATGGACTTGGAATACTTGG+TGG | + | chr1_2:75633942-75633961 | Msa0092840:CDS | 40.0% | |
| TTACCACTCTGATTCTGTTG+TGG | - | chr1_2:75634011-75634030 | None:intergenic | 40.0% | |
| CATATTCAACAACTGCATGG+TGG | + | chr1_2:75634077-75634096 | Msa0092840:CDS | 40.0% | |
| CCTGACCTTGTTGAATATCA+TGG | - | chr1_2:75634124-75634143 | None:intergenic | 40.0% | |
| CCATGATATTCAACAAGGTC+AGG | + | chr1_2:75634121-75634140 | Msa0092840:CDS | 40.0% | |
| GATATTCAACAAGGTCAGGA+TGG | + | chr1_2:75634125-75634144 | Msa0092840:CDS | 40.0% | |
| CACCATGATGTACAACAACA+TGG | + | chr1_2:75634188-75634207 | Msa0092840:CDS | 40.0% | |
| GTCCATGTTGTTGTACATCA+TGG | - | chr1_2:75634193-75634212 | None:intergenic | 40.0% | |
| GATGTACAACAACATGGACA+TGG | + | chr1_2:75634194-75634213 | Msa0092840:CDS | 40.0% | |
| ATGAACTACCATCCACTTCA+AGG | - | chr1_2:75634310-75634329 | None:intergenic | 40.0% | |
| AAAACGGGAATCTGAATTGC+AGG | - | chr1_2:75634365-75634384 | None:intergenic | 40.0% | |
| !! | TCGGTTTGGTTCAACAAAAC+GGG | - | chr1_2:75634380-75634399 | None:intergenic | 40.0% |
| CAAAAATACGGGGTTACTGT+GGG | - | chr1_2:75634428-75634447 | None:intergenic | 40.0% | |
| CACCATCAGATACCTGTTAA+TGG | + | chr1_2:75634652-75634671 | Msa0092840:CDS | 40.0% | |
| CCATCAGATACCTGTTAATG+GGG | + | chr1_2:75634654-75634673 | Msa0092840:CDS | 40.0% | |
| ! | AGTTTTTGTGGGAAAAGCCT+TGG | + | chr1_2:75634821-75634840 | Msa0092840:intron | 40.0% |
| !!! | TTTTTTGGCACAGTACTGTG+TGG | + | chr1_2:75634856-75634875 | Msa0092840:CDS | 40.0% |
| GACATTGGGTTAAGTTTGAG+TGG | + | chr1_2:75635112-75635131 | Msa0092840:intron | 40.0% | |
| CAAGAGCAAATGGGTGATAA+TGG | + | chr1_2:75635164-75635183 | Msa0092840:CDS | 40.0% | |
| ! | TGATCTGCTGCTTCATCAAT+AGG | - | chr1_2:75635375-75635394 | None:intergenic | 40.0% |
| !! | ACTCCATGAAGATTTTGGTG+GGG | - | chr1_2:75633864-75633883 | None:intergenic | 40.0% |
| ! | CAACTCCATGAAGATTTTGG+TGG | - | chr1_2:75633866-75633885 | None:intergenic | 40.0% |
| CACCAAAATCTTCATGGAGT+TGG | + | chr1_2:75633864-75633883 | Msa0092840:CDS | 40.0% | |
| TATGGACTTGGAATACTTGG+TGG | + | chr1_2:75633942-75633961 | Msa0092840:CDS | 40.0% | |
| TTACCACTCTGATTCTGTTG+TGG | - | chr1_2:75634011-75634030 | None:intergenic | 40.0% | |
| CATATTCAACAACTGCATGG+TGG | + | chr1_2:75634077-75634096 | Msa0092840:CDS | 40.0% | |
| CCTGACCTTGTTGAATATCA+TGG | - | chr1_2:75634124-75634143 | None:intergenic | 40.0% | |
| CCATGATATTCAACAAGGTC+AGG | + | chr1_2:75634121-75634140 | Msa0092840:CDS | 40.0% | |
| GATATTCAACAAGGTCAGGA+TGG | + | chr1_2:75634125-75634144 | Msa0092840:CDS | 40.0% | |
| CACCATGATGTACAACAACA+TGG | + | chr1_2:75634188-75634207 | Msa0092840:CDS | 40.0% | |
| GTCCATGTTGTTGTACATCA+TGG | - | chr1_2:75634193-75634212 | None:intergenic | 40.0% | |
| GATGTACAACAACATGGACA+TGG | + | chr1_2:75634194-75634213 | Msa0092840:CDS | 40.0% | |
| ATGAACTACCATCCACTTCA+AGG | - | chr1_2:75634310-75634329 | None:intergenic | 40.0% | |
| AAAACGGGAATCTGAATTGC+AGG | - | chr1_2:75634365-75634384 | None:intergenic | 40.0% | |
| !! | TCGGTTTGGTTCAACAAAAC+GGG | - | chr1_2:75634380-75634399 | None:intergenic | 40.0% |
| CAAAAATACGGGGTTACTGT+GGG | - | chr1_2:75634428-75634447 | None:intergenic | 40.0% | |
| CACCATCAGATACCTGTTAA+TGG | + | chr1_2:75634652-75634671 | Msa0092840:CDS | 40.0% | |
| CCATCAGATACCTGTTAATG+GGG | + | chr1_2:75634654-75634673 | Msa0092840:CDS | 40.0% | |
| ! | AGTTTTTGTGGGAAAAGCCT+TGG | + | chr1_2:75634821-75634840 | Msa0092840:intron | 40.0% |
| !!! | TTTTTTGGCACAGTACTGTG+TGG | + | chr1_2:75634856-75634875 | Msa0092840:CDS | 40.0% |
| GACATTGGGTTAAGTTTGAG+TGG | + | chr1_2:75635112-75635131 | Msa0092840:intron | 40.0% | |
| CAAGAGCAAATGGGTGATAA+TGG | + | chr1_2:75635164-75635183 | Msa0092840:CDS | 40.0% | |
| ! | TGATCTGCTGCTTCATCAAT+AGG | - | chr1_2:75635375-75635394 | None:intergenic | 40.0% |
| !!! | ATTTTCTTGGGATGGTGGAG+TGG | - | chr1_2:75633919-75633938 | None:intergenic | 45.0% |
| TTGCCACAACAGAATCAGAG+TGG | + | chr1_2:75634005-75634024 | Msa0092840:CDS | 45.0% | |
| CAACAACATGGACATGGACA+TGG | + | chr1_2:75634200-75634219 | Msa0092840:CDS | 45.0% | |
| TGTTGAACCAAACCGAACTG+CGG | + | chr1_2:75634384-75634403 | Msa0092840:CDS | 45.0% | |
| TTGATTAAGTGCCCGCAGTT+CGG | - | chr1_2:75634399-75634418 | None:intergenic | 45.0% | |
| AACTGCGGGCACTTAATCAA+TGG | + | chr1_2:75634399-75634418 | Msa0092840:CDS | 45.0% | |
| GCAAAAATACGGGGTTACTG+TGG | - | chr1_2:75634429-75634448 | None:intergenic | 45.0% | |
| GCTTGAGATTCATGGAAGGT+TGG | + | chr1_2:75634609-75634628 | Msa0092840:CDS | 45.0% | |
| CCCCATTAACAGGTATCTGA+TGG | - | chr1_2:75634657-75634676 | None:intergenic | 45.0% | |
| TGTGTGGAACGTCATTTAGC+AGG | + | chr1_2:75634872-75634891 | Msa0092840:CDS | 45.0% | |
| TGAGACTCTTTGCACTGGAT+TGG | + | chr1_2:75634931-75634950 | Msa0092840:CDS | 45.0% | |
| ! | CTCTTTGCACTGGATTGGAT+TGG | + | chr1_2:75634936-75634955 | Msa0092840:CDS | 45.0% |
| GTTTGTCCTGGAAATCACGA+CGG | + | chr1_2:75635002-75635021 | Msa0092840:intron | 45.0% | |
| ATTGGTGGAGCAAGAGCAAA+TGG | + | chr1_2:75635154-75635173 | Msa0092840:CDS | 45.0% | |
| TTGGTGGAGCAAGAGCAAAT+GGG | + | chr1_2:75635155-75635174 | Msa0092840:CDS | 45.0% | |
| !! | ACTTGTTCTGAGAGGTTCCT+AGG | - | chr1_2:75635194-75635213 | None:intergenic | 45.0% |
| AGCAAATCAATGGGAAGGAC+AGG | + | chr1_2:75635597-75635616 | Msa0092840:CDS | 45.0% | |
| !!! | ATTTTCTTGGGATGGTGGAG+TGG | - | chr1_2:75633919-75633938 | None:intergenic | 45.0% |
| TTGCCACAACAGAATCAGAG+TGG | + | chr1_2:75634005-75634024 | Msa0092840:CDS | 45.0% | |
| CAACAACATGGACATGGACA+TGG | + | chr1_2:75634200-75634219 | Msa0092840:CDS | 45.0% | |
| TGTTGAACCAAACCGAACTG+CGG | + | chr1_2:75634384-75634403 | Msa0092840:CDS | 45.0% | |
| TTGATTAAGTGCCCGCAGTT+CGG | - | chr1_2:75634399-75634418 | None:intergenic | 45.0% | |
| AACTGCGGGCACTTAATCAA+TGG | + | chr1_2:75634399-75634418 | Msa0092840:CDS | 45.0% | |
| GCAAAAATACGGGGTTACTG+TGG | - | chr1_2:75634429-75634448 | None:intergenic | 45.0% | |
| GCTTGAGATTCATGGAAGGT+TGG | + | chr1_2:75634609-75634628 | Msa0092840:CDS | 45.0% | |
| CCCCATTAACAGGTATCTGA+TGG | - | chr1_2:75634657-75634676 | None:intergenic | 45.0% | |
| TGTGTGGAACGTCATTTAGC+AGG | + | chr1_2:75634872-75634891 | Msa0092840:CDS | 45.0% | |
| TGAGACTCTTTGCACTGGAT+TGG | + | chr1_2:75634931-75634950 | Msa0092840:CDS | 45.0% | |
| ! | CTCTTTGCACTGGATTGGAT+TGG | + | chr1_2:75634936-75634955 | Msa0092840:CDS | 45.0% |
| GTTTGTCCTGGAAATCACGA+CGG | + | chr1_2:75635002-75635021 | Msa0092840:intron | 45.0% | |
| ATTGGTGGAGCAAGAGCAAA+TGG | + | chr1_2:75635154-75635173 | Msa0092840:CDS | 45.0% | |
| TTGGTGGAGCAAGAGCAAAT+GGG | + | chr1_2:75635155-75635174 | Msa0092840:CDS | 45.0% | |
| !! | ACTTGTTCTGAGAGGTTCCT+AGG | - | chr1_2:75635194-75635213 | None:intergenic | 45.0% |
| AGCAAATCAATGGGAAGGAC+AGG | + | chr1_2:75635597-75635616 | Msa0092840:CDS | 45.0% | |
| !! | TATTTATTTGAATTATTTAT+AGG | + | chr1_2:75634571-75634590 | Msa0092840:intron | 5.0% |
| !! | TATTTATTTGAATTATTTAT+AGG | + | chr1_2:75634571-75634590 | Msa0092840:intron | 5.0% |
| ! | GTTTGTTGGGACAGTGCAGT+GGG | - | chr1_2:75633831-75633850 | None:intergenic | 50.0% |
| !! | AGTTTGTTGGGACAGTGCAG+TGG | - | chr1_2:75633832-75633851 | None:intergenic | 50.0% |
| CTGTCCCAACAAACTCAGCA+TGG | + | chr1_2:75633837-75633856 | Msa0092840:CDS | 50.0% | |
| ! | GGGTCCATGCTGAGTTTGTT+GGG | - | chr1_2:75633844-75633863 | None:intergenic | 50.0% |
| GGACCCCACCAAAATCTTCA+TGG | + | chr1_2:75633858-75633877 | Msa0092840:CDS | 50.0% | |
| GTTGAACCAAACCGAACTGC+GGG | + | chr1_2:75634385-75634404 | Msa0092840:CDS | 50.0% | |
| AAATACGGGGTTACTGTGGG+TGG | - | chr1_2:75634425-75634444 | None:intergenic | 50.0% | |
| ! | CCTTTTCCGTCGTGATTTCC+AGG | - | chr1_2:75635011-75635030 | None:intergenic | 50.0% |
| CCTGGAAATCACGACGGAAA+AGG | + | chr1_2:75635008-75635027 | Msa0092840:intron | 50.0% | |
| !! | TGGGTGATAATGGAACGCCT+AGG | + | chr1_2:75635174-75635193 | Msa0092840:CDS | 50.0% |
| GTAAAGCAGGGTTACCCAGA+TGG | + | chr1_2:75635439-75635458 | Msa0092840:CDS | 50.0% | |
| ATGGGAAGGACAGGATACAG+AGG | + | chr1_2:75635606-75635625 | Msa0092840:CDS | 50.0% | |
| AAGGACAGGATACAGAGGCA+AGG | + | chr1_2:75635611-75635630 | Msa0092840:CDS | 50.0% | |
| AGGACAGGATACAGAGGCAA+GGG | + | chr1_2:75635612-75635631 | Msa0092840:CDS | 50.0% | |
| ! | GTTTGTTGGGACAGTGCAGT+GGG | - | chr1_2:75633831-75633850 | None:intergenic | 50.0% |
| !! | AGTTTGTTGGGACAGTGCAG+TGG | - | chr1_2:75633832-75633851 | None:intergenic | 50.0% |
| CTGTCCCAACAAACTCAGCA+TGG | + | chr1_2:75633837-75633856 | Msa0092840:CDS | 50.0% | |
| ! | GGGTCCATGCTGAGTTTGTT+GGG | - | chr1_2:75633844-75633863 | None:intergenic | 50.0% |
| GGACCCCACCAAAATCTTCA+TGG | + | chr1_2:75633858-75633877 | Msa0092840:CDS | 50.0% | |
| GTTGAACCAAACCGAACTGC+GGG | + | chr1_2:75634385-75634404 | Msa0092840:CDS | 50.0% | |
| AAATACGGGGTTACTGTGGG+TGG | - | chr1_2:75634425-75634444 | None:intergenic | 50.0% | |
| ! | CCTTTTCCGTCGTGATTTCC+AGG | - | chr1_2:75635011-75635030 | None:intergenic | 50.0% |
| CCTGGAAATCACGACGGAAA+AGG | + | chr1_2:75635008-75635027 | Msa0092840:intron | 50.0% | |
| !! | TGGGTGATAATGGAACGCCT+AGG | + | chr1_2:75635174-75635193 | Msa0092840:CDS | 50.0% |
| GTAAAGCAGGGTTACCCAGA+TGG | + | chr1_2:75635439-75635458 | Msa0092840:CDS | 50.0% | |
| ATGGGAAGGACAGGATACAG+AGG | + | chr1_2:75635606-75635625 | Msa0092840:CDS | 50.0% | |
| AAGGACAGGATACAGAGGCA+AGG | + | chr1_2:75635611-75635630 | Msa0092840:CDS | 50.0% | |
| AGGACAGGATACAGAGGCAA+GGG | + | chr1_2:75635612-75635631 | Msa0092840:CDS | 50.0% | |
| GGGGTCCATGCTGAGTTTGT+TGG | - | chr1_2:75633845-75633864 | None:intergenic | 55.0% | |
| TAAGTGCCCGCAGTTCGGTT+TGG | - | chr1_2:75634394-75634413 | None:intergenic | 55.0% | |
| ACTGATGGGGCCCCATTAAC+AGG | - | chr1_2:75634667-75634686 | None:intergenic | 55.0% | |
| ACCTTTCTGTGGGGCCATCT+GGG | - | chr1_2:75635456-75635475 | None:intergenic | 55.0% | |
| TACCTTTCTGTGGGGCCATC+TGG | - | chr1_2:75635457-75635476 | None:intergenic | 55.0% | |
| AGGATACAGAGGCAAGGGCA+AGG | + | chr1_2:75635617-75635636 | Msa0092840:CDS | 55.0% | |
| AGGCAAGGGCAAGGACTGAA+GGG | + | chr1_2:75635626-75635645 | Msa0092840:CDS | 55.0% | |
| GCGATGTCATACAACGCGGT+TGG | - | chr1_2:75635703-75635722 | None:intergenic | 55.0% | |
| GGGGTCCATGCTGAGTTTGT+TGG | - | chr1_2:75633845-75633864 | None:intergenic | 55.0% | |
| TAAGTGCCCGCAGTTCGGTT+TGG | - | chr1_2:75634394-75634413 | None:intergenic | 55.0% | |
| ACTGATGGGGCCCCATTAAC+AGG | - | chr1_2:75634667-75634686 | None:intergenic | 55.0% | |
| ACCTTTCTGTGGGGCCATCT+GGG | - | chr1_2:75635456-75635475 | None:intergenic | 55.0% | |
| TACCTTTCTGTGGGGCCATC+TGG | - | chr1_2:75635457-75635476 | None:intergenic | 55.0% | |
| AGGATACAGAGGCAAGGGCA+AGG | + | chr1_2:75635617-75635636 | Msa0092840:CDS | 55.0% | |
| AGGCAAGGGCAAGGACTGAA+GGG | + | chr1_2:75635626-75635645 | Msa0092840:CDS | 55.0% | |
| GCGATGTCATACAACGCGGT+TGG | - | chr1_2:75635703-75635722 | None:intergenic | 55.0% | |
| ACCCAGATGGCCCCACAGAA+AGG | + | chr1_2:75635452-75635471 | Msa0092840:CDS | 60.0% | |
| GAGGCAAGGGCAAGGACTGA+AGG | + | chr1_2:75635625-75635644 | Msa0092840:CDS | 60.0% | |
| GGCAAGGGCAAGGACTGAAG+GGG | + | chr1_2:75635627-75635646 | Msa0092840:CDS | 60.0% | |
| GGCGGCGATGTCATACAACG+CGG | - | chr1_2:75635707-75635726 | None:intergenic | 60.0% | |
| ACCCAGATGGCCCCACAGAA+AGG | + | chr1_2:75635452-75635471 | Msa0092840:CDS | 60.0% | |
| GAGGCAAGGGCAAGGACTGA+AGG | + | chr1_2:75635625-75635644 | Msa0092840:CDS | 60.0% | |
| GGCAAGGGCAAGGACTGAAG+GGG | + | chr1_2:75635627-75635646 | Msa0092840:CDS | 60.0% | |
| GGCGGCGATGTCATACAACG+CGG | - | chr1_2:75635707-75635726 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 75633705 | 75635741 | 75633705 | ID=Msa0092840;Name=Msa0092840 |
| chr1_2 | mRNA | 75633705 | 75635741 | 75633705 | ID=Msa0092840-mRNA-1;Parent=Msa0092840;Name=Msa0092840-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|6|0|488 |
| chr1_2 | exon | 75633705 | 75634488 | 75633705 | ID=Msa0092840-mRNA-1:exon:26580;Parent=Msa0092840-mRNA-1 |
| chr1_2 | exon | 75634593 | 75634701 | 75634593 | ID=Msa0092840-mRNA-1:exon:26581;Parent=Msa0092840-mRNA-1 |
| chr1_2 | exon | 75634823 | 75635001 | 75634823 | ID=Msa0092840-mRNA-1:exon:26582;Parent=Msa0092840-mRNA-1 |
| chr1_2 | exon | 75635150 | 75635211 | 75635150 | ID=Msa0092840-mRNA-1:exon:26583;Parent=Msa0092840-mRNA-1 |
| chr1_2 | exon | 75635318 | 75635473 | 75635318 | ID=Msa0092840-mRNA-1:exon:26584;Parent=Msa0092840-mRNA-1 |
| chr1_2 | exon | 75635565 | 75635741 | 75635565 | ID=Msa0092840-mRNA-1:exon:26585;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75633705 | 75634488 | 75633705 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75634593 | 75634701 | 75634593 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75634823 | 75635001 | 75634823 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75635150 | 75635211 | 75635150 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75635318 | 75635473 | 75635318 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| chr1_2 | CDS | 75635565 | 75635741 | 75635565 | ID=Msa0092840-mRNA-1:cds;Parent=Msa0092840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
