AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0092870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0092870 MtrunA17_Chr3g0082121 31.548 691 385 17 41 727 49 655 6.94e-99 323
Msa0092870 MtrunA17_Chr2g0324011 30.236 635 367 12 36 665 8 571 1.20e-98 319
Msa0092870 MtrunA17_Chr3g0088371 72.928 181 39 2 618 788 1 181 1.48e-83 265
Msa0092870 MtrunA17_Chr1g0202341 29.302 645 375 17 24 662 40 609 6.56e-78 266
Msa0092870 MtrunA17_Chr8g0363841 28.140 629 379 12 40 665 22 580 3.37e-73 253
Msa0092870 MtrunA17_Chr1g0203721 26.026 780 452 20 1 739 16 711 7.15e-72 253
Msa0092870 MtrunA17_Chr2g0296781 27.541 679 406 20 39 708 1 602 1.35e-67 239
Msa0092870 MtrunA17_Chr5g0448761 25.177 707 450 14 31 728 56 692 5.32e-67 238
Msa0092870 MtrunA17_Chr6g0458391 26.667 630 359 15 41 662 231 765 1.45e-63 228
Msa0092870 MtrunA17_Chr6g0477261 28.843 527 317 14 180 699 7 482 2.21e-62 223
Msa0092870 MtrunA17_Chr1g0164591 35.000 320 193 4 131 448 1 307 3.34e-62 213
Msa0092870 MtrunA17_Chr5g0441581 24.566 749 459 21 14 750 12 666 5.98e-59 214
Msa0092870 MtrunA17_Chr2g0287651 25.437 629 389 13 39 662 79 632 3.76e-58 214
Msa0092870 MtrunA17_Chr1g0207551 24.750 699 428 18 31 718 30 641 1.22e-53 200
Msa0092870 MtrunA17_Chr7g0258861 35.294 306 174 6 36 336 8 294 1.52e-53 188
Msa0092870 MtrunA17_Chr5g0440451 24.202 752 449 21 1 721 1 662 3.21e-53 200
Msa0092870 MtrunA17_Chr1g0172971 80.342 117 22 1 1 116 1 117 7.55e-53 193
Msa0092870 MtrunA17_Chr1g0196541 24.880 627 397 15 39 662 1 556 9.62e-53 196
Msa0092870 MtrunA17_Chr2g0329031 24.457 736 441 20 41 757 20 659 3.00e-52 195
Msa0092870 MtrunA17_Chr1g0198761 26.493 653 382 20 26 660 38 610 7.78e-51 191
Msa0092870 MtrunA17_Chr3g0118611 27.237 503 306 10 221 719 111 557 6.38e-50 189
Msa0092870 MtrunA17_Chr3g0080351 24.313 691 427 14 34 718 75 675 2.99e-48 184
Msa0092870 MtrunA17_Chr2g0290391 25.701 642 374 19 38 660 54 611 2.98e-46 177
Msa0092870 MtrunA17_Chr2g0287061 24.405 672 371 20 41 694 189 741 3.55e-46 177
Msa0092870 MtrunA17_Chr1g0203051 24.580 476 329 6 50 523 94 541 7.60e-45 172
Msa0092870 MtrunA17_Chr2g0276841 25.786 636 376 21 49 670 84 637 1.78e-43 168
Msa0092870 MtrunA17_Chr5g0448511 25.000 452 285 9 216 665 1 400 1.23e-42 164
Msa0092870 MtrunA17_Chr5g0431001 27.716 451 281 12 40 473 66 488 2.09e-41 159
Msa0092870 MtrunA17_Chr2g0291591 26.205 477 297 13 37 499 66 501 3.60e-41 159
Msa0092870 MtrunA17_Chr6g0475591 90.411 73 7 0 188 260 1 73 5.93e-40 141
Msa0092870 MtrunA17_Chr2g0291581 23.445 627 399 13 38 662 74 621 5.31e-39 154
Msa0092870 MtrunA17_Chr2g0294841 26.441 503 317 15 3 482 7 479 2.94e-35 144
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0092870 AT4G38180.1 27.925 641 382 15 32 665 70 637 5.29e-69 244
Msa0092870 AT4G15090.1 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0092870 AT4G15090.5 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0092870 AT4G15090.3 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0092870 AT4G15090.2 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0092870 AT4G15090.4 24.898 735 465 15 50 779 66 718 2.84e-59 217
Msa0092870 AT2G27110.2 26.633 597 364 17 127 719 108 634 1.52e-52 197
Msa0092870 AT2G27110.1 26.633 597 364 17 127 719 108 634 1.52e-52 197
Msa0092870 AT2G27110.3 27.701 509 311 13 213 719 36 489 3.70e-52 194
Msa0092870 AT3G06250.2 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0092870 AT3G06250.1 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0092870 AT3G06250.3 24.803 633 353 16 34 661 189 703 3.66e-50 189
Msa0092870 AT1G76320.3 24.704 676 413 19 50 719 12 597 2.79e-49 186
Msa0092870 AT1G76320.1 24.184 674 419 17 50 719 12 597 1.36e-48 184
Msa0092870 AT1G76320.4 24.184 674 419 17 50 719 12 597 1.36e-48 184
Msa0092870 AT1G76320.2 24.184 674 419 17 50 719 12 597 1.46e-48 184
Msa0092870 AT3G22170.2 22.678 732 445 17 34 753 69 691 1.59e-47 182
Msa0092870 AT3G22170.1 22.678 732 445 17 34 753 69 691 1.59e-47 182
Msa0092870 AT5G18960.2 24.186 645 361 18 26 661 202 727 9.80e-45 174
Msa0092870 AT5G18960.1 24.186 645 361 18 26 661 202 727 9.80e-45 174
Msa0092870 AT4G38170.1 25.058 431 265 10 235 662 24 399 3.81e-43 165
Msa0092870 AT1G10240.2 24.398 623 379 18 49 659 62 604 2.11e-40 159
Msa0092870 AT1G10240.1 24.398 623 379 18 49 659 62 604 2.11e-40 159
Msa0092870 AT5G28530.1 23.318 639 393 17 40 660 60 619 2.52e-39 156
Msa0092870 AT2G32250.5 24.161 745 428 22 4 743 10 622 5.40e-39 155
Msa0092870 AT2G32250.2 24.161 745 428 22 4 743 10 622 9.79e-39 155
Msa0092870 AT2G32250.4 24.161 745 428 22 4 743 10 622 9.79e-39 155
Msa0092870 AT2G32250.6 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0092870 AT2G32250.1 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0092870 AT2G32250.3 24.161 745 428 22 4 743 10 622 1.32e-38 155
Msa0092870 AT5G28530.3 23.161 639 390 18 40 660 60 615 2.17e-38 153
Msa0092870 AT5G28530.2 23.161 639 390 18 40 660 60 615 2.17e-38 153
Msa0092870 AT2G32250.8 24.177 699 396 20 50 743 12 581 4.54e-38 153
Msa0092870 AT2G32250.7 24.177 699 396 20 50 743 12 581 4.59e-38 153
Msa0092870 AT1G80010.1 23.944 639 391 22 41 662 101 661 1.03e-35 145
Msa0092870 AT1G52520.1 21.990 623 410 15 41 662 91 638 5.62e-31 130
Msa0092870 AT4G19990.1 28.731 268 184 4 219 483 106 369 2.54e-27 119
Msa0092870 AT4G19990.1 34.328 134 74 3 591 722 438 559 1.47e-11 68.6
Msa0092870 AT4G19990.5 28.731 268 184 4 219 483 163 426 2.69e-27 119
Msa0092870 AT4G19990.5 34.328 134 74 3 591 722 495 616 1.55e-11 68.6
Msa0092870 AT4G19990.3 28.731 268 184 4 219 483 163 426 2.92e-27 119
Msa0092870 AT4G19990.3 34.328 134 74 3 591 722 495 616 1.52e-11 68.6
Msa0092870 AT4G19990.4 28.731 268 184 4 219 483 163 426 2.92e-27 119
Msa0092870 AT4G19990.4 34.328 134 74 3 591 722 495 616 1.52e-11 68.6
Msa0092870 AT4G19990.7 28.731 268 184 4 219 483 177 440 3.42e-27 119
Msa0092870 AT4G19990.7 34.328 134 74 3 591 722 509 630 1.77e-11 68.6
Msa0092870 AT4G19990.6 28.731 268 184 4 219 483 163 426 4.37e-27 118
Msa0092870 AT4G19990.6 34.328 134 74 3 591 722 495 616 1.40e-11 68.9
Msa0092870 AT4G19990.2 28.731 268 184 4 219 483 163 426 4.37e-27 118
Msa0092870 AT4G19990.2 34.328 134 74 3 591 722 495 616 1.40e-11 68.9
Msa0092870 AT5G28530.4 21.145 629 356 20 40 660 60 556 8.35e-21 98.2

Find 136 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 1_2:+75651597 Msa0092870:CDS
TTTCGATGAGTTAACTAATT+TGG 0.156761 1_2:+75651288 Msa0092870:CDS
AGTCGCTTCTTTGACCTAAT+TGG 0.186128 1_2:-75652423 None:intergenic
CTTTAGTCATTTCAACATTA+TGG 0.194287 1_2:+75651555 Msa0092870:CDS
CAACAAGATTATGCTCTATT+TGG 0.198611 1_2:+75650502 Msa0092870:CDS
TTCATTTCAGCTGCCTTTCT+TGG 0.201003 1_2:+75651007 Msa0092870:intron
TATGGCTTGAGGTTTCTTAT+TGG 0.276008 1_2:-75651134 None:intergenic
CATCGTAAGAGTGTGTTATT+TGG 0.276792 1_2:+75651040 Msa0092870:CDS
TTCTTTGACCTAATTGGATT+TGG 0.299426 1_2:-75652417 None:intergenic
TTAGAAACTAAGCTACTATA+AGG 0.312371 1_2:-75652794 None:intergenic
AATCAGATTTCGACTACAAT+TGG 0.318540 1_2:+75651329 Msa0092870:CDS
TGTTCTTGAGGCAGGGAAAA+AGG 0.322946 1_2:+75652269 Msa0092870:CDS
GCCGATATTTATTGTTTGTT+CGG 0.341758 1_2:-75650552 None:intergenic
ACTAGCCTGGTCTGTGTATA+TGG 0.347339 1_2:-75651152 None:intergenic
GGTTTCGAATGTTGATGTTT+TGG 0.354913 1_2:+75651852 Msa0092870:CDS
TATGCATTGGTCTTCAGTTT+GGG 0.370760 1_2:+75651429 Msa0092870:CDS
CTCAACGGTGTTCTTGAGGC+AGG 0.386173 1_2:+75652261 Msa0092870:CDS
AACAATAAATATCGGCCATT+AGG 0.388497 1_2:+75650559 Msa0092870:CDS
ACCGAACAAACAATAAATAT+CGG 0.389395 1_2:+75650551 Msa0092870:CDS
TTTCAATTTATCATATCTAA+TGG 0.390380 1_2:+75649639 None:intergenic
GTATGCATTGGTCTTCAGTT+TGG 0.392120 1_2:+75651428 Msa0092870:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.395048 1_2:-75652399 None:intergenic
GTCTTTAGTGCCAACATTCA+TGG 0.395146 1_2:-75652145 None:intergenic
TTCTCATACTCAACAAGAAC+TGG 0.395633 1_2:-75650022 None:intergenic
AAGAAAGACCAAATCCAATT+AGG 0.397771 1_2:+75652409 Msa0092870:CDS
TTCCTTCAAATACTATTATG+AGG 0.399583 1_2:+75651729 Msa0092870:CDS
TAAAGAATCATGGAAGTCTT+TGG 0.408500 1_2:+75649793 Msa0092870:CDS
CATGTCGTATGTTTGAGAAC+CGG 0.411671 1_2:+75651977 Msa0092870:CDS
GATTATGATCTTCAAACCTT+GGG 0.413114 1_2:-75651900 None:intergenic
ATAACACTGGATTCTCTGTT+AGG 0.417808 1_2:+75649864 Msa0092870:CDS
GGGTTGTCACAGTCGACATT+AGG 0.419786 1_2:+75651935 Msa0092870:CDS
CGATTATGATCTTCAAACCT+TGG 0.425681 1_2:-75651901 None:intergenic
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 1_2:+75650199 Msa0092870:CDS
AGCTGGAATATATTTGAAGT+TGG 0.433136 1_2:+75650081 Msa0092870:CDS
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 1_2:+75650064 Msa0092870:CDS
CGCTTTAAAACATATTGTGC+AGG 0.447633 1_2:-75652078 None:intergenic
CGTTATGCTTGTAACAAAGA+AGG 0.449439 1_2:+75649947 Msa0092870:CDS
GCTTTAATAAATTCTAAAGC+TGG 0.450264 1_2:+75650229 Msa0092870:CDS
ATCTGAGAGTGGACAATTGA+CGG 0.452529 1_2:+75649718 Msa0092870:CDS
TGGTCTTTGCTCATGGCACA+TGG 0.452802 1_2:+75651219 Msa0092870:CDS
AAAGCTGCAACGGAGTAACT+TGG 0.457471 1_2:-75652761 None:intergenic
GGCCTACTTCGGACTTTAAG+TGG 0.458978 1_2:+75651383 Msa0092870:CDS
ATGTCGTATGTTTGAGAACC+GGG 0.461344 1_2:+75651978 Msa0092870:CDS
GGCCGTGCCACATGTTGGCA+CGG 0.463693 1_2:-75652697 None:intergenic
ATATATGATGGAAGGTGTCT+TGG 0.466340 1_2:+75652581 Msa0092870:CDS
GCACGGCCGTGCCACCCTCC+AGG 0.479737 1_2:+75652712 Msa0092870:CDS
GAAGTGATGGGTCAAGGAGT+TGG 0.484292 1_2:+75650274 Msa0092870:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 1_2:-75651731 None:intergenic
TTACAACCAACCCTTTCCTC+TGG 0.485330 1_2:-75650058 None:intergenic
TTTAATTATGCATATAACAC+TGG 0.485542 1_2:+75649851 Msa0092870:CDS
TCTAATGACAACTCGTCAAA+AGG 0.488137 1_2:+75650342 Msa0092870:CDS
CTCAAGTAGCACAAATGCTC+TGG 0.489977 1_2:-75650169 None:intergenic
TATGAGGAGGACACAACAAA+AGG 0.490908 1_2:+75651745 Msa0092870:CDS
ATGATTGTCAAAACCAAGAA+AGG 0.491378 1_2:-75651020 None:intergenic
ATCAGATTTCGACTACAATT+GGG 0.491708 1_2:+75651330 Msa0092870:CDS
CGTCAAAAGGAGATGGTGGC+TGG 0.492100 1_2:+75650355 Msa0092870:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 1_2:+75651569 Msa0092870:CDS
GACCGCATAAGCTGACTGTT+GGG 0.496307 1_2:-75651649 None:intergenic
TAGAAACTAAGCTACTATAA+GGG 0.498953 1_2:-75652793 None:intergenic
AAAAGCAGCAAAAGTGGTCC+TGG 0.499540 1_2:-75652730 None:intergenic
GAGAACATCTTATGAAGTGA+TGG 0.499875 1_2:+75650261 Msa0092870:CDS
TGTCTTCTGCAGCATCAACT+TGG 0.502977 1_2:-75650447 None:intergenic
AAATGCTCTGGTTTATGTAA+TGG 0.504865 1_2:-75650157 None:intergenic
CTCATTCAAATCGTATGCAT+TGG 0.507227 1_2:+75651416 Msa0092870:CDS
ATCATAATCGACTTGATGAA+AGG 0.507955 1_2:+75651914 Msa0092870:CDS
TTTAAGTCCGAAAATCGAAA+AGG 0.508080 1_2:-75650313 None:intergenic
GAGGGATAATCATGCTGAGT+TGG 0.508852 1_2:+75651588 Msa0092870:CDS
ATTGGTCTTCAGTTTGGGTG+AGG 0.509410 1_2:+75651434 Msa0092870:CDS
TGTCTATAAGATATATAAGT+GGG 0.514682 1_2:+75650117 Msa0092870:CDS
GATCTTCAAACCTTGGGGAA+AGG 0.519004 1_2:-75651894 None:intergenic
TAAAGAATCGAACAAGTGAA+TGG 0.519618 1_2:-75651537 None:intergenic
TCATAATCGACTTGATGAAA+GGG 0.526860 1_2:+75651915 Msa0092870:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 1_2:-75651726 None:intergenic
ACAAAATAAGAAATCAGATA+AGG 0.530342 1_2:+75649913 Msa0092870:CDS
ACTTCAACAACGCACTAGCC+TGG 0.534735 1_2:-75651165 None:intergenic
TAACAAAGAAGGTTTCAAGA+AGG 0.538422 1_2:+75649958 Msa0092870:CDS
TTGAAGAAAAGCAGCAAAAG+TGG 0.539954 1_2:-75652736 None:intergenic
AATCGAACAAGTGAATGGTC+TGG 0.540971 1_2:-75651532 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 1_2:+75651746 Msa0092870:CDS
AGTGGTCCTGGAGGGTGGCA+CGG 0.544924 1_2:-75652718 None:intergenic
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 1_2:+75649959 Msa0092870:CDS
CATTTAGTGATAAAGAATCA+TGG 0.546005 1_2:+75649783 Msa0092870:CDS
AGGAAAGAATATATGATGGA+AGG 0.546216 1_2:+75652573 Msa0092870:intron
GCACGGCCCGTGCCAACATG+TGG 0.553838 1_2:+75652690 Msa0092870:CDS
TGGTCTGTGTATATGGCTTG+AGG 0.556772 1_2:-75651145 None:intergenic
CTGAAATCCACCATGAATGT+TGG 0.557140 1_2:+75652135 Msa0092870:CDS
GGCACGGCCGTGCCACATGT+TGG 0.557392 1_2:-75652702 None:intergenic
TTTGGTGTAGTTCCAACAGA+TGG 0.560581 1_2:-75652381 None:intergenic
GTTGTCTATGAACCATCTGT+TGG 0.562937 1_2:+75652369 Msa0092870:CDS
TGAAAATTCAGTTATTGATG+CGG 0.565546 1_2:+75649742 Msa0092870:CDS
GTGATGGGTCAAGGAGTTGG+AGG 0.568802 1_2:+75650277 Msa0092870:CDS
TACACGTGTTTGCGCAGATG+CGG 0.571672 1_2:+75652221 Msa0092870:CDS
ATGTCTATAAGATATATAAG+TGG 0.572287 1_2:+75650116 Msa0092870:CDS
GCCCGTGCCAACATGTGGCA+CGG 0.574074 1_2:+75652695 Msa0092870:CDS
AATGAAACTCTCTCGAAACC+AGG 0.576081 1_2:+75650409 Msa0092870:CDS
GGACCGCATAAGCTGACTGT+TGG 0.579264 1_2:-75651650 None:intergenic
GCCGTGCCACATGTTGGCAC+GGG 0.580157 1_2:-75652696 None:intergenic
GCAAAAGTGGTCCTGGAGGG+TGG 0.583434 1_2:-75652723 None:intergenic
AAGCTGCAACGGAGTAACTT+GGG 0.584967 1_2:-75652760 None:intergenic
TGGTGTATACTTGTTTACTA+CGG 0.585960 1_2:-75651671 None:intergenic
ATATTAACTTCATCTGAGAG+TGG 0.588105 1_2:+75649707 Msa0092870:CDS
TGTCTTGGAGCAAAAGAAAG+AGG 0.588846 1_2:+75652596 Msa0092870:CDS
TCTTATGAAGTGATGGGTCA+AGG 0.589029 1_2:+75650268 Msa0092870:CDS
TCAACGGTGTTCTTGAGGCA+GGG 0.590097 1_2:+75652262 Msa0092870:CDS
ATTTCTCAACGGTGTTCTTG+AGG 0.591378 1_2:+75652257 Msa0092870:CDS
TTGAAGAAAACCTTTCCCCA+AGG 0.594796 1_2:+75651884 Msa0092870:CDS
GCCGTGCCAAGCTTCTGACT+TGG 0.595821 1_2:-75652674 None:intergenic
TGAAGACTTAGAAGGCGTAA+CGG 0.598405 1_2:-75652337 None:intergenic
GACAACTCGTCAAAAGGAGA+TGG 0.599038 1_2:+75650348 Msa0092870:CDS
TCTCTACCAAGTCAGAAGCT+TGG 0.600115 1_2:+75652668 Msa0092870:CDS
TGGAGCAAAAGAAAGAGGAC+TGG 0.601219 1_2:+75652601 Msa0092870:CDS
TTGATATCGTTGTGCTTGAG+TGG 0.601464 1_2:-75652169 None:intergenic
AGAACATCTTATGAAGTGAT+GGG 0.601988 1_2:+75650262 Msa0092870:CDS
AACTCGTCAAAAGGAGATGG+TGG 0.603142 1_2:+75650351 Msa0092870:CDS
GCAAAACAGTAAAGCTGCAA+CGG 0.603376 1_2:-75652771 None:intergenic
ACGTGTTTGCGCAGATGCGG+AGG 0.605934 1_2:+75652224 Msa0092870:CDS
ATCCCAACAGTCAGCTTATG+CGG 0.606153 1_2:+75651647 Msa0092870:CDS
CTTCAAATACTATTATGAGG+AGG 0.607664 1_2:+75651732 Msa0092870:CDS
AGAACTGGACTGTCACATGT+TGG 0.620791 1_2:-75650007 None:intergenic
AGCCACTTAAAGTCCGAAGT+AGG 0.621799 1_2:-75651385 None:intergenic
GGGTCAAGGAGTTGGAGGCA+CGG 0.621882 1_2:+75650282 Msa0092870:CDS
AGCAGCAAAAGTGGTCCTGG+AGG 0.624795 1_2:-75652727 None:intergenic
ATTATGATCTTCAAACCTTG+GGG 0.630358 1_2:-75651899 None:intergenic
GGTCTTTGCTCATGGCACAT+GGG 0.639768 1_2:+75651220 Msa0092870:CDS
TTTAGTGCCAACATTCATGG+TGG 0.641441 1_2:-75652142 None:intergenic
CATTATGGTTCAGAGAATGA+GGG 0.643278 1_2:+75651570 Msa0092870:CDS
GATTTCAGCTTATCGACAGA+CGG 0.644926 1_2:-75652120 None:intergenic
GCAGCAAAAGTGGTCCTGGA+GGG 0.646732 1_2:-75652726 None:intergenic
CACGTCGACATAAGAAACCC+CGG 0.652123 1_2:-75651996 None:intergenic
TGAATAAATGAAAAGCAAGA+TGG 0.655697 1_2:-75651691 None:intergenic
GCATCTGAAATATTTCTCAA+CGG 0.661104 1_2:+75652246 Msa0092870:CDS
TCAAGCCATATACACAGACC+AGG 0.664578 1_2:+75651147 Msa0092870:CDS
TGTCGTATGTTTGAGAACCG+GGG 0.673760 1_2:+75651979 Msa0092870:CDS
ACCAAGTCAGAAGCTTGGCA+CGG 0.680106 1_2:+75652673 Msa0092870:CDS
ATGTTGATAATGATAATGAG+AGG 0.683310 1_2:+75651830 Msa0092870:CDS
TGTTGATAATGATAATGAGA+GGG 0.689129 1_2:+75651831 Msa0092870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAGTAAAATATTCTAAA+AGG - chr1_2:75652533-75652552 None:intergenic 10.0%
!!! ATTGTCTTTTATTTTATTTT+AGG + chr1_2:75652553-75652572 Msa0092870:intron 10.0%
!! TTTAATTATGCATATAACAC+TGG + chr1_2:75649851-75649870 Msa0092870:CDS 20.0%
!! ACAAAATAAGAAATCAGATA+AGG + chr1_2:75649913-75649932 Msa0092870:CDS 20.0%
!! ATGTCTATAAGATATATAAG+TGG + chr1_2:75650116-75650135 Msa0092870:CDS 20.0%
!! TGTCTATAAGATATATAAGT+GGG + chr1_2:75650117-75650136 Msa0092870:CDS 20.0%
!!! TGAATGTTTATATTGATTGA+AGG + chr1_2:75650706-75650725 Msa0092870:intron 20.0%
!!! AATTTAATGTTCTGGTTTAT+GGG + chr1_2:75650734-75650753 Msa0092870:intron 20.0%
!!! ATGATGAAAAACTGTTTTAA+TGG + chr1_2:75651358-75651377 Msa0092870:CDS 20.0%
!!! TTTTAGGAAAGAATATATGA+TGG + chr1_2:75652569-75652588 Msa0092870:intron 20.0%
! TGAAAATTCAGTTATTGATG+CGG + chr1_2:75649742-75649761 Msa0092870:CDS 25.0%
! CATTTAGTGATAAAGAATCA+TGG + chr1_2:75649783-75649802 Msa0092870:CDS 25.0%
!!! CTTATTTTGTGAATTGTTCT+TGG - chr1_2:75649903-75649922 None:intergenic 25.0%
!!! GCTTTAATAAATTCTAAAGC+TGG + chr1_2:75650229-75650248 Msa0092870:CDS 25.0%
! ACCGAACAAACAATAAATAT+CGG + chr1_2:75650551-75650570 Msa0092870:CDS 25.0%
! AGTACAAAATACTAACCTAA+TGG - chr1_2:75650577-75650596 None:intergenic 25.0%
! TGAAATTTGAATGAATGTTC+TGG + chr1_2:75650624-75650643 Msa0092870:intron 25.0%
!! AGGTTTAGAATTTAATGTTC+TGG + chr1_2:75650726-75650745 Msa0092870:intron 25.0%
!!! GAATTTAATGTTCTGGTTTA+TGG + chr1_2:75650733-75650752 Msa0092870:intron 25.0%
! TTTCTATTTACACAACACAA+TGG + chr1_2:75650943-75650962 Msa0092870:intron 25.0%
!! TGTTGTATTTTGTTCTGATT+TGG + chr1_2:75650984-75651003 Msa0092870:intron 25.0%
! AAAACACCTTGAAAAACATT+CGG - chr1_2:75651196-75651215 None:intergenic 25.0%
! TTTCGATGAGTTAACTAATT+TGG + chr1_2:75651288-75651307 Msa0092870:CDS 25.0%
!!! TGAAAAACTGTTTTAATGGA+AGG + chr1_2:75651362-75651381 Msa0092870:CDS 25.0%
! CTTTAGTCATTTCAACATTA+TGG + chr1_2:75651555-75651574 Msa0092870:CDS 25.0%
! TGAATAAATGAAAAGCAAGA+TGG - chr1_2:75651694-75651713 None:intergenic 25.0%
! CATAATAGTATTTGAAGGAA+AGG - chr1_2:75651729-75651748 None:intergenic 25.0%
! TTCCTTCAAATACTATTATG+AGG + chr1_2:75651729-75651748 Msa0092870:CDS 25.0%
!!! ATGTTGATAATGATAATGAG+AGG + chr1_2:75651830-75651849 Msa0092870:CDS 25.0%
!!! TGTTGATAATGATAATGAGA+GGG + chr1_2:75651831-75651850 Msa0092870:CDS 25.0%
!!! GAGGATTTTCTTATTTCTAA+AGG + chr1_2:75652294-75652313 Msa0092870:CDS 25.0%
ATATTAACTTCATCTGAGAG+TGG + chr1_2:75649707-75649726 Msa0092870:CDS 30.0%
TAAAGAATCATGGAAGTCTT+TGG + chr1_2:75649793-75649812 Msa0092870:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG + chr1_2:75649958-75649977 Msa0092870:CDS 30.0%
AACAAAGAAGGTTTCAAGAA+GGG + chr1_2:75649959-75649978 Msa0092870:CDS 30.0%
TAAAGAAAAACCAGAGGAAA+GGG + chr1_2:75650048-75650067 Msa0092870:CDS 30.0%
! AGCTGGAATATATTTGAAGT+TGG + chr1_2:75650081-75650100 Msa0092870:CDS 30.0%
! AAATGCTCTGGTTTATGTAA+TGG - chr1_2:75650160-75650179 None:intergenic 30.0%
AGAACATCTTATGAAGTGAT+GGG + chr1_2:75650262-75650281 Msa0092870:CDS 30.0%
! GAATCTTCCTTTTCGATTTT+CGG + chr1_2:75650306-75650325 Msa0092870:CDS 30.0%
TTTAAGTCCGAAAATCGAAA+AGG - chr1_2:75650316-75650335 None:intergenic 30.0%
TGGATATCATAGTAAAAACC+TGG - chr1_2:75650430-75650449 None:intergenic 30.0%
!!! AAGACATAGCCAGTATTTTT+TGG + chr1_2:75650464-75650483 Msa0092870:CDS 30.0%
!!! AGACATAGCCAGTATTTTTT+GGG + chr1_2:75650465-75650484 Msa0092870:CDS 30.0%
CAACAAGATTATGCTCTATT+TGG + chr1_2:75650502-75650521 Msa0092870:CDS 30.0%
GCCGATATTTATTGTTTGTT+CGG - chr1_2:75650555-75650574 None:intergenic 30.0%
AACAATAAATATCGGCCATT+AGG + chr1_2:75650559-75650578 Msa0092870:CDS 30.0%
!! ATGTTCTGGTTTAGAATTGA+AGG + chr1_2:75650638-75650657 Msa0092870:intron 30.0%
CTGGTATATGTGTGTTAATT+TGG + chr1_2:75650663-75650682 Msa0092870:intron 30.0%
AAACACATATGATCTTTCCA+TGG - chr1_2:75650797-75650816 None:intergenic 30.0%
ATGATTGTCAAAACCAAGAA+AGG - chr1_2:75651023-75651042 None:intergenic 30.0%
! TCAATTCCGAATGTTTTTCA+AGG + chr1_2:75651187-75651206 Msa0092870:CDS 30.0%
!!! GTTTTTCAAGGTGTTTTTCA+TGG + chr1_2:75651199-75651218 Msa0092870:CDS 30.0%
GAGAATGCAAAGAAAAATCT+CGG + chr1_2:75651244-75651263 Msa0092870:CDS 30.0%
AATCAGATTTCGACTACAAT+TGG + chr1_2:75651329-75651348 Msa0092870:CDS 30.0%
ATCAGATTTCGACTACAATT+GGG + chr1_2:75651330-75651349 Msa0092870:CDS 30.0%
TAAAGAATCGAACAAGTGAA+TGG - chr1_2:75651540-75651559 None:intergenic 30.0%
TGGTGTATACTTGTTTACTA+CGG - chr1_2:75651674-75651693 None:intergenic 30.0%
CTCCTCATAATAGTATTTGA+AGG - chr1_2:75651734-75651753 None:intergenic 30.0%
CTTCAAATACTATTATGAGG+AGG + chr1_2:75651732-75651751 Msa0092870:CDS 30.0%
! CAAAGTTTTCACAATTGAGA+AGG + chr1_2:75651789-75651808 Msa0092870:CDS 30.0%
ATTATGATCTTCAAACCTTG+GGG - chr1_2:75651902-75651921 None:intergenic 30.0%
GATTATGATCTTCAAACCTT+GGG - chr1_2:75651903-75651922 None:intergenic 30.0%
!! ATCATAATCGACTTGATGAA+AGG + chr1_2:75651914-75651933 Msa0092870:CDS 30.0%
!! TCATAATCGACTTGATGAAA+GGG + chr1_2:75651915-75651934 Msa0092870:CDS 30.0%
!!! CTGCACAATATGTTTTAAAG+CGG + chr1_2:75652079-75652098 Msa0092870:CDS 30.0%
! GCATCTGAAATATTTCTCAA+CGG + chr1_2:75652246-75652265 Msa0092870:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG - chr1_2:75652402-75652421 None:intergenic 30.0%
AAGAAAGACCAAATCCAATT+AGG + chr1_2:75652409-75652428 Msa0092870:CDS 30.0%
TTCTTTGACCTAATTGGATT+TGG - chr1_2:75652420-75652439 None:intergenic 30.0%
! AGGAAAGAATATATGATGGA+AGG + chr1_2:75652573-75652592 Msa0092870:intron 30.0%
!!! GTGTTTGTTGCTGTTTTCAA+TGG + chr1_2:75649679-75649698 Msa0092870:exon 35.0%
ATAACACTGGATTCTCTGTT+AGG + chr1_2:75649864-75649883 Msa0092870:CDS 35.0%
CGTTATGCTTGTAACAAAGA+AGG + chr1_2:75649947-75649966 Msa0092870:CDS 35.0%
GTCTGCTTAATCCTAAAAAC+AGG + chr1_2:75649984-75650003 Msa0092870:CDS 35.0%
TTCTCATACTCAACAAGAAC+TGG - chr1_2:75650025-75650044 None:intergenic 35.0%
GAAAGCTAAAGAAAAACCAG+AGG + chr1_2:75650042-75650061 Msa0092870:CDS 35.0%
CTAAAGAAAAACCAGAGGAA+AGG + chr1_2:75650047-75650066 Msa0092870:CDS 35.0%
CGAGAAGTAAATGAAGTTCA+AGG + chr1_2:75650199-75650218 Msa0092870:CDS 35.0%
GAGAACATCTTATGAAGTGA+TGG + chr1_2:75650261-75650280 Msa0092870:CDS 35.0%
TCTAATGACAACTCGTCAAA+AGG + chr1_2:75650342-75650361 Msa0092870:CDS 35.0%
! TGGTTTAGAATTGAAGGTTC+TGG + chr1_2:75650644-75650663 Msa0092870:intron 35.0%
CATAAATTCCAAGGCAAGAT+AGG - chr1_2:75650764-75650783 None:intergenic 35.0%
TGTACAGAGCATAAATTCCA+AGG - chr1_2:75650773-75650792 None:intergenic 35.0%
! CATCGTAAGAGTGTGTTATT+TGG + chr1_2:75651040-75651059 Msa0092870:CDS 35.0%
!!! AGACATCAGCTACTTTTGAT+TGG + chr1_2:75651083-75651102 Msa0092870:CDS 35.0%
TATGGCTTGAGGTTTCTTAT+TGG - chr1_2:75651137-75651156 None:intergenic 35.0%
! TTTTTCATGGTCTTTGCTCA+TGG + chr1_2:75651212-75651231 Msa0092870:CDS 35.0%
! TTTTAATGGAAGGCCTACTT+CGG + chr1_2:75651372-75651391 Msa0092870:CDS 35.0%
CTCATTCAAATCGTATGCAT+TGG + chr1_2:75651416-75651435 Msa0092870:CDS 35.0%
!! TATGCATTGGTCTTCAGTTT+GGG + chr1_2:75651429-75651448 Msa0092870:CDS 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG + chr1_2:75651499-75651518 Msa0092870:CDS 35.0%
ACATTATGGTTCAGAGAATG+AGG + chr1_2:75651569-75651588 Msa0092870:CDS 35.0%
CATTATGGTTCAGAGAATGA+GGG + chr1_2:75651570-75651589 Msa0092870:CDS 35.0%
! GGTTTCGAATGTTGATGTTT+TGG + chr1_2:75651852-75651871 Msa0092870:CDS 35.0%
CGATTATGATCTTCAAACCT+TGG - chr1_2:75651904-75651923 None:intergenic 35.0%
!! TCGACGTGTTTTCAAGATTT+TGG + chr1_2:75652011-75652030 Msa0092870:CDS 35.0%
!! ACGTGTTTTCAAGATTTTGG+AGG + chr1_2:75652014-75652033 Msa0092870:CDS 35.0%
!! TTCAAGATTTTGGAGGTCTT+AGG + chr1_2:75652021-75652040 Msa0092870:CDS 35.0%
!! CGCTTTAAAACATATTGTGC+AGG - chr1_2:75652081-75652100 None:intergenic 35.0%
!!! CACAATATGTTTTAAAGCGG+TGG + chr1_2:75652082-75652101 Msa0092870:CDS 35.0%
!! ACTGCTTTTGAAGACTTAGA+AGG - chr1_2:75652348-75652367 None:intergenic 35.0%
!! ATATATGATGGAAGGTGTCT+TGG + chr1_2:75652581-75652600 Msa0092870:CDS 35.0%
TTGAAGAAAAGCAGCAAAAG+TGG - chr1_2:75652739-75652758 None:intergenic 35.0%
ATCTGAGAGTGGACAATTGA+CGG + chr1_2:75649718-75649737 Msa0092870:CDS 40.0%
!! TCACATGTTGGCCTGTTTTT+AGG - chr1_2:75649998-75650017 None:intergenic 40.0%
!! TCTTATGAAGTGATGGGTCA+AGG + chr1_2:75650268-75650287 Msa0092870:CDS 40.0%
AATGAAACTCTCTCGAAACC+AGG + chr1_2:75650409-75650428 Msa0092870:CDS 40.0%
TCCATCTGCCCAAAAAATAC+TGG - chr1_2:75650476-75650495 None:intergenic 40.0%
ATTTATGCTCTGTACAGCCA+TGG + chr1_2:75650777-75650796 Msa0092870:intron 40.0%
TCCAGCTATGCAAAGATCAT+AGG + chr1_2:75650887-75650906 Msa0092870:intron 40.0%
ACCTATGATCTTTGCATAGC+TGG - chr1_2:75650891-75650910 None:intergenic 40.0%
TTCATTTCAGCTGCCTTTCT+TGG + chr1_2:75651007-75651026 Msa0092870:intron 40.0%
!! GTATGCATTGGTCTTCAGTT+TGG + chr1_2:75651428-75651447 Msa0092870:CDS 40.0%
AATCGAACAAGTGAATGGTC+TGG - chr1_2:75651535-75651554 None:intergenic 40.0%
! TCATGCTGAGTTGGACTTTA+AGG + chr1_2:75651597-75651616 Msa0092870:CDS 40.0%
TATGAGGAGGACACAACAAA+AGG + chr1_2:75651745-75651764 Msa0092870:CDS 40.0%
ATGAGGAGGACACAACAAAA+GGG + chr1_2:75651746-75651765 Msa0092870:CDS 40.0%
TTGAAGAAAACCTTTCCCCA+AGG + chr1_2:75651884-75651903 Msa0092870:CDS 40.0%
CATGTCGTATGTTTGAGAAC+CGG + chr1_2:75651977-75651996 Msa0092870:CDS 40.0%
ATGTCGTATGTTTGAGAACC+GGG + chr1_2:75651978-75651997 Msa0092870:CDS 40.0%
!! AAGATTTTGGAGGTCTTAGG+TGG + chr1_2:75652024-75652043 Msa0092870:CDS 40.0%
GATTTCAGCTTATCGACAGA+CGG - chr1_2:75652123-75652142 None:intergenic 40.0%
CTGAAATCCACCATGAATGT+TGG + chr1_2:75652135-75652154 Msa0092870:CDS 40.0%
TTTAGTGCCAACATTCATGG+TGG - chr1_2:75652145-75652164 None:intergenic 40.0%
GTCTTTAGTGCCAACATTCA+TGG - chr1_2:75652148-75652167 None:intergenic 40.0%
TTGATATCGTTGTGCTTGAG+TGG - chr1_2:75652172-75652191 None:intergenic 40.0%
ATTTCTCAACGGTGTTCTTG+AGG + chr1_2:75652257-75652276 Msa0092870:CDS 40.0%
! TGAAGACTTAGAAGGCGTAA+CGG - chr1_2:75652340-75652359 None:intergenic 40.0%
GTTGTCTATGAACCATCTGT+TGG + chr1_2:75652369-75652388 Msa0092870:CDS 40.0%
! TTTGGTGTAGTTCCAACAGA+TGG - chr1_2:75652384-75652403 None:intergenic 40.0%
AGTCGCTTCTTTGACCTAAT+TGG - chr1_2:75652426-75652445 None:intergenic 40.0%
TGTCTTGGAGCAAAAGAAAG+AGG + chr1_2:75652596-75652615 Msa0092870:CDS 40.0%
GCAAAACAGTAAAGCTGCAA+CGG - chr1_2:75652774-75652793 None:intergenic 40.0%
AGAACTGGACTGTCACATGT+TGG - chr1_2:75650010-75650029 None:intergenic 45.0%
GAAAAACCAGAGGAAAGGGT+TGG + chr1_2:75650052-75650071 Msa0092870:CDS 45.0%
TTACAACCAACCCTTTCCTC+TGG - chr1_2:75650061-75650080 None:intergenic 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG + chr1_2:75650064-75650083 Msa0092870:CDS 45.0%
CTCAAGTAGCACAAATGCTC+TGG - chr1_2:75650172-75650191 None:intergenic 45.0%
GACAACTCGTCAAAAGGAGA+TGG + chr1_2:75650348-75650367 Msa0092870:CDS 45.0%
AACTCGTCAAAAGGAGATGG+TGG + chr1_2:75650351-75650370 Msa0092870:CDS 45.0%
TGTCTTCTGCAGCATCAACT+TGG - chr1_2:75650450-75650469 None:intergenic 45.0%
!!! GCCAGTATTTTTTGGGCAGA+TGG + chr1_2:75650472-75650491 Msa0092870:CDS 45.0%
TGGTCTGTGTATATGGCTTG+AGG - chr1_2:75651148-75651167 None:intergenic 45.0%
TCAAGCCATATACACAGACC+AGG + chr1_2:75651147-75651166 Msa0092870:CDS 45.0%
! ACTAGCCTGGTCTGTGTATA+TGG - chr1_2:75651155-75651174 None:intergenic 45.0%
AGCCACTTAAAGTCCGAAGT+AGG - chr1_2:75651388-75651407 None:intergenic 45.0%
!! ATTGGTCTTCAGTTTGGGTG+AGG + chr1_2:75651434-75651453 Msa0092870:CDS 45.0%
! GTGAGGTCACATTTTACAGC+TGG + chr1_2:75651451-75651470 Msa0092870:CDS 45.0%
GAGGGATAATCATGCTGAGT+TGG + chr1_2:75651588-75651607 Msa0092870:CDS 45.0%
ATCCCAACAGTCAGCTTATG+CGG + chr1_2:75651647-75651666 Msa0092870:CDS 45.0%
GATCTTCAAACCTTGGGGAA+AGG - chr1_2:75651897-75651916 None:intergenic 45.0%
TGTCGTATGTTTGAGAACCG+GGG + chr1_2:75651979-75651998 Msa0092870:CDS 45.0%
TGTTCTTGAGGCAGGGAAAA+AGG + chr1_2:75652269-75652288 Msa0092870:CDS 45.0%
TGGAGCAAAAGAAAGAGGAC+TGG + chr1_2:75652601-75652620 Msa0092870:CDS 45.0%
TCTCTACCAAGTCAGAAGCT+TGG + chr1_2:75652668-75652687 Msa0092870:CDS 45.0%
AAAAGCAGCAAAAGTGGTCC+TGG - chr1_2:75652733-75652752 None:intergenic 45.0%
AAGCTGCAACGGAGTAACTT+GGG - chr1_2:75652763-75652782 None:intergenic 45.0%
AAAGCTGCAACGGAGTAACT+TGG - chr1_2:75652764-75652783 None:intergenic 45.0%
!! GAAGTGATGGGTCAAGGAGT+TGG + chr1_2:75650274-75650293 Msa0092870:CDS 50.0%
TGGGTGATCCTATCTTGCCT+TGG + chr1_2:75650753-75650772 Msa0092870:intron 50.0%
ACTTCAACAACGCACTAGCC+TGG - chr1_2:75651168-75651187 None:intergenic 50.0%
TGGTCTTTGCTCATGGCACA+TGG + chr1_2:75651219-75651238 Msa0092870:CDS 50.0%
GGTCTTTGCTCATGGCACAT+GGG + chr1_2:75651220-75651239 Msa0092870:CDS 50.0%
GGCCTACTTCGGACTTTAAG+TGG + chr1_2:75651383-75651402 Msa0092870:CDS 50.0%
GACCGCATAAGCTGACTGTT+GGG - chr1_2:75651652-75651671 None:intergenic 50.0%
GGGTTGTCACAGTCGACATT+AGG + chr1_2:75651935-75651954 Msa0092870:CDS 50.0%
CACGTCGACATAAGAAACCC+CGG - chr1_2:75651999-75652018 None:intergenic 50.0%
TACACGTGTTTGCGCAGATG+CGG + chr1_2:75652221-75652240 Msa0092870:CDS 50.0%
TCAACGGTGTTCTTGAGGCA+GGG + chr1_2:75652262-75652281 Msa0092870:CDS 50.0%
ACCAAGTCAGAAGCTTGGCA+CGG + chr1_2:75652673-75652692 Msa0092870:CDS 50.0%
!! GTGATGGGTCAAGGAGTTGG+AGG + chr1_2:75650277-75650296 Msa0092870:CDS 55.0%
! CGTCAAAAGGAGATGGTGGC+TGG + chr1_2:75650355-75650374 Msa0092870:CDS 55.0%
GGACCGCATAAGCTGACTGT+TGG - chr1_2:75651653-75651672 None:intergenic 55.0%
CTCAACGGTGTTCTTGAGGC+AGG + chr1_2:75652261-75652280 Msa0092870:CDS 55.0%
TGAGGCAGGGAAAAAGGCAG+AGG + chr1_2:75652275-75652294 Msa0092870:CDS 55.0%
GCAGCAAAAGTGGTCCTGGA+GGG - chr1_2:75652729-75652748 None:intergenic 55.0%
AGCAGCAAAAGTGGTCCTGG+AGG - chr1_2:75652730-75652749 None:intergenic 55.0%
GGGTCAAGGAGTTGGAGGCA+CGG + chr1_2:75650282-75650301 Msa0092870:CDS 60.0%
ACGTGTTTGCGCAGATGCGG+AGG + chr1_2:75652224-75652243 Msa0092870:CDS 60.0%
GCCGTGCCAAGCTTCTGACT+TGG - chr1_2:75652677-75652696 None:intergenic 60.0%
GCAAAAGTGGTCCTGGAGGG+TGG - chr1_2:75652726-75652745 None:intergenic 60.0%
GCCCGTGCCAACATGTGGCA+CGG + chr1_2:75652695-75652714 Msa0092870:CDS 65.0%
GCCGTGCCACATGTTGGCAC+GGG - chr1_2:75652699-75652718 None:intergenic 65.0%
GGCCGTGCCACATGTTGGCA+CGG - chr1_2:75652700-75652719 None:intergenic 65.0%
AGTGGTCCTGGAGGGTGGCA+CGG - chr1_2:75652721-75652740 None:intergenic 65.0%
GCACGGCCCGTGCCAACATG+TGG + chr1_2:75652690-75652709 Msa0092870:CDS 70.0%
GGCACGGCCGTGCCACATGT+TGG - chr1_2:75652705-75652724 None:intergenic 70.0%
! GCACGGCCGTGCCACCCTCC+AGG + chr1_2:75652712-75652731 Msa0092870:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 75649653 75652809 75649653 ID=Msa0092870;Name=Msa0092870
chr1_2 mRNA 75649653 75652809 75649653 ID=Msa0092870-mRNA-1;Parent=Msa0092870;Name=Msa0092870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=45|0.5|0.33|0.66|1|1|3|0|850
chr1_2 exon 75649653 75650580 75649653 ID=Msa0092870-mRNA-1:exon:26586;Parent=Msa0092870-mRNA-1
chr1_2 exon 75651017 75652451 75651017 ID=Msa0092870-mRNA-1:exon:26587;Parent=Msa0092870-mRNA-1
chr1_2 exon 75652575 75652809 75652575 ID=Msa0092870-mRNA-1:exon:26588;Parent=Msa0092870-mRNA-1
chr1_2 five_prime_UTR 75649653 75649697 75649653 ID=Msa0092870-mRNA-1:five_prime_utr;Parent=Msa0092870-mRNA-1
chr1_2 CDS 75649698 75650580 75649698 ID=Msa0092870-mRNA-1:cds;Parent=Msa0092870-mRNA-1
chr1_2 CDS 75651017 75652451 75651017 ID=Msa0092870-mRNA-1:cds;Parent=Msa0092870-mRNA-1
chr1_2 CDS 75652575 75652809 75652575 ID=Msa0092870-mRNA-1:cds;Parent=Msa0092870-mRNA-1
Gene Sequence

>Msa0092870

ATGGATTTGATATTAACTTCATCTGAGAGTGGACAATTGACGGTTGAAAATTCAGTTATTGATGCGGATAATTCTCAATGTTACTCATTTAGTGATAAAGAATCATGGAAGTCTTTGGTCTTTAAATCTATAAAAGAGATTGAAGATTTTTATTTTAATTATGCATATAACACTGGATTCTCTGTTAGGAGTATGTTGAAGTCCAAGAACAATTCACAAAATAAGAAATCAGATAAGGTACATTATGTGCGTTATGCTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTCTGCTTAATCCTAAAAACAGGCCAACATGTGACAGTCCAGTTCTTGTTGAGTATGAGAAAGCTAAAGAAAAACCAGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGTTGGATGAAGCGTTGAATGTCTATAAGATATATAAGTGGGAAGTTGATCACTGTCATCCATTACATAAACCAGAGCATTTGTGCTACTTGAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTTGCTTTAATAAATTCTAAAGCTGGAATGTCGATGAGAACATCTTATGAAGTGATGGGTCAAGGAGTTGGAGGCACGGAGAATCTTCCTTTTCGATTTTCGGACTTAAAGAACTATCTAATGACAACTCGTCAAAAGGAGATGGTGGCTGGTGAAGCAACTGTTATTCAAGAATTCTTTAGAAATGAAACTCTCTCGAAACCAGGTTTTTACTATGATATCCAAGTTGATGCTGCAGAAGACATAGCCAGTATTTTTTGGGCAGATGGAATTATGCAACAAGATTATGCTCTATTTGGTGATGTTGTCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGCTGCCTTTCTTGGTTTTGACAATCATCGTAAGAGTGTGTTATTTGGTGCTGCGCTACTGTATGATGAGACATCAGCTACTTTTGATTGGTTGTTTACAACTTTTTTGAAGTGTATGTCCAATAAGAAACCTCAAGCCATATACACAGACCAGGCTAGTGCGTTGTTGAAGTCAATTCCGAATGTTTTTCAAGGTGTTTTTCATGGTCTTTGCTCATGGCACATGGGAGAGAATGCAAAGAAAAATCTCGGCTCTCGTGCAAACAGTGCATTTTTCGATGAGTTAACTAATTTGGTTTCAAATGTCGAAGATGAATCAGATTTCGACTACAATTGGGATCAGATGATGAAAAACTGTTTTAATGGAAGGCCTACTTCGGACTTTAAGTGGCTTGTTCAAACTCATTCAAATCGTATGCATTGGTCTTCAGTTTGGGTGAGGTCACATTTTACAGCTGGTTTGAAAACGACACAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTTTGCAGCCAGACCATTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTTATGCGGTCCGTAGTAAACAAGTATACACCATCTTGCTTTTCATTTATTCACAGTCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGAATTGATCAAGTTCTTCAAAGTTTTCACAATTGAGAAGGTTGATTATAATTACGATGATGTTGATAATGATAATGAGAGGGTTTCGAATGTTGATGTTTTGGATGCAGAATTTGAAGAAAACCTTTCCCCAAGGTTTGAAGATCATAATCGACTTGATGAAAGGGTTGTCACAGTCGACATTAGGAGCAAAAGTTTTACTTGTTCATGTCGTATGTTTGAGAACCGGGGTTTCTTATGTCGACGTGTTTTCAAGATTTTGGAGGTCTTAGGTGGTCATGTGCAATATCATTTTTTGAAGACTATACCTGCACAATATGTTTTAAAGCGGTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGCTGAAATCCACCATGAATGTTGGCACTAAAGACACCACTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTGTTTGCGCAGATGCGGAGGCATCTGAAATATTTCTCAACGGTGTTCTTGAGGCAGGGAAAAAGGCAGAGGATTTTCTTATTTCTAAAGGTATTCATACAGATCGATCATCCGTTACGCCTTCTAAGTCTTCAAAAGCAGTTGTTGTCTATGAACCATCTGTTGGAACTACACCAAAGTTCAAAGAAAGACCAAATCCAATTAGGTCAAAGAAGCGACTTGATGAGAAAGAATATATGATGGAAGGTGTCTTGGAGCAAAAGAAAGAGGACTGGAGCAAATACAGTGCAAAACTACGAAGATATGAGACAAAAATATGTCTCTACCAAGTCAGAAGCTTGGCACGGCCCGTGCCAACATGTGGCACGGCCGTGCCACCCTCCAGGACCACTTTTGCTGCTTTTCTTCAAGCCCAAGTTACTCCGTTGCAGCTTTACTGTTTTGCCCTTATAGTAGCTTAG
Protein sequence

>Msa0092870

MDLILTSSESGQLTVENSVIDADNSQCYSFSDKESWKSLVFKSIKEIEDFYFNYAYNTGFSVRSMLKSKNNSQNKKSDKVHYVRYACNKEGFKKGSLLNPKNRPTCDSPVLVEYEKAKEKPEERVGCKAGIYLKLDEALNVYKIYKWEVDHCHPLHKPEHLCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTTRQKEMVAGEATVIQEFFRNETLSKPGFYYDIQVDAAEDIASIFWADGIMQQDYALFGDVVSFDTTYRTNNKYRPLAAFLGFDNHRKSVLFGAALLYDETSATFDWLFTTFLKCMSNKKPQAIYTDQASALLKSIPNVFQGVFHGLCSWHMGENAKKNLGSRANSAFFDELTNLVSNVEDESDFDYNWDQMMKNCFNGRPTSDFKWLVQTHSNRMHWSSVWVRSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFSFIHSQYDLSFKYYYEEDTTKGSELIKFFKVFTIEKVDYNYDDVDNDNERVSNVDVLDAEFEENLSPRFEDHNRLDERVVTVDIRSKSFTCSCRMFENRGFLCRRVFKILEVLGGHVQYHFLKTIPAQYVLKRWTRDVRPSVDKLKSTMNVGTKDTTQAQRYQQICAVTVQLSTRVCADAEASEIFLNGVLEAGKKAEDFLISKGIHTDRSSVTPSKSSKAVVVYEPSVGTTPKFKERPNPIRSKKRLDEKEYMMEGVLEQKKEDWSKYSAKLRRYETKICLYQVRSLARPVPTCGTAVPPSRTTFAAFLQAQVTPLQLYCFALIVA*