Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102650 | G7I7R0 | 97.451 | 1020 | 26 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2038 |
Gene ID | Type | Classification |
---|---|---|
Msa0102650 | TR | IWS1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102650 | MtrunA17_Chr1g0156791 | 97.451 | 1020 | 26 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2038 |
Msa0102650 | MtrunA17_Chr6g0451341 | 29.783 | 507 | 227 | 28 | 599 | 1020 | 1127 | 1589 | 8.68e-17 | 86.3 |
Msa0102650 | MtrunA17_Chr6g0451341 | 35.333 | 150 | 89 | 5 | 1 | 148 | 254 | 397 | 1.01e-14 | 79.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0102650 | AT4G24200.2 | 39.316 | 585 | 284 | 25 | 472 | 1020 | 451 | 1000 | 2.33e-70 | 254 |
Msa0102650 | AT4G24200.1 | 39.316 | 585 | 284 | 25 | 472 | 1020 | 451 | 1000 | 2.33e-70 | 254 |
Msa0102650 | AT3G48060.2 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1136 | 1608 | 1.25e-15 | 82.8 |
Msa0102650 | AT3G48060.1 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.53e-15 | 82.4 |
Msa0102650 | AT3G48060.3 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.53e-15 | 82.4 |
Msa0102650 | AT3G48050.1 | 27.634 | 503 | 242 | 25 | 599 | 1007 | 1133 | 1607 | 1.77e-15 | 82.4 |
Msa0102650 | AT3G48050.1 | 31.788 | 151 | 90 | 5 | 5 | 148 | 263 | 407 | 6.19e-11 | 67.4 |
Msa0102650 | AT3G48050.2 | 27.634 | 503 | 242 | 25 | 599 | 1007 | 1133 | 1607 | 1.77e-15 | 82.4 |
Msa0102650 | AT3G48050.2 | 31.788 | 151 | 90 | 5 | 5 | 148 | 263 | 407 | 6.19e-11 | 67.4 |
Find 254 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGGAGCTGGTGGCGTTTC+AGG | 0.062744 | 1_3:-9502005 | Msa0102650:CDS |
TGCTCCTGCAATATCGATTT+TGG | 0.128104 | 1_3:-9502126 | Msa0102650:CDS |
GAATCTTCAGGCTTGCCTTC+TGG | 0.146600 | 1_3:-9502440 | Msa0102650:CDS |
AAGAGCATGTTCCTCAAATT+TGG | 0.207541 | 1_3:-9502079 | Msa0102650:CDS |
GTACTTTCAAACTGATTTAC+TGG | 0.207850 | 1_3:-9502207 | Msa0102650:CDS |
GGTCACAATGTTAGCGCTTC+TGG | 0.217592 | 1_3:+9503147 | None:intergenic |
GATTCAGGCTTAGGATTTAT+TGG | 0.225150 | 1_3:+9503637 | None:intergenic |
TGTGATAAAGTAATAGTTTC+TGG | 0.230722 | 1_3:-9503511 | Msa0102650:CDS |
TTTGATCTTAATGAAGAATA+TGG | 0.251619 | 1_3:-9502767 | Msa0102650:CDS |
AATAGTGCCTGAATCTTCTT+TGG | 0.260722 | 1_3:-9503566 | Msa0102650:CDS |
AATCTTCAGGCTTGCCTTCT+GGG | 0.262552 | 1_3:-9502439 | Msa0102650:CDS |
CCAGCCATGCTCATAATATA+TGG | 0.269350 | 1_3:+9501783 | None:intergenic |
AAGAAAATCTTGCCTTTGTT+TGG | 0.278777 | 1_3:+9502517 | None:intergenic |
ACGGAGGGGCAGCTCTTCTT+TGG | 0.294640 | 1_3:-9502317 | Msa0102650:CDS |
AAGTTCAATTTCAGAATTCT+TGG | 0.310934 | 1_3:+9503126 | None:intergenic |
TTAACATTAGCAGCCTTATC+TGG | 0.317575 | 1_3:+9503934 | None:intergenic |
TTCAATACTTGAAGAAGATT+TGG | 0.318707 | 1_3:+9502172 | None:intergenic |
TCTTTGGAAGAAATGGCTAT+TGG | 0.327878 | 1_3:-9502301 | Msa0102650:CDS |
TCTTCAAGTATTGAAGTATA+TGG | 0.328883 | 1_3:-9502164 | Msa0102650:CDS |
TCTGACATGGAACTTGATTA+TGG | 0.330891 | 1_3:-9503283 | Msa0102650:CDS |
TCTGAAATTGAACTTGACTA+TGG | 0.332417 | 1_3:-9503118 | Msa0102650:CDS |
TCAAAACCTGCACAGACTTC+AGG | 0.334253 | 1_3:-9502680 | Msa0102650:CDS |
TCCAAGTCAGGGATGCATTC+TGG | 0.341426 | 1_3:+9502854 | None:intergenic |
CTTCAACAATCCTCAAGTTC+AGG | 0.342590 | 1_3:-9501612 | Msa0102650:CDS |
AAAGGCCCTCCAGAGAAATT+AGG | 0.344169 | 1_3:-9503664 | Msa0102650:CDS |
GTCCTTCTAATTGAATAAAA+AGG | 0.346830 | 1_3:+9504370 | None:intergenic |
GGCTCAACAGCCTTGCCATT+TGG | 0.349494 | 1_3:+9502050 | None:intergenic |
AACTCGGGTTTCATGATTGA+TGG | 0.353921 | 1_3:-9501708 | Msa0102650:CDS |
GAAAGTGAATTGACATCGTC+TGG | 0.354075 | 1_3:-9503790 | Msa0102650:CDS |
AAACAAATTGGTGAATCTTC+AGG | 0.355173 | 1_3:-9502452 | Msa0102650:CDS |
AAAGAAGATTCAGGCACTAT+TGG | 0.361886 | 1_3:+9503568 | None:intergenic |
CAGCTCTTCTTTGGAAGAAA+TGG | 0.365649 | 1_3:-9502308 | Msa0102650:CDS |
ATTGGTGCTCCTAATTTCTC+TGG | 0.369387 | 1_3:+9503655 | None:intergenic |
TATTGCAGGAGCATCTGATT+TGG | 0.372446 | 1_3:+9502136 | None:intergenic |
TGAGATTCTTATCAATCATA+TGG | 0.372514 | 1_3:+9504067 | None:intergenic |
CAAATTTGGTCTTTGCCAAA+TGG | 0.377269 | 1_3:-9502065 | Msa0102650:CDS |
GGAAACTTTGCTCTGTTTGA+AGG | 0.378573 | 1_3:+9503168 | None:intergenic |
TCAATAATGTTGGGGCTTGT+CGG | 0.380965 | 1_3:+9503313 | None:intergenic |
GAACTCTTGTCAATAATGTT+GGG | 0.387120 | 1_3:+9503304 | None:intergenic |
GCCAGTTGTCTTCAGTGAAC+GGG | 0.388066 | 1_3:-9504035 | Msa0102650:CDS |
GATGAACTGGCAAAACAAAT+TGG | 0.391064 | 1_3:-9502464 | Msa0102650:CDS |
CAGGAGCTGGTGGCGTTTCA+GGG | 0.395704 | 1_3:-9502004 | Msa0102650:CDS |
TCTTTGAAACTTCCTTGTTT+CGG | 0.396161 | 1_3:+9503748 | None:intergenic |
AGCTGGTGGCGTTTCAGGGA+TGG | 0.404802 | 1_3:-9502000 | Msa0102650:CDS |
CTCCGGTAGTACCTCAAGTT+GGG | 0.406048 | 1_3:-9501845 | Msa0102650:CDS |
GACCGTGGTTCATTGATAGA+TGG | 0.406642 | 1_3:-9504350 | Msa0102650:CDS |
AGATGCTAAGTCTCATGATA+TGG | 0.410271 | 1_3:-9504106 | Msa0102650:CDS |
TCATGTTCCAAAGAAGATTC+AGG | 0.415078 | 1_3:+9503559 | None:intergenic |
AAGTCTCATGATATGGATAC+TGG | 0.415945 | 1_3:-9504099 | Msa0102650:CDS |
GAATTAGATTTGAATAGTAT+TGG | 0.417428 | 1_3:-9502374 | Msa0102650:CDS |
GCTGGTGGCGTTTCAGGGAT+GGG | 0.419252 | 1_3:-9501999 | Msa0102650:CDS |
AGGTATCGGTGTTGTAGATA+TGG | 0.420582 | 1_3:+9502715 | None:intergenic |
AAACTTCCTTGTTTCGGTAC+AGG | 0.423549 | 1_3:+9503754 | None:intergenic |
TTCAGCGGAGTTGCTTTGTC+TGG | 0.423774 | 1_3:+9502928 | None:intergenic |
GAGCAGGAACTAAATTATAA+AGG | 0.424074 | 1_3:-9503682 | Msa0102650:CDS |
CCTGAAACGCCACCAGCTCC+TGG | 0.426886 | 1_3:+9502005 | None:intergenic |
GGTACACAGCTTGGTTTAAA+CGG | 0.427299 | 1_3:-9501762 | Msa0102650:CDS |
CCGTCCTCTGATCTGAAGGT+TGG | 0.428181 | 1_3:+9502336 | None:intergenic |
CCTCTTGAGTCCACCATGTA+AGG | 0.431827 | 1_3:+9501870 | None:intergenic |
AACTGCGAAGACTCCAAGTC+AGG | 0.434097 | 1_3:+9502842 | None:intergenic |
TCGCCAGCCGCGTATGGATC+AGG | 0.434737 | 1_3:-9501903 | Msa0102650:CDS |
CGTCGCCGTGATTAGAAACT+TGG | 0.436512 | 1_3:+9503377 | None:intergenic |
GCACCAACAGAAACAGATTC+AGG | 0.440066 | 1_3:+9503622 | None:intergenic |
ACTTTGACTGAGATGAAAGA+TGG | 0.442066 | 1_3:-9504540 | Msa0102650:CDS |
GCCACTGTAAGTAACCTTCT+TGG | 0.442723 | 1_3:-9504198 | Msa0102650:CDS |
AGAACTCTTGTCAATAATGT+TGG | 0.444898 | 1_3:+9503303 | None:intergenic |
CAGCCATGCTCATAATATAT+GGG | 0.450624 | 1_3:+9501784 | None:intergenic |
CACAACCCCTTCTCGAGTGC+AGG | 0.453974 | 1_3:-9504514 | Msa0102650:CDS |
TTTGACAAGTGGAAAGAAGT+TGG | 0.454663 | 1_3:-9504135 | Msa0102650:CDS |
ACAGAAACAGATTCAGGCTT+AGG | 0.456277 | 1_3:+9503628 | None:intergenic |
GGGGCTGAGCGTAAGATGAT+AGG | 0.457202 | 1_3:+9501805 | None:intergenic |
AGAACAGAGCTATGGAAGAT+AGG | 0.458167 | 1_3:-9501638 | Msa0102650:CDS |
AAGTGGAAAGAAGTTGGAAA+TGG | 0.459088 | 1_3:-9504129 | Msa0102650:CDS |
CCCCGTTCACTGAAGACAAC+TGG | 0.460330 | 1_3:+9504034 | None:intergenic |
GCCAGAATGCATCCCTGACT+TGG | 0.466600 | 1_3:-9502855 | Msa0102650:CDS |
CGTCCTCTGATCTGAAGGTT+GGG | 0.467378 | 1_3:+9502337 | None:intergenic |
GAAGGAATCAGAACTATTTG+AGG | 0.468412 | 1_3:+9503186 | None:intergenic |
TCCCAACTTTGATCTTAACT+CGG | 0.470352 | 1_3:-9501724 | Msa0102650:CDS |
ACCCGAGTTAAGATCAAAGT+TGG | 0.470545 | 1_3:+9501722 | None:intergenic |
TGCTGATGTTTGTAGCCAAA+TGG | 0.472264 | 1_3:+9501540 | None:intergenic |
GGTTGGGAAACATATCCATT+TGG | 0.474328 | 1_3:-9501555 | Msa0102650:CDS |
CTACAGTTTGAAGGAACGCT+TGG | 0.475273 | 1_3:-9502641 | Msa0102650:CDS |
ACAGCCCCTCTACAGTTTGA+AGG | 0.475325 | 1_3:-9502650 | Msa0102650:CDS |
GTTTCCCAACCGCTACCATC+TGG | 0.477770 | 1_3:+9501567 | None:intergenic |
TCATTTAACTGTAAATCATC+AGG | 0.478423 | 1_3:+9503721 | None:intergenic |
TTCAACAATCCTCAAGTTCA+GGG | 0.479017 | 1_3:-9501611 | Msa0102650:CDS |
ACTGAAGCTTTAGATAGTTG+TGG | 0.480850 | 1_3:+9503418 | None:intergenic |
ATTGCTAGAATCCGTGGCTC+TGG | 0.481088 | 1_3:+9503441 | None:intergenic |
AGTGAGAAGCTAATTTCATC+AGG | 0.482419 | 1_3:-9504228 | Msa0102650:CDS |
CCATATATTATGAGCATGGC+TGG | 0.483020 | 1_3:-9501783 | Msa0102650:CDS |
AAAAGAATCAGAGCCATTTG+AGG | 0.484474 | 1_3:+9503351 | None:intergenic |
AGTAAATCAGTTTGAAAGTA+CGG | 0.485029 | 1_3:+9502209 | None:intergenic |
TTGAATAGTATTGGTGATGA+TGG | 0.487137 | 1_3:-9502365 | Msa0102650:CDS |
CCCTCCGTCCTCTGATCTGA+AGG | 0.487323 | 1_3:+9502332 | None:intergenic |
TGTTGTAGATATGGTATTTG+CGG | 0.487439 | 1_3:+9502724 | None:intergenic |
TCTTGCTCTATCTTGAACCT+TGG | 0.489350 | 1_3:+9504164 | None:intergenic |
GTTCATGTGTTGCGACTTGA+AGG | 0.489465 | 1_3:-9503997 | Msa0102650:CDS |
TTTGGCAAAGACCAAATTTG+AGG | 0.492121 | 1_3:+9502068 | None:intergenic |
CTGAACTTGAGGATTGTTGA+AGG | 0.492765 | 1_3:+9501613 | None:intergenic |
ACTGAAGCAGCTCAAGATCC+AGG | 0.493389 | 1_3:-9502818 | Msa0102650:CDS |
AAGAAGATTTGGTAGGCCCT+TGG | 0.495044 | 1_3:+9502183 | None:intergenic |
GGCACTATTGGTGCAGGCAC+AGG | 0.495570 | 1_3:+9503580 | None:intergenic |
CAGCTTGGTTTAAACGGTGT+TGG | 0.495798 | 1_3:-9501756 | Msa0102650:CDS |
AGCATGGCTGGTACACAGCT+TGG | 0.499968 | 1_3:-9501771 | Msa0102650:CDS |
CTTTGTCTGGATGACACCTC+GGG | 0.502499 | 1_3:+9502941 | None:intergenic |
TCCACTGATGATTGCCCAGA+AGG | 0.506454 | 1_3:+9502425 | None:intergenic |
CAGAAGAATGTTTCTGCTGG+TGG | 0.507286 | 1_3:-9502554 | Msa0102650:CDS |
CTTATCAATGAAGGAGGAGC+AGG | 0.507424 | 1_3:-9503698 | Msa0102650:CDS |
GGCAATCCTGAAGTCTGTGC+AGG | 0.508998 | 1_3:+9502674 | None:intergenic |
CTTTGACTGAGATGAAAGAT+GGG | 0.510506 | 1_3:-9504539 | Msa0102650:CDS |
GCCACCAACCCCTGAACTTG+AGG | 0.517663 | 1_3:+9501602 | None:intergenic |
CCCAACTTTGATCTTAACTC+GGG | 0.520919 | 1_3:-9501723 | Msa0102650:CDS |
CGGGTTTCATGATTGATGGC+GGG | 0.521501 | 1_3:-9501704 | Msa0102650:CDS |
TGGCGATGCAATAAGACAAT+GGG | 0.521998 | 1_3:-9504442 | Msa0102650:CDS |
GCGTTCCTTCAAACTGTAGA+GGG | 0.522910 | 1_3:+9502645 | None:intergenic |
CCACCTGATCCATACGCGGC+TGG | 0.523562 | 1_3:+9501900 | None:intergenic |
AAGCCTGAATCTGTTTCTGT+TGG | 0.524255 | 1_3:-9503625 | Msa0102650:CDS |
CCAACTCCTGCACTCGAGAA+GGG | 0.524276 | 1_3:+9504508 | None:intergenic |
GGTGCTCCTAATTTCTCTGG+AGG | 0.525103 | 1_3:+9503658 | None:intergenic |
GATGTCAAAAGCAGTGAAGT+TGG | 0.525752 | 1_3:-9503538 | Msa0102650:CDS |
GTTAAATGACTTATCAATGA+AGG | 0.527736 | 1_3:-9503707 | Msa0102650:CDS |
TTGGTCTTTGCCAAATGGCA+AGG | 0.528902 | 1_3:-9502060 | Msa0102650:CDS |
GTAAGATGATAGGACATTTG+AGG | 0.529359 | 1_3:+9501815 | None:intergenic |
AAGGAACGCTTGGATGGAAA+GGG | 0.529359 | 1_3:-9502631 | Msa0102650:CDS |
GCTGGCAGCGCGGAATCTGT+TGG | 0.530424 | 1_3:-9502992 | Msa0102650:CDS |
GAAGCAGAGACAACAGGTAT+CGG | 0.532277 | 1_3:+9502701 | None:intergenic |
GAAGGTGGAACGAGGCAAGC+TGG | 0.534105 | 1_3:-9503010 | Msa0102650:CDS |
CACGGCGACGATACCTCAAA+TGG | 0.534538 | 1_3:-9503364 | Msa0102650:CDS |
GCTCCGGTAGTACCTCAAGT+TGG | 0.535810 | 1_3:-9501846 | Msa0102650:CDS |
TCCTCAAGTTCAGGGGTTGG+TGG | 0.537669 | 1_3:-9501603 | Msa0102650:CDS |
TGATGCAGGACGAAAGGCAC+TGG | 0.538116 | 1_3:+9502598 | None:intergenic |
ACGAAAGGCACTGGTGGCAG+CGG | 0.538807 | 1_3:+9502607 | None:intergenic |
GAAGGAACGCTTGGATGGAA+AGG | 0.538921 | 1_3:-9502632 | Msa0102650:CDS |
ACCAACTCCTGCACTCGAGA+AGG | 0.540838 | 1_3:+9504507 | None:intergenic |
AGAACCAGATGGTAGCGGTT+GGG | 0.543187 | 1_3:-9501571 | Msa0102650:CDS |
GGTGGACTCAAGAGGAGCTC+CGG | 0.543800 | 1_3:-9501862 | Msa0102650:CDS |
CCCTTCTCGAGTGCAGGAGT+TGG | 0.544889 | 1_3:-9504508 | Msa0102650:CDS |
GAATGATTGTAGGATACCGC+AGG | 0.545072 | 1_3:+9501975 | None:intergenic |
GTGCTCCTAATTTCTCTGGA+GGG | 0.547044 | 1_3:+9503659 | None:intergenic |
GCCTTCTGGGCAATCATCAG+TGG | 0.549027 | 1_3:-9502426 | Msa0102650:CDS |
GACGATGATGATGCAGGTGA+TGG | 0.549546 | 1_3:+9502275 | None:intergenic |
TCTGGATGACACCTCGGGTA+GGG | 0.550771 | 1_3:+9502946 | None:intergenic |
AGCTAATTTCATCAGGAATG+TGG | 0.552057 | 1_3:-9504221 | Msa0102650:CDS |
GATTCAGGCACTATTGGTGC+AGG | 0.552270 | 1_3:+9503574 | None:intergenic |
GCTTTGTCTGGATGACACCT+CGG | 0.553283 | 1_3:+9502940 | None:intergenic |
AGTTTGAAGGAACGCTTGGA+TGG | 0.554006 | 1_3:-9502637 | Msa0102650:CDS |
AACTCTTGTCAATAATGTTG+GGG | 0.554203 | 1_3:+9503305 | None:intergenic |
GGCCAGTTGTCTTCAGTGAA+CGG | 0.554883 | 1_3:-9504036 | Msa0102650:CDS |
AAACTGATTTACTGGACCAA+GGG | 0.555008 | 1_3:-9502199 | Msa0102650:CDS |
TGTCAATTCACTTTCACTTG+AGG | 0.555058 | 1_3:+9503798 | None:intergenic |
CCCGAGTTAAGATCAAAGTT+GGG | 0.555258 | 1_3:+9501723 | None:intergenic |
AGGTGGTACAGTTCCTTACA+TGG | 0.559099 | 1_3:-9501883 | Msa0102650:CDS |
AGATACTCAGATACCAGATA+AGG | 0.560646 | 1_3:-9503947 | Msa0102650:CDS |
TTCCTCAGGACATGCTTCAG+CGG | 0.561075 | 1_3:+9502913 | None:intergenic |
AAGTCAAAACAGTAGTAAGA+TGG | 0.561949 | 1_3:+9503839 | None:intergenic |
AAATCAATGTTTCGAACTGA+CGG | 0.562322 | 1_3:+9502242 | None:intergenic |
AAAGCTTCAGTGGAGGAAGA+AGG | 0.562681 | 1_3:-9503406 | Msa0102650:CDS |
CTTACAATGATGCCAGGAGC+TGG | 0.565275 | 1_3:-9502017 | Msa0102650:CDS |
TCTTCAGAGAAAAGCTCAGA+AGG | 0.565440 | 1_3:-9503028 | Msa0102650:CDS |
AAGAACCAGATGGTAGCGGT+TGG | 0.566058 | 1_3:-9501572 | Msa0102650:CDS |
GTTAAGATCAAAGTTGGGAC+GGG | 0.566742 | 1_3:+9501728 | None:intergenic |
CATTAAGATCAAAGGTGCAA+AGG | 0.568125 | 1_3:+9502777 | None:intergenic |
CCTTCAGATCAGAGGACGGA+GGG | 0.568733 | 1_3:-9502332 | Msa0102650:CDS |
TCCGGTAGTACCTCAAGTTG+GGG | 0.568757 | 1_3:-9501844 | Msa0102650:CDS |
GCTAATTTCATCAGGAATGT+GGG | 0.570539 | 1_3:-9504220 | Msa0102650:CDS |
ACAACTATCTAAAGCTTCAG+TGG | 0.571210 | 1_3:-9503416 | Msa0102650:CDS |
AACAGCCAAGTTTCTAATCA+CGG | 0.572080 | 1_3:-9503382 | Msa0102650:CDS |
ATAGAGATGCATTGACTGCA+AGG | 0.572735 | 1_3:-9501680 | Msa0102650:CDS |
TCCTGGTCAGAACAGAGCTA+TGG | 0.573956 | 1_3:-9501646 | Msa0102650:CDS |
TTCACAATTCAAACTTGCAG+AGG | 0.574128 | 1_3:+9503882 | None:intergenic |
ATACTTGAAGAAGATTTGGT+AGG | 0.576252 | 1_3:+9502176 | None:intergenic |
ATATTCTTCATTAAGATCAA+AGG | 0.576467 | 1_3:+9502769 | None:intergenic |
CTGAAGCATGTCCTGAGGAA+AGG | 0.576650 | 1_3:-9502910 | Msa0102650:CDS |
CAACTCCTGCACTCGAGAAG+GGG | 0.576939 | 1_3:+9504509 | None:intergenic |
TCTTGGTCATCACAGCTCCA+AGG | 0.578227 | 1_3:-9504181 | Msa0102650:CDS |
GTTGGTCTCTGTGATGAAGA+AGG | 0.579660 | 1_3:-9504490 | Msa0102650:CDS |
CAATCCTCAAGTTCAGGGGT+TGG | 0.580162 | 1_3:-9501606 | Msa0102650:CDS |
CAAGAGCACTATTTGACAAG+TGG | 0.581259 | 1_3:-9504146 | Msa0102650:CDS |
ACGAGGTGATGCAGGACGAA+AGG | 0.582185 | 1_3:+9502592 | None:intergenic |
GTAGATCTTACAATGATGCC+AGG | 0.582215 | 1_3:-9502023 | Msa0102650:CDS |
ATCATTGTAAGATCTACTGC+AGG | 0.583726 | 1_3:+9502029 | None:intergenic |
AGCCATGCTCATAATATATG+GGG | 0.584863 | 1_3:+9501785 | None:intergenic |
AATTGAACTTGACTATGGTA+TGG | 0.586505 | 1_3:-9503113 | Msa0102650:CDS |
TCCATAGCTCTGTTCTGACC+AGG | 0.588974 | 1_3:+9501645 | None:intergenic |
GATAAGAATCTCAAGGAGGA+AGG | 0.590458 | 1_3:-9504057 | Msa0102650:CDS |
GTCTGGATGACACCTCGGGT+AGG | 0.590663 | 1_3:+9502945 | None:intergenic |
AGAAGAATGTTTCTGCTGGT+GGG | 0.590816 | 1_3:-9502553 | Msa0102650:CDS |
CAAACTGATTTACTGGACCA+AGG | 0.591390 | 1_3:-9502200 | Msa0102650:CDS |
AACTTACCTGTACCGAAACA+AGG | 0.592075 | 1_3:-9503760 | Msa0102650:CDS |
ACACTCATATGCCTTTCCTC+AGG | 0.593994 | 1_3:+9502899 | None:intergenic |
TGAACTTGAGGATTGTTGAA+GGG | 0.595658 | 1_3:+9501614 | None:intergenic |
TCAAACTGTAGAGGGGCTGT+TGG | 0.595682 | 1_3:+9502653 | None:intergenic |
TCATGTGTTGCGACTTGAAG+GGG | 0.596486 | 1_3:-9503995 | Msa0102650:CDS |
AGATCAAAGTTGGGACGGGA+AGG | 0.596681 | 1_3:+9501732 | None:intergenic |
AGTTAAGATCAAAGTTGGGA+CGG | 0.597365 | 1_3:+9501727 | None:intergenic |
CTGGCGATGCAATAAGACAA+TGG | 0.600185 | 1_3:-9504443 | Msa0102650:CDS |
GACAGTATTGTGAAGAACAC+TGG | 0.602791 | 1_3:-9504462 | Msa0102650:CDS |
ACTGCGAAGACTCCAAGTCA+GGG | 0.608574 | 1_3:+9502843 | None:intergenic |
ATTGACGACGATGATGATGC+AGG | 0.609742 | 1_3:+9502269 | None:intergenic |
ACTCTGATATTTCCAAACAA+AGG | 0.612301 | 1_3:-9502529 | Msa0102650:CDS |
CCTTACATGGTGGACTCAAG+AGG | 0.614111 | 1_3:-9501870 | Msa0102650:CDS |
TCGGGTTTCATGATTGATGG+CGG | 0.615028 | 1_3:-9501705 | Msa0102650:CDS |
TTGTGGATTGCTAGAATCCG+TGG | 0.616410 | 1_3:+9503435 | None:intergenic |
GGTGGATGGTGCCAGAGCCA+CGG | 0.617275 | 1_3:-9503452 | Msa0102650:CDS |
TATGATTGATAAGAATCTCA+AGG | 0.619192 | 1_3:-9504064 | Msa0102650:CDS |
AATCAGAAGAATGTTTCTGC+TGG | 0.619736 | 1_3:-9502557 | Msa0102650:CDS |
ACGATGATGATGCAGGTGAT+GGG | 0.620906 | 1_3:+9502276 | None:intergenic |
TCAGAGAAAAGCTCAGAAGG+TGG | 0.622813 | 1_3:-9503025 | Msa0102650:CDS |
AGCGTTCCTTCAAACTGTAG+AGG | 0.623038 | 1_3:+9502644 | None:intergenic |
ACAATGATGCCAGGAGCTGG+TGG | 0.623886 | 1_3:-9502014 | Msa0102650:CDS |
TATTGACAAGAGTTCTGACA+TGG | 0.626964 | 1_3:-9503296 | Msa0102650:CDS |
AGAAAAGAACCAGATGGTAG+CGG | 0.632014 | 1_3:-9501576 | Msa0102650:CDS |
TGCAGGACGAAAGGCACTGG+TGG | 0.633312 | 1_3:+9502601 | None:intergenic |
CTTCAGATCAGAGGACGGAG+GGG | 0.636341 | 1_3:-9502331 | Msa0102650:CDS |
CTCTGATAAAATGAGTGTGG+TGG | 0.638162 | 1_3:-9503470 | Msa0102650:CDS |
GATAAAATGAGTGTGGTGGA+TGG | 0.638209 | 1_3:-9503466 | Msa0102650:CDS |
AAAGTGAATTGACATCGTCT+GGG | 0.640193 | 1_3:-9503789 | Msa0102650:CDS |
ACCAAGAAGGTTACTTACAG+TGG | 0.640251 | 1_3:+9504197 | None:intergenic |
TTCATGTGTTGCGACTTGAA+GGG | 0.641389 | 1_3:-9503996 | Msa0102650:CDS |
AAATGACTTATCAATGAAGG+AGG | 0.646852 | 1_3:-9503704 | Msa0102650:CDS |
TGGTACAAATGATAGTGTCA+TGG | 0.647688 | 1_3:-9504301 | Msa0102650:CDS |
TTTGATCTGAATGTGGCTGG+GGG | 0.649877 | 1_3:-9502491 | Msa0102650:CDS |
TCAACAATCCTCAAGTTCAG+GGG | 0.649996 | 1_3:-9501610 | Msa0102650:CDS |
CTCCGCTGAAGCATGTCCTG+AGG | 0.650146 | 1_3:-9502915 | Msa0102650:CDS |
TGGAGCTGTGATGACCAAGA+AGG | 0.654122 | 1_3:+9504184 | None:intergenic |
GGCAAAAGAAAAGAACCAGA+TGG | 0.656215 | 1_3:-9501582 | Msa0102650:CDS |
CCAGTTGTCTTCAGTGAACG+GGG | 0.656595 | 1_3:-9504034 | Msa0102650:CDS |
TTATTCAATTAGAAGGACCG+TGG | 0.658634 | 1_3:-9504365 | Msa0102650:CDS |
AACATCAGCAACAACCTCCG+TGG | 0.660346 | 1_3:-9501527 | Msa0102650:CDS |
ATATATTAGAGCTACTTCCA+CGG | 0.662581 | 1_3:+9501510 | None:intergenic |
ACTATCTAAAGCTTCAGTGG+AGG | 0.665990 | 1_3:-9503413 | Msa0102650:CDS |
CCAGCCGCGTATGGATCAGG+TGG | 0.671996 | 1_3:-9501900 | Msa0102650:CDS |
ATACCCAACCTTCAGATCAG+AGG | 0.672745 | 1_3:-9502340 | Msa0102650:CDS |
CGTTTCAGGGATGGGCCCTG+CGG | 0.673116 | 1_3:-9501991 | Msa0102650:CDS |
AATGATTGTAGGATACCGCA+GGG | 0.677137 | 1_3:+9501976 | None:intergenic |
CGTTCCTTCAAACTGTAGAG+GGG | 0.681833 | 1_3:+9502646 | None:intergenic |
CATGTGTTGCGACTTGAAGG+GGG | 0.682268 | 1_3:-9503994 | Msa0102650:CDS |
TGTTGCTCGACAAGTTGCTG+AGG | 0.683361 | 1_3:-9503242 | Msa0102650:CDS |
ACCTTCAGATCAGAGGACGG+AGG | 0.684461 | 1_3:-9502333 | Msa0102650:CDS |
CCTCGGGTAGGGCACATGCA+AGG | 0.684676 | 1_3:+9502957 | None:intergenic |
CCTTGCATGTGCCCTACCCG+AGG | 0.686486 | 1_3:-9502957 | Msa0102650:CDS |
GCCATGCTCATAATATATGG+GGG | 0.686789 | 1_3:+9501786 | None:intergenic |
TGCCTCTGATAAAATGAGTG+TGG | 0.687179 | 1_3:-9503473 | Msa0102650:CDS |
AGTCGCTCGACAAGTTGCTG+AGG | 0.692831 | 1_3:-9503077 | Msa0102650:CDS |
TGTACCACCTGATCCATACG+CGG | 0.695609 | 1_3:+9501896 | None:intergenic |
AAAGCTCAGAAGGTGGAACG+AGG | 0.698086 | 1_3:-9503018 | Msa0102650:CDS |
AACGAGGCAAGCTGGCAGCG+CGG | 0.702174 | 1_3:-9503002 | Msa0102650:CDS |
CCAACCTTCAGATCAGAGGA+CGG | 0.705098 | 1_3:-9502336 | Msa0102650:CDS |
AACCATCTATCAATGAACCA+CGG | 0.715390 | 1_3:+9504348 | None:intergenic |
TGGTACAGTTCCTTACATGG+TGG | 0.722506 | 1_3:-9501880 | Msa0102650:CDS |
CCGGTAGTACCTCAAGTTGG+GGG | 0.731940 | 1_3:-9501843 | Msa0102650:CDS |
GATTGATAAGAATCTCAAGG+AGG | 0.757896 | 1_3:-9504061 | Msa0102650:CDS |
TATTAGAGCTACTTCCACGG+AGG | 0.760756 | 1_3:+9501513 | None:intergenic |
GAAGCAGCTCAAGATCCAGG+AGG | 0.773089 | 1_3:-9502815 | Msa0102650:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATGATGCTCAAAAATT+GGG | - | chr1_3:9501755-9501774 | Msa0102650:CDS | 20.0% |
!! | ATATTCTTCATTAAGATCAA+AGG | + | chr1_3:9503316-9503335 | None:intergenic | 20.0% |
!! | TTTGATCTTAATGAAGAATA+TGG | - | chr1_3:9503315-9503334 | Msa0102650:CDS | 20.0% |
!! | GAATTAGATTTGAATAGTAT+TGG | - | chr1_3:9503708-9503727 | Msa0102650:CDS | 20.0% |
!!! | TACAATCATTCAACTTTTTT+GGG | - | chr1_3:9504119-9504138 | Msa0102650:CDS | 20.0% |
! | CTAATTGAATAAAAAGGTCA+AGG | + | chr1_3:9501709-9501728 | None:intergenic | 25.0% |
!! | GACCTTTTTATTCAATTAGA+AGG | - | chr1_3:9501710-9501729 | Msa0102650:CDS | 25.0% |
! | GTCCTTCTAATTGAATAAAA+AGG | + | chr1_3:9501715-9501734 | None:intergenic | 25.0% |
! | GTTAAATGATGCTCAAAAAT+TGG | - | chr1_3:9501754-9501773 | Msa0102650:CDS | 25.0% |
! | TGAGATTCTTATCAATCATA+TGG | + | chr1_3:9502018-9502037 | None:intergenic | 25.0% |
! | TATGATTGATAAGAATCTCA+AGG | - | chr1_3:9502018-9502037 | Msa0102650:CDS | 25.0% |
! | TCATTTAACTGTAAATCATC+AGG | + | chr1_3:9502364-9502383 | None:intergenic | 25.0% |
! | GTTAAATGACTTATCAATGA+AGG | - | chr1_3:9502375-9502394 | Msa0102650:CDS | 25.0% |
! | TGTGATAAAGTAATAGTTTC+TGG | - | chr1_3:9502571-9502590 | Msa0102650:CDS | 25.0% |
! | AAGTTCAATTTCAGAATTCT+TGG | + | chr1_3:9502959-9502978 | None:intergenic | 25.0% |
!! | CAAATCTCTTTGATCTTTTA+GGG | + | chr1_3:9503689-9503708 | None:intergenic | 25.0% |
!! | TCAAATCTCTTTGATCTTTT+AGG | + | chr1_3:9503690-9503709 | None:intergenic | 25.0% |
! | AGTAAATCAGTTTGAAAGTA+CGG | + | chr1_3:9503876-9503895 | None:intergenic | 25.0% |
! | TTCAATACTTGAAGAAGATT+TGG | + | chr1_3:9503913-9503932 | None:intergenic | 25.0% |
!!! | TCTTCAAGTATTGAAGTATA+TGG | - | chr1_3:9503918-9503937 | Msa0102650:CDS | 25.0% |
! | CAAAAAAGTTGAATGATTGT+AGG | + | chr1_3:9504120-9504139 | None:intergenic | 25.0% |
!!! | CTACAATCATTCAACTTTTT+TGG | - | chr1_3:9504118-9504137 | Msa0102650:CDS | 25.0% |
!!! | TCAACTTTTTTGGGATATAA+TGG | - | chr1_3:9504128-9504147 | Msa0102650:CDS | 25.0% |
AAGTCAAAACAGTAGTAAGA+TGG | + | chr1_3:9502246-9502265 | None:intergenic | 30.0% | |
!! | TCTTTGAAACTTCCTTGTTT+CGG | + | chr1_3:9502337-9502356 | None:intergenic | 30.0% |
AAATGACTTATCAATGAAGG+AGG | - | chr1_3:9502378-9502397 | Msa0102650:CDS | 30.0% | |
GAGCAGGAACTAAATTATAA+AGG | - | chr1_3:9502400-9502419 | Msa0102650:CDS | 30.0% | |
AACTCTTGTCAATAATGTTG+GGG | + | chr1_3:9502780-9502799 | None:intergenic | 30.0% | |
GAACTCTTGTCAATAATGTT+GGG | + | chr1_3:9502781-9502800 | None:intergenic | 30.0% | |
AGAACTCTTGTCAATAATGT+TGG | + | chr1_3:9502782-9502801 | None:intergenic | 30.0% | |
! | TCTGAAATTGAACTTGACTA+TGG | - | chr1_3:9502964-9502983 | Msa0102650:CDS | 30.0% |
AATTGAACTTGACTATGGTA+TGG | - | chr1_3:9502969-9502988 | Msa0102650:CDS | 30.0% | |
TGTTGTAGATATGGTATTTG+CGG | + | chr1_3:9503361-9503380 | None:intergenic | 30.0% | |
! | TGATTATCAGCATTTTTACG+AGG | + | chr1_3:9503510-9503529 | None:intergenic | 30.0% |
ACTCTGATATTTCCAAACAA+AGG | - | chr1_3:9503553-9503572 | Msa0102650:CDS | 30.0% | |
AAGAAAATCTTGCCTTTGTT+TGG | + | chr1_3:9503568-9503587 | None:intergenic | 30.0% | |
!! | TCTTGATTTTGATCTGAATG+TGG | - | chr1_3:9503584-9503603 | Msa0102650:CDS | 30.0% |
AAACAAATTGGTGAATCTTC+AGG | - | chr1_3:9503630-9503649 | Msa0102650:CDS | 30.0% | |
!! | TTGAATAGTATTGGTGATGA+TGG | - | chr1_3:9503717-9503736 | Msa0102650:CDS | 30.0% |
AAATCAATGTTTCGAACTGA+CGG | + | chr1_3:9503843-9503862 | None:intergenic | 30.0% | |
! | GTACTTTCAAACTGATTTAC+TGG | - | chr1_3:9503875-9503894 | Msa0102650:CDS | 30.0% |
! | ATACTTGAAGAAGATTTGGT+AGG | + | chr1_3:9503909-9503928 | None:intergenic | 30.0% |
ACTTTGACTGAGATGAAAGA+TGG | - | chr1_3:9501542-9501561 | Msa0102650:CDS | 35.0% | |
CTTTGACTGAGATGAAAGAT+GGG | - | chr1_3:9501543-9501562 | Msa0102650:CDS | 35.0% | |
TTATTCAATTAGAAGGACCG+TGG | - | chr1_3:9501717-9501736 | Msa0102650:CDS | 35.0% | |
AACCATCTATCAATGAACCA+CGG | + | chr1_3:9501737-9501756 | None:intergenic | 35.0% | |
AATGATGCTCAAAAATTGGG+TGG | - | chr1_3:9501758-9501777 | Msa0102650:CDS | 35.0% | |
! | TGGTACAAATGATAGTGTCA+TGG | - | chr1_3:9501781-9501800 | Msa0102650:CDS | 35.0% |
AGTGAGAAGCTAATTTCATC+AGG | - | chr1_3:9501854-9501873 | Msa0102650:CDS | 35.0% | |
AGCTAATTTCATCAGGAATG+TGG | - | chr1_3:9501861-9501880 | Msa0102650:CDS | 35.0% | |
GCTAATTTCATCAGGAATGT+GGG | - | chr1_3:9501862-9501881 | Msa0102650:CDS | 35.0% | |
TTTGACAAGTGGAAAGAAGT+TGG | - | chr1_3:9501947-9501966 | Msa0102650:CDS | 35.0% | |
AAGTGGAAAGAAGTTGGAAA+TGG | - | chr1_3:9501953-9501972 | Msa0102650:CDS | 35.0% | |
AGATGCTAAGTCTCATGATA+TGG | - | chr1_3:9501976-9501995 | Msa0102650:CDS | 35.0% | |
AAGTCTCATGATATGGATAC+TGG | - | chr1_3:9501983-9502002 | Msa0102650:CDS | 35.0% | |
GATTGATAAGAATCTCAAGG+AGG | - | chr1_3:9502021-9502040 | Msa0102650:CDS | 35.0% | |
AGATACTCAGATACCAGATA+AGG | - | chr1_3:9502135-9502154 | Msa0102650:CDS | 35.0% | |
! | TTAACATTAGCAGCCTTATC+TGG | + | chr1_3:9502151-9502170 | None:intergenic | 35.0% |
TTCACAATTCAAACTTGCAG+AGG | + | chr1_3:9502203-9502222 | None:intergenic | 35.0% | |
TGTCAATTCACTTTCACTTG+AGG | + | chr1_3:9502287-9502306 | None:intergenic | 35.0% | |
AAAGTGAATTGACATCGTCT+GGG | - | chr1_3:9502293-9502312 | Msa0102650:CDS | 35.0% | |
GATTCAGGCTTAGGATTTAT+TGG | + | chr1_3:9502448-9502467 | None:intergenic | 35.0% | |
AAAGAAGATTCAGGCACTAT+TGG | + | chr1_3:9502517-9502536 | None:intergenic | 35.0% | |
AATAGTGCCTGAATCTTCTT+TGG | - | chr1_3:9502516-9502535 | Msa0102650:CDS | 35.0% | |
TCATGTTCCAAAGAAGATTC+AGG | + | chr1_3:9502526-9502545 | None:intergenic | 35.0% | |
!! | ACTGAAGCTTTAGATAGTTG+TGG | + | chr1_3:9502667-9502686 | None:intergenic | 35.0% |
! | ACAACTATCTAAAGCTTCAG+TGG | - | chr1_3:9502666-9502685 | Msa0102650:CDS | 35.0% |
AACAGCCAAGTTTCTAATCA+CGG | - | chr1_3:9502700-9502719 | Msa0102650:CDS | 35.0% | |
AAAAGAATCAGAGCCATTTG+AGG | + | chr1_3:9502734-9502753 | None:intergenic | 35.0% | |
! | TATTGACAAGAGTTCTGACA+TGG | - | chr1_3:9502786-9502805 | Msa0102650:CDS | 35.0% |
TCTGACATGGAACTTGATTA+TGG | - | chr1_3:9502799-9502818 | Msa0102650:CDS | 35.0% | |
GAAGGAATCAGAACTATTTG+AGG | + | chr1_3:9502899-9502918 | None:intergenic | 35.0% | |
! | CATTAAGATCAAAGGTGCAA+AGG | + | chr1_3:9503308-9503327 | None:intergenic | 35.0% |
! | AATCAGAAGAATGTTTCTGC+TGG | - | chr1_3:9503525-9503544 | Msa0102650:CDS | 35.0% |
!! | ATTTTGATCTGAATGTGGCT+GGG | - | chr1_3:9503589-9503608 | Msa0102650:CDS | 35.0% |
GATGAACTGGCAAAACAAAT+TGG | - | chr1_3:9503618-9503637 | Msa0102650:CDS | 35.0% | |
! | TCTTTGGAAGAAATGGCTAT+TGG | - | chr1_3:9503781-9503800 | Msa0102650:CDS | 35.0% |
! | AAACTGATTTACTGGACCAA+GGG | - | chr1_3:9503883-9503902 | Msa0102650:CDS | 35.0% |
! | AAGAGCATGTTCCTCAAATT+TGG | - | chr1_3:9504003-9504022 | Msa0102650:CDS | 35.0% |
TTTGGCAAAGACCAAATTTG+AGG | + | chr1_3:9504017-9504036 | None:intergenic | 35.0% | |
! | CAAATTTGGTCTTTGCCAAA+TGG | - | chr1_3:9504017-9504036 | Msa0102650:CDS | 35.0% |
ATCATTGTAAGATCTACTGC+AGG | + | chr1_3:9504056-9504075 | None:intergenic | 35.0% | |
GTAAGATGATAGGACATTTG+AGG | + | chr1_3:9504270-9504289 | None:intergenic | 35.0% | |
AGCCATGCTCATAATATATG+GGG | + | chr1_3:9504300-9504319 | None:intergenic | 35.0% | |
CAGCCATGCTCATAATATAT+GGG | + | chr1_3:9504301-9504320 | None:intergenic | 35.0% | |
AGTTAAGATCAAAGTTGGGA+CGG | + | chr1_3:9504358-9504377 | None:intergenic | 35.0% | |
TCCCAACTTTGATCTTAACT+CGG | - | chr1_3:9504358-9504377 | Msa0102650:CDS | 35.0% | |
TTCTGACCAGGAAAGAAAAA+CGG | + | chr1_3:9504428-9504447 | None:intergenic | 35.0% | |
TGAACTTGAGGATTGTTGAA+GGG | + | chr1_3:9504471-9504490 | None:intergenic | 35.0% | |
TTCAACAATCCTCAAGTTCA+GGG | - | chr1_3:9504471-9504490 | Msa0102650:CDS | 35.0% | |
GACAGTATTGTGAAGAACAC+TGG | - | chr1_3:9501620-9501639 | Msa0102650:CDS | 40.0% | |
TGGCGATGCAATAAGACAAT+GGG | - | chr1_3:9501640-9501659 | Msa0102650:CDS | 40.0% | |
ACCAAGAAGGTTACTTACAG+TGG | + | chr1_3:9501888-9501907 | None:intergenic | 40.0% | |
TCTTGCTCTATCTTGAACCT+TGG | + | chr1_3:9501921-9501940 | None:intergenic | 40.0% | |
!! | CAAGAGCACTATTTGACAAG+TGG | - | chr1_3:9501936-9501955 | Msa0102650:CDS | 40.0% |
GATAAGAATCTCAAGGAGGA+AGG | - | chr1_3:9502025-9502044 | Msa0102650:CDS | 40.0% | |
TTCATGTGTTGCGACTTGAA+GGG | - | chr1_3:9502086-9502105 | Msa0102650:CDS | 40.0% | |
GAAAGTGAATTGACATCGTC+TGG | - | chr1_3:9502292-9502311 | Msa0102650:CDS | 40.0% | |
AACTTACCTGTACCGAAACA+AGG | - | chr1_3:9502322-9502341 | Msa0102650:CDS | 40.0% | |
! | AAACTTCCTTGTTTCGGTAC+AGG | + | chr1_3:9502331-9502350 | None:intergenic | 40.0% |
! | ATTGGTGCTCCTAATTTCTC+TGG | + | chr1_3:9502430-9502449 | None:intergenic | 40.0% |
ACAGAAACAGATTCAGGCTT+AGG | + | chr1_3:9502457-9502476 | None:intergenic | 40.0% | |
!! | AAGCCTGAATCTGTTTCTGT+TGG | - | chr1_3:9502457-9502476 | Msa0102650:CDS | 40.0% |
GATGTCAAAAGCAGTGAAGT+TGG | - | chr1_3:9502544-9502563 | Msa0102650:CDS | 40.0% | |
TGCCTCTGATAAAATGAGTG+TGG | - | chr1_3:9502609-9502628 | Msa0102650:CDS | 40.0% | |
! | CACCACACTCATTTTATCAG+AGG | + | chr1_3:9502614-9502633 | None:intergenic | 40.0% |
CTCTGATAAAATGAGTGTGG+TGG | - | chr1_3:9502612-9502631 | Msa0102650:CDS | 40.0% | |
! | GATAAAATGAGTGTGGTGGA+TGG | - | chr1_3:9502616-9502635 | Msa0102650:CDS | 40.0% |
! | ACTATCTAAAGCTTCAGTGG+AGG | - | chr1_3:9502669-9502688 | Msa0102650:CDS | 40.0% |
TCAATAATGTTGGGGCTTGT+CGG | + | chr1_3:9502772-9502791 | None:intergenic | 40.0% | |
GGAAACTTTGCTCTGTTTGA+AGG | + | chr1_3:9502917-9502936 | None:intergenic | 40.0% | |
TCTTCAGAGAAAAGCTCAGA+AGG | - | chr1_3:9503054-9503073 | Msa0102650:CDS | 40.0% | |
! | CTTTTCTCTGAATTACCTCC+TGG | + | chr1_3:9503285-9503304 | None:intergenic | 40.0% |
!! | AGGTATCGGTGTTGTAGATA+TGG | + | chr1_3:9503370-9503389 | None:intergenic | 40.0% |
! | AGAAGAATGTTTCTGCTGGT+GGG | - | chr1_3:9503529-9503548 | Msa0102650:CDS | 40.0% |
!! | GATTTTGATCTGAATGTGGC+TGG | - | chr1_3:9503588-9503607 | Msa0102650:CDS | 40.0% |
! | TTTTGATCTGAATGTGGCTG+GGG | - | chr1_3:9503590-9503609 | Msa0102650:CDS | 40.0% |
! | CAGCTCTTCTTTGGAAGAAA+TGG | - | chr1_3:9503774-9503793 | Msa0102650:CDS | 40.0% |
! | CAAACTGATTTACTGGACCA+AGG | - | chr1_3:9503882-9503901 | Msa0102650:CDS | 40.0% |
!! | TATTGCAGGAGCATCTGATT+TGG | + | chr1_3:9503949-9503968 | None:intergenic | 40.0% |
!!! | TGCTCCTGCAATATCGATTT+TGG | - | chr1_3:9503956-9503975 | Msa0102650:CDS | 40.0% |
!!! | GCTCCTGCAATATCGATTTT+GGG | - | chr1_3:9503957-9503976 | Msa0102650:CDS | 40.0% |
!!! | CTCCTGCAATATCGATTTTG+GGG | - | chr1_3:9503958-9503977 | Msa0102650:CDS | 40.0% |
!!! | TCCTGCAATATCGATTTTGG+GGG | - | chr1_3:9503959-9503978 | Msa0102650:CDS | 40.0% |
!!! | TTTTCTACCGATTTCCACCT+TGG | + | chr1_3:9503985-9504004 | None:intergenic | 40.0% |
GTAGATCTTACAATGATGCC+AGG | - | chr1_3:9504059-9504078 | Msa0102650:CDS | 40.0% | |
AATGATTGTAGGATACCGCA+GGG | + | chr1_3:9504109-9504128 | None:intergenic | 40.0% | |
GCCATGCTCATAATATATGG+GGG | + | chr1_3:9504299-9504318 | None:intergenic | 40.0% | |
CCAGCCATGCTCATAATATA+TGG | + | chr1_3:9504302-9504321 | None:intergenic | 40.0% | |
CCATATATTATGAGCATGGC+TGG | - | chr1_3:9504299-9504318 | Msa0102650:CDS | 40.0% | |
GGTACACAGCTTGGTTTAAA+CGG | - | chr1_3:9504320-9504339 | Msa0102650:CDS | 40.0% | |
GTTAAGATCAAAGTTGGGAC+GGG | + | chr1_3:9504357-9504376 | None:intergenic | 40.0% | |
CCCGAGTTAAGATCAAAGTT+GGG | + | chr1_3:9504362-9504381 | None:intergenic | 40.0% | |
CCCAACTTTGATCTTAACTC+GGG | - | chr1_3:9504359-9504378 | Msa0102650:CDS | 40.0% | |
ACCCGAGTTAAGATCAAAGT+TGG | + | chr1_3:9504363-9504382 | None:intergenic | 40.0% | |
AACTCGGGTTTCATGATTGA+TGG | - | chr1_3:9504374-9504393 | Msa0102650:CDS | 40.0% | |
!! | ATAGAGATGCATTGACTGCA+AGG | - | chr1_3:9504402-9504421 | Msa0102650:CDS | 40.0% |
AGAACAGAGCTATGGAAGAT+AGG | - | chr1_3:9504444-9504463 | Msa0102650:CDS | 40.0% | |
CTGAACTTGAGGATTGTTGA+AGG | + | chr1_3:9504472-9504491 | None:intergenic | 40.0% | |
CTTCAACAATCCTCAAGTTC+AGG | - | chr1_3:9504470-9504489 | Msa0102650:CDS | 40.0% | |
TCAACAATCCTCAAGTTCAG+GGG | - | chr1_3:9504472-9504491 | Msa0102650:CDS | 40.0% | |
GGCAAAAGAAAAGAACCAGA+TGG | - | chr1_3:9504500-9504519 | Msa0102650:CDS | 40.0% | |
AGAAAAGAACCAGATGGTAG+CGG | - | chr1_3:9504506-9504525 | Msa0102650:CDS | 40.0% | |
GGTTGGGAAACATATCCATT+TGG | - | chr1_3:9504527-9504546 | Msa0102650:CDS | 40.0% | |
TGCTGATGTTTGTAGCCAAA+TGG | + | chr1_3:9504545-9504564 | None:intergenic | 40.0% | |
! | GTTGGTCTCTGTGATGAAGA+AGG | - | chr1_3:9501592-9501611 | Msa0102650:CDS | 45.0% |
CTGGCGATGCAATAAGACAA+TGG | - | chr1_3:9501639-9501658 | Msa0102650:CDS | 45.0% | |
GACCGTGGTTCATTGATAGA+TGG | - | chr1_3:9501732-9501751 | Msa0102650:CDS | 45.0% | |
GATGCTCAAAAATTGGGTGG+TGG | - | chr1_3:9501761-9501780 | Msa0102650:CDS | 45.0% | |
GCCACTGTAAGTAACCTTCT+TGG | - | chr1_3:9501884-9501903 | Msa0102650:CDS | 45.0% | |
GTTCATGTGTTGCGACTTGA+AGG | - | chr1_3:9502085-9502104 | Msa0102650:CDS | 45.0% | |
TCATGTGTTGCGACTTGAAG+GGG | - | chr1_3:9502087-9502106 | Msa0102650:CDS | 45.0% | |
CTTATCAATGAAGGAGGAGC+AGG | - | chr1_3:9502384-9502403 | Msa0102650:CDS | 45.0% | |
AAAGGCCCTCCAGAGAAATT+AGG | - | chr1_3:9502418-9502437 | Msa0102650:CDS | 45.0% | |
GTGCTCCTAATTTCTCTGGA+GGG | + | chr1_3:9502426-9502445 | None:intergenic | 45.0% | |
GCACCAACAGAAACAGATTC+AGG | + | chr1_3:9502463-9502482 | None:intergenic | 45.0% | |
! | TTGTGGATTGCTAGAATCCG+TGG | + | chr1_3:9502650-9502669 | None:intergenic | 45.0% |
AAAGCTTCAGTGGAGGAAGA+AGG | - | chr1_3:9502676-9502695 | Msa0102650:CDS | 45.0% | |
TCAGAGAAAAGCTCAGAAGG+TGG | - | chr1_3:9503057-9503076 | Msa0102650:CDS | 45.0% | |
ACACTCATATGCCTTTCCTC+AGG | + | chr1_3:9503186-9503205 | None:intergenic | 45.0% | |
GAAGCAGAGACAACAGGTAT+CGG | + | chr1_3:9503384-9503403 | None:intergenic | 45.0% | |
!!! | GGTTTTGAAGCAGAGACAAC+AGG | + | chr1_3:9503390-9503409 | None:intergenic | 45.0% |
TCAAAACCTGCACAGACTTC+AGG | - | chr1_3:9503402-9503421 | Msa0102650:CDS | 45.0% | |
CGTTCCTTCAAACTGTAGAG+GGG | + | chr1_3:9503439-9503458 | None:intergenic | 45.0% | |
GCGTTCCTTCAAACTGTAGA+GGG | + | chr1_3:9503440-9503459 | None:intergenic | 45.0% | |
AGCGTTCCTTCAAACTGTAG+AGG | + | chr1_3:9503441-9503460 | None:intergenic | 45.0% | |
CTACAGTTTGAAGGAACGCT+TGG | - | chr1_3:9503441-9503460 | Msa0102650:CDS | 45.0% | |
AGTTTGAAGGAACGCTTGGA+TGG | - | chr1_3:9503445-9503464 | Msa0102650:CDS | 45.0% | |
AAGGAACGCTTGGATGGAAA+GGG | - | chr1_3:9503451-9503470 | Msa0102650:CDS | 45.0% | |
! | GCATTTTTACGAGGTGATGC+AGG | + | chr1_3:9503501-9503520 | None:intergenic | 45.0% |
! | CAGAAGAATGTTTCTGCTGG+TGG | - | chr1_3:9503528-9503547 | Msa0102650:CDS | 45.0% |
TTTGATCTGAATGTGGCTGG+GGG | - | chr1_3:9503591-9503610 | Msa0102650:CDS | 45.0% | |
AATCTTCAGGCTTGCCTTCT+GGG | - | chr1_3:9503643-9503662 | Msa0102650:CDS | 45.0% | |
ATACCCAACCTTCAGATCAG+AGG | - | chr1_3:9503742-9503761 | Msa0102650:CDS | 45.0% | |
! | ACGATGATGATGCAGGTGAT+GGG | + | chr1_3:9503809-9503828 | None:intergenic | 45.0% |
! | ATTGACGACGATGATGATGC+AGG | + | chr1_3:9503816-9503835 | None:intergenic | 45.0% |
! | AAGAAGATTTGGTAGGCCCT+TGG | + | chr1_3:9503902-9503921 | None:intergenic | 45.0% |
!!! | AATATCGATTTTGGGGGCCA+AGG | - | chr1_3:9503965-9503984 | Msa0102650:CDS | 45.0% |
! | TTGGTCTTTGCCAAATGGCA+AGG | - | chr1_3:9504022-9504041 | Msa0102650:CDS | 45.0% |
GAATGATTGTAGGATACCGC+AGG | + | chr1_3:9504110-9504129 | None:intergenic | 45.0% | |
AGGTGGTACAGTTCCTTACA+TGG | - | chr1_3:9504199-9504218 | Msa0102650:CDS | 45.0% | |
TGGTACAGTTCCTTACATGG+TGG | - | chr1_3:9504202-9504221 | Msa0102650:CDS | 45.0% | |
GCCCCCATATATTATGAGCA+TGG | - | chr1_3:9504295-9504314 | Msa0102650:CDS | 45.0% | |
CAGCTTGGTTTAAACGGTGT+TGG | - | chr1_3:9504326-9504345 | Msa0102650:CDS | 45.0% | |
TCGGGTTTCATGATTGATGG+CGG | - | chr1_3:9504377-9504396 | Msa0102650:CDS | 45.0% | |
TGGAGCTGTGATGACCAAGA+AGG | + | chr1_3:9501901-9501920 | None:intergenic | 50.0% | |
TCTTGGTCATCACAGCTCCA+AGG | - | chr1_3:9501901-9501920 | Msa0102650:CDS | 50.0% | |
GGCCAGTTGTCTTCAGTGAA+CGG | - | chr1_3:9502046-9502065 | Msa0102650:CDS | 50.0% | |
GCCAGTTGTCTTCAGTGAAC+GGG | - | chr1_3:9502047-9502066 | Msa0102650:CDS | 50.0% | |
CCAGTTGTCTTCAGTGAACG+GGG | - | chr1_3:9502048-9502067 | Msa0102650:CDS | 50.0% | |
CATGTGTTGCGACTTGAAGG+GGG | - | chr1_3:9502088-9502107 | Msa0102650:CDS | 50.0% | |
GGTGCTCCTAATTTCTCTGG+AGG | + | chr1_3:9502427-9502446 | None:intergenic | 50.0% | |
GATTCAGGCACTATTGGTGC+AGG | + | chr1_3:9502511-9502530 | None:intergenic | 50.0% | |
ATTGCTAGAATCCGTGGCTC+TGG | + | chr1_3:9502644-9502663 | None:intergenic | 50.0% | |
CGTCGCCGTGATTAGAAACT+TGG | + | chr1_3:9502708-9502727 | None:intergenic | 50.0% | |
TGTTGCTCGACAAGTTGCTG+AGG | - | chr1_3:9502840-9502859 | Msa0102650:CDS | 50.0% | |
GGTCACAATGTTAGCGCTTC+TGG | + | chr1_3:9502938-9502957 | None:intergenic | 50.0% | |
AAAGCTCAGAAGGTGGAACG+AGG | - | chr1_3:9503064-9503083 | Msa0102650:CDS | 50.0% | |
CTTTGTCTGGATGACACCTC+GGG | + | chr1_3:9503144-9503163 | None:intergenic | 50.0% | |
GCTTTGTCTGGATGACACCT+CGG | + | chr1_3:9503145-9503164 | None:intergenic | 50.0% | |
! | TTCAGCGGAGTTGCTTTGTC+TGG | + | chr1_3:9503157-9503176 | None:intergenic | 50.0% |
TTCCTCAGGACATGCTTCAG+CGG | + | chr1_3:9503172-9503191 | None:intergenic | 50.0% | |
CTGAAGCATGTCCTGAGGAA+AGG | - | chr1_3:9503172-9503191 | Msa0102650:CDS | 50.0% | |
TCCAAGTCAGGGATGCATTC+TGG | + | chr1_3:9503231-9503250 | None:intergenic | 50.0% | |
ACTGCGAAGACTCCAAGTCA+GGG | + | chr1_3:9503242-9503261 | None:intergenic | 50.0% | |
AACTGCGAAGACTCCAAGTC+AGG | + | chr1_3:9503243-9503262 | None:intergenic | 50.0% | |
ACTGAAGCAGCTCAAGATCC+AGG | - | chr1_3:9503264-9503283 | Msa0102650:CDS | 50.0% | |
TCAAACTGTAGAGGGGCTGT+TGG | + | chr1_3:9503432-9503451 | None:intergenic | 50.0% | |
ACAGCCCCTCTACAGTTTGA+AGG | - | chr1_3:9503432-9503451 | Msa0102650:CDS | 50.0% | |
GAAGGAACGCTTGGATGGAA+AGG | - | chr1_3:9503450-9503469 | Msa0102650:CDS | 50.0% | |
GAATCTTCAGGCTTGCCTTC+TGG | - | chr1_3:9503642-9503661 | Msa0102650:CDS | 50.0% | |
TCCACTGATGATTGCCCAGA+AGG | + | chr1_3:9503660-9503679 | None:intergenic | 50.0% | |
CGTCCTCTGATCTGAAGGTT+GGG | + | chr1_3:9503748-9503767 | None:intergenic | 50.0% | |
CCAACCTTCAGATCAGAGGA+CGG | - | chr1_3:9503746-9503765 | Msa0102650:CDS | 50.0% | |
! | GACGATGATGATGCAGGTGA+TGG | + | chr1_3:9503810-9503829 | None:intergenic | 50.0% |
GCCCCCAAAATCGATATTGC+AGG | + | chr1_3:9503963-9503982 | None:intergenic | 50.0% | |
CTTACAATGATGCCAGGAGC+TGG | - | chr1_3:9504065-9504084 | Msa0102650:CDS | 50.0% | |
GCTGGCGAAAAAGACAAAGG+GGG | + | chr1_3:9504167-9504186 | None:intergenic | 50.0% | |
GGCTGGCGAAAAAGACAAAG+GGG | + | chr1_3:9504168-9504187 | None:intergenic | 50.0% | |
CGGCTGGCGAAAAAGACAAA+GGG | + | chr1_3:9504169-9504188 | None:intergenic | 50.0% | |
TGTACCACCTGATCCATACG+CGG | + | chr1_3:9504189-9504208 | None:intergenic | 50.0% | |
CCTCTTGAGTCCACCATGTA+AGG | + | chr1_3:9504215-9504234 | None:intergenic | 50.0% | |
!! | CCTTACATGGTGGACTCAAG+AGG | - | chr1_3:9504212-9504231 | Msa0102650:CDS | 50.0% |
CTCCGGTAGTACCTCAAGTT+GGG | - | chr1_3:9504237-9504256 | Msa0102650:CDS | 50.0% | |
! | TCCGGTAGTACCTCAAGTTG+GGG | - | chr1_3:9504238-9504257 | Msa0102650:CDS | 50.0% |
AGATCAAAGTTGGGACGGGA+AGG | + | chr1_3:9504353-9504372 | None:intergenic | 50.0% | |
! | CGGGTTTCATGATTGATGGC+GGG | - | chr1_3:9504378-9504397 | Msa0102650:CDS | 50.0% |
!!! | GCAAGGCCGTTTTTCTTTCC+TGG | - | chr1_3:9504419-9504438 | Msa0102650:CDS | 50.0% |
TCCTGGTCAGAACAGAGCTA+TGG | - | chr1_3:9504436-9504455 | Msa0102650:CDS | 50.0% | |
! | TCCATAGCTCTGTTCTGACC+AGG | + | chr1_3:9504440-9504459 | None:intergenic | 50.0% |
CAATCCTCAAGTTCAGGGGT+TGG | - | chr1_3:9504476-9504495 | Msa0102650:CDS | 50.0% | |
!! | AAGAACCAGATGGTAGCGGT+TGG | - | chr1_3:9504510-9504529 | Msa0102650:CDS | 50.0% |
!! | AGAACCAGATGGTAGCGGTT+GGG | - | chr1_3:9504511-9504530 | Msa0102650:CDS | 50.0% |
AACATCAGCAACAACCTCCG+TGG | - | chr1_3:9504555-9504574 | Msa0102650:CDS | 50.0% | |
CAACTCCTGCACTCGAGAAG+GGG | + | chr1_3:9501576-9501595 | None:intergenic | 55.0% | |
CCAACTCCTGCACTCGAGAA+GGG | + | chr1_3:9501577-9501596 | None:intergenic | 55.0% | |
ACCAACTCCTGCACTCGAGA+AGG | + | chr1_3:9501578-9501597 | None:intergenic | 55.0% | |
CCCCGTTCACTGAAGACAAC+TGG | + | chr1_3:9502051-9502070 | None:intergenic | 55.0% | |
CACGGCGACGATACCTCAAA+TGG | - | chr1_3:9502718-9502737 | Msa0102650:CDS | 55.0% | |
AGTCGCTCGACAAGTTGCTG+AGG | - | chr1_3:9503005-9503024 | Msa0102650:CDS | 55.0% | |
TCTGGATGACACCTCGGGTA+GGG | + | chr1_3:9503139-9503158 | None:intergenic | 55.0% | |
GCCAGAATGCATCCCTGACT+TGG | - | chr1_3:9503227-9503246 | Msa0102650:CDS | 55.0% | |
GAAGCAGCTCAAGATCCAGG+AGG | - | chr1_3:9503267-9503286 | Msa0102650:CDS | 55.0% | |
GGCAATCCTGAAGTCTGTGC+AGG | + | chr1_3:9503411-9503430 | None:intergenic | 55.0% | |
! | TGATGCAGGACGAAAGGCAC+TGG | + | chr1_3:9503487-9503506 | None:intergenic | 55.0% |
ACGAGGTGATGCAGGACGAA+AGG | + | chr1_3:9503493-9503512 | None:intergenic | 55.0% | |
GCCTTCTGGGCAATCATCAG+TGG | - | chr1_3:9503656-9503675 | Msa0102650:CDS | 55.0% | |
CCGTCCTCTGATCTGAAGGT+TGG | + | chr1_3:9503749-9503768 | None:intergenic | 55.0% | |
ACCTTCAGATCAGAGGACGG+AGG | - | chr1_3:9503749-9503768 | Msa0102650:CDS | 55.0% | |
CCTTCAGATCAGAGGACGGA+GGG | - | chr1_3:9503750-9503769 | Msa0102650:CDS | 55.0% | |
CTTCAGATCAGAGGACGGAG+GGG | - | chr1_3:9503751-9503770 | Msa0102650:CDS | 55.0% | |
!! | ATCGATTTTGGGGGCCAAGG+TGG | - | chr1_3:9503968-9503987 | Msa0102650:CDS | 55.0% |
TTGGGGGCCAAGGTGGAAAT+CGG | - | chr1_3:9503975-9503994 | Msa0102650:CDS | 55.0% | |
GGCTCAACAGCCTTGCCATT+TGG | + | chr1_3:9504035-9504054 | None:intergenic | 55.0% | |
ACAATGATGCCAGGAGCTGG+TGG | - | chr1_3:9504068-9504087 | Msa0102650:CDS | 55.0% | |
GCGGCTGGCGAAAAAGACAA+AGG | + | chr1_3:9504170-9504189 | None:intergenic | 55.0% | |
!! | TCTTTTTCGCCAGCCGCGTA+TGG | - | chr1_3:9504173-9504192 | Msa0102650:CDS | 55.0% |
GCTCCGGTAGTACCTCAAGT+TGG | - | chr1_3:9504236-9504255 | Msa0102650:CDS | 55.0% | |
! | CCCCCAACTTGAGGTACTAC+CGG | + | chr1_3:9504242-9504261 | None:intergenic | 55.0% |
!! | CCGGTAGTACCTCAAGTTGG+GGG | - | chr1_3:9504239-9504258 | Msa0102650:CDS | 55.0% |
GAGGAAGATCCCCCAACTTG+AGG | + | chr1_3:9504251-9504270 | None:intergenic | 55.0% | |
GGGGCTGAGCGTAAGATGAT+AGG | + | chr1_3:9504280-9504299 | None:intergenic | 55.0% | |
AGCATGGCTGGTACACAGCT+TGG | - | chr1_3:9504311-9504330 | Msa0102650:CDS | 55.0% | |
TCCTCAAGTTCAGGGGTTGG+TGG | - | chr1_3:9504479-9504498 | Msa0102650:CDS | 55.0% | |
GTTTCCCAACCGCTACCATC+TGG | + | chr1_3:9504518-9504537 | None:intergenic | 55.0% | |
CACAACCCCTTCTCGAGTGC+AGG | - | chr1_3:9501568-9501587 | Msa0102650:CDS | 60.0% | |
CCCTTCTCGAGTGCAGGAGT+TGG | - | chr1_3:9501574-9501593 | Msa0102650:CDS | 60.0% | |
GGCACTATTGGTGCAGGCAC+AGG | + | chr1_3:9502505-9502524 | None:intergenic | 60.0% | |
GAAGGTGGAACGAGGCAAGC+TGG | - | chr1_3:9503072-9503091 | Msa0102650:CDS | 60.0% | |
GTCTGGATGACACCTCGGGT+AGG | + | chr1_3:9503140-9503159 | None:intergenic | 60.0% | |
CTCCGCTGAAGCATGTCCTG+AGG | - | chr1_3:9503167-9503186 | Msa0102650:CDS | 60.0% | |
!! | ACGAAAGGCACTGGTGGCAG+CGG | + | chr1_3:9503478-9503497 | None:intergenic | 60.0% |
!! | TGCAGGACGAAAGGCACTGG+TGG | + | chr1_3:9503484-9503503 | None:intergenic | 60.0% |
GGCTGGGGGTGAAGATGAAC+TGG | - | chr1_3:9503605-9503624 | Msa0102650:CDS | 60.0% | |
CCCTCCGTCCTCTGATCTGA+AGG | + | chr1_3:9503753-9503772 | None:intergenic | 60.0% | |
ACGGAGGGGCAGCTCTTCTT+TGG | - | chr1_3:9503765-9503784 | Msa0102650:CDS | 60.0% | |
! | CAGGAGCTGGTGGCGTTTCA+GGG | - | chr1_3:9504078-9504097 | Msa0102650:CDS | 60.0% |
! | AGCTGGTGGCGTTTCAGGGA+TGG | - | chr1_3:9504082-9504101 | Msa0102650:CDS | 60.0% |
! | GCTGGTGGCGTTTCAGGGAT+GGG | - | chr1_3:9504083-9504102 | Msa0102650:CDS | 60.0% |
! | GGTGGACTCAAGAGGAGCTC+CGG | - | chr1_3:9504220-9504239 | Msa0102650:CDS | 60.0% |
GCCACCAACCCCTGAACTTG+AGG | + | chr1_3:9504483-9504502 | None:intergenic | 60.0% | |
! | GGTGGATGGTGCCAGAGCCA+CGG | - | chr1_3:9502630-9502649 | Msa0102650:CDS | 65.0% |
AACGAGGCAAGCTGGCAGCG+CGG | - | chr1_3:9503080-9503099 | Msa0102650:CDS | 65.0% | |
GCTGGCAGCGCGGAATCTGT+TGG | - | chr1_3:9503090-9503109 | Msa0102650:CDS | 65.0% | |
CCTCGGGTAGGGCACATGCA+AGG | + | chr1_3:9503128-9503147 | None:intergenic | 65.0% | |
CCTTGCATGTGCCCTACCCG+AGG | - | chr1_3:9503125-9503144 | Msa0102650:CDS | 65.0% | |
CCTGAAACGCCACCAGCTCC+TGG | + | chr1_3:9504080-9504099 | None:intergenic | 65.0% | |
! | CCAGGAGCTGGTGGCGTTTC+AGG | - | chr1_3:9504077-9504096 | Msa0102650:CDS | 65.0% |
CGTTTCAGGGATGGGCCCTG+CGG | - | chr1_3:9504091-9504110 | Msa0102650:CDS | 65.0% | |
TCGCCAGCCGCGTATGGATC+AGG | - | chr1_3:9504179-9504198 | Msa0102650:CDS | 65.0% | |
CCACCTGATCCATACGCGGC+TGG | + | chr1_3:9504185-9504204 | None:intergenic | 65.0% | |
CCAGCCGCGTATGGATCAGG+TGG | - | chr1_3:9504182-9504201 | Msa0102650:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 9501521 | 9504583 | 9501521 | ID=Msa0102650;Name=Msa0102650 |
chr1_3 | mRNA | 9501521 | 9504583 | 9501521 | ID=Msa0102650-mRNA-1;Parent=Msa0102650;Name=Msa0102650-mRNA-1;_AED=0.11;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1020 |
chr1_3 | exon | 9501521 | 9504583 | 9501521 | ID=Msa0102650-mRNA-1:exon:3898;Parent=Msa0102650-mRNA-1 |
chr1_3 | CDS | 9501521 | 9504583 | 9501521 | ID=Msa0102650-mRNA-1:cds;Parent=Msa0102650-mRNA-1 |
Gene Sequence |
Protein sequence |