Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106970 | A0A396JJ07 | 49.425 | 174 | 65 | 5 | 102 | 257 | 157 | 325 | 8.73e-36 | 149 |
| Msa0106970 | A0A396JJ07 | 56.190 | 105 | 43 | 2 | 2 | 105 | 227 | 329 | 1.11e-21 | 108 |
| Msa0106970 | A0A396JJ07 | 58.793 | 381 | 59 | 5 | 333 | 615 | 12 | 392 | 1.62e-125 | 387 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0106970 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106970 | MtrunA17_Chr1g0163251 | 58.793 | 381 | 59 | 5 | 333 | 615 | 12 | 392 | 3.12e-129 | 387 |
| Msa0106970 | MtrunA17_Chr1g0163251 | 49.425 | 174 | 65 | 5 | 102 | 257 | 157 | 325 | 1.68e-39 | 149 |
| Msa0106970 | MtrunA17_Chr1g0163251 | 56.190 | 105 | 43 | 2 | 2 | 105 | 227 | 329 | 2.13e-25 | 108 |
| Msa0106970 | MtrunA17_Chr1g0163181 | 47.482 | 278 | 108 | 6 | 95 | 342 | 168 | 437 | 1.91e-68 | 230 |
| Msa0106970 | MtrunA17_Chr1g0163181 | 33.230 | 322 | 104 | 6 | 333 | 544 | 12 | 332 | 8.64e-43 | 160 |
| Msa0106970 | MtrunA17_Chr1g0163181 | 41.935 | 93 | 52 | 1 | 2 | 94 | 240 | 330 | 7.79e-13 | 71.2 |
| Msa0106970 | MtrunA17_Chr1g0163201 | 50.584 | 257 | 93 | 6 | 107 | 346 | 165 | 404 | 1.95e-67 | 226 |
| Msa0106970 | MtrunA17_Chr1g0163201 | 32.927 | 328 | 102 | 8 | 335 | 554 | 14 | 331 | 2.30e-36 | 141 |
| Msa0106970 | MtrunA17_Chr1g0163111 | 48.207 | 251 | 88 | 7 | 107 | 336 | 1 | 230 | 3.19e-65 | 214 |
| Msa0106970 | MtrunA17_Chr1g0163111 | 34.746 | 118 | 68 | 1 | 438 | 555 | 45 | 153 | 3.44e-16 | 78.6 |
| Msa0106970 | MtrunA17_Chr1g0163111 | 43.617 | 94 | 48 | 2 | 2 | 91 | 58 | 150 | 4.36e-12 | 66.2 |
| Msa0106970 | MtrunA17_Chr1g0163151 | 49.796 | 245 | 84 | 7 | 107 | 335 | 1 | 222 | 9.81e-63 | 207 |
| Msa0106970 | MtrunA17_Chr1g0163151 | 46.753 | 77 | 41 | 0 | 438 | 514 | 48 | 124 | 5.88e-17 | 80.5 |
| Msa0106970 | MtrunA17_Chr1g0163151 | 52.308 | 65 | 31 | 0 | 1 | 65 | 60 | 124 | 9.29e-13 | 68.2 |
| Msa0106970 | MtrunA17_Chr6g0476171 | 37.597 | 258 | 121 | 10 | 101 | 334 | 4 | 245 | 4.84e-37 | 139 |
| Msa0106970 | MtrunA17_Chr6g0476171 | 47.059 | 85 | 44 | 1 | 432 | 515 | 62 | 146 | 9.40e-17 | 80.5 |
| Msa0106970 | MtrunA17_Chr6g0476171 | 45.161 | 62 | 34 | 0 | 5 | 66 | 85 | 146 | 1.25e-11 | 65.5 |
| Msa0106970 | MtrunA17_Chr1g0162151 | 40.909 | 242 | 92 | 8 | 107 | 333 | 1 | 206 | 2.57e-36 | 135 |
| Msa0106970 | MtrunA17_Chr1g0162151 | 48.148 | 81 | 42 | 0 | 437 | 517 | 52 | 132 | 1.49e-20 | 90.9 |
| Msa0106970 | MtrunA17_Chr1g0162151 | 50.725 | 69 | 32 | 1 | 2 | 70 | 66 | 132 | 3.31e-14 | 72.4 |
| Msa0106970 | MtrunA17_Chr1g0163231 | 33.852 | 257 | 78 | 5 | 341 | 505 | 24 | 280 | 1.24e-32 | 127 |
| Msa0106970 | MtrunA17_Chr1g0163231 | 47.244 | 127 | 44 | 6 | 106 | 213 | 159 | 281 | 1.55e-21 | 95.5 |
| Msa0106970 | MtrunA17_Chr1g0163231 | 64.407 | 59 | 19 | 2 | 1 | 57 | 223 | 281 | 2.39e-15 | 77.4 |
| Msa0106970 | MtrunA17_Chr1g0163091 | 49.630 | 135 | 50 | 3 | 107 | 226 | 1 | 132 | 3.42e-30 | 116 |
| Msa0106970 | MtrunA17_Chr1g0163091 | 48.148 | 81 | 42 | 0 | 437 | 517 | 52 | 132 | 1.52e-19 | 86.3 |
| Msa0106970 | MtrunA17_Chr1g0163091 | 50.746 | 67 | 33 | 0 | 4 | 70 | 68 | 134 | 3.82e-13 | 67.8 |
| Msa0106970 | MtrunA17_Chr1g0163241 | 47.712 | 153 | 37 | 4 | 330 | 440 | 11 | 162 | 2.29e-29 | 114 |
| Msa0106970 | MtrunA17_Chr1g0163261 | 43.353 | 173 | 76 | 5 | 74 | 225 | 126 | 297 | 3.48e-28 | 115 |
| Msa0106970 | MtrunA17_Chr1g0163261 | 54.430 | 79 | 36 | 0 | 437 | 515 | 216 | 294 | 9.80e-22 | 96.3 |
| Msa0106970 | MtrunA17_Chr1g0163261 | 57.971 | 69 | 29 | 0 | 1 | 69 | 229 | 297 | 6.19e-19 | 88.2 |
| Msa0106970 | MtrunA17_Chr1g0171611 | 33.061 | 245 | 84 | 5 | 341 | 505 | 24 | 268 | 6.51e-28 | 114 |
| Msa0106970 | MtrunA17_Chr1g0171611 | 42.478 | 113 | 45 | 5 | 120 | 213 | 158 | 269 | 7.33e-17 | 81.6 |
| Msa0106970 | MtrunA17_Chr1g0171611 | 62.712 | 59 | 20 | 1 | 1 | 57 | 211 | 269 | 9.57e-16 | 78.6 |
| Msa0106970 | MtrunA17_Chr1g0163191 | 40.816 | 147 | 36 | 2 | 333 | 428 | 12 | 158 | 1.89e-20 | 89.0 |
| Msa0106970 | MtrunA17_Chr1g0163131 | 41.844 | 141 | 49 | 5 | 225 | 336 | 172 | 308 | 2.12e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 609 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAATATGTGGAGAAATTT+TGG | 0.128665 | 1_3:-16863056 | Msa0106970:CDS |
| TATTTCAAGGTTAAGATATT+TGG | 0.184615 | 1_3:-16862868 | Msa0106970:intron |
| TCCAAAAGTGCATGCTCTTC+AGG | 0.202285 | 1_3:-16861325 | Msa0106970:CDS |
| AAACTCTCTGGAGTTGAAAA+TGG | 0.208119 | 1_3:-16865831 | Msa0106970:CDS |
| CCATGGGAAGCATGCTCTTT+TGG | 0.213895 | 1_3:+16860937 | None:intergenic |
| CCATGAAGAGCTTGCACTTT+TGG | 0.219962 | 1_3:+16861133 | None:intergenic |
| CCCTGAAGAGCATGCACTTT+TGG | 0.229018 | 1_3:+16861324 | None:intergenic |
| TCAAAGAGAGAAGAATTTAA+AGG | 0.254601 | 1_3:-16867023 | Msa0106970:CDS |
| GCATGCACCAAAGAGATTTA+TGG | 0.255225 | 1_3:-16859428 | Msa0106970:CDS |
| CCAAAGAGAAAAGGATTTAA+AGG | 0.262203 | 1_3:-16868719 | Msa0106970:CDS |
| GCACACTTGAACAAATTTAA+AGG | 0.264956 | 1_3:-16867431 | Msa0106970:CDS |
| TTTGGTAAGTTAAGGAATAT+TGG | 0.266731 | 1_3:+16863018 | None:intergenic |
| GAGCTTGATTGCTCCCTTGA+TGG | 0.268197 | 1_3:+16868903 | None:intergenic |
| ATCCCAATTACCAGGTTATA+AGG | 0.281923 | 1_3:-16867072 | Msa0106970:intron |
| CCTCTTTCCATAAATCTCTT+TGG | 0.284821 | 1_3:+16859421 | None:intergenic |
| ACGATAGTATTCATGGTTAT+AGG | 0.290213 | 1_3:-16865775 | Msa0106970:CDS |
| AAATTTCTCCACATATTTCT+TGG | 0.293817 | 1_3:+16863059 | None:intergenic |
| AAGGATTTAAAGGAACTTCT+AGG | 0.297993 | 1_3:-16868709 | Msa0106970:CDS |
| AAGCTTGGTTGCTCCCTTGA+TGG | 0.305403 | 1_3:+16867218 | None:intergenic |
| TCTTCTAATTCTATGACTAT+TGG | 0.312742 | 1_3:-16861861 | Msa0106970:CDS |
| TTGGTAAGTTAAGGAATATT+GGG | 0.313398 | 1_3:+16863019 | None:intergenic |
| AAGAATTTAAAGGAACTTCT+AGG | 0.316735 | 1_3:-16867013 | Msa0106970:CDS |
| CTTAGGGTTTGGTCCCTTGT+TGG | 0.340353 | 1_3:+16861734 | None:intergenic |
| GAACACCATTTGGTAAGTTA+AGG | 0.345947 | 1_3:+16863010 | None:intergenic |
| CCTTGCAACTTCTTAGGGTT+TGG | 0.347894 | 1_3:+16861723 | None:intergenic |
| CCAAAAGTGCAAGCTCTTCA+TGG | 0.352478 | 1_3:-16861133 | Msa0106970:intron |
| AATTATTACGATAGTATTCA+TGG | 0.354510 | 1_3:-16865782 | Msa0106970:CDS |
| GTGTTTGATGTTTCAATTGT+TGG | 0.364550 | 1_3:-16865662 | Msa0106970:CDS |
| CACACTTGAACAAATTTAAA+GGG | 0.370401 | 1_3:-16867430 | Msa0106970:CDS |
| TATAAAGAAGGGATCTCTTC+TGG | 0.374152 | 1_3:-16861595 | Msa0106970:CDS |
| TATAAAGAAGGGATCTCTTA+TGG | 0.386855 | 1_3:-16861208 | Msa0106970:CDS |
| AATTTCTCCACATATTTCTT+GGG | 0.391202 | 1_3:+16863060 | None:intergenic |
| GAAGCTCAAATGATAACAAA+TGG | 0.392358 | 1_3:-16862730 | Msa0106970:CDS |
| AACTCTCTGGAGTTGAAAAT+GGG | 0.410653 | 1_3:-16865830 | Msa0106970:CDS |
| CTCTCATTAACAACTTCAAC+TGG | 0.412647 | 1_3:+16867668 | None:intergenic |
| CCAAAAGTGCATGCTCTTCA+GGG | 0.432133 | 1_3:-16861324 | Msa0106970:intron |
| GGGATTGCAAATTTAAGAGT+TGG | 0.438060 | 1_3:-16867410 | Msa0106970:CDS |
| CCAAAGGAGTTTATGAAAAG+AGG | 0.438669 | 1_3:-16865863 | Msa0106970:CDS |
| AGTTGGTGAGGACAAGACTA+TGG | 0.440819 | 1_3:-16867393 | Msa0106970:CDS |
| ATACTTTCAAGATGATTTGT+TGG | 0.445012 | 1_3:+16866984 | None:intergenic |
| AAAGAATGCAAAGTGGAGAT+TGG | 0.446068 | 1_3:-16865725 | Msa0106970:CDS |
| AGTCACAAGAGATCTTCTAT+TGG | 0.450938 | 1_3:+16867346 | None:intergenic |
| AGGAAGTCATGAAAACTCTC+TGG | 0.451275 | 1_3:-16865843 | Msa0106970:CDS |
| CTTTCAAGAAGATGATTTGT+TGG | 0.452264 | 1_3:+16868680 | None:intergenic |
| TACTTTCAAGATGATTTGTT+GGG | 0.461255 | 1_3:+16866985 | None:intergenic |
| GTTATAGGTTCTCTGAAGGT+TGG | 0.464034 | 1_3:-16865760 | Msa0106970:CDS |
| GATATTAATTTCTTTAAGCT+TGG | 0.469147 | 1_3:+16867203 | None:intergenic |
| CCATGACAAGGTTATAAAGA+AGG | 0.469658 | 1_3:-16861220 | Msa0106970:intron |
| TTTCAAGAAGATGATTTGTT+GGG | 0.470648 | 1_3:+16868681 | None:intergenic |
| CAGACACTGGAGAAACTTGT+AGG | 0.474334 | 1_3:-16861549 | Msa0106970:CDS |
| CCGTTACTATTACTCCATCA+AGG | 0.479147 | 1_3:-16868917 | Msa0106970:CDS |
| ATATTCCTTAACTTACCAAA+TGG | 0.484275 | 1_3:-16863015 | Msa0106970:CDS |
| CCATGACAAGGTTATAAAGA+AGG | 0.491612 | 1_3:-16861024 | Msa0106970:intron |
| CCATGACAAGGTTATAAAGA+AGG | 0.491612 | 1_3:-16861607 | Msa0106970:intron |
| AAGACACTCGAGAAACTTGT+AGG | 0.496208 | 1_3:-16861353 | Msa0106970:CDS |
| GTTATCATTTGAGCTTCCAT+TGG | 0.498272 | 1_3:+16862736 | None:intergenic |
| CCGTTACTATTACTCCATCA+AGG | 0.499776 | 1_3:-16867232 | Msa0106970:CDS |
| AACAATAGAACAAACAGCTA+AGG | 0.501698 | 1_3:+16865631 | None:intergenic |
| ACTATATCCACTTTCATAGC+AGG | 0.506832 | 1_3:+16861900 | None:intergenic |
| GGTGATAATCCAAAGAGAAA+AGG | 0.509436 | 1_3:-16868728 | Msa0106970:CDS |
| GGGATTGCAAACTTAAGAGT+TGG | 0.509708 | 1_3:-16869095 | None:intergenic |
| CCAAAGAGATTTATGGAAAG+AGG | 0.511759 | 1_3:-16859421 | Msa0106970:CDS |
| AAGACATTGGAGAAACTTGT+AGG | 0.516345 | 1_3:-16860966 | Msa0106970:CDS |
| AAGACGATGGAGAAACTTGT+AGG | 0.516472 | 1_3:-16861162 | Msa0106970:CDS |
| CAATTACCAGGTTATAAAGA+AGG | 0.517705 | 1_3:-16868764 | Msa0106970:intron |
| TGCAAATTTAAGAGTTGGTG+AGG | 0.518069 | 1_3:-16867405 | Msa0106970:CDS |
| ATAGTAATAGTGAATAAAAG+TGG | 0.519587 | 1_3:+16861765 | None:intergenic |
| CTAATTCTATGACTATTGGT+TGG | 0.519860 | 1_3:-16861857 | Msa0106970:CDS |
| AAGCTCAAATGATAACAAAT+GGG | 0.523055 | 1_3:-16862729 | Msa0106970:CDS |
| GGGATTGCAAGCTTAAGAGT+TGG | 0.529065 | 1_3:-16861930 | Msa0106970:CDS |
| ACAATAGAACAAACAGCTAA+GGG | 0.530051 | 1_3:+16865632 | None:intergenic |
| TGAATTATCACCACAAGAAG+AGG | 0.531434 | 1_3:+16867043 | None:intergenic |
| ATGATCATGATATTCTAAAG+AGG | 0.534079 | 1_3:-16860990 | Msa0106970:CDS |
| CATGACAAGGTTATAAAGAA+GGG | 0.535216 | 1_3:-16861219 | Msa0106970:intron |
| TTACCAACATATTGCTGCCA+TGG | 0.540173 | 1_3:+16867594 | None:intergenic |
| CATGGTTATAGGTTCTCTGA+AGG | 0.540492 | 1_3:-16865764 | Msa0106970:CDS |
| ATTCTAAAGAGGACAGACAC+TGG | 0.547208 | 1_3:-16861562 | Msa0106970:CDS |
| ATTCTAAAGAGGAAAGACAT+TGG | 0.551775 | 1_3:-16860979 | Msa0106970:CDS |
| TCAAAGAAATTAAAATCGCA+AGG | 0.552843 | 1_3:-16868882 | Msa0106970:intron |
| CATGACAAGGTTATAAAGAA+GGG | 0.554767 | 1_3:-16861023 | Msa0106970:intron |
| CATGACAAGGTTATAAAGAA+GGG | 0.554767 | 1_3:-16861606 | Msa0106970:intron |
| TGGATTATCACCACAAGAAG+AGG | 0.557132 | 1_3:+16868739 | None:intergenic |
| GTGATCATGATATTCTAAAG+AGG | 0.560187 | 1_3:-16861186 | Msa0106970:CDS |
| GTGATCGTGATATTCTAAAG+TGG | 0.561806 | 1_3:-16861377 | Msa0106970:CDS |
| CGTTACTATTACTCCATCAA+GGG | 0.562402 | 1_3:-16868916 | Msa0106970:CDS |
| CAATTACCAGGTTATAAGGA+AGG | 0.565649 | 1_3:-16867068 | Msa0106970:intron |
| ATAGTAACGGTAAATGAAAG+TGG | 0.569169 | 1_3:+16868930 | None:intergenic |
| TTAAAGAAATTAATATCGCA+AGG | 0.569842 | 1_3:-16867197 | Msa0106970:intron |
| CAGTGGAGGCATGATTAAGA+AGG | 0.573799 | 1_3:-16867705 | Msa0106970:CDS |
| ATAGTAACGGTGAATGAAAG+TGG | 0.574816 | 1_3:+16867245 | None:intergenic |
| TTGTCAAAATCTTACGTCCA+TGG | 0.576626 | 1_3:-16867611 | Msa0106970:CDS |
| TACTTTGCAGGTAGGGACAG+TGG | 0.579327 | 1_3:-16867722 | Msa0106970:intron |
| CGTCCATGGCAGCAATATGT+TGG | 0.579724 | 1_3:-16867597 | Msa0106970:intron |
| AATTACCAGGTTATAAAGAA+GGG | 0.583013 | 1_3:-16868763 | Msa0106970:intron |
| TGCAAGCTTAAGAGTTGGAG+AGG | 0.584782 | 1_3:-16861925 | Msa0106970:CDS |
| CCAAAAGAGCATGCTTCCCA+TGG | 0.586590 | 1_3:-16860937 | Msa0106970:intron |
| AGAGGACCCTGCTATGAAAG+TGG | 0.587637 | 1_3:-16861907 | Msa0106970:CDS |
| CCAAACCCTAAGAAGTTGCA+AGG | 0.590895 | 1_3:-16861723 | Msa0106970:intron |
| GTGATCGTGATATTCTAAAG+AGG | 0.591830 | 1_3:-16861573 | Msa0106970:CDS |
| GAGGATTCCCAAGAAATATG+TGG | 0.594786 | 1_3:-16863067 | Msa0106970:CDS |
| TACTATCACTAAATCCAACA+AGG | 0.595283 | 1_3:-16861748 | Msa0106970:CDS |
| ATATTTGCAGAATGTTCCAA+AGG | 0.598638 | 1_3:-16865879 | Msa0106970:intron |
| CTCTCTGGAGTTGAAAATGG+GGG | 0.599653 | 1_3:-16865828 | Msa0106970:CDS |
| CGTTACTATTACTCCATCAA+GGG | 0.606445 | 1_3:-16867231 | Msa0106970:CDS |
| ATTCATAAAAGAATGCAAAG+TGG | 0.613826 | 1_3:-16865732 | Msa0106970:CDS |
| TGAAGACATGACTATGAAAG+TGG | 0.619803 | 1_3:-16869072 | Msa0106970:exon |
| AATTACCAGGTTATAAGGAA+GGG | 0.622190 | 1_3:-16867067 | Msa0106970:intron |
| CTATATCCACTTTCATAGCA+GGG | 0.623870 | 1_3:+16861901 | None:intergenic |
| TGATGAGAGTGAAATACCAA+TGG | 0.626564 | 1_3:-16862752 | Msa0106970:CDS |
| AAAGAAGGGACCTCTTCTTG+TGG | 0.632268 | 1_3:-16868749 | Msa0106970:CDS |
| AAGGAAGGGACCTCTTCTTG+TGG | 0.640604 | 1_3:-16867053 | Msa0106970:CDS |
| ATTCTAAAGAGGAAAGACGA+TGG | 0.644377 | 1_3:-16861175 | Msa0106970:CDS |
| CCTTGATGGAGTAATAGTAA+CGG | 0.644881 | 1_3:+16868917 | None:intergenic |
| CCTTGATGGAGTAATAGTAA+CGG | 0.655922 | 1_3:+16867232 | None:intergenic |
| ACTCTCTGGAGTTGAAAATG+GGG | 0.658989 | 1_3:-16865829 | Msa0106970:CDS |
| ACTATCACTAAATCCAACAA+GGG | 0.658996 | 1_3:-16861747 | Msa0106970:CDS |
| CAATAGAACAAACAGCTAAG+GGG | 0.667474 | 1_3:+16865633 | None:intergenic |
| TCTCTGGAGTTGAAAATGGG+GGG | 0.680996 | 1_3:-16865827 | Msa0106970:CDS |
| TTTGCAGGTAGGGACAGTGG+AGG | 0.713017 | 1_3:-16867719 | Msa0106970:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAAAAAAAAAAAAA+AGG | + | chr1_3:16860051-16860070 | None:intergenic | 0.0% |
| !! | ACTAATATTTAATCAATTAT+TGG | + | chr1_3:16859899-16859918 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAATAAACCAAA+AGG | - | chr1_3:16860056-16860075 | Msa0106970:intron | 10.0% |
| !!! | TTTTTTTAAATAAACCAAAA+GGG | - | chr1_3:16860057-16860076 | Msa0106970:intron | 10.0% |
| !!! | ATCATTTTATATTTATTTTG+GGG | + | chr1_3:16860105-16860124 | None:intergenic | 10.0% |
| !!! | CTATCATTTTATATTTATTT+TGG | + | chr1_3:16860107-16860126 | None:intergenic | 10.0% |
| !! | ATATTTAAAAAATGACTAAT+AGG | + | chr1_3:16860167-16860186 | None:intergenic | 10.0% |
| !! | AAAATTAAATCATATTATCA+AGG | + | chr1_3:16860650-16860669 | None:intergenic | 10.0% |
| !!! | ATTTTAATTTCACAAAAAAA+TGG | - | chr1_3:16862383-16862402 | Msa0106970:intron | 10.0% |
| !! | ATATATATGTAACAAATATT+TGG | - | chr1_3:16862504-16862523 | Msa0106970:intron | 10.0% |
| !! | TTAATGTAATAAATACATTT+AGG | - | chr1_3:16863848-16863867 | Msa0106970:intron | 10.0% |
| !!! | TTAATTTTTAAATATATTGG+TGG | - | chr1_3:16865604-16865623 | Msa0106970:intron | 10.0% |
| !!! | TAATAAAATTCATTTTTCAA+AGG | + | chr1_3:16865922-16865941 | None:intergenic | 10.0% |
| !! | CTAAATAAAGAAATTAATTA+AGG | + | chr1_3:16867038-16867057 | None:intergenic | 10.0% |
| !! | TTAACTAAATAAAGAAATTA+AGG | + | chr1_3:16867042-16867061 | None:intergenic | 10.0% |
| !!! | AATTAAAATTGTTATTAATC+TGG | - | chr1_3:16867669-16867688 | Msa0106970:CDS | 10.0% |
| !! | TAAAATTTCTTTCAAATTTA+TGG | + | chr1_3:16867824-16867843 | None:intergenic | 10.0% |
| !!! | CATTTTTTTAAATTGTTATT+TGG | - | chr1_3:16868147-16868166 | Msa0106970:intron | 10.0% |
| !!! | AGAAAAATCTATTTTTATAT+TGG | - | chr1_3:16868428-16868447 | Msa0106970:intron | 10.0% |
| !!! | GAAAAATCTATTTTTATATT+GGG | - | chr1_3:16868429-16868448 | Msa0106970:intron | 10.0% |
| !!! | GAATTATTAAATATTTTGTA+AGG | + | chr1_3:16868530-16868549 | None:intergenic | 10.0% |
| !! | ACAAAATATTTAATAATTCA+AGG | - | chr1_3:16868531-16868550 | Msa0106970:intron | 10.0% |
| !!! | AAATTTAGAGATTTTTAAAT+AGG | + | chr1_3:16868644-16868663 | None:intergenic | 10.0% |
| !!! | TAAAAATCTCTAAATTTTTT+TGG | - | chr1_3:16868647-16868666 | Msa0106970:intron | 10.0% |
| !!! | AAAAATCTCTAAATTTTTTT+GGG | - | chr1_3:16868648-16868667 | Msa0106970:intron | 10.0% |
| !!! | TATAATATCCTATTTTTATT+GGG | + | chr1_3:16868675-16868694 | None:intergenic | 10.0% |
| !!! | TTATAATATCCTATTTTTAT+TGG | + | chr1_3:16868676-16868695 | None:intergenic | 10.0% |
| !!! | AAAATCTCTAATTTTTTTTT+TGG | - | chr1_3:16868694-16868713 | Msa0106970:CDS | 10.0% |
| !!! | AAATCTCTAATTTTTTTTTT+GGG | - | chr1_3:16868695-16868714 | Msa0106970:CDS | 10.0% |
| !! | TATAAAAATATATAACCATT+TGG | - | chr1_3:16868767-16868786 | Msa0106970:intron | 10.0% |
| !!! | TATTAATGTTTTTTTTAAGA+CGG | + | chr1_3:16868864-16868883 | None:intergenic | 10.0% |
| !!! | AGCATTTTTAATAACAAAAA+AGG | + | chr1_3:16859648-16859667 | None:intergenic | 15.0% |
| !! | ATTTGATATTTGAATTTACT+AGG | - | chr1_3:16859671-16859690 | Msa0106970:intron | 15.0% |
| !! | AATCAATTATTGGTAAATTA+AGG | + | chr1_3:16859889-16859908 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAAAAAGGTTC+AGG | + | chr1_3:16860045-16860064 | None:intergenic | 15.0% |
| !! | TATAAAATGATAGAAACAAA+AGG | - | chr1_3:16860114-16860133 | Msa0106970:intron | 15.0% |
| !!! | CATTTTTTAAATATGATATG+CGG | - | chr1_3:16860173-16860192 | Msa0106970:intron | 15.0% |
| !!! | ATTATCAAGGTTTTAAATAA+CGG | + | chr1_3:16860637-16860656 | None:intergenic | 15.0% |
| !! | ATCAATTATTGATAAATTCA+GGG | + | chr1_3:16861579-16861598 | None:intergenic | 15.0% |
| !! | AATCAATTATTGATAAATTC+AGG | + | chr1_3:16861580-16861599 | None:intergenic | 15.0% |
| !! | ACATTATTTCAAAATCATTA+GGG | + | chr1_3:16861642-16861661 | None:intergenic | 15.0% |
| !! | TACATTATTTCAAAATCATT+AGG | + | chr1_3:16861643-16861662 | None:intergenic | 15.0% |
| !!! | AATTTGAAATAGGTTAAAAA+GGG | + | chr1_3:16861940-16861959 | None:intergenic | 15.0% |
| !!! | TAATTTGAAATAGGTTAAAA+AGG | + | chr1_3:16861941-16861960 | None:intergenic | 15.0% |
| !!! | ACTTATCAATAATTTGAAAT+AGG | + | chr1_3:16861950-16861969 | None:intergenic | 15.0% |
| !!! | AAAGATTTTTAAATATGTCT+TGG | + | chr1_3:16862001-16862020 | None:intergenic | 15.0% |
| !! | ACGATTAATTACATAAAATA+TGG | - | chr1_3:16862175-16862194 | Msa0106970:intron | 15.0% |
| !! | TGAAGAAAATATATATGTTA+GGG | + | chr1_3:16864134-16864153 | None:intergenic | 15.0% |
| !! | TTGAAGAAAATATATATGTT+AGG | + | chr1_3:16864135-16864154 | None:intergenic | 15.0% |
| !! | GTATAAAATTATATATGTTC+AGG | + | chr1_3:16864918-16864937 | None:intergenic | 15.0% |
| !!! | TCAATAGTATTAAAACATTT+TGG | - | chr1_3:16865119-16865138 | Msa0106970:intron | 15.0% |
| !! | AATTTAATTCTTTCTAATTG+GGG | + | chr1_3:16865339-16865358 | None:intergenic | 15.0% |
| !! | CAATTTAATTCTTTCTAATT+GGG | + | chr1_3:16865340-16865359 | None:intergenic | 15.0% |
| !! | ACAATTTAATTCTTTCTAAT+TGG | + | chr1_3:16865341-16865360 | None:intergenic | 15.0% |
| !!! | TGTTCAACAAAAAATATTTT+GGG | - | chr1_3:16865507-16865526 | Msa0106970:intron | 15.0% |
| !!! | ATATTTGGTTTCAAAAAAAT+TGG | - | chr1_3:16865545-16865564 | Msa0106970:intron | 15.0% |
| !!! | TATTTGGTTTCAAAAAAATT+GGG | - | chr1_3:16865546-16865565 | Msa0106970:intron | 15.0% |
| !! | ATTACTTGAAATTAAGTTAA+GGG | + | chr1_3:16866015-16866034 | None:intergenic | 15.0% |
| !! | TATTACTTGAAATTAAGTTA+AGG | + | chr1_3:16866016-16866035 | None:intergenic | 15.0% |
| !!! | TTCATGTTTTAATTTTCTTA+TGG | + | chr1_3:16866159-16866178 | None:intergenic | 15.0% |
| !!! | ATGAATTTTAAGTTTTTTGA+GGG | - | chr1_3:16866174-16866193 | Msa0106970:intron | 15.0% |
| !!! | CAACTTTTAAGTTATATTTT+TGG | + | chr1_3:16866679-16866698 | None:intergenic | 15.0% |
| !! | CAAAAATATAACTTAAAAGT+TGG | - | chr1_3:16866677-16866696 | Msa0106970:intron | 15.0% |
| !! | TAAATTATTGATAAGTTTAG+AGG | + | chr1_3:16867695-16867714 | None:intergenic | 15.0% |
| !!! | TTTAAGGATACATTTTTTTA+GGG | + | chr1_3:16867759-16867778 | None:intergenic | 15.0% |
| !!! | TTAAGGATACATTTTTTTTA+GGG | + | chr1_3:16867784-16867803 | None:intergenic | 15.0% |
| !!! | TTTAAGGATACATTTTTTTT+AGG | + | chr1_3:16867785-16867804 | None:intergenic | 15.0% |
| !!! | AAACATTTTCAAAGAAATTA+AGG | + | chr1_3:16868036-16868055 | None:intergenic | 15.0% |
| !! | CAAAATATTTAATAGTTCAA+GGG | - | chr1_3:16868086-16868105 | Msa0106970:intron | 15.0% |
| !! | TTTCTAATATATAAGTTTAG+AGG | + | chr1_3:16868413-16868432 | None:intergenic | 15.0% |
| !!! | CATATCAATAGTTTTTATAT+AGG | + | chr1_3:16868584-16868603 | None:intergenic | 15.0% |
| !!! | AAAGATTTAGAGATTTTTAA+AGG | + | chr1_3:16868723-16868742 | None:intergenic | 15.0% |
| !!! | CAACTTGTAAGTTATATTTT+TGG | + | chr1_3:16859514-16859533 | None:intergenic | 20.0% |
| !! | CAAAAATATAACTTACAAGT+TGG | - | chr1_3:16859512-16859531 | Msa0106970:intron | 20.0% |
| !!! | TTTTATATTTATTTTGGGGT+TGG | + | chr1_3:16860101-16860120 | None:intergenic | 20.0% |
| !! | ATTTAAACTAGAGAAAGATT+TGG | + | chr1_3:16860477-16860496 | None:intergenic | 20.0% |
| !! | GACAATGTAACATAAAAAAA+GGG | + | chr1_3:16860873-16860892 | None:intergenic | 20.0% |
| !! | TGACAATGTAACATAAAAAA+AGG | + | chr1_3:16860874-16860893 | None:intergenic | 20.0% |
| !! | ACAAATAATTAGAGATTAGT+GGG | + | chr1_3:16861002-16861021 | None:intergenic | 20.0% |
| !! | AACAAATAATTAGAGATTAG+TGG | + | chr1_3:16861003-16861022 | None:intergenic | 20.0% |
| !! | TAACCAAAAATATAACTTAC+AGG | - | chr1_3:16859508-16859527 | Msa0106970:intron | 20.0% |
| !! | GATATTAATTTCTTTAAGCT+TGG | + | chr1_3:16861299-16861318 | None:intergenic | 20.0% |
| !! | TTAAAGAAATTAATATCGCA+AGG | - | chr1_3:16861302-16861321 | Msa0106970:intron | 20.0% |
| !!! | GTTTTTTGTTCTTTCTTATT+TGG | - | chr1_3:16861324-16861343 | Msa0106970:intron | 20.0% |
| !! | TCAAATTATTGATAAGTTCA+AGG | - | chr1_3:16861953-16861972 | Msa0106970:intron | 20.0% |
| !!! | TTTTATGTAATTAATCGTAC+CGG | + | chr1_3:16862173-16862192 | None:intergenic | 20.0% |
| !! | ATGGTATTTATATTAGATCT+GGG | + | chr1_3:16862244-16862263 | None:intergenic | 20.0% |
| !! | TATGGTATTTATATTAGATC+TGG | + | chr1_3:16862245-16862264 | None:intergenic | 20.0% |
| !! | AAATATGAAGAAAAAAGAGA+TGG | + | chr1_3:16862354-16862373 | None:intergenic | 20.0% |
| !! | AATTATTACGATAGTATTCA+TGG | - | chr1_3:16862717-16862736 | Msa0106970:CDS | 20.0% |
| !! | ATCATATAGTAAAAATCCAA+AGG | + | chr1_3:16863035-16863054 | None:intergenic | 20.0% |
| !!! | ATTGTTTTGTAATGCTTTTT+CGG | - | chr1_3:16863053-16863072 | Msa0106970:CDS | 20.0% |
| !!! | AGTTAATTTGATTGTTAAAG+TGG | - | chr1_3:16863527-16863546 | Msa0106970:intron | 20.0% |
| !!! | TTGTTTTATAAACCTGTTTT+TGG | + | chr1_3:16864167-16864186 | None:intergenic | 20.0% |
| !! | GGTTTATAAAACAAATGAAA+TGG | - | chr1_3:16864173-16864192 | Msa0106970:intron | 20.0% |
| !! | AACTCTTTCAAATAGAAAAA+GGG | + | chr1_3:16864323-16864342 | None:intergenic | 20.0% |
| !! | TAACTCTTTCAAATAGAAAA+AGG | + | chr1_3:16864324-16864343 | None:intergenic | 20.0% |
| !!! | ACGTACAATTTTTTAACATT+AGG | - | chr1_3:16864397-16864416 | Msa0106970:intron | 20.0% |
| !!! | CGTACAATTTTTTAACATTA+GGG | - | chr1_3:16864398-16864417 | Msa0106970:intron | 20.0% |
| !!! | GTACAATTTTTTAACATTAG+GGG | - | chr1_3:16864399-16864418 | Msa0106970:intron | 20.0% |
| !!! | ATAATGAGAATTTTATTCCT+AGG | - | chr1_3:16864479-16864498 | Msa0106970:intron | 20.0% |
| !!! | AGTTTTCATTTTTTGAGTAA+TGG | + | chr1_3:16864584-16864603 | None:intergenic | 20.0% |
| !!! | ATTTTTATTCCCATGAAAAA+AGG | + | chr1_3:16864714-16864733 | None:intergenic | 20.0% |
| !! | GAAAAAATAATTCCTATGTT+TGG | + | chr1_3:16864807-16864826 | None:intergenic | 20.0% |
| !!! | TTAATACTATTGACTATTGA+TGG | + | chr1_3:16865112-16865131 | None:intergenic | 20.0% |
| !! | AATATTATCCTATGAAAATC+GGG | + | chr1_3:16865290-16865309 | None:intergenic | 20.0% |
| !! | CAATATTATCCTATGAAAAT+CGG | + | chr1_3:16865291-16865310 | None:intergenic | 20.0% |
| !!! | GTGTTCAACAAAAAATATTT+TGG | - | chr1_3:16865506-16865525 | Msa0106970:intron | 20.0% |
| !! | TATTTCAAGGTTAAGATATT+TGG | - | chr1_3:16865631-16865650 | Msa0106970:intron | 20.0% |
| !!! | TTCATCAACAGATTTTATAT+TGG | + | chr1_3:16865683-16865702 | None:intergenic | 20.0% |
| !!! | AGATTTGAAACAAAAAAGAA+GGG | + | chr1_3:16865875-16865894 | None:intergenic | 20.0% |
| !!! | CTTAATTTCAAGTAATAGTT+TGG | - | chr1_3:16866019-16866038 | Msa0106970:intron | 20.0% |
| !!! | TCATTTCAATTTTGTCTTTT+TGG | - | chr1_3:16866058-16866077 | Msa0106970:intron | 20.0% |
| !!! | CATGAATTTTAAGTTTTTTG+AGG | - | chr1_3:16866173-16866192 | Msa0106970:intron | 20.0% |
| !!! | AAACTCTGAAATTAAGTTAA+AGG | - | chr1_3:16866237-16866256 | Msa0106970:intron | 20.0% |
| !! | GTCATTAAAACTTCAAAAAA+GGG | + | chr1_3:16866389-16866408 | None:intergenic | 20.0% |
| !! | TGTCATTAAAACTTCAAAAA+AGG | + | chr1_3:16866390-16866409 | None:intergenic | 20.0% |
| !! | TCTAAAAATGTCTACTAATT+TGG | - | chr1_3:16866448-16866467 | Msa0106970:intron | 20.0% |
| !! | CACTAATCTATAATAAAATG+TGG | - | chr1_3:16866484-16866503 | Msa0106970:intron | 20.0% |
| !! | ATAGTAATAGTGAATAAAAG+TGG | + | chr1_3:16866737-16866756 | None:intergenic | 20.0% |
| !! | TTAAATCTTTCAGTTCAAAA+AGG | + | chr1_3:16867720-16867739 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTAGGGAATTTA+AGG | + | chr1_3:16867750-16867769 | None:intergenic | 20.0% |
| !!! | GTTTAAGGATACATTTTTTT+AGG | + | chr1_3:16867760-16867779 | None:intergenic | 20.0% |
| !! | TTGAACCTTACAAAATATTT+AGG | - | chr1_3:16867883-16867902 | Msa0106970:intron | 20.0% |
| !!! | GAATTCCTAAATATTTTGTA+AGG | + | chr1_3:16867891-16867910 | None:intergenic | 20.0% |
| !!! | CACATCAATAATTTGTATAT+AGG | + | chr1_3:16867939-16867958 | None:intergenic | 20.0% |
| !! | ACAAATTATTGATGTGTTTA+AGG | - | chr1_3:16867943-16867962 | Msa0106970:intron | 20.0% |
| !! | GCAAAATATTTAATAGTTCA+AGG | - | chr1_3:16868085-16868104 | Msa0106970:intron | 20.0% |
| !! | ATGAAAATAGTAATCTAAAG+AGG | - | chr1_3:16868234-16868253 | Msa0106970:intron | 20.0% |
| !!! | ACTTTTAAATAATTTGCGAA+TGG | - | chr1_3:16868503-16868522 | Msa0106970:intron | 20.0% |
| !!! | CTTTTAAATAATTTGCGAAT+GGG | - | chr1_3:16868504-16868523 | Msa0106970:intron | 20.0% |
| !!! | TCAGTAAATAAATTTTTCGT+TGG | - | chr1_3:16868556-16868575 | Msa0106970:intron | 20.0% |
| !! | AAAAACTATTGATATGCTTA+AGG | - | chr1_3:16868588-16868607 | Msa0106970:intron | 20.0% |
| !! | AAAACTATTGATATGCTTAA+GGG | - | chr1_3:16868589-16868608 | Msa0106970:intron | 20.0% |
| !! | AAAATATATAACCATTTGGT+TGG | - | chr1_3:16868771-16868790 | Msa0106970:intron | 20.0% |
| !! | AGGGTAAATTACATAAAATA+CGG | - | chr1_3:16868975-16868994 | Msa0106970:CDS | 20.0% |
| ! | TCAAAGAAATTAAAATCGCA+AGG | - | chr1_3:16859617-16859636 | Msa0106970:intron | 25.0% |
| ! | TTCTTTATAACCTGGTAATT+GGG | + | chr1_3:16859736-16859755 | None:intergenic | 25.0% |
| ! | AATTACCAGGTTATAAAGAA+GGG | - | chr1_3:16859736-16859755 | Msa0106970:intron | 25.0% |
| !!! | TTTCAAGAAGATGATTTGTT+GGG | + | chr1_3:16859821-16859840 | None:intergenic | 25.0% |
| !! | TTTTAAATAAACCAAAAGGG+TGG | - | chr1_3:16860060-16860079 | Msa0106970:intron | 25.0% |
| ! | AAAATGATAGAAACAAAAGG+AGG | - | chr1_3:16860117-16860136 | Msa0106970:intron | 25.0% |
| ! | AAATGATAGAAACAAAAGGA+GGG | - | chr1_3:16860118-16860137 | Msa0106970:intron | 25.0% |
| !!! | TGATATGCGGTTTTAAAAAA+CGG | - | chr1_3:16860186-16860205 | Msa0106970:intron | 25.0% |
| !!! | TTTTGTTTACTCCGTAAAAA+CGG | + | chr1_3:16860273-16860292 | None:intergenic | 25.0% |
| !!! | GATATTTTTTGCAATTGAGA+TGG | - | chr1_3:16860379-16860398 | Msa0106970:intron | 25.0% |
| !! | AATTAGTAGACCTTTTTAGA+TGG | + | chr1_3:16860936-16860955 | None:intergenic | 25.0% |
| !! | CTAAAAAGGTCTACTAATTT+TGG | - | chr1_3:16860937-16860956 | Msa0106970:intron | 25.0% |
| !!! | GATTAGTGGGATTTTATTTT+TGG | + | chr1_3:16860989-16861008 | None:intergenic | 25.0% |
| ! | CACACTTGAACAAATTTAAA+GGG | - | chr1_3:16861069-16861088 | Msa0106970:intron | 25.0% |
| !! | CAACCTGTAAGTTATATTTT+TGG | + | chr1_3:16861199-16861218 | None:intergenic | 25.0% |
| ! | CAAAAATATAACTTACAGGT+TGG | - | chr1_3:16861197-16861216 | Msa0106970:CDS | 25.0% |
| ! | TCAAAGAGAGAAGAATTTAA+AGG | - | chr1_3:16861476-16861495 | Msa0106970:intron | 25.0% |
| ! | AAGAATTTAAAGGAACTTCT+AGG | - | chr1_3:16861486-16861505 | Msa0106970:intron | 25.0% |
| !!! | TACTTTCAAGATGATTTGTT+GGG | + | chr1_3:16861517-16861536 | None:intergenic | 25.0% |
| !! | ATACTTTCAAGATGATTTGT+TGG | + | chr1_3:16861518-16861537 | None:intergenic | 25.0% |
| !! | ACATCAATCTTGAATGTTTT+AGG | + | chr1_3:16862137-16862156 | None:intergenic | 25.0% |
| ! | TTTATGTAATTAATCGTACC+GGG | + | chr1_3:16862172-16862191 | None:intergenic | 25.0% |
| ! | TGGTATTTATATTAGATCTG+GGG | + | chr1_3:16862243-16862262 | None:intergenic | 25.0% |
| ! | CTATATATTAACATAGTCAG+TGG | + | chr1_3:16862558-16862577 | None:intergenic | 25.0% |
| ! | ATTCATAAAAGAATGCAAAG+TGG | - | chr1_3:16862767-16862786 | Msa0106970:CDS | 25.0% |
| ! | GTTTGTTCTATTGTTCTTTA+AGG | - | chr1_3:16862876-16862895 | Msa0106970:intron | 25.0% |
| ! | AAGTGGTGAATTTAAATAGA+TGG | - | chr1_3:16863544-16863563 | Msa0106970:intron | 25.0% |
| ! | TATTCCTTTGTAAGATACAT+GGG | + | chr1_3:16863770-16863789 | None:intergenic | 25.0% |
| !! | TCTTTAGAAATGTTGACATT+TGG | + | chr1_3:16863900-16863919 | None:intergenic | 25.0% |
| ! | TAAACCATTATATAGTAGCA+AGG | - | chr1_3:16863992-16864011 | Msa0106970:intron | 25.0% |
| ! | ATGCTTAGAAATTATATGAG+GGG | + | chr1_3:16864086-16864105 | None:intergenic | 25.0% |
| ! | GATGCTTAGAAATTATATGA+GGG | + | chr1_3:16864087-16864106 | None:intergenic | 25.0% |
| ! | AGATGCTTAGAAATTATATG+AGG | + | chr1_3:16864088-16864107 | None:intergenic | 25.0% |
| ! | TTCTATTTGAAAGAGTTAAG+CGG | - | chr1_3:16864326-16864345 | Msa0106970:intron | 25.0% |
| !! | ATTCTCATTATGATTTTCCT+GGG | + | chr1_3:16864470-16864489 | None:intergenic | 25.0% |
| !! | AATTCTCATTATGATTTTCC+TGG | + | chr1_3:16864471-16864490 | None:intergenic | 25.0% |
| ! | ACTTACTTGAAAAAATTCCA+AGG | + | chr1_3:16864542-16864561 | None:intergenic | 25.0% |
| ! | TGAGTTAAATGATAATCTAG+GGG | + | chr1_3:16864878-16864897 | None:intergenic | 25.0% |
| ! | GTGAGTTAAATGATAATCTA+GGG | + | chr1_3:16864879-16864898 | None:intergenic | 25.0% |
| ! | AGTGAGTTAAATGATAATCT+AGG | + | chr1_3:16864880-16864899 | None:intergenic | 25.0% |
| ! | TAATTGAATGGGAAAATGTT+GGG | + | chr1_3:16865030-16865049 | None:intergenic | 25.0% |
| ! | ATAATTGAATGGGAAAATGT+TGG | + | chr1_3:16865031-16865050 | None:intergenic | 25.0% |
| !! | TGTAATGGAGATAATTGAAT+GGG | + | chr1_3:16865041-16865060 | None:intergenic | 25.0% |
| !! | TTGTAATGGAGATAATTGAA+TGG | + | chr1_3:16865042-16865061 | None:intergenic | 25.0% |
| ! | TCAATTATCTCCATTACAAT+TGG | - | chr1_3:16865043-16865062 | Msa0106970:intron | 25.0% |
| !! | AATATATTCCCGATTTTCAT+AGG | - | chr1_3:16865279-16865298 | Msa0106970:intron | 25.0% |
| ! | AATTTCTCCACATATTTCTT+GGG | + | chr1_3:16865442-16865461 | None:intergenic | 25.0% |
| ! | AAATTTCTCCACATATTTCT+TGG | + | chr1_3:16865443-16865462 | None:intergenic | 25.0% |
| !! | AGAAATATGTGGAGAAATTT+TGG | - | chr1_3:16865443-16865462 | Msa0106970:intron | 25.0% |
| ! | TTGGTAAGTTAAGGAATATT+GGG | + | chr1_3:16865483-16865502 | None:intergenic | 25.0% |
| ! | TTTGGTAAGTTAAGGAATAT+TGG | + | chr1_3:16865484-16865503 | None:intergenic | 25.0% |
| ! | ATATTCCTTAACTTACCAAA+TGG | - | chr1_3:16865484-16865503 | Msa0106970:intron | 25.0% |
| !!! | ATTTTTTGTTGAACACCATT+TGG | + | chr1_3:16865502-16865521 | None:intergenic | 25.0% |
| !!! | ATATTTTGGGTAGAGAATAA+TGG | - | chr1_3:16865520-16865539 | Msa0106970:intron | 25.0% |
| ! | TAGAGAATAATGGTGATATT+TGG | - | chr1_3:16865530-16865549 | Msa0106970:intron | 25.0% |
| ! | AAGCTCAAATGATAACAAAT+GGG | - | chr1_3:16865770-16865789 | Msa0106970:CDS | 25.0% |
| ! | CAAAAAAGAAGGGAAAAAAA+TGG | + | chr1_3:16865865-16865884 | None:intergenic | 25.0% |
| !! | CAGATTTGAAACAAAAAAGA+AGG | + | chr1_3:16865876-16865895 | None:intergenic | 25.0% |
| !!! | TAACAAATTAACTCTAAAGC+AGG | - | chr1_3:16866281-16866300 | Msa0106970:intron | 25.0% |
| ! | AAAAAAGGGATTCTCATTAT+TGG | + | chr1_3:16860859-16860878 | None:intergenic | 25.0% |
| ! | TCATACTTGAACAAATTTGA+AGG | - | chr1_3:16866548-16866567 | Msa0106970:intron | 25.0% |
| ! | CATACTTGAACAAATTTGAA+GGG | - | chr1_3:16866549-16866568 | Msa0106970:intron | 25.0% |
| ! | TCTTCTAATTCTATGACTAT+TGG | - | chr1_3:16866638-16866657 | Msa0106970:intron | 25.0% |
| !! | ATGATCATGATATTCTAAAG+AGG | - | chr1_3:16867509-16867528 | Msa0106970:intron | 25.0% |
| ! | AAGTTAGAAGATTATACCAT+GGG | + | chr1_3:16867581-16867600 | None:intergenic | 25.0% |
| ! | AAAGTTAGAAGATTATACCA+TGG | + | chr1_3:16867582-16867601 | None:intergenic | 25.0% |
| !!! | CATTTTTTTTAGGGAGTTTA+AGG | + | chr1_3:16867775-16867794 | None:intergenic | 25.0% |
| ! | CATAAATAATAACTGAACAC+TGG | + | chr1_3:16867913-16867932 | None:intergenic | 25.0% |
| ! | CAGTGTTCAGTTATTATTTA+TGG | - | chr1_3:16867911-16867930 | Msa0106970:intron | 25.0% |
| ! | AATCTAAAGAGGAAATACAT+TGG | - | chr1_3:16868245-16868264 | Msa0106970:intron | 25.0% |
| !! | TTTAGATTTTACTATTGCGA+AGG | - | chr1_3:16868336-16868355 | Msa0106970:intron | 25.0% |
| !! | TTTTTATATTGGGAAAGAGA+AGG | - | chr1_3:16868439-16868458 | Msa0106970:intron | 25.0% |
| !! | ATTTTGTGTGTAGAATCAAA+GGG | - | chr1_3:16868895-16868914 | Msa0106970:CDS | 25.0% |
| !! | TTTTATGTAATTTACCCTAC+CGG | + | chr1_3:16868973-16868992 | None:intergenic | 25.0% |
| ATAGTAACGGTAAATGAAAG+TGG | + | chr1_3:16859572-16859591 | None:intergenic | 30.0% | |
| GGGATCAAATAATAAGAAGT+TGG | + | chr1_3:16859716-16859735 | None:intergenic | 30.0% | |
| ATTATTTGATCCCAATTACC+AGG | - | chr1_3:16859723-16859742 | Msa0106970:intron | 30.0% | |
| CTTCTTTATAACCTGGTAAT+TGG | + | chr1_3:16859737-16859756 | None:intergenic | 30.0% | |
| CAATTACCAGGTTATAAAGA+AGG | - | chr1_3:16859735-16859754 | Msa0106970:intron | 30.0% | |
| ! | CCTTTAAATCCTTTTCTCTT+TGG | + | chr1_3:16859783-16859802 | None:intergenic | 30.0% |
| CCAAAGAGAAAAGGATTTAA+AGG | - | chr1_3:16859780-16859799 | Msa0106970:intron | 30.0% | |
| AAGGATTTAAAGGAACTTCT+AGG | - | chr1_3:16859790-16859809 | Msa0106970:intron | 30.0% | |
| ! | CTTTCAAGAAGATGATTTGT+TGG | + | chr1_3:16859822-16859841 | None:intergenic | 30.0% |
| AATGATAGAAACAAAAGGAG+GGG | - | chr1_3:16860119-16860138 | Msa0106970:intron | 30.0% | |
| !!! | GATATGCGGTTTTAAAAAAC+GGG | - | chr1_3:16860187-16860206 | Msa0106970:intron | 30.0% |
| !!! | TCATAAACGGCAATTTTTTG+CGG | + | chr1_3:16860341-16860360 | None:intergenic | 30.0% |
| TCTATGTCTGTTGTCATAAA+CGG | + | chr1_3:16860354-16860373 | None:intergenic | 30.0% | |
| !! | TTGGAGTTCTAAACTAGATA+AGG | + | chr1_3:16860458-16860477 | None:intergenic | 30.0% |
| !! | TTGCAAATGAACTCTAAAGT+AGG | - | chr1_3:16860732-16860751 | Msa0106970:intron | 30.0% |
| TGATGAGTATATTACTTTGC+AGG | - | chr1_3:16860765-16860784 | Msa0106970:intron | 30.0% | |
| AGTATATTACTTTGCAGGTA+GGG | - | chr1_3:16860770-16860789 | Msa0106970:intron | 30.0% | |
| GGTAAGTTTACCATCTAAAA+AGG | - | chr1_3:16860923-16860942 | Msa0106970:intron | 30.0% | |
| TGTACATGATGAATTGAAAC+AGG | - | chr1_3:16861022-16861041 | Msa0106970:intron | 30.0% | |
| TGTGCTCTTGAAAAATTACA+TGG | + | chr1_3:16861053-16861072 | None:intergenic | 30.0% | |
| GCACACTTGAACAAATTTAA+AGG | - | chr1_3:16861068-16861087 | Msa0106970:intron | 30.0% | |
| !!! | ATTTTTTGATCCCAATTACC+AGG | - | chr1_3:16861419-16861438 | Msa0106970:intron | 30.0% |
| TTCCTTATAACCTGGTAATT+GGG | + | chr1_3:16861432-16861451 | None:intergenic | 30.0% | |
| AATTACCAGGTTATAAGGAA+GGG | - | chr1_3:16861432-16861451 | Msa0106970:intron | 30.0% | |
| ! | ATCATTTCAAAGTTCTAGCT+AGG | - | chr1_3:16861687-16861706 | Msa0106970:intron | 30.0% |
| ! | TCATTTCAAAGTTCTAGCTA+GGG | - | chr1_3:16861688-16861707 | Msa0106970:intron | 30.0% |
| ACTCAACCTATTTCAAATTG+AGG | - | chr1_3:16861743-16861762 | Msa0106970:CDS | 30.0% | |
| CTCAACCTATTTCAAATTGA+GGG | - | chr1_3:16861744-16861763 | Msa0106970:CDS | 30.0% | |
| TCAACCTATTTCAAATTGAG+GGG | - | chr1_3:16861745-16861764 | Msa0106970:CDS | 30.0% | |
| TGATGTGTATTCAAAATACC+CGG | - | chr1_3:16862151-16862170 | Msa0106970:intron | 30.0% | |
| AATATGGTTACTATGTTCAG+TGG | - | chr1_3:16862191-16862210 | Msa0106970:intron | 30.0% | |
| GTATTTATATTAGATCTGGG+GGG | + | chr1_3:16862241-16862260 | None:intergenic | 30.0% | |
| GGTATTTATATTAGATCTGG+GGG | + | chr1_3:16862242-16862261 | None:intergenic | 30.0% | |
| CTGATAGTATCTGTGTAATA+TGG | + | chr1_3:16862263-16862282 | None:intergenic | 30.0% | |
| TGAAGAAAAAAGAGATGGAA+GGG | + | chr1_3:16862349-16862368 | None:intergenic | 30.0% | |
| ATGAAGAAAAAAGAGATGGA+AGG | + | chr1_3:16862350-16862369 | None:intergenic | 30.0% | |
| AATTTCACAAAAAAATGGCC+AGG | - | chr1_3:16862388-16862407 | Msa0106970:intron | 30.0% | |
| AATAGAAACACGATGATATG+TGG | + | chr1_3:16862468-16862487 | None:intergenic | 30.0% | |
| ATCTTGACAAAATATTTGGG+GGG | + | chr1_3:16862532-16862551 | None:intergenic | 30.0% | |
| GATCTTGACAAAATATTTGG+GGG | + | chr1_3:16862533-16862552 | None:intergenic | 30.0% | |
| GGATCTTGACAAAATATTTG+GGG | + | chr1_3:16862534-16862553 | None:intergenic | 30.0% | |
| CGGATCTTGACAAAATATTT+GGG | + | chr1_3:16862535-16862554 | None:intergenic | 30.0% | |
| TATATTAACATAGTCAGTGG+CGG | + | chr1_3:16862555-16862574 | None:intergenic | 30.0% | |
| ATATTTGCAGAATGTTCCAA+AGG | - | chr1_3:16862620-16862639 | Msa0106970:intron | 30.0% | |
| ACGATAGTATTCATGGTTAT+AGG | - | chr1_3:16862724-16862743 | Msa0106970:CDS | 30.0% | |
| GTGTTTGATGTTTCAATTGT+TGG | - | chr1_3:16862837-16862856 | Msa0106970:CDS | 30.0% | |
| ACAATAGAACAAACAGCTAA+GGG | + | chr1_3:16862870-16862889 | None:intergenic | 30.0% | |
| AACAATAGAACAAACAGCTA+AGG | + | chr1_3:16862871-16862890 | None:intergenic | 30.0% | |
| GCTTAGATTCAAATGAAACT+TGG | + | chr1_3:16862997-16863016 | None:intergenic | 30.0% | |
| CATAACATCCTTGTTCTTAA+TGG | - | chr1_3:16863187-16863206 | Msa0106970:intron | 30.0% | |
| TTCTTAATGGTGTGATTCAT+TGG | - | chr1_3:16863200-16863219 | Msa0106970:intron | 30.0% | |
| !!! | ATTTTATCCCCTTTGAAACA+CGG | + | chr1_3:16863460-16863479 | None:intergenic | 30.0% |
| TTTACCCATGTATCTTACAA+AGG | - | chr1_3:16863763-16863782 | Msa0106970:intron | 30.0% | |
| GTATTCCTTTGTAAGATACA+TGG | + | chr1_3:16863771-16863790 | None:intergenic | 30.0% | |
| GTATCTTACAAAGGAATACT+AGG | - | chr1_3:16863772-16863791 | Msa0106970:intron | 30.0% | |
| !! | ATTGATTCGTGAAATTTCGT+AGG | + | chr1_3:16863950-16863969 | None:intergenic | 30.0% |
| AATGCCTTGCTACTATATAA+TGG | + | chr1_3:16863999-16864018 | None:intergenic | 30.0% | |
| ! | CATCTTTGTACCAATTTTGT+CGG | - | chr1_3:16864103-16864122 | Msa0106970:intron | 30.0% |
| !! | CAACTGATTTTTCCAAAAAC+AGG | - | chr1_3:16864152-16864171 | Msa0106970:intron | 30.0% |
| CACTTTCTACATTAGTATGT+GGG | + | chr1_3:16864356-16864375 | None:intergenic | 30.0% | |
| CACATACTAATGTAGAAAGT+GGG | - | chr1_3:16864355-16864374 | Msa0106970:intron | 30.0% | |
| ACATACTAATGTAGAAAGTG+GGG | - | chr1_3:16864356-16864375 | Msa0106970:intron | 30.0% | |
| TGGATTCAAAAATTATTCCC+TGG | - | chr1_3:16864435-16864454 | Msa0106970:intron | 30.0% | |
| AAATTCCAAGGAATGAAGAT+AGG | + | chr1_3:16864530-16864549 | None:intergenic | 30.0% | |
| GAAAATTATATTCCCAGGAA+AGG | + | chr1_3:16864687-16864706 | None:intergenic | 30.0% | |
| !! | ATTTTCCCATCCTTTTTTCA+TGG | - | chr1_3:16864701-16864720 | Msa0106970:intron | 30.0% |
| !! | TTTTCCCATCCTTTTTTCAT+GGG | - | chr1_3:16864702-16864721 | Msa0106970:intron | 30.0% |
| TATTCCCATGAAAAAAGGAT+GGG | + | chr1_3:16864709-16864728 | None:intergenic | 30.0% | |
| TTATTCCCATGAAAAAAGGA+TGG | + | chr1_3:16864710-16864729 | None:intergenic | 30.0% | |
| AGGAACAAAATAATATGCCT+AGG | + | chr1_3:16864779-16864798 | None:intergenic | 30.0% | |
| AATTCCTATGTTTGGTAGAA+AGG | + | chr1_3:16864799-16864818 | None:intergenic | 30.0% | |
| AGGAACAAAAATACATTCCT+GGG | + | chr1_3:16864842-16864861 | None:intergenic | 30.0% | |
| AAGGAACAAAAATACATTCC+TGG | + | chr1_3:16864843-16864862 | None:intergenic | 30.0% | |
| GAGTTAAATGATAATCTAGG+GGG | + | chr1_3:16864877-16864896 | None:intergenic | 30.0% | |
| AATTGAATGGGAAAATGTTG+GGG | + | chr1_3:16865029-16865048 | None:intergenic | 30.0% | |
| TTTCATTGGTCCTTACTATT+GGG | + | chr1_3:16865078-16865097 | None:intergenic | 30.0% | |
| ! | TTTTCATTGGTCCTTACTAT+TGG | + | chr1_3:16865079-16865098 | None:intergenic | 30.0% |
| !! | AGTATTAAAACATTTTGGCG+TGG | - | chr1_3:16865124-16865143 | Msa0106970:intron | 30.0% |
| CACGAAGAAATTAGAAACAA+TGG | + | chr1_3:16865235-16865254 | None:intergenic | 30.0% | |
| TATGAATTTCTTTGTTGCAG+AGG | - | chr1_3:16865413-16865432 | Msa0106970:intron | 30.0% | |
| !! | TATGTGGAGAAATTTTGGAA+AGG | - | chr1_3:16865448-16865467 | Msa0106970:intron | 30.0% |
| TTTGCAAAGTCTCTCAAATA+TGG | - | chr1_3:16865574-16865593 | Msa0106970:intron | 30.0% | |
| ! | TATTGGTGGATCATATTTCA+AGG | - | chr1_3:16865618-16865637 | Msa0106970:intron | 30.0% |
| GAAGCTCAAATGATAACAAA+TGG | - | chr1_3:16865769-16865788 | Msa0106970:CDS | 30.0% | |
| ATCAAATGAATTTCTCACCT+GGG | + | chr1_3:16865840-16865859 | None:intergenic | 30.0% | |
| AATCAAATGAATTTCTCACC+TGG | + | chr1_3:16865841-16865860 | None:intergenic | 30.0% | |
| ! | GATTTGAAGCTTAATGCAAA+TGG | + | chr1_3:16866085-16866104 | None:intergenic | 30.0% |
| !!! | TAAGTTTTTTGAGGGACAAA+AGG | - | chr1_3:16866182-16866201 | Msa0106970:intron | 30.0% |
| !! | AAATTAACTCTAAAGCAGGT+AGG | - | chr1_3:16866285-16866304 | Msa0106970:intron | 30.0% |
| TGTGGTTCATGAATTGAAAT+AGG | - | chr1_3:16866502-16866521 | Msa0106970:intron | 30.0% | |
| TATGATCTTGAAAAGTTGCA+TGG | + | chr1_3:16866533-16866552 | None:intergenic | 30.0% | |
| CTAATTCTATGACTATTGGT+TGG | - | chr1_3:16866642-16866661 | Msa0106970:intron | 30.0% | |
| TACTATCACTAAATCCAACA+AGG | - | chr1_3:16866751-16866770 | Msa0106970:intron | 30.0% | |
| ACTATCACTAAATCCAACAA+GGG | - | chr1_3:16866752-16866771 | Msa0106970:intron | 30.0% | |
| AAAAACCTTGCAACTTCTTA+GGG | + | chr1_3:16866784-16866803 | None:intergenic | 30.0% | |
| TGTCATGGATCAAAGAAAAT+AGG | + | chr1_3:16866880-16866899 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGATCCATGACA+AGG | - | chr1_3:16866880-16866899 | Msa0106970:intron | 30.0% |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1_3:16866893-16866912 | Msa0106970:intron | 30.0% | |
| AATTTCTTTGATCCATGACA+AGG | - | chr1_3:16867076-16867095 | Msa0106970:intron | 30.0% | |
| TCTTCTTTATAACCTTGTCA+TGG | + | chr1_3:16867091-16867110 | None:intergenic | 30.0% | |
| GTCATGGATGAAAGAAATTA+AGG | + | chr1_3:16867266-16867285 | None:intergenic | 30.0% | |
| AATTTCTTTCATCCATGACA+AGG | - | chr1_3:16867267-16867286 | Msa0106970:CDS | 30.0% | |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1_3:16866893-16866912 | Msa0106970:intron | 30.0% | |
| TATAAAGAAGGGATCTCTTA+TGG | - | chr1_3:16867291-16867310 | Msa0106970:intron | 30.0% | |
| ! | GTGATCATGATATTCTAAAG+AGG | - | chr1_3:16867313-16867332 | Msa0106970:intron | 30.0% |
| GTCATGGATCAAAGAAATTA+AGG | + | chr1_3:16867075-16867094 | None:intergenic | 30.0% | |
| AATTTCTTTGATCCATGACA+AGG | - | chr1_3:16867076-16867095 | Msa0106970:intron | 30.0% | |
| CATGACAAGGTTATAAAGAA+GGG | - | chr1_3:16866893-16866912 | Msa0106970:intron | 30.0% | |
| ! | ATTCTAAAGAGGAAAGACAT+TGG | - | chr1_3:16867520-16867539 | Msa0106970:intron | 30.0% |
| !!! | AATTTTTTTGATCCATGTCC+AGG | - | chr1_3:16868188-16868207 | Msa0106970:intron | 30.0% |
| ATTTCTTTATAACCTGGACA+TGG | + | chr1_3:16868203-16868222 | None:intergenic | 30.0% | |
| GAGATCATTTCTTTATAACC+TGG | + | chr1_3:16868209-16868228 | None:intergenic | 30.0% | |
| AATACATTGGAGAAACTTGT+AGG | - | chr1_3:16868258-16868277 | Msa0106970:intron | 30.0% | |
| !!! | TTTTGGGACCCAATAAAAAT+AGG | - | chr1_3:16868664-16868683 | Msa0106970:intron | 30.0% |
| ! | TCCCAAATGTCAATTTTTGT+AGG | - | chr1_3:16868830-16868849 | Msa0106970:intron | 30.0% |
| GCCTACAAAAATTGACATTT+GGG | + | chr1_3:16868834-16868853 | None:intergenic | 30.0% | |
| AGCCTACAAAAATTGACATT+TGG | + | chr1_3:16868835-16868854 | None:intergenic | 30.0% | |
| ! | CATTTTGTGTGTAGAATCAA+AGG | - | chr1_3:16868894-16868913 | Msa0106970:CDS | 30.0% |
| GATGAAACACAATACATTCA+AGG | - | chr1_3:16868927-16868946 | Msa0106970:CDS | 30.0% | |
| ! | ACACAATACATTCAAGGTTT+TGG | - | chr1_3:16868933-16868952 | Msa0106970:CDS | 30.0% |
| TTTATGTAATTTACCCTACC+GGG | + | chr1_3:16868972-16868991 | None:intergenic | 30.0% | |
| TGAAGACATGACTATGAAAG+TGG | - | chr1_3:16859427-16859446 | Msa0106970:CDS | 35.0% | |
| !!! | AGAAGATCTGTTTTGACTAC+TGG | - | chr1_3:16859473-16859492 | Msa0106970:intron | 35.0% |
| CCTTGATGGAGTAATAGTAA+CGG | + | chr1_3:16859585-16859604 | None:intergenic | 35.0% | |
| CGTTACTATTACTCCATCAA+GGG | - | chr1_3:16859583-16859602 | Msa0106970:intron | 35.0% | |
| GGTGATAATCCAAAGAGAAA+AGG | - | chr1_3:16859771-16859790 | Msa0106970:intron | 35.0% | |
| ! | TTTTGTTGCGGCCTTTTTAT+CGG | + | chr1_3:16860219-16860238 | None:intergenic | 35.0% |
| ATAAAAAGGCCGCAACAAAA+AGG | - | chr1_3:16860219-16860238 | Msa0106970:intron | 35.0% | |
| ! | CTACCTATACCTTTTTGTTG+CGG | + | chr1_3:16860231-16860250 | None:intergenic | 35.0% |
| !! | ACCGTTTTTCACCGTTTTTA+CGG | - | chr1_3:16860259-16860278 | Msa0106970:intron | 35.0% |
| TCCGTAAAAACGGTGAAAAA+CGG | + | chr1_3:16860263-16860282 | None:intergenic | 35.0% | |
| ATGACAACAGACATAGAATC+TGG | - | chr1_3:16860357-16860376 | Msa0106970:intron | 35.0% | |
| TTAAATAACGGTCACAGTCA+AGG | + | chr1_3:16860625-16860644 | None:intergenic | 35.0% | |
| GAGTATATTACTTTGCAGGT+AGG | - | chr1_3:16860769-16860788 | Msa0106970:intron | 35.0% | |
| CTCTCATTAACAACTTCAAC+TGG | + | chr1_3:16860834-16860853 | None:intergenic | 35.0% | |
| TTGTCAAAATCTTACGTCCA+TGG | - | chr1_3:16860888-16860907 | Msa0106970:intron | 35.0% | |
| GGGATTGCAAATTTAAGAGT+TGG | - | chr1_3:16861089-16861108 | Msa0106970:intron | 35.0% | |
| !! | TGCAAATTTAAGAGTTGGTG+AGG | - | chr1_3:16861094-16861113 | Msa0106970:intron | 35.0% |
| AGTCACAAGAGATCTTCTAT+TGG | + | chr1_3:16861156-16861175 | None:intergenic | 35.0% | |
| ATAGTAACGGTGAATGAAAG+TGG | + | chr1_3:16861257-16861276 | None:intergenic | 35.0% | |
| CCTTGATGGAGTAATAGTAA+CGG | + | chr1_3:16859585-16859604 | None:intergenic | 35.0% | |
| CGTTACTATTACTCCATCAA+GGG | - | chr1_3:16859583-16859602 | Msa0106970:intron | 35.0% | |
| ATCCCAATTACCAGGTTATA+AGG | - | chr1_3:16859731-16859750 | Msa0106970:intron | 35.0% | |
| CTTCCTTATAACCTGGTAAT+TGG | + | chr1_3:16861433-16861452 | None:intergenic | 35.0% | |
| CAATTACCAGGTTATAAGGA+AGG | - | chr1_3:16861431-16861450 | Msa0106970:intron | 35.0% | |
| TGAATTATCACCACAAGAAG+AGG | + | chr1_3:16861459-16861478 | None:intergenic | 35.0% | |
| ! | GTTACCCCTCAATTTGAAAT+AGG | + | chr1_3:16861752-16861771 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr1_3:16861841-16861860 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr1_3:16861840-16861859 | Msa0106970:CDS | 35.0% | |
| !! | TGAAGCTGTTTTGCGTTATT+TGG | - | chr1_3:16862310-16862329 | Msa0106970:intron | 35.0% |
| GAAGAAAAAAGAGATGGAAG+GGG | + | chr1_3:16862348-16862367 | None:intergenic | 35.0% | |
| GCGGATCTTGACAAAATATT+TGG | + | chr1_3:16862536-16862555 | None:intergenic | 35.0% | |
| ! | CCTCTTTTCATAAACTCCTT+TGG | + | chr1_3:16862639-16862658 | None:intergenic | 35.0% |
| CCAAAGGAGTTTATGAAAAG+AGG | - | chr1_3:16862636-16862655 | Msa0106970:intron | 35.0% | |
| !! | AAACTCTCTGGAGTTGAAAA+TGG | - | chr1_3:16862668-16862687 | Msa0106970:intron | 35.0% |
| !! | AACTCTCTGGAGTTGAAAAT+GGG | - | chr1_3:16862669-16862688 | Msa0106970:intron | 35.0% |
| AAAGAATGCAAAGTGGAGAT+TGG | - | chr1_3:16862774-16862793 | Msa0106970:CDS | 35.0% | |
| CAATAGAACAAACAGCTAAG+GGG | + | chr1_3:16862869-16862888 | None:intergenic | 35.0% | |
| CAAATATCATGATCAGCCTT+TGG | - | chr1_3:16863016-16863035 | Msa0106970:CDS | 35.0% | |
| TTAAACAAACCAAACTCGAG+AGG | + | chr1_3:16863141-16863160 | None:intergenic | 35.0% | |
| TTATGATCGTGAAATTGGAG+CGG | + | chr1_3:16863172-16863191 | None:intergenic | 35.0% | |
| GGATGTTATGATCGTGAAAT+TGG | + | chr1_3:16863177-16863196 | None:intergenic | 35.0% | |
| GAATCACACCATTAAGAACA+AGG | + | chr1_3:16863198-16863217 | None:intergenic | 35.0% | |
| ! | TGGGTTTGTAAAAGCACAAT+TGG | - | chr1_3:16863239-16863258 | Msa0106970:intron | 35.0% |
| ! | TGTAAAAGCACAATTGGTGT+TGG | - | chr1_3:16863245-16863264 | Msa0106970:intron | 35.0% |
| !!! | TCAAGTTCGGCTATTTTAAC+GGG | + | chr1_3:16863303-16863322 | None:intergenic | 35.0% |
| !! | CTCAAGTTCGGCTATTTTAA+CGG | + | chr1_3:16863304-16863323 | None:intergenic | 35.0% |
| TGCGTAAGTTAACTCAAGTT+CGG | + | chr1_3:16863316-16863335 | None:intergenic | 35.0% | |
| CTTAGTTAGTTAAATCGCAC+AGG | - | chr1_3:16863344-16863363 | Msa0106970:intron | 35.0% | |
| !!! | CCATCTATTTTTGCTCATTC+CGG | + | chr1_3:16863382-16863401 | None:intergenic | 35.0% |
| CGGAATGAGCAAAAATAGAT+GGG | - | chr1_3:16863380-16863399 | Msa0106970:intron | 35.0% | |
| ATCAAGATTTCGAATCCACA+TGG | - | chr1_3:16863484-16863503 | Msa0106970:intron | 35.0% | |
| GTTCATTAATCAAGTCCATG+TGG | + | chr1_3:16863502-16863521 | None:intergenic | 35.0% | |
| AGTGAGATATCAAGAGGTTA+GGG | + | chr1_3:16863658-16863677 | None:intergenic | 35.0% | |
| TAACTGAGTGAGATATCAAG+AGG | + | chr1_3:16863664-16863683 | None:intergenic | 35.0% | |
| !! | TTGACATTTGGCTCAACTTT+TGG | + | chr1_3:16863888-16863907 | None:intergenic | 35.0% |
| AAACTCTCACTCACTATTAG+TGG | - | chr1_3:16864202-16864221 | Msa0106970:intron | 35.0% | |
| CCACTTTCTACATTAGTATG+TGG | + | chr1_3:16864357-16864376 | None:intergenic | 35.0% | |
| CCACATACTAATGTAGAAAG+TGG | - | chr1_3:16864354-16864373 | Msa0106970:intron | 35.0% | |
| !!! | CACTTTTTCGACAAATTCCT+AGG | + | chr1_3:16864499-16864518 | None:intergenic | 35.0% |
| GATTTCCTATCTTCATTCCT+TGG | - | chr1_3:16864522-16864541 | Msa0106970:intron | 35.0% | |
| GTAATGGTCTATCCATGTAA+CGG | + | chr1_3:16864568-16864587 | None:intergenic | 35.0% | |
| !!! | ATGAGTTTTGTTCAGTACGT+GGG | - | chr1_3:16864656-16864675 | Msa0106970:intron | 35.0% |
| GATGGGAAAATTATATTCCC+AGG | + | chr1_3:16864692-16864711 | None:intergenic | 35.0% | |
| ATGTGAGTTAAGCATATTCC+TGG | - | chr1_3:16864741-16864760 | Msa0106970:intron | 35.0% | |
| TGTGAGTTAAGCATATTCCT+GGG | - | chr1_3:16864742-16864761 | Msa0106970:intron | 35.0% | |
| CCTAGGAATAATTAATACCC+AGG | + | chr1_3:16864762-16864781 | None:intergenic | 35.0% | |
| CCTGGGTATTAATTATTCCT+AGG | - | chr1_3:16864759-16864778 | Msa0106970:intron | 35.0% | |
| TGTTCCTTTCTACCAAACAT+AGG | - | chr1_3:16864792-16864811 | Msa0106970:intron | 35.0% | |
| ATTGAATGGGAAAATGTTGG+GGG | + | chr1_3:16865028-16865047 | None:intergenic | 35.0% | |
| GGACCAATGAAAATAAACAC+CGG | - | chr1_3:16865086-16865105 | Msa0106970:intron | 35.0% | |
| ! | TACTATTGACTATTGATGGC+CGG | + | chr1_3:16865108-16865127 | None:intergenic | 35.0% |
| GAACACCATTTGGTAAGTTA+AGG | + | chr1_3:16865492-16865511 | None:intergenic | 35.0% | |
| TGATGAGAGTGAAATACCAA+TGG | - | chr1_3:16865747-16865766 | Msa0106970:CDS | 35.0% | |
| GTTATCATTTGAGCTTCCAT+TGG | + | chr1_3:16865766-16865785 | None:intergenic | 35.0% | |
| ACTCTTAAGCAAAAATTCCC+AGG | - | chr1_3:16865820-16865839 | Msa0106970:CDS | 35.0% | |
| ACTTACCAAGATATGACCAT+GGG | + | chr1_3:16866423-16866442 | None:intergenic | 35.0% | |
| TACTTACCAAGATATGACCA+TGG | + | chr1_3:16866424-16866443 | None:intergenic | 35.0% | |
| CTATATCCACTTTCATAGCA+GGG | + | chr1_3:16866601-16866620 | None:intergenic | 35.0% | |
| ACTATATCCACTTTCATAGC+AGG | + | chr1_3:16866602-16866621 | None:intergenic | 35.0% | |
| GAAAAACCTTGCAACTTCTT+AGG | + | chr1_3:16866785-16866804 | None:intergenic | 35.0% | |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_3:16866895-16866914 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_3:16866892-16866911 | Msa0106970:intron | 35.0% | |
| TATAAAGAAGGGATCTCTTC+TGG | - | chr1_3:16866904-16866923 | Msa0106970:intron | 35.0% | |
| ! | GTGATCGTGATATTCTAAAG+AGG | - | chr1_3:16866926-16866945 | Msa0106970:intron | 35.0% |
| ! | GTGATCGTGATATTCTAAAG+TGG | - | chr1_3:16866926-16866945 | Msa0106970:intron | 35.0% |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_3:16866895-16866914 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_3:16866892-16866911 | Msa0106970:intron | 35.0% | |
| ! | ATTCTAAAGAGGAAAGACGA+TGG | - | chr1_3:16867324-16867343 | Msa0106970:intron | 35.0% |
| CCTTCTTTATAACCTTGTCA+TGG | + | chr1_3:16866895-16866914 | None:intergenic | 35.0% | |
| CCATGACAAGGTTATAAAGA+AGG | - | chr1_3:16866892-16866911 | Msa0106970:intron | 35.0% | |
| AAGACATTGGAGAAACTTGT+AGG | - | chr1_3:16867533-16867552 | Msa0106970:intron | 35.0% | |
| AGATTGACAAACCAACCAAA+TGG | + | chr1_3:16868785-16868804 | None:intergenic | 35.0% | |
| !! | TTTGGTTGGTTTGTCAATCT+TGG | - | chr1_3:16868785-16868804 | Msa0106970:intron | 35.0% |
| CCTCTTTCCATAAATCTCTT+TGG | + | chr1_3:16869081-16869100 | None:intergenic | 35.0% | |
| CCAAAGAGATTTATGGAAAG+AGG | - | chr1_3:16869078-16869097 | Msa0106970:exon | 35.0% | |
| !!! | GATCTGTTTTGACTACTGGT+TGG | - | chr1_3:16859477-16859496 | Msa0106970:intron | 40.0% |
| CCGTTACTATTACTCCATCA+AGG | - | chr1_3:16859582-16859601 | Msa0106970:intron | 40.0% | |
| TGGATTATCACCACAAGAAG+AGG | + | chr1_3:16859763-16859782 | None:intergenic | 40.0% | |
| ATAGAAACAAAAGGAGGGGA+AGG | - | chr1_3:16860123-16860142 | Msa0106970:intron | 40.0% | |
| TAGAAACAAAAGGAGGGGAA+GGG | - | chr1_3:16860124-16860143 | Msa0106970:intron | 40.0% | |
| !!! | GCAATTTTTTGCGGCTGTAA+CGG | + | chr1_3:16860332-16860351 | None:intergenic | 40.0% |
| TTACCAACATATTGCTGCCA+TGG | + | chr1_3:16860908-16860927 | None:intergenic | 40.0% | |
| AGAAGATCTCTTGTGACTAC+TGG | - | chr1_3:16861158-16861177 | Msa0106970:CDS | 40.0% | |
| CCGTTACTATTACTCCATCA+AGG | - | chr1_3:16859582-16859601 | Msa0106970:intron | 40.0% | |
| TTCAAATTGAGGGGTAACCT+TGG | - | chr1_3:16861754-16861773 | Msa0106970:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr1_3:16861790-16861809 | Msa0106970:CDS | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr1_3:16861834-16861853 | Msa0106970:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr1_3:16861835-16861854 | Msa0106970:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1_3:16861866-16861885 | Msa0106970:CDS | 40.0% | |
| ATAGGTTAAAAAGGGCAACC+CGG | + | chr1_3:16861932-16861951 | None:intergenic | 40.0% | |
| TGTGTTTCTCCAGATTCAGA+AGG | - | chr1_3:16862095-16862114 | Msa0106970:intron | 40.0% | |
| ACATTACCACCTTCTGAATC+TGG | + | chr1_3:16862107-16862126 | None:intergenic | 40.0% | |
| ATGGTTACTATGTTCAGTGG+CGG | - | chr1_3:16862194-16862213 | Msa0106970:intron | 40.0% | |
| ! | GGATACCACCTTTTGATCAA+CGG | + | chr1_3:16862425-16862444 | None:intergenic | 40.0% |
| AGGAAGTCATGAAAACTCTC+TGG | - | chr1_3:16862656-16862675 | Msa0106970:intron | 40.0% | |
| !! | ACTCTCTGGAGTTGAAAATG+GGG | - | chr1_3:16862670-16862689 | Msa0106970:intron | 40.0% |
| CATGGTTATAGGTTCTCTGA+AGG | - | chr1_3:16862735-16862754 | Msa0106970:CDS | 40.0% | |
| ! | GTTATAGGTTCTCTGAAGGT+TGG | - | chr1_3:16862739-16862758 | Msa0106970:CDS | 40.0% |
| TGATAAGTTCCTCTCGAGTT+TGG | - | chr1_3:16863129-16863148 | Msa0106970:intron | 40.0% | |
| ! | CTTTTACAAACCCAACAGTG+TGG | + | chr1_3:16863233-16863252 | None:intergenic | 40.0% |
| GAACTTGAGTTAACTTACGC+AGG | - | chr1_3:16863315-16863334 | Msa0106970:intron | 40.0% | |
| !!! | GCACAGGTGTTTTTTTTAGC+CGG | - | chr1_3:16863360-16863379 | Msa0106970:intron | 40.0% |
| CCGGAATGAGCAAAAATAGA+TGG | - | chr1_3:16863379-16863398 | Msa0106970:intron | 40.0% | |
| CAAGAGGTTAGGGAATAATG+TGG | + | chr1_3:16863648-16863667 | None:intergenic | 40.0% | |
| GAGTGAGATATCAAGAGGTT+AGG | + | chr1_3:16863659-16863678 | None:intergenic | 40.0% | |
| TAGGGAGAAACCGACAAAAT+TGG | + | chr1_3:16864116-16864135 | None:intergenic | 40.0% | |
| TCACTCACTATTAGTGGCAT+GGG | - | chr1_3:16864208-16864227 | Msa0106970:intron | 40.0% | |
| !! | TTAGGGGAGTGTTTGTTTCT+TGG | - | chr1_3:16864415-16864434 | Msa0106970:intron | 40.0% |
| TTCCTGGGAATGATATTCCA+GGG | + | chr1_3:16864455-16864474 | None:intergenic | 40.0% | |
| TTTCCTGGGAATGATATTCC+AGG | + | chr1_3:16864456-16864475 | None:intergenic | 40.0% | |
| CAAGTAAGTGAACCGTTACA+TGG | - | chr1_3:16864553-16864572 | Msa0106970:intron | 40.0% | |
| !!! | CATGAGTTTTGTTCAGTACG+TGG | - | chr1_3:16864655-16864674 | Msa0106970:intron | 40.0% |
| GAAGTGGGAACCAATTGTAA+TGG | + | chr1_3:16865056-16865075 | None:intergenic | 40.0% | |
| !! | TGGCCGGTGTTTATTTTCAT+TGG | + | chr1_3:16865092-16865111 | None:intergenic | 40.0% |
| GTGAAGTGTGAAGTGAAACT+CGG | + | chr1_3:16865201-16865220 | None:intergenic | 40.0% | |
| AGTTTCACTTCACACTTCAC+AGG | - | chr1_3:16865201-16865220 | Msa0106970:intron | 40.0% | |
| GAGGATTCCCAAGAAATATG+TGG | - | chr1_3:16865432-16865451 | Msa0106970:intron | 40.0% | |
| AGGTAGGAACATTGAAGACA+CGG | - | chr1_3:16866301-16866320 | Msa0106970:intron | 40.0% | |
| ! | ATTCTAAAGAGGACAGACAC+TGG | - | chr1_3:16866937-16866956 | Msa0106970:intron | 40.0% |
| !! | GAAGAGCATGCATTTTTGGA+AGG | + | chr1_3:16866978-16866997 | None:intergenic | 40.0% |
| TCCAAAAATGCATGCTCTTC+AGG | - | chr1_3:16866978-16866997 | Msa0106970:intron | 40.0% | |
| CCAAAAATGCATGCTCTTCA+GGG | - | chr1_3:16866979-16866998 | Msa0106970:intron | 40.0% | |
| AAGACACTCGAGAAACTTGT+AGG | - | chr1_3:16867146-16867165 | Msa0106970:intron | 40.0% | |
| !! | AAGAGCATGCACTTTTGGAA+GGG | + | chr1_3:16867173-16867192 | None:intergenic | 40.0% |
| AAGACGATGGAGAAACTTGT+AGG | - | chr1_3:16867337-16867356 | Msa0106970:intron | 40.0% | |
| !! | AAGAGCTTGCACTTTTGGAA+GGG | + | chr1_3:16867364-16867383 | None:intergenic | 40.0% |
| !!! | GTAGATCATGCAGTTTTGGA+CGG | + | chr1_3:16868286-16868305 | None:intergenic | 40.0% |
| ! | CTCTGTAGATCATGCAGTTT+TGG | + | chr1_3:16868290-16868309 | None:intergenic | 40.0% |
| TTTGGTGAATTCCAAACACC+CGG | - | chr1_3:16868951-16868970 | Msa0106970:CDS | 40.0% | |
| GCATGCACCAAAGAGATTTA+TGG | - | chr1_3:16869071-16869090 | Msa0106970:exon | 40.0% | |
| GAGGTCCCTTCTTTATAACC+TGG | + | chr1_3:16859744-16859763 | None:intergenic | 45.0% | |
| AAAGAAGGGACCTCTTCTTG+TGG | - | chr1_3:16859750-16859769 | Msa0106970:intron | 45.0% | |
| AACCAAAAGGGTGGTAGCAA+AGG | - | chr1_3:16860069-16860088 | Msa0106970:intron | 45.0% | |
| ! | ACGGGCTGTTACCGATAAAA+AGG | - | chr1_3:16860205-16860224 | Msa0106970:intron | 45.0% |
| ! | AGGCCGCAACAAAAAGGTAT+AGG | - | chr1_3:16860225-16860244 | Msa0106970:intron | 45.0% |
| ! | AGGTGTTGCGATAAGGATTG+CGG | + | chr1_3:16860563-16860582 | None:intergenic | 45.0% |
| CCTTATCGCAACACCTGTAA+CGG | - | chr1_3:16860567-16860586 | Msa0106970:intron | 45.0% | |
| ACACCTGTAACGGTCGAAAT+CGG | - | chr1_3:16860577-16860596 | Msa0106970:intron | 45.0% | |
| ! | CAGTGGAGGCATGATTAAGA+AGG | - | chr1_3:16860794-16860813 | Msa0106970:intron | 45.0% |
| !! | AGTTGGTGAGGACAAGACTA+TGG | - | chr1_3:16861106-16861125 | Msa0106970:intron | 45.0% |
| GATCTCTTGTGACTACTGGT+TGG | - | chr1_3:16861162-16861181 | Msa0106970:CDS | 45.0% | |
| ! | AGTTCTAGCTAGGGTAGTGT+AGG | - | chr1_3:16861697-16861716 | Msa0106970:intron | 45.0% |
| ! | GTTCTAGCTAGGGTAGTGTA+GGG | - | chr1_3:16861698-16861717 | Msa0106970:intron | 45.0% |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr1_3:16861796-16861815 | Msa0106970:CDS | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr1_3:16861797-16861816 | Msa0106970:CDS | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1_3:16861830-16861849 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | - | chr1_3:16861862-16861881 | Msa0106970:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1_3:16861865-16861884 | Msa0106970:CDS | 45.0% | |
| GTTTCTCCAGATTCAGAAGG+TGG | - | chr1_3:16862098-16862117 | Msa0106970:intron | 45.0% | |
| TCACAAAAAAATGGCCAGGC+AGG | - | chr1_3:16862392-16862411 | Msa0106970:intron | 45.0% | |
| GACTCGAACCGTTGATCAAA+AGG | - | chr1_3:16862414-16862433 | Msa0106970:intron | 45.0% | |
| TCGAACCGTTGATCAAAAGG+TGG | - | chr1_3:16862417-16862436 | Msa0106970:intron | 45.0% | |
| !! | GTGTGTTGGTTCATAGTGCT+TGG | + | chr1_3:16862446-16862465 | None:intergenic | 45.0% |
| CACGATGATATGTGGTGTGT+TGG | + | chr1_3:16862460-16862479 | None:intergenic | 45.0% | |
| !! | CTCTCTGGAGTTGAAAATGG+GGG | - | chr1_3:16862671-16862690 | Msa0106970:intron | 45.0% |
| !! | TCTCTGGAGTTGAAAATGGG+GGG | - | chr1_3:16862672-16862691 | Msa0106970:intron | 45.0% |
| TTGGTCCTTAACCACACTGT+TGG | - | chr1_3:16863219-16863238 | Msa0106970:intron | 45.0% | |
| TGGTCCTTAACCACACTGTT+GGG | - | chr1_3:16863220-16863239 | Msa0106970:intron | 45.0% | |
| CAAACCCAACAGTGTGGTTA+AGG | + | chr1_3:16863227-16863246 | None:intergenic | 45.0% | |
| TGGGAGAAGAGCAATTCTCT+TGG | - | chr1_3:16863399-16863418 | Msa0106970:intron | 45.0% | |
| !! | CTTGGTGTTGTGCGACATTT+AGG | - | chr1_3:16863417-16863436 | Msa0106970:intron | 45.0% |
| TCCCTACACCGTGTTTCAAA+GGG | - | chr1_3:16863449-16863468 | Msa0106970:intron | 45.0% | |
| GATGCTAGTTGCGAGACAAT+GGG | + | chr1_3:16863733-16863752 | None:intergenic | 45.0% | |
| TGATGCTAGTTGCGAGACAA+TGG | + | chr1_3:16863734-16863753 | None:intergenic | 45.0% | |
| CCAACTGAGTTAAACTCACG+AGG | + | chr1_3:16864030-16864049 | None:intergenic | 45.0% | |
| CCTCGTGAGTTTAACTCAGT+TGG | - | chr1_3:16864027-16864046 | Msa0106970:intron | 45.0% | |
| CTCACTCACTATTAGTGGCA+TGG | - | chr1_3:16864207-16864226 | Msa0106970:intron | 45.0% | |
| CACTCACTATTAGTGGCATG+GGG | - | chr1_3:16864209-16864228 | Msa0106970:intron | 45.0% | |
| TTCCCTGGAATATCATTCCC+AGG | - | chr1_3:16864450-16864469 | Msa0106970:intron | 45.0% | |
| GTGGGGATCACATGGTAAAA+TGG | - | chr1_3:16864625-16864644 | Msa0106970:intron | 45.0% | |
| GGGATCACATGGTAAAATGG+AGG | - | chr1_3:16864628-16864647 | Msa0106970:intron | 45.0% | |
| ! | TTTTCCCAAGCTCTATTCCC+AGG | - | chr1_3:16864822-16864841 | Msa0106970:intron | 45.0% |
| CATTCCTGGGAATAGAGCTT+GGG | + | chr1_3:16864829-16864848 | None:intergenic | 45.0% | |
| ACATTCCTGGGAATAGAGCT+TGG | + | chr1_3:16864830-16864849 | None:intergenic | 45.0% | |
| !! | ATGATAATCTAGGGGGCGTT+TGG | + | chr1_3:16864870-16864889 | None:intergenic | 45.0% |
| ! | ATGTTGGGGGTGTGTATGTT+CGG | + | chr1_3:16865015-16865034 | None:intergenic | 45.0% |
| GTTCCCACTTCCCAATAGTA+AGG | - | chr1_3:16865065-16865084 | Msa0106970:intron | 45.0% | |
| GGTCCTTACTATTGGGAAGT+GGG | + | chr1_3:16865071-16865090 | None:intergenic | 45.0% | |
| TGGTCCTTACTATTGGGAAG+TGG | + | chr1_3:16865072-16865091 | None:intergenic | 45.0% | |
| ATGACACAAACTTACGCCCA+TGG | - | chr1_3:16866404-16866423 | Msa0106970:intron | 45.0% | |
| TTACGCCCATGGTCATATCT+TGG | - | chr1_3:16866415-16866434 | Msa0106970:intron | 45.0% | |
| GGGATTGCAAGCTTAAGAGT+TGG | - | chr1_3:16866569-16866588 | Msa0106970:intron | 45.0% | |
| TGCAAGCTTAAGAGTTGGAG+AGG | - | chr1_3:16866574-16866593 | Msa0106970:intron | 45.0% | |
| CCTTGCAACTTCTTAGGGTT+TGG | + | chr1_3:16866779-16866798 | None:intergenic | 45.0% | |
| CCAAACCCTAAGAAGTTGCA+AGG | - | chr1_3:16866776-16866795 | Msa0106970:intron | 45.0% | |
| CAGACACTGGAGAAACTTGT+AGG | - | chr1_3:16866950-16866969 | Msa0106970:intron | 45.0% | |
| !! | CCCTGAAGAGCATGCATTTT+TGG | + | chr1_3:16866982-16867001 | None:intergenic | 45.0% |
| !! | GAAGAGCATGCACTTTTGGA+AGG | + | chr1_3:16867174-16867193 | None:intergenic | 45.0% |
| ! | TCCAAAAGTGCATGCTCTTC+AGG | - | chr1_3:16867174-16867193 | Msa0106970:intron | 45.0% |
| ! | CCAAAAGTGCATGCTCTTCA+GGG | - | chr1_3:16867175-16867194 | Msa0106970:intron | 45.0% |
| ! | GAAGAGCTTGCACTTTTGGA+AGG | + | chr1_3:16867365-16867384 | None:intergenic | 45.0% |
| ! | CCATGAAGAGCTTGCACTTT+TGG | + | chr1_3:16867369-16867388 | None:intergenic | 45.0% |
| ! | CCAAAAGTGCAAGCTCTTCA+TGG | - | chr1_3:16867366-16867385 | Msa0106970:CDS | 45.0% |
| !! | GGAAGCATGCTCTTTTGGAA+GGG | + | chr1_3:16867560-16867579 | None:intergenic | 45.0% |
| TGAATTCCAAACACCCGGTA+GGG | - | chr1_3:16868956-16868975 | Msa0106970:CDS | 45.0% | |
| AATTTACCCTACCGGGTGTT+TGG | + | chr1_3:16868965-16868984 | None:intergenic | 45.0% | |
| !!! | AACTTTTATTTTTTTTAATT+TGG | - | chr1_3:16859861-16859880 | Msa0106970:intron | 5.0% |
| !!! | TATCATTTTATATTTATTTT+GGG | + | chr1_3:16860106-16860125 | None:intergenic | 5.0% |
| !! | ATATAAATTTATTTAAGAAA+AGG | + | chr1_3:16862038-16862057 | None:intergenic | 5.0% |
| !!! | CTTTTAATTTTTAAATATAT+TGG | - | chr1_3:16865601-16865620 | Msa0106970:intron | 5.0% |
| !! | TTAAATAAATAAAGAAATTA+AGG | + | chr1_3:16867233-16867252 | None:intergenic | 5.0% |
| !!! | CTATTTAAAATTAATATTTA+AGG | + | chr1_3:16867801-16867820 | None:intergenic | 5.0% |
| GAGCTTGATTGCTCCCTTGA+TGG | + | chr1_3:16859599-16859618 | None:intergenic | 50.0% | |
| ! | CACCTTTGCTACCACCCTTT+TGG | + | chr1_3:16860074-16860093 | None:intergenic | 50.0% |
| GCTGTAACGGTGTTTCATCG+CGG | + | chr1_3:16860319-16860338 | None:intergenic | 50.0% | |
| GATAAGGATTGCGGTTGTCG+CGG | + | chr1_3:16860554-16860573 | None:intergenic | 50.0% | |
| ! | CCGTTACAGGTGTTGCGATA+AGG | + | chr1_3:16860570-16860589 | None:intergenic | 50.0% |
| CACCTGTAACGGTCGAAATC+GGG | - | chr1_3:16860578-16860597 | Msa0106970:intron | 50.0% | |
| TTCCCGATTTCGACCGTTAC+AGG | + | chr1_3:16860583-16860602 | None:intergenic | 50.0% | |
| TCAAGGTCACAGTCGCGTAT+AGG | + | chr1_3:16860608-16860627 | None:intergenic | 50.0% | |
| TACTTTGCAGGTAGGGACAG+TGG | - | chr1_3:16860777-16860796 | Msa0106970:intron | 50.0% | |
| CGTCCATGGCAGCAATATGT+TGG | - | chr1_3:16860902-16860921 | Msa0106970:intron | 50.0% | |
| AAGCTTGGTTGCTCCCTTGA+TGG | + | chr1_3:16861284-16861303 | None:intergenic | 50.0% | |
| GAGGTCCCTTCCTTATAACC+TGG | + | chr1_3:16861440-16861459 | None:intergenic | 50.0% | |
| AAGGAAGGGACCTCTTCTTG+TGG | - | chr1_3:16861446-16861465 | Msa0106970:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr1_3:16861774-16861793 | None:intergenic | 50.0% | |
| !! | TGTTCAGTGGCGGATCTTCA+TGG | - | chr1_3:16862204-16862223 | Msa0106970:intron | 50.0% |
| !! | GTTCAGTGGCGGATCTTCAT+GGG | - | chr1_3:16862205-16862224 | Msa0106970:intron | 50.0% |
| TTCAATTTCCGCTGCGACAC+AGG | + | chr1_3:16862294-16862313 | None:intergenic | 50.0% | |
| TGAAAATGGGGGGACGATCA+TGG | - | chr1_3:16862682-16862701 | Msa0106970:CDS | 50.0% | |
| CTCCCTACACCGTGTTTCAA+AGG | - | chr1_3:16863448-16863467 | Msa0106970:intron | 50.0% | |
| !! | CCCCTTTGAAACACGGTGTA+GGG | + | chr1_3:16863453-16863472 | None:intergenic | 50.0% |
| CCCTACACCGTGTTTCAAAG+GGG | - | chr1_3:16863450-16863469 | Msa0106970:intron | 50.0% | |
| !! | TCCCCTTTGAAACACGGTGT+AGG | + | chr1_3:16863454-16863473 | None:intergenic | 50.0% |
| ! | TAGTTGCGAGACAATGGGCT+AGG | + | chr1_3:16863728-16863747 | None:intergenic | 50.0% |
| GTTAGAACGTGGGGATCACA+TGG | - | chr1_3:16864617-16864636 | Msa0106970:intron | 50.0% | |
| TACGTGGGTTTCTCCTTTCC+TGG | - | chr1_3:16864671-16864690 | Msa0106970:intron | 50.0% | |
| ACGTGGGTTTCTCCTTTCCT+GGG | - | chr1_3:16864672-16864691 | Msa0106970:intron | 50.0% | |
| AGAGGACCCTGCTATGAAAG+TGG | - | chr1_3:16866592-16866611 | Msa0106970:intron | 50.0% | |
| ! | CTTAGGGTTTGGTCCCTTGT+TGG | + | chr1_3:16866768-16866787 | None:intergenic | 50.0% |
| !! | CCCTGAAGAGCATGCACTTT+TGG | + | chr1_3:16867178-16867197 | None:intergenic | 50.0% |
| !! | GGGAAGCATGCTCTTTTGGA+AGG | + | chr1_3:16867561-16867580 | None:intergenic | 50.0% |
| !! | CCATGGGAAGCATGCTCTTT+TGG | + | chr1_3:16867565-16867584 | None:intergenic | 50.0% |
| ! | CCAAAAGAGCATGCTTCCCA+TGG | - | chr1_3:16867562-16867581 | Msa0106970:intron | 50.0% |
| GTGAATTCCAAACACCCGGT+AGG | - | chr1_3:16868955-16868974 | Msa0106970:CDS | 50.0% | |
| ! | AAGGGTGGTAGCAAAGGTGC+TGG | - | chr1_3:16860075-16860094 | Msa0106970:intron | 55.0% |
| TTTGCAGGTAGGGACAGTGG+AGG | - | chr1_3:16860780-16860799 | Msa0106970:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr1_3:16861809-16861828 | Msa0106970:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr1_3:16861905-16861924 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr1_3:16861906-16861925 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1_3:16861910-16861929 | Msa0106970:CDS | 55.0% |
| ATTAGATCTGGGGGGAGCCA+TGG | + | chr1_3:16862233-16862252 | None:intergenic | 55.0% | |
| AAGTTGTGCCTGTGTCGCAG+CGG | - | chr1_3:16862283-16862302 | Msa0106970:intron | 55.0% | |
| ACACGGTGTAGGGAGATGTG+AGG | + | chr1_3:16863443-16863462 | None:intergenic | 55.0% | |
| !! | CTAGGGGGCGTTTGGTAGAA+AGG | + | chr1_3:16864862-16864881 | None:intergenic | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr1_3:16861763-16861782 | Msa0106970:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1_3:16861878-16861897 | Msa0106970:CDS | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1_3:16861911-16861930 | Msa0106970:CDS | 60.0% |
| GCGGATCTTCATGGGAGCCA+TGG | - | chr1_3:16862213-16862232 | Msa0106970:intron | 60.0% | |
| TCAACGGTTCGAGTCCTGCC+TGG | + | chr1_3:16862409-16862428 | None:intergenic | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1_3:16861880-16861899 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1_3:16861893-16861912 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1_3:16861894-16861913 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1_3:16861893-16861912 | Msa0106970:CDS | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1_3:16861894-16861913 | Msa0106970:CDS | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1_3:16861895-16861914 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_3:16861899-16861918 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_3:16861900-16861919 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 16859412 | 16869109 | 16859412 | ID=Msa0106970;Name=Msa0106970 |
| chr1_3 | mRNA | 16859412 | 16869109 | 16859412 | ID=Msa0106970-mRNA-1;Parent=Msa0106970;Name=Msa0106970-mRNA-1;_AED=0.26;_eAED=0.27;_QI=22|0.26|0.25|1|0.66|0.68|16|0|659 |
| chr1_3 | exon | 16859412 | 16859449 | 16859412 | ID=Msa0106970-mRNA-1:exon:6366;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16860938 | 16861036 | 16860938 | ID=Msa0106970-mRNA-1:exon:6365;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16861134 | 16861232 | 16861134 | ID=Msa0106970-mRNA-1:exon:6364;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16861325 | 16861423 | 16861325 | ID=Msa0106970-mRNA-1:exon:6363;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16861521 | 16861619 | 16861521 | ID=Msa0106970-mRNA-1:exon:6362;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16861724 | 16861951 | 16861724 | ID=Msa0106970-mRNA-1:exon:6361;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16862680 | 16862881 | 16862680 | ID=Msa0106970-mRNA-1:exon:6360;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16862993 | 16863088 | 16862993 | ID=Msa0106970-mRNA-1:exon:6359;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16865646 | 16865891 | 16865646 | ID=Msa0106970-mRNA-1:exon:6358;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16866397 | 16866404 | 16866397 | ID=Msa0106970-mRNA-1:exon:6357;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16866988 | 16867080 | 16866988 | ID=Msa0106970-mRNA-1:exon:6356;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16867198 | 16867306 | 16867198 | ID=Msa0106970-mRNA-1:exon:6355;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16867352 | 16867477 | 16867352 | ID=Msa0106970-mRNA-1:exon:6354;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16867598 | 16867734 | 16867598 | ID=Msa0106970-mRNA-1:exon:6353;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16868681 | 16868776 | 16868681 | ID=Msa0106970-mRNA-1:exon:6352;Parent=Msa0106970-mRNA-1 |
| chr1_3 | exon | 16868883 | 16869109 | 16868883 | ID=Msa0106970-mRNA-1:exon:6351;Parent=Msa0106970-mRNA-1 |
| chr1_3 | five_prime_UTR | 16869088 | 16869109 | 16869088 | ID=Msa0106970-mRNA-1:five_prime_utr;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16868883 | 16869087 | 16868883 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16868681 | 16868776 | 16868681 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16867598 | 16867734 | 16867598 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16867352 | 16867477 | 16867352 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16867198 | 16867306 | 16867198 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16866988 | 16867080 | 16866988 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16866397 | 16866404 | 16866397 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16865646 | 16865891 | 16865646 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16862993 | 16863088 | 16862993 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16862680 | 16862881 | 16862680 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16861724 | 16861951 | 16861724 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16861521 | 16861619 | 16861521 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16861325 | 16861423 | 16861325 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16861134 | 16861232 | 16861134 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16860938 | 16861036 | 16860938 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| chr1_3 | CDS | 16859412 | 16859449 | 16859412 | ID=Msa0106970-mRNA-1:cds;Parent=Msa0106970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
