Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107050 | A0A072U9K2 | 53.782 | 119 | 30 | 3 | 430 | 531 | 77 | 187 | 1.41e-18 | 100 |
| Msa0107050 | A0A072U9K2 | 68.487 | 476 | 92 | 8 | 1 | 429 | 2 | 466 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0107050 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107050 | MtrunA17_Chr6g0476171 | 64.664 | 283 | 35 | 4 | 168 | 429 | 3 | 241 | 7.76e-120 | 352 |
| Msa0107050 | MtrunA17_Chr1g0163101 | 60.209 | 191 | 35 | 4 | 1 | 170 | 1 | 171 | 4.59e-67 | 214 |
| Msa0107050 | MtrunA17_Chr1g0163101 | 68.269 | 104 | 28 | 2 | 431 | 534 | 77 | 175 | 9.39e-35 | 129 |
| Msa0107050 | MtrunA17_Chr1g0163141 | 65.359 | 153 | 39 | 2 | 32 | 170 | 18 | 170 | 9.78e-57 | 187 |
| Msa0107050 | MtrunA17_Chr1g0163141 | 46.207 | 145 | 55 | 4 | 409 | 532 | 30 | 172 | 1.95e-25 | 103 |
| Msa0107050 | MtrunA17_Chr1g0163131 | 38.629 | 321 | 130 | 9 | 5 | 278 | 6 | 306 | 2.98e-56 | 191 |
| Msa0107050 | MtrunA17_Chr1g0163131 | 67.000 | 100 | 29 | 2 | 430 | 529 | 77 | 172 | 3.81e-30 | 120 |
| Msa0107050 | MtrunA17_Chr1g0163131 | 45.455 | 77 | 40 | 1 | 357 | 433 | 232 | 306 | 9.77e-14 | 72.4 |
| Msa0107050 | MtrunA17_Chr6g0476181 | 62.252 | 151 | 40 | 2 | 32 | 170 | 9 | 154 | 2.12e-55 | 183 |
| Msa0107050 | MtrunA17_Chr6g0476181 | 53.333 | 120 | 31 | 3 | 430 | 532 | 45 | 156 | 4.43e-24 | 99.0 |
| Msa0107050 | MtrunA17_Chr1g0163181 | 31.304 | 460 | 234 | 17 | 15 | 428 | 1 | 424 | 2.79e-54 | 189 |
| Msa0107050 | MtrunA17_Chr1g0163261 | 38.141 | 312 | 117 | 11 | 17 | 284 | 9 | 288 | 6.77e-50 | 173 |
| Msa0107050 | MtrunA17_Chr1g0162161 | 56.954 | 151 | 36 | 2 | 32 | 170 | 11 | 144 | 1.61e-47 | 162 |
| Msa0107050 | MtrunA17_Chr1g0162161 | 64.762 | 105 | 34 | 2 | 430 | 534 | 47 | 148 | 3.52e-34 | 126 |
| Msa0107050 | MtrunA17_Chr1g0163201 | 30.973 | 452 | 167 | 20 | 32 | 428 | 26 | 387 | 2.15e-43 | 159 |
| Msa0107050 | MtrunA17_Chr1g0163081 | 52.980 | 151 | 37 | 3 | 32 | 170 | 13 | 141 | 3.59e-40 | 142 |
| Msa0107050 | MtrunA17_Chr1g0163081 | 65.049 | 103 | 28 | 4 | 430 | 532 | 49 | 143 | 2.28e-29 | 113 |
| Msa0107050 | MtrunA17_Chr1g0163161 | 53.741 | 147 | 37 | 4 | 37 | 170 | 1 | 129 | 3.60e-40 | 142 |
| Msa0107050 | MtrunA17_Chr1g0163161 | 61.111 | 126 | 43 | 3 | 409 | 531 | 8 | 130 | 1.29e-36 | 132 |
| Msa0107050 | MtrunA17_Chr1g0163231 | 35.714 | 308 | 118 | 11 | 17 | 280 | 9 | 280 | 9.14e-40 | 146 |
| Msa0107050 | MtrunA17_Chr1g0163251 | 34.713 | 314 | 130 | 13 | 26 | 295 | 14 | 296 | 2.46e-39 | 147 |
| Msa0107050 | MtrunA17_Chr1g0163121 | 47.682 | 151 | 39 | 3 | 32 | 170 | 18 | 140 | 3.36e-34 | 126 |
| Msa0107050 | MtrunA17_Chr1g0163121 | 64.706 | 102 | 22 | 3 | 430 | 531 | 54 | 141 | 1.21e-28 | 110 |
| Msa0107050 | MtrunA17_Chr1g0171611 | 33.446 | 296 | 129 | 9 | 17 | 280 | 9 | 268 | 1.36e-33 | 129 |
| Msa0107050 | MtrunA17_Chr1g0163111 | 32.669 | 251 | 109 | 10 | 199 | 428 | 12 | 223 | 3.20e-31 | 120 |
| Msa0107050 | MtrunA17_Chr1g0163151 | 31.746 | 252 | 100 | 8 | 199 | 428 | 15 | 216 | 4.16e-27 | 109 |
| Msa0107050 | MtrunA17_Chr1g0163091 | 43.919 | 148 | 55 | 5 | 177 | 303 | 3 | 143 | 2.54e-24 | 99.4 |
| Msa0107050 | MtrunA17_Chr1g0162151 | 29.682 | 283 | 93 | 9 | 177 | 432 | 3 | 206 | 8.94e-22 | 94.0 |
| Msa0107050 | MtrunA17_Chr1g0208771 | 23.799 | 458 | 262 | 18 | 36 | 429 | 24 | 458 | 4.52e-20 | 93.2 |
| Msa0107050 | MtrunA17_Chr8g0390841 | 23.469 | 490 | 285 | 21 | 15 | 428 | 37 | 512 | 1.17e-19 | 92.0 |
| Msa0107050 | MtrunA17_Chr4g0067431 | 25.526 | 333 | 177 | 15 | 12 | 291 | 10 | 324 | 2.24e-18 | 86.3 |
| Msa0107050 | MtrunA17_Chr1g0163071 | 25.890 | 309 | 160 | 12 | 33 | 291 | 10 | 299 | 6.31e-17 | 81.6 |
| Msa0107050 | MtrunA17_Chr1g0163241 | 35.772 | 123 | 58 | 5 | 32 | 140 | 30 | 145 | 2.66e-15 | 73.9 |
| Msa0107050 | MtrunA17_Chr3g0103181 | 23.934 | 305 | 172 | 12 | 7 | 278 | 2 | 279 | 2.19e-14 | 73.6 |
| Msa0107050 | MtrunA17_Chr7g0233561 | 24.847 | 326 | 169 | 15 | 10 | 281 | 11 | 314 | 2.50e-13 | 71.2 |
| Msa0107050 | MtrunA17_Chr1g0163191 | 37.037 | 108 | 42 | 4 | 26 | 107 | 14 | 121 | 4.80e-13 | 67.0 |
| Msa0107050 | MtrunA17_Chr1g0163221 | 24.375 | 320 | 188 | 13 | 11 | 294 | 5 | 306 | 6.33e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 85 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATATGTGGGCAATTT+TGG | 0.142869 | 1_3:+16998378 | Msa0107050:CDS |
| AGAGAATGATTACTAGTTCT+TGG | 0.263261 | 1_3:-16995774 | None:intergenic |
| GGGCATGGTTCCTTTGTGGC+TGG | 0.290615 | 1_3:-16998122 | None:intergenic |
| CAGACCCATTTGGAAGTCTA+AGG | 0.299120 | 1_3:-16996700 | None:intergenic |
| TTGAATTTGTCATGTAAATT+CGG | 0.311912 | 1_3:-16998547 | None:intergenic |
| CACATATTCCATATCTTCTT+CGG | 0.325520 | 1_3:-16998367 | None:intergenic |
| AAAAGACATAATATATTTAG+TGG | 0.334344 | 1_3:+16998705 | Msa0107050:CDS |
| TTCCTTTGTGGCTGGGATAA+TGG | 0.345212 | 1_3:-16998114 | None:intergenic |
| GGTCTGAGTTCAAAATGAAT+TGG | 0.350012 | 1_3:+16996717 | Msa0107050:CDS |
| TATAATGAACATCTCGACTA+TGG | 0.355043 | 1_3:+16998780 | Msa0107050:CDS |
| CTCTGGGCATGGTTCCTTTG+TGG | 0.384680 | 1_3:-16998126 | None:intergenic |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 1_3:-16996820 | None:intergenic |
| GACAATGCCCGAAGAAGATA+TGG | 0.389565 | 1_3:+16998359 | Msa0107050:CDS |
| TAATATATTTAGTGGAAATT+CGG | 0.396970 | 1_3:+16998713 | Msa0107050:CDS |
| GGCATGGTTCCTTTGTGGCT+GGG | 0.402651 | 1_3:-16998121 | None:intergenic |
| TACGATATTTGTTAGAGTCT+TGG | 0.405191 | 1_3:-17003632 | Msa0107060:intron |
| TTAATACCTTGAAACTGCTC+TGG | 0.427580 | 1_3:-16998143 | None:intergenic |
| ATGATGTTTGGCTTCAGAAT+TGG | 0.437267 | 1_3:+16996753 | Msa0107050:CDS |
| GCCTTAAAACACAAGGTCTC+AGG | 0.437600 | 1_3:+16998421 | Msa0107050:CDS |
| GCAATATCATTCAGAATCTC+AGG | 0.441061 | 1_3:-17003687 | Msa0107060:intron |
| CTAGTTCTTGGTCTTGAAGC+TGG | 0.445722 | 1_3:-16995762 | None:intergenic |
| GTCTGAGTTCAAAATGAATT+GGG | 0.455385 | 1_3:+16996718 | Msa0107050:CDS |
| GAATTTACATGACAAATTCA+AGG | 0.456040 | 1_3:+16998549 | Msa0107050:CDS |
| TTGAAGCTGGCGAAGTTGAA+TGG | 0.463192 | 1_3:-16995749 | None:intergenic |
| TACAACGAGGTGATGATGTT+TGG | 0.463515 | 1_3:+16996741 | Msa0107050:CDS |
| AAGGAACATGACTTGAAAGT+TGG | 0.470859 | 1_3:+16998038 | Msa0107050:CDS |
| ATTCGGTGGAGTTGAAAGTA+GGG | 0.471281 | 1_3:+16998730 | Msa0107050:CDS |
| ACATATTCCATATCTTCTTC+GGG | 0.475083 | 1_3:-16998366 | None:intergenic |
| CGAAGAAGATATGGAATATG+TGG | 0.478018 | 1_3:+16998368 | Msa0107050:CDS |
| TTAGAAGTGTTGATGAGGAC+AGG | 0.485676 | 1_3:+16997940 | Msa0107050:CDS |
| TTTGGAAGTCTAAGGGATGT+TGG | 0.490503 | 1_3:-16996692 | None:intergenic |
| AGTGAAACTAGGATTCTCAT+TGG | 0.490637 | 1_3:-16997433 | None:intergenic |
| TCAATGTCAAGTGTTCACTA+TGG | 0.491973 | 1_3:+16995688 | Msa0107050:exon |
| TGAAAGTAGGGGAAGGAACA+TGG | 0.498346 | 1_3:+16998742 | Msa0107050:CDS |
| AATTCGGTGGAGTTGAAAGT+AGG | 0.502201 | 1_3:+16998729 | Msa0107050:CDS |
| TTGTCAATGTTTGTCCCTTG+AGG | 0.507957 | 1_3:-16997052 | None:intergenic |
| AAGGAAATTCGTAGAGACAT+TGG | 0.511665 | 1_3:+16996654 | Msa0107050:intron |
| AGAGATTGCAAAGTAAAGAC+TGG | 0.513081 | 1_3:+16998834 | Msa0107050:CDS |
| ACATCCCTTAGACTTCCAAA+TGG | 0.515725 | 1_3:+16996695 | Msa0107050:CDS |
| CCATGCCCAGAGCAGTTTCA+AGG | 0.516067 | 1_3:+16998137 | Msa0107050:CDS |
| ATGGCCTTCAACATGAGATC+GGG | 0.518094 | 1_3:-16997466 | None:intergenic |
| GCTGGCGAAGTTGAATGGTT+TGG | 0.518589 | 1_3:-16995744 | None:intergenic |
| TGGACGTGGGAGTGAAGCTA+AGG | 0.519368 | 1_3:+16995708 | Msa0107050:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1_3:+16998884 | Msa0107050:CDS |
| ACTGTTGCTGCTACACCTCA+AGG | 0.523151 | 1_3:+16997037 | Msa0107050:CDS |
| ATGGTAATTGTGAATGAAAG+TGG | 0.526717 | 1_3:-16998095 | None:intergenic |
| GTGAAACTAGGATTCTCATT+GGG | 0.534567 | 1_3:-16997432 | None:intergenic |
| GACTATGGATGGTTCACTAA+AGG | 0.536976 | 1_3:+16998795 | Msa0107050:CDS |
| CCTTGAAACTGCTCTGGGCA+TGG | 0.538312 | 1_3:-16998137 | None:intergenic |
| TATGGCCTTCAACATGAGAT+CGG | 0.541774 | 1_3:-16997467 | None:intergenic |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1_3:+16997906 | Msa0107050:CDS |
| TATATTTAGTGGAAATTCGG+TGG | 0.544355 | 1_3:+16998716 | Msa0107050:CDS |
| CAATGATGAACAAGAAGCTA+AGG | 0.548779 | 1_3:+16996901 | Msa0107050:CDS |
| CATCCCTTAGACTTCCAAAT+GGG | 0.555762 | 1_3:+16996696 | Msa0107050:CDS |
| TATTCGTTTGAAAACCATGT+AGG | 0.557476 | 1_3:-16997885 | None:intergenic |
| ATGGATGGTTCACTAAAGGC+TGG | 0.558556 | 1_3:+16998799 | Msa0107050:CDS |
| TTTGGCTTCAGAATTGGAAG+AGG | 0.559399 | 1_3:+16996759 | Msa0107050:CDS |
| GATAATTTGAGAGTGAAACT+AGG | 0.566910 | 1_3:-16997444 | None:intergenic |
| ATGAACATCTCGACTATGGA+TGG | 0.566956 | 1_3:+16998784 | Msa0107050:CDS |
| TCAAGTGTTCACTATGGACG+TGG | 0.567496 | 1_3:+16995694 | Msa0107050:CDS |
| TAATACCTTGAAACTGCTCT+GGG | 0.569622 | 1_3:-16998142 | None:intergenic |
| TGAAACAGAGGCTACCTACA+TGG | 0.580260 | 1_3:+16997871 | Msa0107050:intron |
| AACAATTAGAAGTGTTGATG+AGG | 0.583313 | 1_3:+16997935 | Msa0107050:CDS |
| TTTGCGCGCTCTCTCAGATG+TGG | 0.586381 | 1_3:+16996782 | Msa0107050:CDS |
| AGACCCATTTGGAAGTCTAA+GGG | 0.608527 | 1_3:-16996699 | None:intergenic |
| AATAGAGACAGAGGAGGCCG+CGG | 0.610798 | 1_3:+16997345 | Msa0107050:intron |
| GCAGAGGCTAATAGAGACAG+AGG | 0.621169 | 1_3:+16997336 | Msa0107050:intron |
| TGTGTTGAGGTTCTGAATGA+CGG | 0.625237 | 1_3:+16996959 | Msa0107050:CDS |
| CAATGATTATGATTGTGTTG+AGG | 0.625578 | 1_3:+16996946 | Msa0107050:CDS |
| GGAAGGAACATGGTTTGTAG+AGG | 0.629163 | 1_3:+16998752 | Msa0107050:CDS |
| GAAGAAGATATGGAATATGT+GGG | 0.632888 | 1_3:+16998369 | Msa0107050:CDS |
| TTCGGTGGAGTTGAAAGTAG+GGG | 0.634551 | 1_3:+16998731 | Msa0107050:CDS |
| GGACGTGGGAGTGAAGCTAA+GGG | 0.640577 | 1_3:+16995709 | Msa0107050:CDS |
| CTGTTGCTGCTACACCTCAA+GGG | 0.643334 | 1_3:+16997038 | Msa0107050:CDS |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1_3:+16997911 | Msa0107050:CDS |
| GTGGAGTTGAAAGTAGGGGA+AGG | 0.644645 | 1_3:+16998735 | Msa0107050:CDS |
| TAGAAGTGTTGATGAGGACA+GGG | 0.646868 | 1_3:+16997941 | Msa0107050:CDS |
| ATTTCTTAGCTTTCTTACCG+CGG | 0.652512 | 1_3:-16997362 | None:intergenic |
| TACCATTATCCCAGCCACAA+AGG | 0.660933 | 1_3:+16998112 | Msa0107050:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1_3:+16997907 | Msa0107050:CDS |
| AACAGCTGCCTTAAAACACA+AGG | 0.666453 | 1_3:+16998414 | Msa0107050:CDS |
| GTGTTGATGAGGACAGGGCA+CGG | 0.684939 | 1_3:+16997946 | Msa0107050:CDS |
| CAAGTGTTCACTATGGACGT+GGG | 0.700697 | 1_3:+16995695 | Msa0107050:CDS |
| GAGGCTAATAGAGACAGAGG+AGG | 0.708768 | 1_3:+16997339 | Msa0107050:intron |
| AAAATGAATTGGGTACAACG+AGG | 0.756191 | 1_3:+16996728 | Msa0107050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAAAATAAA+GGG | + | chr1_3:16999427-16999446 | Msa0107050:intron | 0.0% |
| !! | ATGAAATTTATTATCATTAA+TGG | + | chr1_3:16996042-16996061 | Msa0107050:intron | 10.0% |
| !! | TTAAATCATAATAAATAAGT+AGG | - | chr1_3:17001417-17001436 | None:intergenic | 10.0% |
| !!! | TTGTTGTTATTATTATTATT+TGG | + | chr1_3:17002136-17002155 | Msa0107050:intron | 10.0% |
| !!! | GTGTTTTTATTTAAATTTAT+GGG | + | chr1_3:17002370-17002389 | Msa0107050:intron | 10.0% |
| !!! | TTTTTGTTAATAAAAAATTG+AGG | + | chr1_3:17002544-17002563 | Msa0107050:intron | 10.0% |
| !! | TTATTTAATAATGAAAAACA+AGG | - | chr1_3:17003178-17003197 | None:intergenic | 10.0% |
| !!! | TTTTTATTATTGAATTATGT+TGG | + | chr1_3:17003217-17003236 | Msa0107050:intron | 10.0% |
| !!! | AAATATTATTTTAGATACAA+TGG | + | chr1_3:17003442-17003461 | Msa0107050:intron | 10.0% |
| !!! | AATATTATTTTAGATACAAT+GGG | + | chr1_3:17003443-17003462 | Msa0107050:intron | 10.0% |
| !! | TTATTATCATTAATGGAATT+TGG | + | chr1_3:16996049-16996068 | Msa0107050:intron | 15.0% |
| !! | AATTCATGAAATTAAATTCA+TGG | + | chr1_3:16996306-16996325 | Msa0107050:intron | 15.0% |
| !! | AGAAAAAACATAAATAAAGT+GGG | - | chr1_3:16997209-16997228 | None:intergenic | 15.0% |
| !! | AAGAAAAAACATAAATAAAG+TGG | - | chr1_3:16997210-16997229 | None:intergenic | 15.0% |
| !! | CTTGAAAAATAAAATTAAGA+TGG | - | chr1_3:16998452-16998471 | None:intergenic | 15.0% |
| !! | AAAAGACATAATATATTTAG+TGG | + | chr1_3:16998705-16998724 | Msa0107050:CDS | 15.0% |
| !! | TAATATATTTAGTGGAAATT+CGG | + | chr1_3:16998713-16998732 | Msa0107050:CDS | 15.0% |
| !! | TTAACATATTTATGAATATC+AGG | + | chr1_3:16999590-16999609 | Msa0107050:intron | 15.0% |
| !!! | TTTTTTTTATTGTTGTTGTT+GGG | - | chr1_3:16999737-16999756 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATTGTTGTTGT+TGG | - | chr1_3:16999738-16999757 | None:intergenic | 15.0% |
| !!! | ATATTCCATTTTTACATAAT+GGG | - | chr1_3:17000227-17000246 | None:intergenic | 15.0% |
| !!! | TCAAATTTTGTTGATATATA+AGG | - | chr1_3:17000646-17000665 | None:intergenic | 15.0% |
| !!! | TTAAATTTTTAGAACTTCAT+TGG | - | chr1_3:17000687-17000706 | None:intergenic | 15.0% |
| !!! | AATTGAGATAATAGTTATTT+TGG | - | chr1_3:17001571-17001590 | None:intergenic | 15.0% |
| !! | ATAAGAAATTCTATTCAAAA+TGG | - | chr1_3:17001972-17001991 | None:intergenic | 15.0% |
| !! | ATAAATAAGATAAAAAACCA+TGG | - | chr1_3:17002175-17002194 | None:intergenic | 15.0% |
| !! | AAATCATTTATCTCTTTAAA+TGG | + | chr1_3:17002239-17002258 | Msa0107050:intron | 15.0% |
| !!! | GGTGTTTTTATTTAAATTTA+TGG | + | chr1_3:17002369-17002388 | Msa0107050:intron | 15.0% |
| !! | AATAAGATAAAAGATTTGAA+CGG | + | chr1_3:17002651-17002670 | Msa0107050:intron | 15.0% |
| !!! | TTATGACTAATTTTTTGATA+TGG | + | chr1_3:17003058-17003077 | Msa0107050:intron | 15.0% |
| !!! | TATGACTAATTTTTTGATAT+GGG | + | chr1_3:17003059-17003078 | Msa0107050:intron | 15.0% |
| !!! | TTAATTTTGTAGAGAAATAT+TGG | + | chr1_3:17003367-17003386 | Msa0107050:intron | 15.0% |
| !!! | CTAAAATAATATTTTGAACT+CGG | - | chr1_3:17003436-17003455 | None:intergenic | 15.0% |
| !!! | ATATTATTTTAGATACAATG+GGG | + | chr1_3:17003444-17003463 | Msa0107050:intron | 15.0% |
| !! | ATCAAAAGAATGAATGAAAA+CGG | - | chr1_3:16995818-16995837 | None:intergenic | 20.0% |
| !!! | TCCTTTTGAATTATCATAAA+TGG | + | chr1_3:16995983-16996002 | Msa0107050:intron | 20.0% |
| !! | TCCATTTATGATAATTCAAA+AGG | - | chr1_3:16995987-16996006 | None:intergenic | 20.0% |
| !! | TTGATTGTTAGAAACTAAAA+CGG | + | chr1_3:16996534-16996553 | Msa0107050:intron | 20.0% |
| !!! | AGATTTTCATGTCATTATAT+TGG | + | chr1_3:16996838-16996857 | Msa0107050:intron | 20.0% |
| !! | AAAAAGAAAATCAACTCAAA+TGG | + | chr1_3:16997007-16997026 | Msa0107050:CDS | 20.0% |
| !! | TAAAAACATGTACATTTGTA+TGG | - | chr1_3:16997178-16997197 | None:intergenic | 20.0% |
| !! | AGTTTGATACATTTAAATAC+TGG | + | chr1_3:16997776-16997795 | Msa0107050:intron | 20.0% |
| !! | TTGAATTTGTCATGTAAATT+CGG | - | chr1_3:16998550-16998569 | None:intergenic | 20.0% |
| !! | TTTCTTTCATTTAAACCAAT+GGG | - | chr1_3:16999023-16999042 | None:intergenic | 20.0% |
| !! | AAGTTGAAGAAAAAGAATAT+AGG | + | chr1_3:16999066-16999085 | Msa0107050:intron | 20.0% |
| !!! | ACAATTCTAAGATGATAAAT+TGG | - | chr1_3:17000112-17000131 | None:intergenic | 20.0% |
| !!! | CATATTCCATTTTTACATAA+TGG | - | chr1_3:17000228-17000247 | None:intergenic | 20.0% |
| !! | CATTATGTAAAAATGGAATA+TGG | + | chr1_3:17000226-17000245 | Msa0107050:intron | 20.0% |
| !!! | TAGTATTGTCATTTCAAATA+TGG | - | chr1_3:17000364-17000383 | None:intergenic | 20.0% |
| !!! | GTTTCTTTTTTTGTTTTTCA+AGG | + | chr1_3:17000965-17000984 | Msa0107050:intron | 20.0% |
| !! | AAATAGGAGTAATTCTTATA+TGG | - | chr1_3:17001184-17001203 | None:intergenic | 20.0% |
| !! | CAAAATGGAAAAAAATGAAT+AGG | - | chr1_3:17001957-17001976 | None:intergenic | 20.0% |
| !! | TTAATTAAAAAACATTGACG+AGG | + | chr1_3:17002286-17002305 | Msa0107050:intron | 20.0% |
| !! | GTTAATAAAAAATTGAGGAA+AGG | + | chr1_3:17002549-17002568 | Msa0107050:intron | 20.0% |
| !!! | TTAGTGTCAAAATTTTTAAG+TGG | - | chr1_3:17003272-17003291 | None:intergenic | 20.0% |
| !!! | TTTGGAATTTTTAGAGATAT+TGG | - | chr1_3:17003408-17003427 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTCAACATAAAAG+AGG | + | chr1_3:17003528-17003547 | Msa0107050:CDS | 20.0% |
| !!! | TAGTTTTTCAACATAAAAGA+GGG | + | chr1_3:17003529-17003548 | Msa0107050:CDS | 20.0% |
| ! | GCTGTAAATAATGAATGAAA+AGG | - | chr1_3:16995916-16995935 | None:intergenic | 25.0% |
| ! | TCATGAAATTAAATTCATGG+AGG | + | chr1_3:16996309-16996328 | Msa0107050:intron | 25.0% |
| ! | TTTGTGAAATCTGAACTAAT+TGG | - | chr1_3:16996389-16996408 | None:intergenic | 25.0% |
| ! | CGTTACTAATTGAAATTCAT+TGG | + | chr1_3:16996602-16996621 | Msa0107050:intron | 25.0% |
| ! | TATATTGGATGATAGTAGTT+TGG | + | chr1_3:16996853-16996872 | Msa0107050:intron | 25.0% |
| !! | TTGATTTTCTTTTTCTTGAG+GGG | - | chr1_3:16997001-16997020 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCTTTTTCTTGA+GGG | - | chr1_3:16997002-16997021 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTCTTTTTCTTG+AGG | - | chr1_3:16997003-16997022 | None:intergenic | 25.0% |
| !! | CATTTGTATGGATTAAAAAG+TGG | - | chr1_3:16997166-16997185 | None:intergenic | 25.0% |
| !!! | AAATGTACATGTTTTTAGTC+CGG | + | chr1_3:16997181-16997200 | Msa0107050:intron | 25.0% |
| ! | AAATGCACAAAAACTAAACA+TGG | + | chr1_3:16997381-16997400 | Msa0107050:CDS | 25.0% |
| ! | AATGCACAAAAACTAAACAT+GGG | + | chr1_3:16997382-16997401 | Msa0107050:CDS | 25.0% |
| !! | ATCATGGGAAAAAAAAGTAT+AGG | - | chr1_3:16997506-16997525 | None:intergenic | 25.0% |
| !! | AGAGACTTTCATTTTACTAT+AGG | + | chr1_3:16997551-16997570 | Msa0107050:intron | 25.0% |
| ! | TATTCACAAGAGAAACATTT+GGG | - | chr1_3:16997607-16997626 | None:intergenic | 25.0% |
| ! | ACTAACAGAAAACATATTCA+AGG | + | chr1_3:16997645-16997664 | Msa0107050:intron | 25.0% |
| !! | TTGATTTTCAAATGTGTCTT+TGG | - | chr1_3:16997718-16997737 | None:intergenic | 25.0% |
| ! | TTAACTATATGTAATGTGCA+TGG | - | chr1_3:16997812-16997831 | None:intergenic | 25.0% |
| ! | AGTAGTATGTTTACATTACA+TGG | - | chr1_3:16998273-16998292 | None:intergenic | 25.0% |
| ! | AGAACAAAGAAAACAGTTTA+AGG | - | chr1_3:16998504-16998523 | None:intergenic | 25.0% |
| ! | GAATTTACATGACAAATTCA+AGG | + | chr1_3:16998549-16998568 | Msa0107050:CDS | 25.0% |
| !! | TTTTGTAACATCATTAGACA+AGG | + | chr1_3:16998573-16998592 | Msa0107050:CDS | 25.0% |
| ! | TTTGTTCTTATATATGCAGT+TGG | + | chr1_3:16998659-16998678 | Msa0107050:intron | 25.0% |
| ! | TTATGTTAAACCCCTTAAAA+TGG | - | chr1_3:16998947-16998966 | None:intergenic | 25.0% |
| ! | CTTTCTTTCATTTAAACCAA+TGG | - | chr1_3:16999024-16999043 | None:intergenic | 25.0% |
| !!! | CATTGGTTTAAATGAAAGAA+AGG | + | chr1_3:16999022-16999041 | Msa0107050:intron | 25.0% |
| ! | GTTTAAATGAAAGAAAGGTT+CGG | + | chr1_3:16999027-16999046 | Msa0107050:intron | 25.0% |
| ! | AAGAATATAGGAAAATCAGA+AGG | + | chr1_3:16999078-16999097 | Msa0107050:intron | 25.0% |
| ! | GTTGAAGAATCTTTGATTAA+AGG | - | chr1_3:16999162-16999181 | None:intergenic | 25.0% |
| ! | TTACTTTACTGTTAATGTTG+TGG | - | chr1_3:16999184-16999203 | None:intergenic | 25.0% |
| !!! | ATTCTCAAACACTATTTTAG+AGG | - | chr1_3:16999226-16999245 | None:intergenic | 25.0% |
| ! | TAGTGTTAAAATAGCTACTA+TGG | + | chr1_3:16999324-16999343 | Msa0107050:intron | 25.0% |
| ! | TTAAAATAGCTACTATGGAA+TGG | + | chr1_3:16999329-16999348 | Msa0107050:intron | 25.0% |
| ! | AGAGAAAGAATCTTGAAAAA+AGG | - | chr1_3:16999377-16999396 | None:intergenic | 25.0% |
| !!! | AGTAGTTTTCAATTTTTCAG+AGG | - | chr1_3:16999497-16999516 | None:intergenic | 25.0% |
| ! | ATCAAGGTTTCAATGTTAAA+TGG | - | chr1_3:16999818-16999837 | None:intergenic | 25.0% |
| ! | TTTAACATTGAAACCTTGAT+TGG | + | chr1_3:16999818-16999837 | Msa0107050:intron | 25.0% |
| ! | ATGTGGATATCATATTAACT+TGG | + | chr1_3:17000049-17000068 | Msa0107050:intron | 25.0% |
| !! | CTAGTCTTCTATATTTATAG+AGG | + | chr1_3:17000190-17000209 | Msa0107050:intron | 25.0% |
| ! | TAGTCTATTTGAATTTGAAG+TGG | + | chr1_3:17000724-17000743 | Msa0107050:intron | 25.0% |
| ! | GGATTTATCTTTGTTAATGT+TGG | + | chr1_3:17000986-17001005 | Msa0107050:intron | 25.0% |
| !! | AAAATCATGCTAGTTTAATC+TGG | + | chr1_3:17001252-17001271 | Msa0107050:intron | 25.0% |
| !! | AAATCATGCTAGTTTAATCT+GGG | + | chr1_3:17001253-17001272 | Msa0107050:intron | 25.0% |
| ! | TCATAATAAATAAGTAGGAC+TGG | - | chr1_3:17001412-17001431 | None:intergenic | 25.0% |
| !!! | AGATAATAGTTATTTTGGAC+TGG | - | chr1_3:17001566-17001585 | None:intergenic | 25.0% |
| !!! | AGATTTTTTAATGTAGTCGA+TGG | - | chr1_3:17001600-17001619 | None:intergenic | 25.0% |
| ! | GTACAAAATGAATAAAGAAG+TGG | + | chr1_3:17001774-17001793 | Msa0107050:intron | 25.0% |
| !! | ATGTAGTTACTTTCATTTGT+TGG | - | chr1_3:17002024-17002043 | None:intergenic | 25.0% |
| !! | AAAAAGTATAAAAGACTCGA+CGG | - | chr1_3:17002208-17002227 | None:intergenic | 25.0% |
| !! | TGATTTAAGACACTAAAACT+TGG | + | chr1_3:17002348-17002367 | Msa0107050:intron | 25.0% |
| !!! | AATTTTCAAGAAACAGTGTT+GGG | - | chr1_3:17002932-17002951 | None:intergenic | 25.0% |
| ! | TAGATTTAAAGACTTACTGT+TGG | + | chr1_3:17003017-17003036 | Msa0107050:intron | 25.0% |
| ! | GTATTGTTTAGACTAAAATG+TGG | + | chr1_3:17003112-17003131 | Msa0107050:intron | 25.0% |
| ! | AAAACAAATGAGTTCGAAAT+TGG | - | chr1_3:17003348-17003367 | None:intergenic | 25.0% |
| ! | TTTGTAGAGAAATATTGGAA+AGG | + | chr1_3:17003372-17003391 | Msa0107050:intron | 25.0% |
| ! | TGAATTAGAAAAAGTTTGCA+TGG | + | chr1_3:17003484-17003503 | Msa0107050:intron | 25.0% |
| ! | AGAGAATGATTACTAGTTCT+TGG | - | chr1_3:16995777-16995796 | None:intergenic | 30.0% |
| AGAATGAATGAAAACGGAAA+AGG | - | chr1_3:16995812-16995831 | None:intergenic | 30.0% | |
| CATATGCTTGACTTAAAATG+TGG | + | chr1_3:16996469-16996488 | Msa0107050:intron | 30.0% | |
| GTCTGAGTTCAAAATGAATT+GGG | + | chr1_3:16996718-16996737 | Msa0107050:CDS | 30.0% | |
| ! | CTTGTAGTTTTCCAATACAA+AGG | + | chr1_3:16996809-16996828 | Msa0107050:CDS | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | + | chr1_3:16996813-16996832 | Msa0107050:CDS | 30.0% |
| CAATGATTATGATTGTGTTG+AGG | + | chr1_3:16996946-16996965 | Msa0107050:CDS | 30.0% | |
| !!! | AATGTACATGTTTTTAGTCC+GGG | + | chr1_3:16997182-16997201 | Msa0107050:intron | 30.0% |
| !!! | ATAGTTTTAACGTTTTGCAG+AGG | + | chr1_3:16997320-16997339 | Msa0107050:intron | 30.0% |
| GATAATTTGAGAGTGAAACT+AGG | - | chr1_3:16997447-16997466 | None:intergenic | 30.0% | |
| ATAGGAAACATACCAATCTA+TGG | - | chr1_3:16997488-16997507 | None:intergenic | 30.0% | |
| GGTACAAAAATCACTATCAT+GGG | - | chr1_3:16997521-16997540 | None:intergenic | 30.0% | |
| AGGTACAAAAATCACTATCA+TGG | - | chr1_3:16997522-16997541 | None:intergenic | 30.0% | |
| ATTCACAAGAGAAACATTTG+GGG | - | chr1_3:16997606-16997625 | None:intergenic | 30.0% | |
| CTATTCACAAGAGAAACATT+TGG | - | chr1_3:16997608-16997627 | None:intergenic | 30.0% | |
| AGCTAACAATAGAGACATTT+AGG | + | chr1_3:16997741-16997760 | Msa0107050:intron | 30.0% | |
| TATTCGTTTGAAAACCATGT+AGG | - | chr1_3:16997888-16997907 | None:intergenic | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | + | chr1_3:16997906-16997925 | Msa0107050:CDS | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | + | chr1_3:16997907-16997926 | Msa0107050:CDS | 30.0% | |
| !! | AACAATTAGAAGTGTTGATG+AGG | + | chr1_3:16997935-16997954 | Msa0107050:CDS | 30.0% |
| !!! | CAATGACAGTTTTTTAATGC+AGG | + | chr1_3:16997995-16998014 | Msa0107050:intron | 30.0% |
| ATGGTAATTGTGAATGAAAG+TGG | - | chr1_3:16998098-16998117 | None:intergenic | 30.0% | |
| !! | CTGATTTTATTTGCACTTGT+TGG | - | chr1_3:16998338-16998357 | None:intergenic | 30.0% |
| ACATATTCCATATCTTCTTC+GGG | - | chr1_3:16998369-16998388 | None:intergenic | 30.0% | |
| CACATATTCCATATCTTCTT+CGG | - | chr1_3:16998370-16998389 | None:intergenic | 30.0% | |
| GAAGAAGATATGGAATATGT+GGG | + | chr1_3:16998369-16998388 | Msa0107050:CDS | 30.0% | |
| TATATTTAGTGGAAATTCGG+TGG | + | chr1_3:16998716-16998735 | Msa0107050:CDS | 30.0% | |
| TATAATGAACATCTCGACTA+TGG | + | chr1_3:16998780-16998799 | Msa0107050:CDS | 30.0% | |
| TATTCTCTAATTGTGAGACT+CGG | + | chr1_3:16998975-16998994 | Msa0107050:intron | 30.0% | |
| !! | GATTTTCTTAACCTTTAGGA+AGG | - | chr1_3:16999464-16999483 | None:intergenic | 30.0% |
| TCCTAAAGGTTAAGAAAATC+AGG | + | chr1_3:16999464-16999483 | Msa0107050:intron | 30.0% | |
| TTATGAATATCAGGTCAACA+TGG | + | chr1_3:16999599-16999618 | Msa0107050:intron | 30.0% | |
| !!! | TTGCTTCTGTGATTTTAACT+AGG | - | chr1_3:16999701-16999720 | None:intergenic | 30.0% |
| !! | AAAAGTATCAGCATGATGTA+TGG | + | chr1_3:16999776-16999795 | Msa0107050:intron | 30.0% |
| ATATCGTATGGAACAAAGAA+TGG | + | chr1_3:16999958-16999977 | Msa0107050:intron | 30.0% | |
| ! | ATCATATTAACTTGGCAAGA+TGG | + | chr1_3:17000057-17000076 | Msa0107050:intron | 30.0% |
| TAGAGCCCATTATGTAAAAA+TGG | + | chr1_3:17000219-17000238 | Msa0107050:intron | 30.0% | |
| ! | AACCAAATATTCTGAAAGCT+TGG | + | chr1_3:17000313-17000332 | Msa0107050:intron | 30.0% |
| TGATTGGCATTTACAATACA+AGG | - | chr1_3:17000390-17000409 | None:intergenic | 30.0% | |
| TGTATTGTAAATGCCAATCA+TGG | + | chr1_3:17000390-17000409 | Msa0107050:intron | 30.0% | |
| TGCATTCTAATTACCATGAT+TGG | - | chr1_3:17000406-17000425 | None:intergenic | 30.0% | |
| TCATGGTAATTAGAATGCAT+AGG | + | chr1_3:17000407-17000426 | Msa0107050:intron | 30.0% | |
| AATGCATAGGACACATATAT+TGG | + | chr1_3:17000420-17000439 | Msa0107050:intron | 30.0% | |
| AAAAGTTATACCACATCAGA+TGG | - | chr1_3:17000514-17000533 | None:intergenic | 30.0% | |
| ! | GTGGTATAACTTTTCTAATC+AGG | + | chr1_3:17000520-17000539 | Msa0107050:intron | 30.0% |
| AAAATGAATCACGACGTAAT+GGG | + | chr1_3:17000760-17000779 | Msa0107050:intron | 30.0% | |
| GAAACAGAAAAGAGAAAAGA+TGG | - | chr1_3:17000950-17000969 | None:intergenic | 30.0% | |
| TTGAATGTGACCAAATACAA+TGG | + | chr1_3:17001145-17001164 | Msa0107050:intron | 30.0% | |
| CATGTTAGTCCTTCAATATA+TGG | + | chr1_3:17001382-17001401 | Msa0107050:intron | 30.0% | |
| TTGATAGAAATACATTCCCT+TGG | - | chr1_3:17001870-17001889 | None:intergenic | 30.0% | |
| TGAAAGTAACTACATCTACA+TGG | + | chr1_3:17002029-17002048 | Msa0107050:intron | 30.0% | |
| !!! | CATTGTTATTTTTCCTCACA+GGG | - | chr1_3:17002059-17002078 | None:intergenic | 30.0% |
| !!! | TCATTGTTATTTTTCCTCAC+AGG | - | chr1_3:17002060-17002079 | None:intergenic | 30.0% |
| CTAATCACGCATGATTATTA+GGG | + | chr1_3:17002309-17002328 | Msa0107050:intron | 30.0% | |
| ! | GTTTGATGAAATGATGATGA+TGG | + | chr1_3:17002392-17002411 | Msa0107050:intron | 30.0% |
| !! | ATTTTCAAGAAACAGTGTTG+GGG | - | chr1_3:17002931-17002950 | None:intergenic | 30.0% |
| !! | GAATTTTCAAGAAACAGTGT+TGG | - | chr1_3:17002933-17002952 | None:intergenic | 30.0% |
| TTTCTTGAAAATTCCACTAC+CGG | + | chr1_3:17002939-17002958 | Msa0107050:intron | 30.0% | |
| TAGAGAGAACCAAAAAACAT+TGG | - | chr1_3:17003089-17003108 | None:intergenic | 30.0% | |
| ! | TACGATATTTGTTAGAGTCT+TGG | - | chr1_3:17003635-17003654 | Msa0107060:intron | 30.0% |
| ! | GTGTCAATATTTGTCTTTTG+AGG | - | chr1_3:17003729-17003748 | Msa0107060:intron | 30.0% |
| ! | TTTGCCTATGACTTTTTGTT+GGG | - | chr1_3:17003775-17003794 | Msa0107060:intron | 30.0% |
| ! | ATTTGCCTATGACTTTTTGT+TGG | - | chr1_3:17003776-17003795 | Msa0107060:intron | 30.0% |
| TCAATGTCAAGTGTTCACTA+TGG | + | chr1_3:16995688-16995707 | Msa0107050:exon | 35.0% | |
| !! | CTCTTTAAGTGGACTGTTTA+AGG | + | chr1_3:16996146-16996165 | Msa0107050:intron | 35.0% |
| CATCACGAAAACTGTATTGA+GGG | - | chr1_3:16996198-16996217 | None:intergenic | 35.0% | |
| AATGTCTCTACGAATTTCCT+TGG | - | chr1_3:16996655-16996674 | None:intergenic | 35.0% | |
| AAGGAAATTCGTAGAGACAT+TGG | + | chr1_3:16996654-16996673 | Msa0107050:intron | 35.0% | |
| ! | ATTTTGAACTCAGACCCATT+TGG | - | chr1_3:16996713-16996732 | None:intergenic | 35.0% |
| GGTCTGAGTTCAAAATGAAT+TGG | + | chr1_3:16996717-16996736 | Msa0107050:CDS | 35.0% | |
| AAAATGAATTGGGTACAACG+AGG | + | chr1_3:16996728-16996747 | Msa0107050:CDS | 35.0% | |
| ! | ATGATGTTTGGCTTCAGAAT+TGG | + | chr1_3:16996753-16996772 | Msa0107050:CDS | 35.0% |
| ! | GTAGTTTTCCAATACAAAGG+AGG | + | chr1_3:16996812-16996831 | Msa0107050:CDS | 35.0% |
| CAATGATGAACAAGAAGCTA+AGG | + | chr1_3:16996901-16996920 | Msa0107050:CDS | 35.0% | |
| !!! | CTTGCCTGAAATTTTTTGCA+GGG | - | chr1_3:16997101-16997120 | None:intergenic | 35.0% |
| !!! | ACTTGCCTGAAATTTTTTGC+AGG | - | chr1_3:16997102-16997121 | None:intergenic | 35.0% |
| AACATAAATAAAGTGGGTCC+CGG | - | chr1_3:16997203-16997222 | None:intergenic | 35.0% | |
| ! | ATTTCTTAGCTTTCTTACCG+CGG | - | chr1_3:16997365-16997384 | None:intergenic | 35.0% |
| GTGAAACTAGGATTCTCATT+GGG | - | chr1_3:16997435-16997454 | None:intergenic | 35.0% | |
| AGTGAAACTAGGATTCTCAT+TGG | - | chr1_3:16997436-16997455 | None:intergenic | 35.0% | |
| TTCACAAGAGAAACATTTGG+GGG | - | chr1_3:16997605-16997624 | None:intergenic | 35.0% | |
| TAAATCATGACCTGAAACAG+AGG | + | chr1_3:16997859-16997878 | Msa0107050:intron | 35.0% | |
| !!! | GACAGTTTTTTAATGCAGGT+TGG | + | chr1_3:16997999-16998018 | Msa0107050:intron | 35.0% |
| !!! | GTTTTTTAATGCAGGTTGGT+TGG | + | chr1_3:16998003-16998022 | Msa0107050:intron | 35.0% |
| !! | TGGTTGGAAGTCATTTTCAA+AGG | + | chr1_3:16998019-16998038 | Msa0107050:CDS | 35.0% |
| AAGGAACATGACTTGAAAGT+TGG | + | chr1_3:16998038-16998057 | Msa0107050:CDS | 35.0% | |
| TAATACCTTGAAACTGCTCT+GGG | - | chr1_3:16998145-16998164 | None:intergenic | 35.0% | |
| TTAATACCTTGAAACTGCTC+TGG | - | chr1_3:16998146-16998165 | None:intergenic | 35.0% | |
| CGAAGAAGATATGGAATATG+TGG | + | chr1_3:16998368-16998387 | Msa0107050:CDS | 35.0% | |
| ! | ATGGAATATGTGGGCAATTT+TGG | + | chr1_3:16998378-16998397 | Msa0107050:CDS | 35.0% |
| ! | TGTCTTTTTAACAGCTCACT+TGG | - | chr1_3:16998693-16998712 | None:intergenic | 35.0% |
| AGAGATTGCAAAGTAAAGAC+TGG | + | chr1_3:16998834-16998853 | Msa0107050:CDS | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | + | chr1_3:16998884-16998903 | Msa0107050:CDS | 35.0% | |
| !!! | CTTGTGTCTTGCCATTTTAA+GGG | + | chr1_3:16998933-16998952 | Msa0107050:intron | 35.0% |
| !!! | TTGTGTCTTGCCATTTTAAG+GGG | + | chr1_3:16998934-16998953 | Msa0107050:intron | 35.0% |
| TTTCTGCACTGAATCATCTT+AGG | - | chr1_3:16999260-16999279 | None:intergenic | 35.0% | |
| AGAATCTTGAAAAAAGGACG+TGG | - | chr1_3:16999371-16999390 | None:intergenic | 35.0% | |
| ! | GCCTGATTTTCTTAACCTTT+AGG | - | chr1_3:16999468-16999487 | None:intergenic | 35.0% |
| TTTAGTACTCTAGCTGTTAG+TGG | - | chr1_3:16999563-16999582 | None:intergenic | 35.0% | |
| !!! | AGTGGCAATTTTTTACTGCA+AGG | - | chr1_3:16999628-16999647 | None:intergenic | 35.0% |
| ! | ATTGTGTTTTCAGCTCAAAG+TGG | - | chr1_3:16999646-16999665 | None:intergenic | 35.0% |
| TGCTTAAGAATCTCCAATCA+AGG | - | chr1_3:16999834-16999853 | None:intergenic | 35.0% | |
| TTGAAAGAGCTACCTTATAC+AGG | + | chr1_3:16999899-16999918 | Msa0107050:intron | 35.0% | |
| TGGAACAAAGAATGGTTACT+TGG | + | chr1_3:16999966-16999985 | Msa0107050:intron | 35.0% | |
| AACAAAGAATGGTTACTTGG+AGG | + | chr1_3:16999969-16999988 | Msa0107050:intron | 35.0% | |
| AAAGACTGAAGTGAGATTTG+TGG | + | chr1_3:17000025-17000044 | Msa0107050:intron | 35.0% | |
| GACTAGACATGAAGAATTGT+AGG | - | chr1_3:17000176-17000195 | None:intergenic | 35.0% | |
| AGCCAAGCTTTCAGAATATT+TGG | - | chr1_3:17000318-17000337 | None:intergenic | 35.0% | |
| TTCCTCTTACTAACATGTTG+TGG | - | chr1_3:17000573-17000592 | None:intergenic | 35.0% | |
| GAAAATGAATCACGACGTAA+TGG | + | chr1_3:17000759-17000778 | Msa0107050:intron | 35.0% | |
| TAACACGACGATAGAGAAAA+CGG | - | chr1_3:17000894-17000913 | None:intergenic | 35.0% | |
| TGTGACCAAATACAATGGTT+TGG | + | chr1_3:17001150-17001169 | Msa0107050:intron | 35.0% | |
| CAAGACCAAACCATTGTATT+TGG | - | chr1_3:17001158-17001177 | None:intergenic | 35.0% | |
| !! | AATACAATGGTTTGGTCTTG+TGG | + | chr1_3:17001158-17001177 | Msa0107050:intron | 35.0% |
| ! | ATGGAAGGGACATCTAAAAT+AGG | - | chr1_3:17001200-17001219 | None:intergenic | 35.0% |
| ACTGGTATGCCATATATTGA+AGG | - | chr1_3:17001394-17001413 | None:intergenic | 35.0% | |
| TAAATACACAGCCTAGCTAA+CGG | + | chr1_3:17001632-17001651 | Msa0107050:intron | 35.0% | |
| TCTCACATCAGAAAGAACAT+AGG | - | chr1_3:17001699-17001718 | None:intergenic | 35.0% | |
| GAGCTTGTATTAGTGCTAAT+AGG | - | chr1_3:17002002-17002021 | None:intergenic | 35.0% | |
| TTGGCAAAATTAGTACTCCA+TGG | + | chr1_3:17002155-17002174 | Msa0107050:intron | 35.0% | |
| GCTAATCACGCATGATTATT+AGG | + | chr1_3:17002308-17002327 | Msa0107050:intron | 35.0% | |
| TGATCTATCTAATCACATGC+TGG | - | chr1_3:17002974-17002993 | None:intergenic | 35.0% | |
| !!! | ATGGGAATGCCAATGTTTTT+TGG | + | chr1_3:17003077-17003096 | Msa0107050:intron | 35.0% |
| ! | ATTTTGAACTCGGACTCATT+TGG | - | chr1_3:17003426-17003445 | None:intergenic | 35.0% |
| GCAATATCATTCAGAATCTC+AGG | - | chr1_3:17003690-17003709 | Msa0107060:intron | 35.0% | |
| ATCACTTGGACTCAATCACT+TGG | + | chr1_3:16996114-16996133 | Msa0107050:intron | 40.0% | |
| GGTCATAGGAACTCTTTAAG+TGG | + | chr1_3:16996135-16996154 | Msa0107050:intron | 40.0% | |
| CCATCACGAAAACTGTATTG+AGG | - | chr1_3:16996199-16996218 | None:intergenic | 40.0% | |
| ! | CCTCAATACAGTTTTCGTGA+TGG | + | chr1_3:16996196-16996215 | Msa0107050:intron | 40.0% |
| GTGCAAGAATAGAGCAAGAA+TGG | - | chr1_3:16996244-16996263 | None:intergenic | 40.0% | |
| TCATGTATTAGTGCTACGCA+TGG | + | chr1_3:16996417-16996436 | Msa0107050:intron | 40.0% | |
| TGTTCTTGCAGATGATTCCA+AGG | + | chr1_3:16996635-16996654 | Msa0107050:intron | 40.0% | |
| TTTGGAAGTCTAAGGGATGT+TGG | - | chr1_3:16996695-16996714 | None:intergenic | 40.0% | |
| ACATCCCTTAGACTTCCAAA+TGG | + | chr1_3:16996695-16996714 | Msa0107050:CDS | 40.0% | |
| CATCCCTTAGACTTCCAAAT+GGG | + | chr1_3:16996696-16996715 | Msa0107050:CDS | 40.0% | |
| AGACCCATTTGGAAGTCTAA+GGG | - | chr1_3:16996702-16996721 | None:intergenic | 40.0% | |
| ! | TACAACGAGGTGATGATGTT+TGG | + | chr1_3:16996741-16996760 | Msa0107050:CDS | 40.0% |
| ! | TTTGGCTTCAGAATTGGAAG+AGG | + | chr1_3:16996759-16996778 | Msa0107050:CDS | 40.0% |
| AATCTGACCCTCCTTTGTAT+TGG | - | chr1_3:16996823-16996842 | None:intergenic | 40.0% | |
| !! | TGTGTTGAGGTTCTGAATGA+CGG | + | chr1_3:16996959-16996978 | Msa0107050:CDS | 40.0% |
| TTGTCAATGTTTGTCCCTTG+AGG | - | chr1_3:16997055-16997074 | None:intergenic | 40.0% | |
| GCAACCCTGCAAAAAATTTC+AGG | + | chr1_3:16997094-16997113 | Msa0107050:CDS | 40.0% | |
| TTATCCCGATCTCATGTTGA+AGG | + | chr1_3:16997462-16997481 | Msa0107050:intron | 40.0% | |
| TATGGCCTTCAACATGAGAT+CGG | - | chr1_3:16997470-16997489 | None:intergenic | 40.0% | |
| TCATGTTGAAGGCCATAGAT+TGG | + | chr1_3:16997473-16997492 | Msa0107050:intron | 40.0% | |
| TGAAAGTCTCTCACACAGTT+AGG | - | chr1_3:16997542-16997561 | None:intergenic | 40.0% | |
| AAGAGAAACATTTGGGGGTT+TGG | - | chr1_3:16997600-16997619 | None:intergenic | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | + | chr1_3:16997911-16997930 | Msa0107050:CDS | 40.0% | |
| !! | TTAGAAGTGTTGATGAGGAC+AGG | + | chr1_3:16997940-16997959 | Msa0107050:CDS | 40.0% |
| !! | TAGAAGTGTTGATGAGGACA+GGG | + | chr1_3:16997941-16997960 | Msa0107050:CDS | 40.0% |
| AACAGCTGCCTTAAAACACA+AGG | + | chr1_3:16998414-16998433 | Msa0107050:CDS | 40.0% | |
| ! | TCCTGAGACCTTGTGTTTTA+AGG | - | chr1_3:16998425-16998444 | None:intergenic | 40.0% |
| ! | AATTCGGTGGAGTTGAAAGT+AGG | + | chr1_3:16998729-16998748 | Msa0107050:CDS | 40.0% |
| ! | ATTCGGTGGAGTTGAAAGTA+GGG | + | chr1_3:16998730-16998749 | Msa0107050:CDS | 40.0% |
| ATGAACATCTCGACTATGGA+TGG | + | chr1_3:16998784-16998803 | Msa0107050:CDS | 40.0% | |
| GACTATGGATGGTTCACTAA+AGG | + | chr1_3:16998795-16998814 | Msa0107050:CDS | 40.0% | |
| !!! | GCTTGTGTCTTGCCATTTTA+AGG | + | chr1_3:16998932-16998951 | Msa0107050:intron | 40.0% |
| TCTTGATGAACCTTGAGGAT+TGG | - | chr1_3:16999121-16999140 | None:intergenic | 40.0% | |
| CAATGTCTTGATGAACCTTG+AGG | - | chr1_3:16999126-16999145 | None:intergenic | 40.0% | |
| CATCAAGACATTGTCTTCCT+CGG | + | chr1_3:16999133-16999152 | Msa0107050:intron | 40.0% | |
| TCAACACAGATCCTTCCTAA+AGG | + | chr1_3:16999450-16999469 | Msa0107050:intron | 40.0% | |
| GAAGTGAGATTTGTGGTATG+TGG | + | chr1_3:17000032-17000051 | Msa0107050:intron | 40.0% | |
| ATCAGGTCGAAATGTCACAT+AGG | + | chr1_3:17000537-17000556 | Msa0107050:intron | 40.0% | |
| ! | GAATTTGAAGTGGAGTTGCT+CGG | + | chr1_3:17000734-17000753 | Msa0107050:intron | 40.0% |
| CACCATCATCACTATTGTTG+CGG | + | chr1_3:17000836-17000855 | Msa0107050:intron | 40.0% | |
| ! | GATGTTGATTACAGCGTCAA+TGG | - | chr1_3:17000862-17000881 | None:intergenic | 40.0% |
| ! | GTTTTCTCTATCGTCGTGTT+AGG | + | chr1_3:17000893-17000912 | Msa0107050:intron | 40.0% |
| ATGGAATCCAATAACGCTTC+GGG | - | chr1_3:17000931-17000950 | None:intergenic | 40.0% | |
| GATGGAATCCAATAACGCTT+CGG | - | chr1_3:17000932-17000951 | None:intergenic | 40.0% | |
| ATCACCTTTGCCTTAGAGTA+GGG | - | chr1_3:17001228-17001247 | None:intergenic | 40.0% | |
| TGAGAATAATGCCGTTAGCT+AGG | - | chr1_3:17001646-17001665 | None:intergenic | 40.0% | |
| TTCAACACCATTCTTCACCA+TGG | + | chr1_3:17001830-17001849 | Msa0107050:intron | 40.0% | |
| TCAACACCATTCTTCACCAT+GGG | + | chr1_3:17001831-17001850 | Msa0107050:intron | 40.0% | |
| !!! | GTTATTTTTCCTCACAGGGT+TGG | - | chr1_3:17002055-17002074 | None:intergenic | 40.0% |
| GCAACCCAACAAAAAGTCAT+AGG | + | chr1_3:17003768-17003787 | Msa0107050:CDS | 40.0% | |
| TCAAGTGTTCACTATGGACG+TGG | + | chr1_3:16995694-16995713 | Msa0107050:CDS | 45.0% | |
| CAAGTGTTCACTATGGACGT+GGG | + | chr1_3:16995695-16995714 | Msa0107050:CDS | 45.0% | |
| TTGAAGCTGGCGAAGTTGAA+TGG | - | chr1_3:16995752-16995771 | None:intergenic | 45.0% | |
| !! | CTAGTTCTTGGTCTTGAAGC+TGG | - | chr1_3:16995765-16995784 | None:intergenic | 45.0% |
| !! | GCAGGTTAGCTTACATGACA+GGG | - | chr1_3:16995944-16995963 | None:intergenic | 45.0% |
| !! | AGCAGGTTAGCTTACATGAC+AGG | - | chr1_3:16995945-16995964 | None:intergenic | 45.0% |
| GGTGGAACTCATTGATCACT+TGG | + | chr1_3:16996100-16996119 | Msa0107050:intron | 45.0% | |
| GGACTCAATCACTTGGTCAT+AGG | + | chr1_3:16996121-16996140 | Msa0107050:intron | 45.0% | |
| ATTAGTGCTACGCATGGCTT+TGG | + | chr1_3:16996423-16996442 | Msa0107050:intron | 45.0% | |
| CAGACCCATTTGGAAGTCTA+AGG | - | chr1_3:16996703-16996722 | None:intergenic | 45.0% | |
| ! | CTTTTTCTTGAGGGGTTGTC+TGG | - | chr1_3:16996993-16997012 | None:intergenic | 45.0% |
| ATGGCCTTCAACATGAGATC+GGG | - | chr1_3:16997469-16997488 | None:intergenic | 45.0% | |
| ATGTAGGTAGCCTCTGTTTC+AGG | - | chr1_3:16997872-16997891 | None:intergenic | 45.0% | |
| TGAAACAGAGGCTACCTACA+TGG | + | chr1_3:16997871-16997890 | Msa0107050:intron | 45.0% | |
| TACCATTATCCCAGCCACAA+AGG | + | chr1_3:16998112-16998131 | Msa0107050:CDS | 45.0% | |
| TTCCTTTGTGGCTGGGATAA+TGG | - | chr1_3:16998117-16998136 | None:intergenic | 45.0% | |
| GACAATGCCCGAAGAAGATA+TGG | + | chr1_3:16998359-16998378 | Msa0107050:CDS | 45.0% | |
| GCCTTAAAACACAAGGTCTC+AGG | + | chr1_3:16998421-16998440 | Msa0107050:CDS | 45.0% | |
| TTCGGTGGAGTTGAAAGTAG+GGG | + | chr1_3:16998731-16998750 | Msa0107050:CDS | 45.0% | |
| TGAAAGTAGGGGAAGGAACA+TGG | + | chr1_3:16998742-16998761 | Msa0107050:CDS | 45.0% | |
| ! | GGAAGGAACATGGTTTGTAG+AGG | + | chr1_3:16998752-16998771 | Msa0107050:CDS | 45.0% |
| ATGGATGGTTCACTAAAGGC+TGG | + | chr1_3:16998799-16998818 | Msa0107050:CDS | 45.0% | |
| TGCAACTGTGTTCTTCCCAT+TGG | + | chr1_3:16999005-16999024 | Msa0107050:intron | 45.0% | |
| AAATCAGAAGGCAGTCCAAC+AGG | + | chr1_3:16999090-16999109 | Msa0107050:intron | 45.0% | |
| TGATGAACCTTGAGGATTGG+AGG | - | chr1_3:16999118-16999137 | None:intergenic | 45.0% | |
| TCTTTGATTAAAGGCGACCG+AGG | - | chr1_3:16999153-16999172 | None:intergenic | 45.0% | |
| GGCATGATCAGCATATCGTA+TGG | + | chr1_3:16999946-16999965 | Msa0107050:intron | 45.0% | |
| ! | TTCTGAAAGCTTGGCTGCAA+TGG | + | chr1_3:17000322-17000341 | Msa0107050:intron | 45.0% |
| GTCGATTACTCCATCTGATG+TGG | + | chr1_3:17000501-17000520 | Msa0107050:intron | 45.0% | |
| AGGTCGAAATGTCACATAGG+CGG | + | chr1_3:17000540-17000559 | Msa0107050:intron | 45.0% | |
| AATGTCACATAGGCGGTTAG+TGG | + | chr1_3:17000547-17000566 | Msa0107050:intron | 45.0% | |
| GGCCACAACATGTTAGTAAG+AGG | + | chr1_3:17000568-17000587 | Msa0107050:intron | 45.0% | |
| !! | AATCACGACGTAATGGGTGT+GGG | + | chr1_3:17000766-17000785 | Msa0107050:intron | 45.0% |
| TGGTGACAGTGACAACAATG+TGG | - | chr1_3:17000821-17000840 | None:intergenic | 45.0% | |
| TCTCTATCGTCGTGTTAGGT+AGG | + | chr1_3:17000897-17000916 | Msa0107050:intron | 45.0% | |
| TCTCTCTCTCTCTCTCTCTA+GGG | + | chr1_3:17001109-17001128 | Msa0107050:intron | 45.0% | |
| TCACCTTTGCCTTAGAGTAG+GGG | - | chr1_3:17001227-17001246 | None:intergenic | 45.0% | |
| CATCACCTTTGCCTTAGAGT+AGG | - | chr1_3:17001229-17001248 | None:intergenic | 45.0% | |
| TTGCAGCTGACGAAGTTGAA+TGG | - | chr1_3:17001894-17001913 | None:intergenic | 45.0% | |
| TGAGTGTGCTTACAAGCTCT+TGG | - | chr1_3:17001919-17001938 | None:intergenic | 45.0% | |
| !!! | TATTAATTTCATTATTATTT+TGG | + | chr1_3:16998160-16998179 | Msa0107050:intron | 5.0% |
| !! | CAAAAAATAAATAAAAATAA+AGG | + | chr1_3:16999426-16999445 | Msa0107050:intron | 5.0% |
| !! | TAAAAATTTAAAAGTAAAAA+TGG | + | chr1_3:17000696-17000715 | Msa0107050:intron | 5.0% |
| GCTGGCGAAGTTGAATGGTT+TGG | - | chr1_3:16995747-16995766 | None:intergenic | 50.0% | |
| AAGGAAAACCCTGACAGAGC+TGG | - | chr1_3:16995968-16995987 | None:intergenic | 50.0% | |
| CTCGCGAGCGATTCATCATT+TGG | + | chr1_3:16996079-16996098 | Msa0107050:intron | 50.0% | |
| GCGAGCGATTCATCATTTGG+TGG | + | chr1_3:16996082-16996101 | Msa0107050:intron | 50.0% | |
| ACTGTTGCTGCTACACCTCA+AGG | + | chr1_3:16997037-16997056 | Msa0107050:CDS | 50.0% | |
| CTGTTGCTGCTACACCTCAA+GGG | + | chr1_3:16997038-16997057 | Msa0107050:CDS | 50.0% | |
| GCAGAGGCTAATAGAGACAG+AGG | + | chr1_3:16997336-16997355 | Msa0107050:intron | 50.0% | |
| GAGGCTAATAGAGACAGAGG+AGG | + | chr1_3:16997339-16997358 | Msa0107050:intron | 50.0% | |
| !! | TCTGCTTTTGATCCCCGACA+AGG | + | chr1_3:16998294-16998313 | Msa0107050:intron | 50.0% |
| GTGGAGTTGAAAGTAGGGGA+AGG | + | chr1_3:16998735-16998754 | Msa0107050:CDS | 50.0% | |
| !! | TGAGGATTGGAGGTACCTGT+TGG | - | chr1_3:16999108-16999127 | None:intergenic | 50.0% |
| ACAGGTACCTCCAATCCTCA+AGG | + | chr1_3:16999108-16999127 | Msa0107050:intron | 50.0% | |
| ACCTTATACAGGAAGCCCCA+AGG | + | chr1_3:16999910-16999929 | Msa0107050:intron | 50.0% | |
| TCCTTGGGGCTTCCTGTATA+AGG | - | chr1_3:16999914-16999933 | None:intergenic | 50.0% | |
| CCCTCTGATTGTCTTCCTTG+GGG | - | chr1_3:16999928-16999947 | None:intergenic | 50.0% | |
| CCCCAAGGAAGACAATCAGA+GGG | + | chr1_3:16999925-16999944 | Msa0107050:intron | 50.0% | |
| GCCCTCTGATTGTCTTCCTT+GGG | - | chr1_3:16999929-16999948 | None:intergenic | 50.0% | |
| TGCCCTCTGATTGTCTTCCT+TGG | - | chr1_3:16999930-16999949 | None:intergenic | 50.0% | |
| !! | GAATCACGACGTAATGGGTG+TGG | + | chr1_3:17000765-17000784 | Msa0107050:intron | 50.0% |
| GGCCGCAACAATAGTGATGA+TGG | - | chr1_3:17000841-17000860 | None:intergenic | 50.0% | |
| CACGACGATAGAGAAAACGG+CGG | - | chr1_3:17000891-17000910 | None:intergenic | 50.0% | |
| ATCGTCGTGTTAGGTAGGTG+TGG | + | chr1_3:17000902-17000921 | Msa0107050:intron | 50.0% | |
| GAATCCAATAACGCTTCGGG+TGG | - | chr1_3:17000928-17000947 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCT+AGG | + | chr1_3:17001012-17001031 | Msa0107050:intron | 50.0% | |
| AGAGTAGGGGTGACATGGAA+GGG | - | chr1_3:17001214-17001233 | None:intergenic | 50.0% | |
| TAGAGTAGGGGTGACATGGA+AGG | - | chr1_3:17001215-17001234 | None:intergenic | 50.0% | |
| TCCATGTCACCCCTACTCTA+AGG | + | chr1_3:17001215-17001234 | Msa0107050:intron | 50.0% | |
| !! | TCACCCCTACTCTAAGGCAA+AGG | + | chr1_3:17001221-17001240 | Msa0107050:intron | 50.0% |
| ACCATTCTTCACCATGGGTG+TGG | + | chr1_3:17001836-17001855 | Msa0107050:intron | 50.0% | |
| CCATTCTTCACCATGGGTGT+GGG | + | chr1_3:17001837-17001856 | Msa0107050:intron | 50.0% | |
| CACATGCTGGATGTTGACAC+CGG | - | chr1_3:17002961-17002980 | None:intergenic | 50.0% | |
| TGGACGTGGGAGTGAAGCTA+AGG | + | chr1_3:16995708-16995727 | Msa0107050:CDS | 55.0% | |
| GGACGTGGGAGTGAAGCTAA+GGG | + | chr1_3:16995709-16995728 | Msa0107050:CDS | 55.0% | |
| TAACCTGCTCCAGCTCTGTC+AGG | + | chr1_3:16995956-16995975 | Msa0107050:intron | 55.0% | |
| AACCTGCTCCAGCTCTGTCA+GGG | + | chr1_3:16995957-16995976 | Msa0107050:intron | 55.0% | |
| TTTGCGCGCTCTCTCAGATG+TGG | + | chr1_3:16996782-16996801 | Msa0107050:CDS | 55.0% | |
| AATAGAGACAGAGGAGGCCG+CGG | + | chr1_3:16997345-16997364 | Msa0107050:intron | 55.0% | |
| ! | GTGTTGATGAGGACAGGGCA+CGG | + | chr1_3:16997946-16997965 | Msa0107050:CDS | 55.0% |
| GGCATGGTTCCTTTGTGGCT+GGG | - | chr1_3:16998124-16998143 | None:intergenic | 55.0% | |
| CTCTGGGCATGGTTCCTTTG+TGG | - | chr1_3:16998129-16998148 | None:intergenic | 55.0% | |
| ! | CCTTGAAACTGCTCTGGGCA+TGG | - | chr1_3:16998140-16998159 | None:intergenic | 55.0% |
| CCATGCCCAGAGCAGTTTCA+AGG | + | chr1_3:16998137-16998156 | Msa0107050:CDS | 55.0% | |
| TGCATGTCGACGACCTTGTC+GGG | - | chr1_3:16998310-16998329 | None:intergenic | 55.0% | |
| CTGCATGTCGACGACCTTGT+CGG | - | chr1_3:16998311-16998330 | None:intergenic | 55.0% | |
| GCCCCAAGGAAGACAATCAG+AGG | + | chr1_3:16999924-16999943 | Msa0107050:intron | 55.0% | |
| GCCTTAGAGTAGGGGTGACA+TGG | - | chr1_3:17001219-17001238 | None:intergenic | 55.0% | |
| CCCACACCCATGGTGAAGAA+TGG | - | chr1_3:17001840-17001859 | None:intergenic | 55.0% | |
| TCTACATGGCCAACCCTGTG+AGG | + | chr1_3:17002043-17002062 | Msa0107050:intron | 55.0% | |
| CTGGATGTTGACACCGGTAG+TGG | - | chr1_3:17002955-17002974 | None:intergenic | 55.0% | |
| AACCCTGACAGAGCTGGAGC+AGG | - | chr1_3:16995962-16995981 | None:intergenic | 60.0% | |
| GGGCATGGTTCCTTTGTGGC+TGG | - | chr1_3:16998125-16998144 | None:intergenic | 60.0% | |
| GCATGTCGACGACCTTGTCG+GGG | - | chr1_3:16998309-16998328 | None:intergenic | 60.0% | |
| ! | GTGGCCACCCGAAGCGTTAT+TGG | + | chr1_3:17000921-17000940 | Msa0107050:intron | 60.0% |
| CTTCACCATGGGTGTGGGAG+TGG | + | chr1_3:17001842-17001861 | Msa0107050:intron | 60.0% | |
| TGGCTCCACTCCCACACCCA+TGG | - | chr1_3:17001850-17001869 | None:intergenic | 65.0% | |
| TGGGTGTGGGAGTGGAGCCA+AGG | + | chr1_3:17001850-17001869 | Msa0107050:intron | 65.0% | |
| GGGTGTGGGAGTGGAGCCAA+GGG | + | chr1_3:17001851-17001870 | Msa0107050:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 16995675 | 17003806 | 16995675 | ID=Msa0107050;Name=Msa0107050 |
| chr1_3 | mRNA | 16995675 | 17003806 | 16995675 | ID=Msa0107050-mRNA-1;Parent=Msa0107050;Name=Msa0107050-mRNA-1;_AED=0.21;_eAED=0.21;_QI=16|0|0|1|0.22|0.1|10|0|534 |
| chr1_3 | exon | 16995675 | 16995783 | 16995675 | ID=Msa0107050-mRNA-1:exon:6426;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16996668 | 16996834 | 16996668 | ID=Msa0107050-mRNA-1:exon:6427;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16996871 | 16997119 | 16996871 | ID=Msa0107050-mRNA-1:exon:6428;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16997350 | 16997476 | 16997350 | ID=Msa0107050-mRNA-1:exon:6429;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16997879 | 16997971 | 16997879 | ID=Msa0107050-mRNA-1:exon:6430;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16998017 | 16998158 | 16998017 | ID=Msa0107050-mRNA-1:exon:6431;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16998316 | 16998444 | 16998316 | ID=Msa0107050-mRNA-1:exon:6432;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16998536 | 16998594 | 16998536 | ID=Msa0107050-mRNA-1:exon:6433;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 16998678 | 16998905 | 16998678 | ID=Msa0107050-mRNA-1:exon:6434;Parent=Msa0107050-mRNA-1 |
| chr1_3 | exon | 17003492 | 17003806 | 17003492 | ID=Msa0107050-mRNA-1:exon:6435;Parent=Msa0107050-mRNA-1 |
| chr1_3 | five_prime_UTR | 16995675 | 16995690 | 16995675 | ID=Msa0107050-mRNA-1:five_prime_utr;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16995691 | 16995783 | 16995691 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16996668 | 16996834 | 16996668 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16996871 | 16997119 | 16996871 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16997350 | 16997476 | 16997350 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16997879 | 16997971 | 16997879 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16998017 | 16998158 | 16998017 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16998316 | 16998444 | 16998316 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16998536 | 16998594 | 16998536 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 16998678 | 16998905 | 16998678 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| chr1_3 | CDS | 17003492 | 17003806 | 17003492 | ID=Msa0107050-mRNA-1:cds;Parent=Msa0107050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
