Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107160 | A0A072U9K2 | 57.798 | 109 | 23 | 2 | 430 | 521 | 77 | 179 | 9.09e-21 | 106 |
| Msa0107160 | A0A072U9K2 | 68.277 | 476 | 93 | 9 | 1 | 429 | 2 | 466 | 0.0 | 626 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0107160 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0107160 | MtrunA17_Chr6g0476171 | 64.311 | 283 | 36 | 4 | 168 | 429 | 3 | 241 | 4.76e-119 | 350 |
| Msa0107160 | MtrunA17_Chr1g0163101 | 60.209 | 191 | 35 | 4 | 1 | 170 | 1 | 171 | 4.24e-67 | 214 |
| Msa0107160 | MtrunA17_Chr1g0163101 | 74.725 | 91 | 20 | 1 | 431 | 521 | 77 | 164 | 8.54e-36 | 131 |
| Msa0107160 | MtrunA17_Chr1g0163141 | 65.359 | 153 | 39 | 2 | 32 | 170 | 18 | 170 | 1.18e-56 | 187 |
| Msa0107160 | MtrunA17_Chr1g0163141 | 47.015 | 134 | 50 | 3 | 409 | 521 | 30 | 163 | 2.01e-25 | 103 |
| Msa0107160 | MtrunA17_Chr1g0163131 | 38.629 | 321 | 130 | 9 | 5 | 278 | 6 | 306 | 2.39e-56 | 191 |
| Msa0107160 | MtrunA17_Chr1g0163131 | 72.826 | 92 | 23 | 1 | 430 | 521 | 77 | 166 | 3.26e-33 | 128 |
| Msa0107160 | MtrunA17_Chr1g0163131 | 45.455 | 77 | 40 | 1 | 357 | 433 | 232 | 306 | 8.83e-14 | 72.4 |
| Msa0107160 | MtrunA17_Chr6g0476181 | 62.252 | 151 | 40 | 2 | 32 | 170 | 9 | 154 | 2.39e-55 | 183 |
| Msa0107160 | MtrunA17_Chr6g0476181 | 57.798 | 109 | 23 | 2 | 430 | 521 | 45 | 147 | 3.09e-26 | 104 |
| Msa0107160 | MtrunA17_Chr1g0163181 | 31.522 | 460 | 233 | 17 | 15 | 428 | 1 | 424 | 7.88e-55 | 190 |
| Msa0107160 | MtrunA17_Chr1g0163261 | 37.736 | 318 | 122 | 11 | 17 | 290 | 9 | 294 | 2.19e-50 | 174 |
| Msa0107160 | MtrunA17_Chr1g0162161 | 56.954 | 151 | 36 | 2 | 32 | 170 | 11 | 144 | 1.85e-47 | 162 |
| Msa0107160 | MtrunA17_Chr1g0162161 | 71.739 | 92 | 25 | 1 | 430 | 521 | 47 | 137 | 9.77e-36 | 130 |
| Msa0107160 | MtrunA17_Chr1g0163201 | 31.195 | 452 | 166 | 20 | 32 | 428 | 26 | 387 | 4.84e-44 | 160 |
| Msa0107160 | MtrunA17_Chr1g0163161 | 53.741 | 147 | 37 | 4 | 37 | 170 | 1 | 129 | 3.04e-40 | 142 |
| Msa0107160 | MtrunA17_Chr1g0163161 | 63.717 | 113 | 38 | 1 | 409 | 518 | 8 | 120 | 2.71e-38 | 136 |
| Msa0107160 | MtrunA17_Chr1g0163081 | 52.980 | 151 | 37 | 3 | 32 | 170 | 13 | 141 | 3.64e-40 | 142 |
| Msa0107160 | MtrunA17_Chr1g0163081 | 75.000 | 84 | 16 | 2 | 430 | 513 | 49 | 127 | 1.44e-30 | 116 |
| Msa0107160 | MtrunA17_Chr1g0163251 | 35.032 | 314 | 129 | 13 | 26 | 295 | 14 | 296 | 6.24e-40 | 149 |
| Msa0107160 | MtrunA17_Chr1g0163231 | 35.714 | 308 | 118 | 11 | 17 | 280 | 9 | 280 | 9.36e-40 | 146 |
| Msa0107160 | MtrunA17_Chr1g0163121 | 47.682 | 151 | 39 | 3 | 32 | 170 | 18 | 140 | 2.80e-34 | 126 |
| Msa0107160 | MtrunA17_Chr1g0163121 | 65.217 | 92 | 20 | 2 | 430 | 521 | 54 | 133 | 6.14e-28 | 108 |
| Msa0107160 | MtrunA17_Chr1g0171611 | 33.446 | 296 | 129 | 9 | 17 | 280 | 9 | 268 | 1.24e-33 | 129 |
| Msa0107160 | MtrunA17_Chr1g0163111 | 32.669 | 251 | 109 | 10 | 199 | 428 | 12 | 223 | 3.11e-31 | 120 |
| Msa0107160 | MtrunA17_Chr1g0163151 | 31.746 | 252 | 100 | 8 | 199 | 428 | 15 | 216 | 3.73e-27 | 109 |
| Msa0107160 | MtrunA17_Chr1g0163091 | 43.919 | 148 | 55 | 5 | 177 | 303 | 3 | 143 | 3.05e-24 | 99.4 |
| Msa0107160 | MtrunA17_Chr1g0162151 | 29.682 | 283 | 93 | 9 | 177 | 432 | 3 | 206 | 5.73e-22 | 94.4 |
| Msa0107160 | MtrunA17_Chr1g0208771 | 23.913 | 460 | 263 | 18 | 36 | 431 | 24 | 460 | 1.43e-20 | 94.4 |
| Msa0107160 | MtrunA17_Chr8g0390841 | 23.469 | 490 | 285 | 21 | 15 | 428 | 37 | 512 | 1.26e-19 | 92.0 |
| Msa0107160 | MtrunA17_Chr4g0067431 | 26.061 | 330 | 179 | 15 | 12 | 291 | 10 | 324 | 1.92e-18 | 86.7 |
| Msa0107160 | MtrunA17_Chr1g0163071 | 25.890 | 309 | 160 | 12 | 33 | 291 | 10 | 299 | 7.43e-17 | 81.6 |
| Msa0107160 | MtrunA17_Chr1g0163241 | 35.772 | 123 | 58 | 5 | 32 | 140 | 30 | 145 | 2.41e-15 | 73.9 |
| Msa0107160 | MtrunA17_Chr3g0103181 | 23.934 | 305 | 172 | 12 | 7 | 278 | 2 | 279 | 2.07e-14 | 73.6 |
| Msa0107160 | MtrunA17_Chr7g0233561 | 24.847 | 326 | 169 | 15 | 10 | 281 | 11 | 314 | 2.68e-13 | 71.2 |
| Msa0107160 | MtrunA17_Chr1g0163191 | 37.037 | 108 | 42 | 4 | 26 | 107 | 14 | 121 | 4.16e-13 | 67.4 |
| Msa0107160 | MtrunA17_Chr1g0163221 | 24.375 | 320 | 188 | 13 | 11 | 294 | 5 | 306 | 6.72e-13 | 70.1 |
| Msa0107160 | MtrunA17_Chr3g0103151 | 30.000 | 140 | 82 | 5 | 15 | 138 | 10 | 149 | 8.05e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 86 sgRNAs with CRISPR-Local
Find 407 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGAATATGTGGGCAATTT+TGG | 0.142869 | 1_3:+17158784 | Msa0107160:CDS |
| AGAGAATGATTACTAGTTCT+TGG | 0.263261 | 1_3:-17156162 | None:intergenic |
| GGGCATGGTTCCTTTGTGGC+TGG | 0.277429 | 1_3:-17158504 | None:intergenic |
| TACGATATTTGTTAGAGTTT+TGG | 0.280588 | 1_3:-17164019 | None:intergenic |
| CAGACCCATTTGGAAGTCTA+AGG | 0.299120 | 1_3:-17157082 | None:intergenic |
| TTGAATTTGTCATGTAAATT+CGG | 0.311912 | 1_3:-17158953 | None:intergenic |
| CACATATTCCATATCTTCTT+CGG | 0.325520 | 1_3:-17158773 | None:intergenic |
| TTAATACCTTGAAACTGCTT+TGG | 0.331338 | 1_3:-17158525 | None:intergenic |
| AAAAGACATAATATATTTAG+TGG | 0.334344 | 1_3:+17159111 | Msa0107160:CDS |
| TTCCTTTGTGGCTGGGATAA+TGG | 0.345212 | 1_3:-17158496 | None:intergenic |
| GGTCTGAGTTCAAAATGAAT+TGG | 0.350012 | 1_3:+17157099 | Msa0107160:CDS |
| TATAATGAACATCTCGACTA+TGG | 0.355043 | 1_3:+17159186 | Msa0107160:CDS |
| CTTTGGGCATGGTTCCTTTG+TGG | 0.363966 | 1_3:-17158508 | None:intergenic |
| TAATACCTTGAAACTGCTTT+GGG | 0.373065 | 1_3:-17158524 | None:intergenic |
| AATCTGACCCTCCTTTGTAT+TGG | 0.385935 | 1_3:-17157202 | None:intergenic |
| GACAATGCCCGAAGAAGATA+TGG | 0.389565 | 1_3:+17158765 | Msa0107160:CDS |
| TAATATATTTAGTGGAAATT+CGG | 0.396970 | 1_3:+17159119 | Msa0107160:CDS |
| GGCATGGTTCCTTTGTGGCT+GGG | 0.407207 | 1_3:-17158503 | None:intergenic |
| ATGATGTTTGGCTTCAGAAT+TGG | 0.437267 | 1_3:+17157135 | Msa0107160:CDS |
| GCCTTAAAACACAAGGTCTC+AGG | 0.437600 | 1_3:+17158827 | Msa0107160:CDS |
| AAGGAACATGACTTAAAAGT+TGG | 0.442738 | 1_3:+17158420 | Msa0107160:CDS |
| CTAGTTCTTGGTCTTGAAGC+TGG | 0.445722 | 1_3:-17156150 | None:intergenic |
| GTCTGAGTTCAAAATGAATT+GGG | 0.455385 | 1_3:+17157100 | Msa0107160:CDS |
| GAATTTACATGACAAATTCA+AGG | 0.456040 | 1_3:+17158955 | Msa0107160:CDS |
| GTAATATCATTCAAAATCTC+AGG | 0.459755 | 1_3:-17164074 | None:intergenic |
| TTGAAGCTGGCGAAGTTGAA+TGG | 0.463192 | 1_3:-17156137 | None:intergenic |
| TACAACGAGGTGATGATGTT+TGG | 0.463515 | 1_3:+17157123 | Msa0107160:CDS |
| ATTCGGTGGAGTTGAAAGTA+GGG | 0.471281 | 1_3:+17159136 | Msa0107160:CDS |
| ACATATTCCATATCTTCTTC+GGG | 0.475083 | 1_3:-17158772 | None:intergenic |
| CGAAGAAGATATGGAATATG+TGG | 0.478018 | 1_3:+17158774 | Msa0107160:CDS |
| TTAGAAGTGTTGATGAGGAC+AGG | 0.485676 | 1_3:+17158322 | Msa0107160:CDS |
| TTTGGAAGTCTAAGGGATGT+TGG | 0.490503 | 1_3:-17157074 | None:intergenic |
| AGTGAAACTAGGATTCTCAT+TGG | 0.490637 | 1_3:-17157815 | None:intergenic |
| TCAATGTCAAGTGTTCACTA+TGG | 0.491973 | 1_3:+17156076 | None:intergenic |
| TGAAAGTAGGGGAAGGAACA+TGG | 0.498346 | 1_3:+17159148 | Msa0107160:CDS |
| CCTTGAAACTGCTTTGGGCA+TGG | 0.499094 | 1_3:-17158519 | None:intergenic |
| AATTCGGTGGAGTTGAAAGT+AGG | 0.502201 | 1_3:+17159135 | Msa0107160:CDS |
| TTGTCAATGTTTGTCCCTTG+AGG | 0.507957 | 1_3:-17157434 | None:intergenic |
| AAGGAAATTCGTAGAGACAT+TGG | 0.511665 | 1_3:+17157036 | Msa0107160:intron |
| AGAGATTGCAAAGTAAAGAC+TGG | 0.513081 | 1_3:+17159240 | Msa0107160:CDS |
| TGAATTAGAAAAGGTTTGCA+TGG | 0.513244 | 1_3:+17163877 | Msa0107160:intron |
| ACATCCCTTAGACTTCCAAA+TGG | 0.515725 | 1_3:+17157077 | Msa0107160:CDS |
| ATGGCCTTCAACATGAGATC+GGG | 0.518094 | 1_3:-17157848 | None:intergenic |
| GCTGGCGAAGTTGAATGGTT+TGG | 0.518589 | 1_3:-17156132 | None:intergenic |
| TGGACGTGGGAGTGAAGCTA+AGG | 0.519368 | 1_3:+17156096 | Msa0107160:CDS |
| TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1_3:+17159290 | Msa0107160:CDS |
| ACTGTTGCTGCTACACCTCA+AGG | 0.523151 | 1_3:+17157419 | Msa0107160:CDS |
| ATGGTAATTGTGAATGAAAG+TGG | 0.526717 | 1_3:-17158477 | None:intergenic |
| CCATGCCCAAAGCAGTTTCA+AGG | 0.526984 | 1_3:+17158519 | Msa0107160:CDS |
| GTGAAACTAGGATTCTCATT+GGG | 0.534567 | 1_3:-17157814 | None:intergenic |
| GACTATGGATGGTTCACTAA+AGG | 0.536976 | 1_3:+17159201 | Msa0107160:CDS |
| TATGGCCTTCAACATGAGAT+CGG | 0.541774 | 1_3:-17157849 | None:intergenic |
| TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1_3:+17158288 | Msa0107160:CDS |
| TATATTTAGTGGAAATTCGG+TGG | 0.544355 | 1_3:+17159122 | Msa0107160:CDS |
| CAATGATGAACAAGAAGCTA+AGG | 0.548779 | 1_3:+17157283 | Msa0107160:CDS |
| CATCCCTTAGACTTCCAAAT+GGG | 0.555762 | 1_3:+17157078 | Msa0107160:CDS |
| TATTCGTTTGAAAACCATGT+AGG | 0.557476 | 1_3:-17158267 | None:intergenic |
| ATGGATGGTTCACTAAAGGC+TGG | 0.558556 | 1_3:+17159205 | Msa0107160:CDS |
| TTTGGCTTCAGAATTGGAAG+AGG | 0.559399 | 1_3:+17157141 | Msa0107160:CDS |
| GATAATTTGAGAGTGAAACT+AGG | 0.566910 | 1_3:-17157826 | None:intergenic |
| ATGAACATCTCGACTATGGA+TGG | 0.566956 | 1_3:+17159190 | Msa0107160:CDS |
| TCAAGTGTTCACTATGGACG+TGG | 0.567496 | 1_3:+17156082 | Msa0107160:CDS |
| TGAAACAGAGGCTACCTACA+TGG | 0.580260 | 1_3:+17158253 | Msa0107160:intron |
| AACAATTAGAAGTGTTGATG+AGG | 0.583313 | 1_3:+17158317 | Msa0107160:CDS |
| TTTGCGCGCTCTCTCAGATG+TGG | 0.586381 | 1_3:+17157164 | Msa0107160:CDS |
| AGACCCATTTGGAAGTCTAA+GGG | 0.608527 | 1_3:-17157081 | None:intergenic |
| AATAGAGACAGAGGAGGCCG+CGG | 0.610798 | 1_3:+17157727 | Msa0107160:intron |
| GCAGAGGCTAATAGAGACAG+AGG | 0.621169 | 1_3:+17157718 | Msa0107160:intron |
| TGTGTTGAGGTTCTGAATGA+CGG | 0.625237 | 1_3:+17157341 | Msa0107160:CDS |
| CAATGATTATGATTGTGTTG+AGG | 0.625578 | 1_3:+17157328 | Msa0107160:CDS |
| GGAAGGAACATGGTTTGTAG+AGG | 0.629163 | 1_3:+17159158 | Msa0107160:CDS |
| GAAGAAGATATGGAATATGT+GGG | 0.632888 | 1_3:+17158775 | Msa0107160:CDS |
| TTCGGTGGAGTTGAAAGTAG+GGG | 0.634551 | 1_3:+17159137 | Msa0107160:CDS |
| GGACGTGGGAGTGAAGCTAA+GGG | 0.640577 | 1_3:+17156097 | Msa0107160:CDS |
| CTGTTGCTGCTACACCTCAA+GGG | 0.643334 | 1_3:+17157420 | Msa0107160:CDS |
| GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1_3:+17158293 | Msa0107160:CDS |
| GTGGAGTTGAAAGTAGGGGA+AGG | 0.644645 | 1_3:+17159141 | Msa0107160:CDS |
| TAGAAGTGTTGATGAGGACA+GGG | 0.646868 | 1_3:+17158323 | Msa0107160:CDS |
| ATTTCTTAGCTTTCTTACCG+CGG | 0.652512 | 1_3:-17157744 | None:intergenic |
| TACCATTATCCCAGCCACAA+AGG | 0.660933 | 1_3:+17158494 | Msa0107160:CDS |
| ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1_3:+17158289 | Msa0107160:CDS |
| AACAGCTGCCTTAAAACACA+AGG | 0.666453 | 1_3:+17158820 | Msa0107160:CDS |
| GTGTTGATGAGGACAGGGCA+CGG | 0.684939 | 1_3:+17158328 | Msa0107160:CDS |
| CAAGTGTTCACTATGGACGT+GGG | 0.700697 | 1_3:+17156083 | Msa0107160:CDS |
| GAGGCTAATAGAGACAGAGG+AGG | 0.708768 | 1_3:+17157721 | Msa0107160:intron |
| AAAATGAATTGGGTACAACG+AGG | 0.756191 | 1_3:+17157110 | Msa0107160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAATAAAAATAAA+AGG | + | chr1_3:17159833-17159852 | Msa0107160:intron | 0.0% |
| !! | AAAAATAAATAAAAATAAAA+GGG | + | chr1_3:17159834-17159853 | Msa0107160:intron | 0.0% |
| !! | TAATAATAATAATAATAATA+AGG | - | chr1_3:17163229-17163248 | None:intergenic | 0.0% |
| !!! | TTGTTGTTATTATTATTATT+TGG | + | chr1_3:17162631-17162650 | Msa0107160:intron | 10.0% |
| !!! | GGTTTTTTTATTTAAATTTA+TGG | + | chr1_3:17162871-17162890 | Msa0107160:intron | 10.0% |
| !!! | AAATATTATTTTAGATACAA+TGG | + | chr1_3:17163835-17163854 | Msa0107160:intron | 10.0% |
| !! | ATACAGAAAGATATAAATTA+TGG | + | chr1_3:17156406-17156425 | Msa0107160:intron | 15.0% |
| !!! | TATGGTTTTATTATCATTAA+TGG | + | chr1_3:17156424-17156443 | Msa0107160:intron | 15.0% |
| !! | TTATTATCATTAATGGAATT+TGG | + | chr1_3:17156431-17156450 | Msa0107160:intron | 15.0% |
| !! | AATTCATGAAATTAAATTCA+TGG | + | chr1_3:17156688-17156707 | Msa0107160:intron | 15.0% |
| !! | AGAAAAAACATAAATAAAGT+GGG | - | chr1_3:17157591-17157610 | None:intergenic | 15.0% |
| !! | AAGAAAAAACATAAATAAAG+TGG | - | chr1_3:17157592-17157611 | None:intergenic | 15.0% |
| !! | CTTGAAAAATAAAATTAAGA+TGG | - | chr1_3:17158858-17158877 | None:intergenic | 15.0% |
| !! | AAAAGACATAATATATTTAG+TGG | + | chr1_3:17159111-17159130 | Msa0107160:CDS | 15.0% |
| !! | TAATATATTTAGTGGAAATT+CGG | + | chr1_3:17159119-17159138 | Msa0107160:CDS | 15.0% |
| !! | TTAACATATTTATGAATATC+AGG | + | chr1_3:17159993-17160012 | Msa0107160:intron | 15.0% |
| !!! | TTTTTTTTATTGTTGTTGTT+GGG | - | chr1_3:17160140-17160159 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATTGTTGTTGT+TGG | - | chr1_3:17160141-17160160 | None:intergenic | 15.0% |
| !!! | ATATTCCATTTTTACATAAT+GGG | - | chr1_3:17160629-17160648 | None:intergenic | 15.0% |
| !!! | TCAAATTTTGTTGATATATA+AGG | - | chr1_3:17161052-17161071 | None:intergenic | 15.0% |
| !!! | TTAAATTTTTAGAACTTCAT+TGG | - | chr1_3:17161093-17161112 | None:intergenic | 15.0% |
| !!! | TTTTTAATATTAAAAGAGTG+AGG | - | chr1_3:17161558-17161577 | None:intergenic | 15.0% |
| !! | TTCACAAAAATTTCTTAAAT+GGG | - | chr1_3:17161626-17161645 | None:intergenic | 15.0% |
| !! | TTTCACAAAAATTTCTTAAA+TGG | - | chr1_3:17161627-17161646 | None:intergenic | 15.0% |
| !! | AAAATCATACTACTTTAATT+TGG | + | chr1_3:17161839-17161858 | Msa0107160:intron | 15.0% |
| !!! | AAATCATACTACTTTAATTT+GGG | + | chr1_3:17161840-17161859 | Msa0107160:intron | 15.0% |
| !! | TGAAATGATAATAAATAAGT+AGG | - | chr1_3:17162008-17162027 | None:intergenic | 15.0% |
| !!! | AATTGAGATAATAGTTATTT+TGG | - | chr1_3:17162164-17162183 | None:intergenic | 15.0% |
| !! | ATAAGAAATTCTATTCAAAA+TGG | - | chr1_3:17162525-17162544 | None:intergenic | 15.0% |
| !! | ATAAATAAGATAAAAAACCA+TGG | - | chr1_3:17162670-17162689 | None:intergenic | 15.0% |
| !! | TTAATTAAAAAACATTGATG+AGG | + | chr1_3:17162788-17162807 | Msa0107160:intron | 15.0% |
| !!! | TTATGACTAATTTTTTGATA+TGG | + | chr1_3:17163442-17163461 | Msa0107160:intron | 15.0% |
| !!! | TATGACTAATTTTTTGATAT+GGG | + | chr1_3:17163443-17163462 | Msa0107160:intron | 15.0% |
| !! | TCATTTAATAATGAAAAACA+AGG | - | chr1_3:17163570-17163589 | None:intergenic | 15.0% |
| !!! | TTTGAAATTTTTAGAGATAT+TGG | - | chr1_3:17163801-17163820 | None:intergenic | 15.0% |
| !!! | CTTTTAGTTTTTCAATATAA+AGG | + | chr1_3:17163918-17163937 | Msa0107160:CDS | 15.0% |
| !! | ATCAAAAGAATGAATGAAAA+CGG | - | chr1_3:17156206-17156225 | None:intergenic | 20.0% |
| !!! | TCCTTTTGAATTATCATAAA+TGG | + | chr1_3:17156371-17156390 | Msa0107160:intron | 20.0% |
| !! | TCCATTTATGATAATTCAAA+AGG | - | chr1_3:17156375-17156394 | None:intergenic | 20.0% |
| !! | TTGATTGTTAGAAACTAAAA+CGG | + | chr1_3:17156916-17156935 | Msa0107160:intron | 20.0% |
| !!! | AGATTTTCATGTCATTATAT+TGG | + | chr1_3:17157220-17157239 | Msa0107160:intron | 20.0% |
| !! | AAAAAGAAAATCAACTCAAA+TGG | + | chr1_3:17157389-17157408 | Msa0107160:CDS | 20.0% |
| !! | TAAAAACATGTACATTTGTA+TGG | - | chr1_3:17157560-17157579 | None:intergenic | 20.0% |
| !! | TATTAACAAGAGAAACATTT+GGG | - | chr1_3:17157989-17158008 | None:intergenic | 20.0% |
| !! | AGTTTGATACATTTAAATAC+TGG | + | chr1_3:17158158-17158177 | Msa0107160:intron | 20.0% |
| !! | TTGAATTTGTCATGTAAATT+CGG | - | chr1_3:17158956-17158975 | None:intergenic | 20.0% |
| !! | TTTCTTTCATTTAAACCAAT+GGG | - | chr1_3:17159429-17159448 | None:intergenic | 20.0% |
| !! | AAGTTGAAGAAAAAGAATAT+AGG | + | chr1_3:17159472-17159491 | Msa0107160:intron | 20.0% |
| !! | AAAGAAAGAATCTTGAAAAA+AGG | - | chr1_3:17159781-17159800 | None:intergenic | 20.0% |
| !!! | ACAATTCTAAGATGATAAAT+TGG | - | chr1_3:17160514-17160533 | None:intergenic | 20.0% |
| !!! | CATATTCCATTTTTACATAA+TGG | - | chr1_3:17160630-17160649 | None:intergenic | 20.0% |
| !! | CATTATGTAAAAATGGAATA+TGG | + | chr1_3:17160628-17160647 | Msa0107160:intron | 20.0% |
| !!! | TAGTATTGTCATTTCAAATA+TGG | - | chr1_3:17160766-17160785 | None:intergenic | 20.0% |
| !!! | AAGAAATTTTTGTGAAATGT+TGG | + | chr1_3:17161630-17161649 | Msa0107160:intron | 20.0% |
| !!! | AGAAATTTTTGTGAAATGTT+GGG | + | chr1_3:17161631-17161650 | Msa0107160:intron | 20.0% |
| !! | TCAAAATGGAAAAAATGAAT+AGG | - | chr1_3:17162511-17162530 | None:intergenic | 20.0% |
| !!! | TCATTGTTATTTTTCCTAAT+AGG | - | chr1_3:17162555-17162574 | None:intergenic | 20.0% |
| !! | AAGAAATATAAAAGACTCAA+AGG | - | chr1_3:17162703-17162722 | None:intergenic | 20.0% |
| !! | GTTAATAAAAAATTGACGAA+AGG | + | chr1_3:17163047-17163066 | Msa0107160:intron | 20.0% |
| !! | TAGATTTAAAAACTTACTGT+TGG | + | chr1_3:17163401-17163420 | Msa0107160:intron | 20.0% |
| !!! | TTAGTGTCAAAATTTTTAAG+TGG | - | chr1_3:17163665-17163684 | None:intergenic | 20.0% |
| !! | TTTGTAGAGAAATATTGAAA+AGG | + | chr1_3:17163765-17163784 | Msa0107160:intron | 20.0% |
| !!! | CTAAAATAATATTTTGCACT+CGG | - | chr1_3:17163829-17163848 | None:intergenic | 20.0% |
| !!! | TTTGTCTTTTGAATTAGAAA+AGG | + | chr1_3:17163868-17163887 | Msa0107160:intron | 20.0% |
| !!! | TTAGTTTTTCAATATAAAGG+AGG | + | chr1_3:17163921-17163940 | Msa0107160:CDS | 20.0% |
| !!! | TAGTTTTTCAATATAAAGGA+GGG | + | chr1_3:17163922-17163941 | Msa0107160:CDS | 20.0% |
| ! | GCTGTAAATAATGAATGAAA+AGG | - | chr1_3:17156304-17156323 | None:intergenic | 25.0% |
| ! | TCATGAAATTAAATTCATGG+AGG | + | chr1_3:17156691-17156710 | Msa0107160:intron | 25.0% |
| ! | TTTGTGAAATCTGAACTAAT+TGG | - | chr1_3:17156771-17156790 | None:intergenic | 25.0% |
| ! | CGTTACTAATTGAAATTCAT+TGG | + | chr1_3:17156984-17157003 | Msa0107160:intron | 25.0% |
| ! | TATATTGGATGATAGTAGTT+TGG | + | chr1_3:17157235-17157254 | Msa0107160:intron | 25.0% |
| !! | TTGATTTTCTTTTTCTTGAG+GGG | - | chr1_3:17157383-17157402 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCTTTTTCTTGA+GGG | - | chr1_3:17157384-17157403 | None:intergenic | 25.0% |
| !!! | AGTTGATTTTCTTTTTCTTG+AGG | - | chr1_3:17157385-17157404 | None:intergenic | 25.0% |
| !! | CATTTGTATGGATTAAAAAG+TGG | - | chr1_3:17157548-17157567 | None:intergenic | 25.0% |
| !!! | AAATGTACATGTTTTTAGTC+CGG | + | chr1_3:17157563-17157582 | Msa0107160:intron | 25.0% |
| ! | AAATGCACAAAAACTAAACA+TGG | + | chr1_3:17157763-17157782 | Msa0107160:CDS | 25.0% |
| ! | AATGCACAAAAACTAAACAT+GGG | + | chr1_3:17157764-17157783 | Msa0107160:CDS | 25.0% |
| !! | ATCATGGGAAAAAAAAGTAT+AGG | - | chr1_3:17157888-17157907 | None:intergenic | 25.0% |
| !! | AGAGACTTTCATTTTACTAT+AGG | + | chr1_3:17157933-17157952 | Msa0107160:intron | 25.0% |
| ! | ATTAACAAGAGAAACATTTG+GGG | - | chr1_3:17157988-17158007 | None:intergenic | 25.0% |
| ! | CTATTAACAAGAGAAACATT+TGG | - | chr1_3:17157990-17158009 | None:intergenic | 25.0% |
| ! | ACTAACAGAAAACATATTCA+AGG | + | chr1_3:17158027-17158046 | Msa0107160:intron | 25.0% |
| !! | TTGATTTTCAAATGTGTCTT+TGG | - | chr1_3:17158100-17158119 | None:intergenic | 25.0% |
| ! | TTAACTATATGTAATGTGCA+TGG | - | chr1_3:17158194-17158213 | None:intergenic | 25.0% |
| ! | AGTAGTATGTTTACATTACA+TGG | - | chr1_3:17158679-17158698 | None:intergenic | 25.0% |
| ! | AGAACAAAGAAAACAGTTTA+AGG | - | chr1_3:17158910-17158929 | None:intergenic | 25.0% |
| ! | GAATTTACATGACAAATTCA+AGG | + | chr1_3:17158955-17158974 | Msa0107160:CDS | 25.0% |
| ! | TTTGTTCTTATATATGCAGT+TGG | + | chr1_3:17159065-17159084 | Msa0107160:intron | 25.0% |
| ! | TTATGTTAAACCCCTTAAAA+TGG | - | chr1_3:17159353-17159372 | None:intergenic | 25.0% |
| ! | CTTTCTTTCATTTAAACCAA+TGG | - | chr1_3:17159430-17159449 | None:intergenic | 25.0% |
| !!! | CATTGGTTTAAATGAAAGAA+AGG | + | chr1_3:17159428-17159447 | Msa0107160:intron | 25.0% |
| ! | GTTTAAATGAAAGAAAGGTT+CGG | + | chr1_3:17159433-17159452 | Msa0107160:intron | 25.0% |
| ! | AAGAATATAGGAAAATCAGA+AGG | + | chr1_3:17159484-17159503 | Msa0107160:intron | 25.0% |
| ! | GTTGAAGAATCTTTGATTAA+AGG | - | chr1_3:17159568-17159587 | None:intergenic | 25.0% |
| ! | TTACTTTACTGTTAATGTTG+TGG | - | chr1_3:17159590-17159609 | None:intergenic | 25.0% |
| !!! | ATTCTCAAACACTATTTTAG+AGG | - | chr1_3:17159631-17159650 | None:intergenic | 25.0% |
| ! | TAGTGTTAAAATAGCTACTA+TGG | + | chr1_3:17159729-17159748 | Msa0107160:intron | 25.0% |
| ! | TTAAAATAGCTACTATGGAA+TGG | + | chr1_3:17159734-17159753 | Msa0107160:intron | 25.0% |
| !!! | AGTAGTTTTCAATTTTTCAG+AGG | - | chr1_3:17159904-17159923 | None:intergenic | 25.0% |
| ! | ATCAAGGTTTCTATGTTAAA+TGG | - | chr1_3:17160220-17160239 | None:intergenic | 25.0% |
| ! | TTTAACATAGAAACCTTGAT+TGG | + | chr1_3:17160220-17160239 | Msa0107160:intron | 25.0% |
| ! | ATGTGGTTATCATATTAACT+TGG | + | chr1_3:17160451-17160470 | Msa0107160:intron | 25.0% |
| !! | CTAGTCTTCTATATTTATAG+AGG | + | chr1_3:17160592-17160611 | Msa0107160:intron | 25.0% |
| ! | TAGTCTATTTGAATTTGAAG+TGG | + | chr1_3:17161130-17161149 | Msa0107160:intron | 25.0% |
| ! | AAAACAGAAAAGAGAAAAGA+TGG | - | chr1_3:17161332-17161351 | None:intergenic | 25.0% |
| ! | TCTTCTTCAAGAATTTATCT+TGG | + | chr1_3:17161355-17161374 | Msa0107160:intron | 25.0% |
| !! | AGTTATTGATAGTTGATTAG+TGG | + | chr1_3:17161598-17161617 | Msa0107160:intron | 25.0% |
| ! | TTCTTATAATGCAACCTATT+AGG | + | chr1_3:17162538-17162557 | Msa0107160:intron | 25.0% |
| !! | ATGAGAAATGAAGATGTTTT+AGG | + | chr1_3:17162571-17162590 | Msa0107160:intron | 25.0% |
| !! | AAGACAGAAAGTATAAACAA+TGG | - | chr1_3:17162601-17162620 | None:intergenic | 25.0% |
| !! | TGATTTAAGACACTAAAACT+TGG | + | chr1_3:17162850-17162869 | Msa0107160:intron | 25.0% |
| !!! | AATTTTCAAGAAACAGTGTT+GGG | - | chr1_3:17163317-17163336 | None:intergenic | 25.0% |
| !!! | AATTTTTTGATATGGGAATC+AGG | + | chr1_3:17163450-17163469 | Msa0107160:intron | 25.0% |
| !!! | ATTTTTTGATATGGGAATCA+GGG | + | chr1_3:17163451-17163470 | Msa0107160:intron | 25.0% |
| ! | GTATTGTTTAGACTAAAATG+TGG | + | chr1_3:17163504-17163523 | Msa0107160:intron | 25.0% |
| ! | AAAACAAATGAGTTCGAAAT+TGG | - | chr1_3:17163741-17163760 | None:intergenic | 25.0% |
| !!! | TACGATATTTGTTAGAGTTT+TGG | - | chr1_3:17164022-17164041 | None:intergenic | 25.0% |
| ! | GTAATATCATTCAAAATCTC+AGG | - | chr1_3:17164077-17164096 | None:intergenic | 25.0% |
| !! | TTGTCAATATTTGTCTTTTG+AGG | - | chr1_3:17164116-17164135 | None:intergenic | 25.0% |
| ! | AGAGAATGATTACTAGTTCT+TGG | - | chr1_3:17156165-17156184 | None:intergenic | 30.0% |
| AGAATGAATGAAAACGGAAA+AGG | - | chr1_3:17156200-17156219 | None:intergenic | 30.0% | |
| CATATGCTTGACTTAAAATG+TGG | + | chr1_3:17156851-17156870 | Msa0107160:intron | 30.0% | |
| GTCTGAGTTCAAAATGAATT+GGG | + | chr1_3:17157100-17157119 | Msa0107160:CDS | 30.0% | |
| ! | CTTGTAGTTTTCCAATACAA+AGG | + | chr1_3:17157191-17157210 | Msa0107160:CDS | 30.0% |
| ! | TAGTTTTCCAATACAAAGGA+GGG | + | chr1_3:17157195-17157214 | Msa0107160:CDS | 30.0% |
| CAATGATTATGATTGTGTTG+AGG | + | chr1_3:17157328-17157347 | Msa0107160:CDS | 30.0% | |
| !!! | AATGTACATGTTTTTAGTCC+GGG | + | chr1_3:17157564-17157583 | Msa0107160:intron | 30.0% |
| !!! | ATAGTTTTAACGTTTTGCAG+AGG | + | chr1_3:17157702-17157721 | Msa0107160:intron | 30.0% |
| GATAATTTGAGAGTGAAACT+AGG | - | chr1_3:17157829-17157848 | None:intergenic | 30.0% | |
| ATAGGAAACATACCAATCTA+TGG | - | chr1_3:17157870-17157889 | None:intergenic | 30.0% | |
| GGTACAAAAATCACTATCAT+GGG | - | chr1_3:17157903-17157922 | None:intergenic | 30.0% | |
| AGGTACAAAAATCACTATCA+TGG | - | chr1_3:17157904-17157923 | None:intergenic | 30.0% | |
| TTAACAAGAGAAACATTTGG+GGG | - | chr1_3:17157987-17158006 | None:intergenic | 30.0% | |
| AGCTAACAATAGAGACATTT+AGG | + | chr1_3:17158123-17158142 | Msa0107160:intron | 30.0% | |
| TATTCGTTTGAAAACCATGT+AGG | - | chr1_3:17158270-17158289 | None:intergenic | 30.0% | |
| TACATGAATGAGTTATTGCA+AGG | + | chr1_3:17158288-17158307 | Msa0107160:CDS | 30.0% | |
| ACATGAATGAGTTATTGCAA+GGG | + | chr1_3:17158289-17158308 | Msa0107160:CDS | 30.0% | |
| !! | AACAATTAGAAGTGTTGATG+AGG | + | chr1_3:17158317-17158336 | Msa0107160:CDS | 30.0% |
| !!! | CAATGACAGTTTTTTAATGC+AGG | + | chr1_3:17158377-17158396 | Msa0107160:intron | 30.0% |
| AAGGAACATGACTTAAAAGT+TGG | + | chr1_3:17158420-17158439 | Msa0107160:CDS | 30.0% | |
| ATGGTAATTGTGAATGAAAG+TGG | - | chr1_3:17158480-17158499 | None:intergenic | 30.0% | |
| TAATACCTTGAAACTGCTTT+GGG | - | chr1_3:17158527-17158546 | None:intergenic | 30.0% | |
| TTAATACCTTGAAACTGCTT+TGG | - | chr1_3:17158528-17158547 | None:intergenic | 30.0% | |
| !! | CTGATTTTATTTGCACTTGT+TGG | - | chr1_3:17158744-17158763 | None:intergenic | 30.0% |
| ACATATTCCATATCTTCTTC+GGG | - | chr1_3:17158775-17158794 | None:intergenic | 30.0% | |
| CACATATTCCATATCTTCTT+CGG | - | chr1_3:17158776-17158795 | None:intergenic | 30.0% | |
| GAAGAAGATATGGAATATGT+GGG | + | chr1_3:17158775-17158794 | Msa0107160:CDS | 30.0% | |
| ! | TTTTGTGACATCATTAGACA+AGG | + | chr1_3:17158979-17158998 | Msa0107160:CDS | 30.0% |
| TATATTTAGTGGAAATTCGG+TGG | + | chr1_3:17159122-17159141 | Msa0107160:CDS | 30.0% | |
| TATAATGAACATCTCGACTA+TGG | + | chr1_3:17159186-17159205 | Msa0107160:CDS | 30.0% | |
| TATTCTCTAATTGTGAGACT+CGG | + | chr1_3:17159381-17159400 | Msa0107160:intron | 30.0% | |
| !! | GATTTTCTTAACCTTTAGGA+AGG | - | chr1_3:17159871-17159890 | None:intergenic | 30.0% |
| TCCTAAAGGTTAAGAAAATC+AGG | + | chr1_3:17159871-17159890 | Msa0107160:intron | 30.0% | |
| TTATGAATATCAGGTCAACA+TGG | + | chr1_3:17160002-17160021 | Msa0107160:intron | 30.0% | |
| !!! | TTGCTTCTGTGATTTTAACT+AGG | - | chr1_3:17160104-17160123 | None:intergenic | 30.0% |
| !! | AAAAGTATCAGCATGATGTA+TGG | + | chr1_3:17160178-17160197 | Msa0107160:intron | 30.0% |
| ATATCGTATGGAACAAAGAA+TGG | + | chr1_3:17160360-17160379 | Msa0107160:intron | 30.0% | |
| ! | ATCATATTAACTTGGCAAGA+TGG | + | chr1_3:17160459-17160478 | Msa0107160:intron | 30.0% |
| TAGAGCCCATTATGTAAAAA+TGG | + | chr1_3:17160621-17160640 | Msa0107160:intron | 30.0% | |
| TGATTGGCATTTACAATACA+AGG | - | chr1_3:17160792-17160811 | None:intergenic | 30.0% | |
| TGTATTGTAAATGCCAATCA+TGG | + | chr1_3:17160792-17160811 | Msa0107160:intron | 30.0% | |
| TGCATTCTAATTACCATGAT+TGG | - | chr1_3:17160808-17160827 | None:intergenic | 30.0% | |
| TCATGGTAATTAGAATGCAT+AGG | + | chr1_3:17160809-17160828 | Msa0107160:intron | 30.0% | |
| AATGCATAGGACACATATAT+TGG | + | chr1_3:17160822-17160841 | Msa0107160:intron | 30.0% | |
| AAAAGTTATACCACATCAGA+TGG | - | chr1_3:17160920-17160939 | None:intergenic | 30.0% | |
| ! | GTGGTATAACTTTTCTAATC+AGG | + | chr1_3:17160926-17160945 | Msa0107160:intron | 30.0% |
| ! | GTATAACTTTTCTAATCAGG+TGG | + | chr1_3:17160929-17160948 | Msa0107160:intron | 30.0% |
| AAAATGAATCACGACTTCAT+GGG | + | chr1_3:17161166-17161185 | Msa0107160:intron | 30.0% | |
| GAATTTATCTTGGTTAGTGT+TGG | + | chr1_3:17161365-17161384 | Msa0107160:intron | 30.0% | |
| ATTGAATGTGACCAATACAA+TGG | + | chr1_3:17161419-17161438 | Msa0107160:intron | 30.0% | |
| ! | ATTTTTGTGAAATGTTGGGT+TGG | + | chr1_3:17161635-17161654 | Msa0107160:intron | 30.0% |
| !!! | TCCATTTTTGGGTTCTTAAA+CGG | - | chr1_3:17161728-17161747 | None:intergenic | 30.0% |
| AAGTAGGAGTAATTCTTAGA+TGG | - | chr1_3:17161774-17161793 | None:intergenic | 30.0% | |
| TCATTAGTCAAAATAGTCAG+TGG | + | chr1_3:17161925-17161944 | Msa0107160:intron | 30.0% | |
| TTGAAGCTAGAAACATCATA+GGG | - | chr1_3:17162299-17162318 | None:intergenic | 30.0% | |
| ! | TTTGAAGCTAGAAACATCAT+AGG | - | chr1_3:17162300-17162319 | None:intergenic | 30.0% |
| !! | TGTCATATTGCTTTTCAGAA+CGG | + | chr1_3:17162322-17162341 | Msa0107160:intron | 30.0% |
| ! | TGTAATAACTTGTAAAGAGC+TGG | + | chr1_3:17162348-17162367 | Msa0107160:intron | 30.0% |
| ! | GCTTTTTGTGAAGATGAAAA+TGG | - | chr1_3:17162388-17162407 | None:intergenic | 30.0% |
| AGTTGAATGGTTTGATAGAA+TGG | - | chr1_3:17162435-17162454 | None:intergenic | 30.0% | |
| CTAACCACCTATGATTATAA+GGG | + | chr1_3:17162811-17162830 | Msa0107160:intron | 30.0% | |
| ACAGTAACCCTTATAATCAT+AGG | - | chr1_3:17162821-17162840 | None:intergenic | 30.0% | |
| !! | ATTTTCAAGAAACAGTGTTG+GGG | - | chr1_3:17163316-17163335 | None:intergenic | 30.0% |
| !! | GAATTTTCAAGAAACAGTGT+TGG | - | chr1_3:17163318-17163337 | None:intergenic | 30.0% |
| TTTCTTGAAAATTCCACTAC+CGG | + | chr1_3:17163324-17163343 | Msa0107160:intron | 30.0% | |
| ATGATTATCTAATCACATGC+TGG | - | chr1_3:17163359-17163378 | None:intergenic | 30.0% | |
| TAGAGAGAACCAAAAAACAT+TGG | - | chr1_3:17163481-17163500 | None:intergenic | 30.0% | |
| TGAATTAGAAAAGGTTTGCA+TGG | + | chr1_3:17163877-17163896 | Msa0107160:intron | 30.0% | |
| !! | CTCTTTAAGTGGACTGTTTA+AGG | + | chr1_3:17156528-17156547 | Msa0107160:intron | 35.0% |
| CATCACGAAAACTGTATTGA+GGG | - | chr1_3:17156580-17156599 | None:intergenic | 35.0% | |
| AATGTCTCTACGAATTTCCT+TGG | - | chr1_3:17157037-17157056 | None:intergenic | 35.0% | |
| AAGGAAATTCGTAGAGACAT+TGG | + | chr1_3:17157036-17157055 | Msa0107160:intron | 35.0% | |
| ! | ATTTTGAACTCAGACCCATT+TGG | - | chr1_3:17157095-17157114 | None:intergenic | 35.0% |
| GGTCTGAGTTCAAAATGAAT+TGG | + | chr1_3:17157099-17157118 | Msa0107160:CDS | 35.0% | |
| AAAATGAATTGGGTACAACG+AGG | + | chr1_3:17157110-17157129 | Msa0107160:CDS | 35.0% | |
| ! | ATGATGTTTGGCTTCAGAAT+TGG | + | chr1_3:17157135-17157154 | Msa0107160:CDS | 35.0% |
| ! | GTAGTTTTCCAATACAAAGG+AGG | + | chr1_3:17157194-17157213 | Msa0107160:CDS | 35.0% |
| CAATGATGAACAAGAAGCTA+AGG | + | chr1_3:17157283-17157302 | Msa0107160:CDS | 35.0% | |
| !!! | CTTGCCTGAAATTTTTTGCA+GGG | - | chr1_3:17157483-17157502 | None:intergenic | 35.0% |
| !!! | ACTTGCCTGAAATTTTTTGC+AGG | - | chr1_3:17157484-17157503 | None:intergenic | 35.0% |
| AACATAAATAAAGTGGGTCC+CGG | - | chr1_3:17157585-17157604 | None:intergenic | 35.0% | |
| ! | ATTTCTTAGCTTTCTTACCG+CGG | - | chr1_3:17157747-17157766 | None:intergenic | 35.0% |
| GTGAAACTAGGATTCTCATT+GGG | - | chr1_3:17157817-17157836 | None:intergenic | 35.0% | |
| AGTGAAACTAGGATTCTCAT+TGG | - | chr1_3:17157818-17157837 | None:intergenic | 35.0% | |
| TGAAAGTCTCTCACACATTT+AGG | - | chr1_3:17157924-17157943 | None:intergenic | 35.0% | |
| TAAATCATGACCTGAAACAG+AGG | + | chr1_3:17158241-17158260 | Msa0107160:intron | 35.0% | |
| !!! | GACAGTTTTTTAATGCAGGT+TGG | + | chr1_3:17158381-17158400 | Msa0107160:intron | 35.0% |
| !!! | GTTTTTTAATGCAGGTTGGT+TGG | + | chr1_3:17158385-17158404 | Msa0107160:intron | 35.0% |
| !! | TGGTTGGAAGTCATTTTCAA+AGG | + | chr1_3:17158401-17158420 | Msa0107160:CDS | 35.0% |
| CGAAGAAGATATGGAATATG+TGG | + | chr1_3:17158774-17158793 | Msa0107160:CDS | 35.0% | |
| ! | ATGGAATATGTGGGCAATTT+TGG | + | chr1_3:17158784-17158803 | Msa0107160:CDS | 35.0% |
| ! | TGTCTTTTTAACAGCTCACT+TGG | - | chr1_3:17159099-17159118 | None:intergenic | 35.0% |
| AGAGATTGCAAAGTAAAGAC+TGG | + | chr1_3:17159240-17159259 | Msa0107160:CDS | 35.0% | |
| TGTGCAAAATCATGTGTTCA+AGG | + | chr1_3:17159290-17159309 | Msa0107160:CDS | 35.0% | |
| !!! | CTTGTGTCTTGCCATTTTAA+GGG | + | chr1_3:17159339-17159358 | Msa0107160:intron | 35.0% |
| !!! | TTGTGTCTTGCCATTTTAAG+GGG | + | chr1_3:17159340-17159359 | Msa0107160:intron | 35.0% |
| TTTCTGCACTGAATCATCTT+AGG | - | chr1_3:17159665-17159684 | None:intergenic | 35.0% | |
| AGAATCTTGAAAAAAGGACG+TGG | - | chr1_3:17159775-17159794 | None:intergenic | 35.0% | |
| TCAACACATATCCTTCCTAA+AGG | + | chr1_3:17159857-17159876 | Msa0107160:intron | 35.0% | |
| ! | GCCTGATTTTCTTAACCTTT+AGG | - | chr1_3:17159875-17159894 | None:intergenic | 35.0% |
| TTTAGTACTCTAGCTGTTAG+TGG | - | chr1_3:17159966-17159985 | None:intergenic | 35.0% | |
| !!! | AGTGGCAATTTTTTACTGCA+AGG | - | chr1_3:17160031-17160050 | None:intergenic | 35.0% |
| ! | ATTGTGTTTTCAGCTCAAAG+TGG | - | chr1_3:17160049-17160068 | None:intergenic | 35.0% |
| TGCTTAAGAATCTCCAATCA+AGG | - | chr1_3:17160236-17160255 | None:intergenic | 35.0% | |
| TTGAAAGAGCTACCTTATAC+AGG | + | chr1_3:17160301-17160320 | Msa0107160:intron | 35.0% | |
| TGGAACAAAGAATGGTTACT+TGG | + | chr1_3:17160368-17160387 | Msa0107160:intron | 35.0% | |
| AACAAAGAATGGTTACTTGG+AGG | + | chr1_3:17160371-17160390 | Msa0107160:intron | 35.0% | |
| AAAGACTGAAGTGAGATTTG+TGG | + | chr1_3:17160427-17160446 | Msa0107160:intron | 35.0% | |
| GACTAGACATGAAGAATTGT+AGG | - | chr1_3:17160578-17160597 | None:intergenic | 35.0% | |
| ! | AACCAAATATTCTGAGAGCT+TGG | + | chr1_3:17160715-17160734 | Msa0107160:intron | 35.0% |
| TTCCTCTTACTAACATGTTG+TGG | - | chr1_3:17160979-17160998 | None:intergenic | 35.0% | |
| GAAAATGAATCACGACTTCA+TGG | + | chr1_3:17161165-17161184 | Msa0107160:intron | 35.0% | |
| ! | TTGGATTTTCTCTCTCTATG+AGG | + | chr1_3:17161384-17161403 | Msa0107160:intron | 35.0% |
| AGGGTCTTAACCATTTAAGA+CGG | + | chr1_3:17161472-17161491 | Msa0107160:intron | 35.0% | |
| ! | CTAATAGGTACCGTCTTAAA+TGG | - | chr1_3:17161485-17161504 | None:intergenic | 35.0% |
| ! | CATTTAAGACGGTACCTATT+AGG | + | chr1_3:17161483-17161502 | Msa0107160:intron | 35.0% |
| TACCTATTAGGTACTCCATT+GGG | + | chr1_3:17161495-17161514 | Msa0107160:intron | 35.0% | |
| TTAAGTAAGATTCTCCCCAA+TGG | - | chr1_3:17161513-17161532 | None:intergenic | 35.0% | |
| GGAGGAATTGAGTTCTTATT+AGG | + | chr1_3:17161656-17161675 | Msa0107160:intron | 35.0% | |
| TCCGTTTAAGAACCCAAAAA+TGG | + | chr1_3:17161724-17161743 | Msa0107160:intron | 35.0% | |
| !! | CAATGGAGACATCCATTTTT+GGG | - | chr1_3:17161739-17161758 | None:intergenic | 35.0% |
| ! | ACAATGGAGACATCCATTTT+TGG | - | chr1_3:17161740-17161759 | None:intergenic | 35.0% |
| TTTCACATCACCTTAGAGTA+GGG | - | chr1_3:17161821-17161840 | None:intergenic | 35.0% | |
| ! | TTTTCACATCACCTTAGAGT+AGG | - | chr1_3:17161822-17161841 | None:intergenic | 35.0% |
| ! | CGATTTTTGAATGTAGTCGA+TGG | - | chr1_3:17162193-17162212 | None:intergenic | 35.0% |
| TAAATACACAGCCTAGCTAA+CGG | + | chr1_3:17162225-17162244 | Msa0107160:intron | 35.0% | |
| TGGTTTGATAGAATGGTGAA+AGG | - | chr1_3:17162428-17162447 | None:intergenic | 35.0% | |
| TTGGCAAAATTAGTACTCCA+TGG | + | chr1_3:17162650-17162669 | Msa0107160:intron | 35.0% | |
| GCTAACCACCTATGATTATA+AGG | + | chr1_3:17162810-17162829 | Msa0107160:intron | 35.0% | |
| GTAACCCTTATAATCATAGG+TGG | - | chr1_3:17162818-17162837 | None:intergenic | 35.0% | |
| ATCACTTGGACTCAATCACT+TGG | + | chr1_3:17156496-17156515 | Msa0107160:intron | 40.0% | |
| GGTCATAGGAACTCTTTAAG+TGG | + | chr1_3:17156517-17156536 | Msa0107160:intron | 40.0% | |
| CCATCACGAAAACTGTATTG+AGG | - | chr1_3:17156581-17156600 | None:intergenic | 40.0% | |
| ! | CCTCAATACAGTTTTCGTGA+TGG | + | chr1_3:17156578-17156597 | Msa0107160:intron | 40.0% |
| GTGCAAGAATAGAGCAAGAA+TGG | - | chr1_3:17156626-17156645 | None:intergenic | 40.0% | |
| TCATGTATTAGTGCTACGCA+TGG | + | chr1_3:17156799-17156818 | Msa0107160:intron | 40.0% | |
| TGTTCTTGCAGATGATTCCA+AGG | + | chr1_3:17157017-17157036 | Msa0107160:intron | 40.0% | |
| TTTGGAAGTCTAAGGGATGT+TGG | - | chr1_3:17157077-17157096 | None:intergenic | 40.0% | |
| ACATCCCTTAGACTTCCAAA+TGG | + | chr1_3:17157077-17157096 | Msa0107160:CDS | 40.0% | |
| CATCCCTTAGACTTCCAAAT+GGG | + | chr1_3:17157078-17157097 | Msa0107160:CDS | 40.0% | |
| AGACCCATTTGGAAGTCTAA+GGG | - | chr1_3:17157084-17157103 | None:intergenic | 40.0% | |
| ! | TACAACGAGGTGATGATGTT+TGG | + | chr1_3:17157123-17157142 | Msa0107160:CDS | 40.0% |
| ! | TTTGGCTTCAGAATTGGAAG+AGG | + | chr1_3:17157141-17157160 | Msa0107160:CDS | 40.0% |
| AATCTGACCCTCCTTTGTAT+TGG | - | chr1_3:17157205-17157224 | None:intergenic | 40.0% | |
| !! | TGTGTTGAGGTTCTGAATGA+CGG | + | chr1_3:17157341-17157360 | Msa0107160:CDS | 40.0% |
| TTGTCAATGTTTGTCCCTTG+AGG | - | chr1_3:17157437-17157456 | None:intergenic | 40.0% | |
| GCAACCCTGCAAAAAATTTC+AGG | + | chr1_3:17157476-17157495 | Msa0107160:CDS | 40.0% | |
| TTATCCCGATCTCATGTTGA+AGG | + | chr1_3:17157844-17157863 | Msa0107160:intron | 40.0% | |
| TATGGCCTTCAACATGAGAT+CGG | - | chr1_3:17157852-17157871 | None:intergenic | 40.0% | |
| TCATGTTGAAGGCCATAGAT+TGG | + | chr1_3:17157855-17157874 | Msa0107160:intron | 40.0% | |
| AAGAGAAACATTTGGGGGTT+TGG | - | chr1_3:17157982-17158001 | None:intergenic | 40.0% | |
| GAATGAGTTATTGCAAGGGA+AGG | + | chr1_3:17158293-17158312 | Msa0107160:CDS | 40.0% | |
| !! | TTAGAAGTGTTGATGAGGAC+AGG | + | chr1_3:17158322-17158341 | Msa0107160:CDS | 40.0% |
| !! | TAGAAGTGTTGATGAGGACA+GGG | + | chr1_3:17158323-17158342 | Msa0107160:CDS | 40.0% |
| AACAGCTGCCTTAAAACACA+AGG | + | chr1_3:17158820-17158839 | Msa0107160:CDS | 40.0% | |
| ! | TCCTGAGACCTTGTGTTTTA+AGG | - | chr1_3:17158831-17158850 | None:intergenic | 40.0% |
| ! | AATTCGGTGGAGTTGAAAGT+AGG | + | chr1_3:17159135-17159154 | Msa0107160:CDS | 40.0% |
| ! | ATTCGGTGGAGTTGAAAGTA+GGG | + | chr1_3:17159136-17159155 | Msa0107160:CDS | 40.0% |
| ATGAACATCTCGACTATGGA+TGG | + | chr1_3:17159190-17159209 | Msa0107160:CDS | 40.0% | |
| GACTATGGATGGTTCACTAA+AGG | + | chr1_3:17159201-17159220 | Msa0107160:CDS | 40.0% | |
| !!! | GCTTGTGTCTTGCCATTTTA+AGG | + | chr1_3:17159338-17159357 | Msa0107160:intron | 40.0% |
| TCTTGATGAACCTTGAGGAT+TGG | - | chr1_3:17159527-17159546 | None:intergenic | 40.0% | |
| CAATGTCTTGATGAACCTTG+AGG | - | chr1_3:17159532-17159551 | None:intergenic | 40.0% | |
| CATCAAGACATTGTCTTCCT+CGG | + | chr1_3:17159539-17159558 | Msa0107160:intron | 40.0% | |
| GAAGTGAGATTTGTGGTATG+TGG | + | chr1_3:17160434-17160453 | Msa0107160:intron | 40.0% | |
| AGCCAAGCTCTCAGAATATT+TGG | - | chr1_3:17160720-17160739 | None:intergenic | 40.0% | |
| ATCAGGTGGAAATGTCACAT+AGG | + | chr1_3:17160943-17160962 | Msa0107160:intron | 40.0% | |
| ! | GAATTTGAAGTGGAGTTGCT+CGG | + | chr1_3:17161140-17161159 | Msa0107160:intron | 40.0% |
| CACCATCATCACTATTGTTG+CGG | + | chr1_3:17161222-17161241 | Msa0107160:intron | 40.0% | |
| TAACACGACGATAGAGAAAC+TGG | - | chr1_3:17161280-17161299 | None:intergenic | 40.0% | |
| AGTTTCTCTATCGTCGTGTT+AGG | + | chr1_3:17161279-17161298 | Msa0107160:intron | 40.0% | |
| ATGGAATTCGATAACGCTTC+GGG | - | chr1_3:17161313-17161332 | None:intergenic | 40.0% | |
| GATGGAATTCGATAACGCTT+CGG | - | chr1_3:17161314-17161333 | None:intergenic | 40.0% | |
| ATGTGACCAATACAATGGTC+TGG | + | chr1_3:17161424-17161443 | Msa0107160:intron | 40.0% | |
| GTACCTATTAGGTACTCCAT+TGG | + | chr1_3:17161494-17161513 | Msa0107160:intron | 40.0% | |
| ACCTATTAGGTACTCCATTG+GGG | + | chr1_3:17161496-17161515 | Msa0107160:intron | 40.0% | |
| !! | TTAAGACCCCCACTTTTAAG+CGG | + | chr1_3:17161529-17161548 | Msa0107160:intron | 40.0% |
| TGAGGATTCCGCTTAAAAGT+GGG | - | chr1_3:17161540-17161559 | None:intergenic | 40.0% | |
| !! | TTTGTGAAATGTTGGGTTGG+AGG | + | chr1_3:17161638-17161657 | Msa0107160:intron | 40.0% |
| AATGGATGTCTCCATTGTAG+AGG | + | chr1_3:17161742-17161761 | Msa0107160:intron | 40.0% | |
| TTCACATCACCTTAGAGTAG+GGG | - | chr1_3:17161820-17161839 | None:intergenic | 40.0% | |
| TGAGAATAATGCCGTTAGCT+AGG | - | chr1_3:17162239-17162258 | None:intergenic | 40.0% | |
| GCTAGAAACATCATAGGGAT+AGG | - | chr1_3:17162294-17162313 | None:intergenic | 40.0% | |
| !!! | CAGGGAATGCCAATGTTTTT+TGG | + | chr1_3:17163469-17163488 | Msa0107160:intron | 40.0% |
| TCAAGTGTTCACTATGGACG+TGG | + | chr1_3:17156082-17156101 | Msa0107160:CDS | 45.0% | |
| CAAGTGTTCACTATGGACGT+GGG | + | chr1_3:17156083-17156102 | Msa0107160:CDS | 45.0% | |
| TTGAAGCTGGCGAAGTTGAA+TGG | - | chr1_3:17156140-17156159 | None:intergenic | 45.0% | |
| !! | CTAGTTCTTGGTCTTGAAGC+TGG | - | chr1_3:17156153-17156172 | None:intergenic | 45.0% |
| !! | GCAGGTTAGCTTACATGACA+GGG | - | chr1_3:17156332-17156351 | None:intergenic | 45.0% |
| !! | AGCAGGTTAGCTTACATGAC+AGG | - | chr1_3:17156333-17156352 | None:intergenic | 45.0% |
| GGTGGAACTCATTGATCACT+TGG | + | chr1_3:17156482-17156501 | Msa0107160:intron | 45.0% | |
| GGACTCAATCACTTGGTCAT+AGG | + | chr1_3:17156503-17156522 | Msa0107160:intron | 45.0% | |
| ATTAGTGCTACGCATGGCTT+TGG | + | chr1_3:17156805-17156824 | Msa0107160:intron | 45.0% | |
| CAGACCCATTTGGAAGTCTA+AGG | - | chr1_3:17157085-17157104 | None:intergenic | 45.0% | |
| ! | CTTTTTCTTGAGGGGTTGTC+TGG | - | chr1_3:17157375-17157394 | None:intergenic | 45.0% |
| ATGGCCTTCAACATGAGATC+GGG | - | chr1_3:17157851-17157870 | None:intergenic | 45.0% | |
| ATGTAGGTAGCCTCTGTTTC+AGG | - | chr1_3:17158254-17158273 | None:intergenic | 45.0% | |
| TGAAACAGAGGCTACCTACA+TGG | + | chr1_3:17158253-17158272 | Msa0107160:intron | 45.0% | |
| TACCATTATCCCAGCCACAA+AGG | + | chr1_3:17158494-17158513 | Msa0107160:CDS | 45.0% | |
| TTCCTTTGTGGCTGGGATAA+TGG | - | chr1_3:17158499-17158518 | None:intergenic | 45.0% | |
| GACAATGCCCGAAGAAGATA+TGG | + | chr1_3:17158765-17158784 | Msa0107160:CDS | 45.0% | |
| GCCTTAAAACACAAGGTCTC+AGG | + | chr1_3:17158827-17158846 | Msa0107160:CDS | 45.0% | |
| TTCGGTGGAGTTGAAAGTAG+GGG | + | chr1_3:17159137-17159156 | Msa0107160:CDS | 45.0% | |
| TGAAAGTAGGGGAAGGAACA+TGG | + | chr1_3:17159148-17159167 | Msa0107160:CDS | 45.0% | |
| ! | GGAAGGAACATGGTTTGTAG+AGG | + | chr1_3:17159158-17159177 | Msa0107160:CDS | 45.0% |
| ATGGATGGTTCACTAAAGGC+TGG | + | chr1_3:17159205-17159224 | Msa0107160:CDS | 45.0% | |
| TGCAACTGTGTTCTTCCCAT+TGG | + | chr1_3:17159411-17159430 | Msa0107160:intron | 45.0% | |
| AAATCAGAAGGCAGTCCAAC+AGG | + | chr1_3:17159496-17159515 | Msa0107160:intron | 45.0% | |
| TGATGAACCTTGAGGATTGG+AGG | - | chr1_3:17159524-17159543 | None:intergenic | 45.0% | |
| TCTTTGATTAAAGGCGACCG+AGG | - | chr1_3:17159559-17159578 | None:intergenic | 45.0% | |
| GGCATGATCAGCATATCGTA+TGG | + | chr1_3:17160348-17160367 | Msa0107160:intron | 45.0% | |
| GTCGATTACTCCATCTGATG+TGG | + | chr1_3:17160907-17160926 | Msa0107160:intron | 45.0% | |
| AGGTGGAAATGTCACATAGG+CGG | + | chr1_3:17160946-17160965 | Msa0107160:intron | 45.0% | |
| AATGTCACATAGGCGGTTAG+TGG | + | chr1_3:17160953-17160972 | Msa0107160:intron | 45.0% | |
| GGCCACAACATGTTAGTAAG+AGG | + | chr1_3:17160974-17160993 | Msa0107160:intron | 45.0% | |
| ! | GATGATGGTGATAGTGACGA+CGG | - | chr1_3:17161212-17161231 | None:intergenic | 45.0% |
| ! | GATGTTGATTACGGCGTCAA+TGG | - | chr1_3:17161248-17161267 | None:intergenic | 45.0% |
| ! | CGGCTACTCGATGTTGATTA+CGG | - | chr1_3:17161257-17161276 | None:intergenic | 45.0% |
| GCAAGACCAGACCATTGTAT+TGG | - | chr1_3:17161433-17161452 | None:intergenic | 45.0% | |
| TTGCGAAGACCATCTCCAAT+GGG | + | chr1_3:17161449-17161468 | Msa0107160:intron | 45.0% | |
| AATGGTTAAGACCCTCCCAT+TGG | - | chr1_3:17161467-17161486 | None:intergenic | 45.0% | |
| ! | TCCCCAATGGAGTACCTAAT+AGG | - | chr1_3:17161500-17161519 | None:intergenic | 45.0% |
| AGGATTCCGCTTAAAAGTGG+GGG | - | chr1_3:17161538-17161557 | None:intergenic | 45.0% | |
| GAGGATTCCGCTTAAAAGTG+GGG | - | chr1_3:17161539-17161558 | None:intergenic | 45.0% | |
| GTGAGGATTCCGCTTAAAAG+TGG | - | chr1_3:17161541-17161560 | None:intergenic | 45.0% | |
| ! | CAGACAGGGACATCTAAAGT+AGG | - | chr1_3:17161790-17161809 | None:intergenic | 45.0% |
| TTACAGCTGGGGAAGTTGAA+TGG | - | chr1_3:17162448-17162467 | None:intergenic | 45.0% | |
| !! | AAGCTCTTGGTCTTACAGCT+GGG | - | chr1_3:17162460-17162479 | None:intergenic | 45.0% |
| TGAGTGTGCTTACAAGCTCT+TGG | - | chr1_3:17162473-17162492 | None:intergenic | 45.0% | |
| !!! | TATTAATTTCATTATTATTT+TGG | + | chr1_3:17158542-17158561 | Msa0107160:intron | 5.0% |
| !!! | GTTTTTTTATTTAAATTTAT+GGG | + | chr1_3:17162872-17162891 | Msa0107160:intron | 5.0% |
| GCTGGCGAAGTTGAATGGTT+TGG | - | chr1_3:17156135-17156154 | None:intergenic | 50.0% | |
| AAGGAAAACCCTGACAGAGC+TGG | - | chr1_3:17156356-17156375 | None:intergenic | 50.0% | |
| CTCGCGAGCGATTCATCATT+TGG | + | chr1_3:17156461-17156480 | Msa0107160:intron | 50.0% | |
| GCGAGCGATTCATCATTTGG+TGG | + | chr1_3:17156464-17156483 | Msa0107160:intron | 50.0% | |
| ACTGTTGCTGCTACACCTCA+AGG | + | chr1_3:17157419-17157438 | Msa0107160:CDS | 50.0% | |
| CTGTTGCTGCTACACCTCAA+GGG | + | chr1_3:17157420-17157439 | Msa0107160:CDS | 50.0% | |
| GCAGAGGCTAATAGAGACAG+AGG | + | chr1_3:17157718-17157737 | Msa0107160:intron | 50.0% | |
| GAGGCTAATAGAGACAGAGG+AGG | + | chr1_3:17157721-17157740 | Msa0107160:intron | 50.0% | |
| CTTTGGGCATGGTTCCTTTG+TGG | - | chr1_3:17158511-17158530 | None:intergenic | 50.0% | |
| ! | CCTTGAAACTGCTTTGGGCA+TGG | - | chr1_3:17158522-17158541 | None:intergenic | 50.0% |
| CCATGCCCAAAGCAGTTTCA+AGG | + | chr1_3:17158519-17158538 | Msa0107160:CDS | 50.0% | |
| !! | TCTGCTTTTGATCCCCGACA+AGG | + | chr1_3:17158700-17158719 | Msa0107160:intron | 50.0% |
| GTGGAGTTGAAAGTAGGGGA+AGG | + | chr1_3:17159141-17159160 | Msa0107160:CDS | 50.0% | |
| !! | TGAGGATTGGAGGTACCTGT+TGG | - | chr1_3:17159514-17159533 | None:intergenic | 50.0% |
| ACAGGTACCTCCAATCCTCA+AGG | + | chr1_3:17159514-17159533 | Msa0107160:intron | 50.0% | |
| ACCTTATACAGGAAGCCCCA+AGG | + | chr1_3:17160312-17160331 | Msa0107160:intron | 50.0% | |
| TCCTTGGGGCTTCCTGTATA+AGG | - | chr1_3:17160316-17160335 | None:intergenic | 50.0% | |
| CCCTCTGATTGTCTTCCTTG+GGG | - | chr1_3:17160330-17160349 | None:intergenic | 50.0% | |
| CCCCAAGGAAGACAATCAGA+GGG | + | chr1_3:17160327-17160346 | Msa0107160:intron | 50.0% | |
| GCCCTCTGATTGTCTTCCTT+GGG | - | chr1_3:17160331-17160350 | None:intergenic | 50.0% | |
| TGCCCTCTGATTGTCTTCCT+TGG | - | chr1_3:17160332-17160351 | None:intergenic | 50.0% | |
| ! | TTCTGAGAGCTTGGCTGCAA+TGG | + | chr1_3:17160724-17160743 | Msa0107160:intron | 50.0% |
| AATCACGACTTCATGGGCGT+GGG | + | chr1_3:17161172-17161191 | Msa0107160:intron | 50.0% | |
| GGCCGCAACAATAGTGATGA+TGG | - | chr1_3:17161227-17161246 | None:intergenic | 50.0% | |
| CACGACGATAGAGAAACTGG+CGG | - | chr1_3:17161277-17161296 | None:intergenic | 50.0% | |
| CTCTATCGTCGTGTTAGGTG+TGG | + | chr1_3:17161284-17161303 | Msa0107160:intron | 50.0% | |
| GAATTCGATAACGCTTCGGG+TGG | - | chr1_3:17161310-17161329 | None:intergenic | 50.0% | |
| CTTGCGAAGACCATCTCCAA+TGG | + | chr1_3:17161448-17161467 | Msa0107160:intron | 50.0% | |
| GAAGACCATCTCCAATGGGA+GGG | + | chr1_3:17161453-17161472 | Msa0107160:intron | 50.0% | |
| TAAGACCCTCCCATTGGAGA+TGG | - | chr1_3:17161461-17161480 | None:intergenic | 50.0% | |
| GATGGTCAGAGCCTCTACAA+TGG | - | chr1_3:17161756-17161775 | None:intergenic | 50.0% | |
| !! | AGCTCTTGGTCTTACAGCTG+GGG | - | chr1_3:17162459-17162478 | None:intergenic | 50.0% |
| !! | CAAGCTCTTGGTCTTACAGC+TGG | - | chr1_3:17162461-17162480 | None:intergenic | 50.0% |
| CACATGCTGGATGTTGACAC+CGG | - | chr1_3:17163346-17163365 | None:intergenic | 50.0% | |
| TGGACGTGGGAGTGAAGCTA+AGG | + | chr1_3:17156096-17156115 | Msa0107160:CDS | 55.0% | |
| GGACGTGGGAGTGAAGCTAA+GGG | + | chr1_3:17156097-17156116 | Msa0107160:CDS | 55.0% | |
| TAACCTGCTCCAGCTCTGTC+AGG | + | chr1_3:17156344-17156363 | Msa0107160:intron | 55.0% | |
| AACCTGCTCCAGCTCTGTCA+GGG | + | chr1_3:17156345-17156364 | Msa0107160:intron | 55.0% | |
| TTTGCGCGCTCTCTCAGATG+TGG | + | chr1_3:17157164-17157183 | Msa0107160:CDS | 55.0% | |
| AATAGAGACAGAGGAGGCCG+CGG | + | chr1_3:17157727-17157746 | Msa0107160:intron | 55.0% | |
| ! | GTGTTGATGAGGACAGGGCA+CGG | + | chr1_3:17158328-17158347 | Msa0107160:CDS | 55.0% |
| GGCATGGTTCCTTTGTGGCT+GGG | - | chr1_3:17158506-17158525 | None:intergenic | 55.0% | |
| TGCATGTCGACGACCTTGTC+GGG | - | chr1_3:17158716-17158735 | None:intergenic | 55.0% | |
| CTGCATGTCGACGACCTTGT+CGG | - | chr1_3:17158717-17158736 | None:intergenic | 55.0% | |
| GCCCCAAGGAAGACAATCAG+AGG | + | chr1_3:17160326-17160345 | Msa0107160:intron | 55.0% | |
| GAATCACGACTTCATGGGCG+TGG | + | chr1_3:17161171-17161190 | Msa0107160:intron | 55.0% | |
| CGAAGACCATCTCCAATGGG+AGG | + | chr1_3:17161452-17161471 | Msa0107160:intron | 55.0% | |
| TGCCTGTCACCCCTACTCTA+AGG | + | chr1_3:17161808-17161827 | Msa0107160:intron | 55.0% | |
| CACCTTAGAGTAGGGGTGAC+AGG | - | chr1_3:17161813-17161832 | None:intergenic | 55.0% | |
| CTGGATGTTGACACCGGTAG+TGG | - | chr1_3:17163340-17163359 | None:intergenic | 55.0% | |
| AACCCTGACAGAGCTGGAGC+AGG | - | chr1_3:17156350-17156369 | None:intergenic | 60.0% | |
| GGGCATGGTTCCTTTGTGGC+TGG | - | chr1_3:17158507-17158526 | None:intergenic | 60.0% | |
| GCATGTCGACGACCTTGTCG+GGG | - | chr1_3:17158715-17158734 | None:intergenic | 60.0% | |
| GTAGGGGTGACAGGCAGACA+GGG | - | chr1_3:17161804-17161823 | None:intergenic | 60.0% | |
| AGTAGGGGTGACAGGCAGAC+AGG | - | chr1_3:17161805-17161824 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 17156079 | 17164163 | 17156079 | ID=Msa0107160;Name=Msa0107160 |
| chr1_3 | mRNA | 17156079 | 17164163 | 17156079 | ID=Msa0107160-mRNA-1;Parent=Msa0107160;Name=Msa0107160-mRNA-1;_AED=0.18;_eAED=0.19;_QI=0|0|0|1|0.11|0.2|10|0|521 |
| chr1_3 | exon | 17156079 | 17156171 | 17156079 | ID=Msa0107160-mRNA-1:exon:6461;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17157050 | 17157216 | 17157050 | ID=Msa0107160-mRNA-1:exon:6462;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17157253 | 17157501 | 17157253 | ID=Msa0107160-mRNA-1:exon:6463;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17157732 | 17157858 | 17157732 | ID=Msa0107160-mRNA-1:exon:6464;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17158261 | 17158353 | 17158261 | ID=Msa0107160-mRNA-1:exon:6465;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17158399 | 17158540 | 17158399 | ID=Msa0107160-mRNA-1:exon:6466;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17158722 | 17158850 | 17158722 | ID=Msa0107160-mRNA-1:exon:6467;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17158942 | 17159000 | 17158942 | ID=Msa0107160-mRNA-1:exon:6468;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17159084 | 17159311 | 17159084 | ID=Msa0107160-mRNA-1:exon:6469;Parent=Msa0107160-mRNA-1 |
| chr1_3 | exon | 17163885 | 17164163 | 17163885 | ID=Msa0107160-mRNA-1:exon:6470;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17156079 | 17156171 | 17156079 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17157050 | 17157216 | 17157050 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17157253 | 17157501 | 17157253 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17157732 | 17157858 | 17157732 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17158261 | 17158353 | 17158261 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17158399 | 17158540 | 17158399 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17158722 | 17158850 | 17158722 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17158942 | 17159000 | 17158942 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17159084 | 17159311 | 17159084 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| chr1_3 | CDS | 17163885 | 17164163 | 17163885 | ID=Msa0107160-mRNA-1:cds;Parent=Msa0107160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
