Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0109110 | XP_039683216.1 | 60.834 | 743 | 278 | 3 | 160 | 889 | 57 | 799 | 0.0 | 956 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0109110 | sp|Q9SZL8|FRS5_ARATH | 32.237 | 608 | 393 | 11 | 181 | 776 | 77 | 677 | 7.27e-95 | 322 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0109110 | A0A396J342 | 60.565 | 743 | 280 | 3 | 160 | 889 | 58 | 800 | 0.0 | 944 |
Gene ID | Type | Classification |
---|---|---|
Msa0109110 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0109110 | MtrunA17_Chr2g0287651 | 60.565 | 743 | 280 | 3 | 160 | 889 | 58 | 800 | 0.0 | 944 |
Msa0109110 | MtrunA17_Chr1g0203051 | 37.124 | 598 | 363 | 5 | 125 | 712 | 19 | 613 | 4.65e-137 | 427 |
Msa0109110 | MtrunA17_Chr5g0448761 | 32.624 | 564 | 367 | 7 | 181 | 733 | 64 | 625 | 1.75e-92 | 312 |
Msa0109110 | MtrunA17_Chr1g0202341 | 30.742 | 566 | 378 | 8 | 176 | 733 | 50 | 609 | 4.75e-92 | 308 |
Msa0109110 | MtrunA17_Chr3g0082121 | 31.287 | 668 | 388 | 16 | 180 | 814 | 46 | 675 | 2.70e-88 | 298 |
Msa0109110 | MtrunA17_Chr8g0363841 | 31.004 | 558 | 371 | 6 | 185 | 733 | 25 | 577 | 1.31e-87 | 296 |
Msa0109110 | MtrunA17_Chr2g0324011 | 31.250 | 560 | 375 | 4 | 181 | 734 | 14 | 569 | 2.72e-87 | 292 |
Msa0109110 | MtrunA17_Chr5g0441581 | 28.453 | 601 | 387 | 11 | 181 | 762 | 36 | 612 | 2.89e-79 | 273 |
Msa0109110 | MtrunA17_Chr6g0458391 | 29.758 | 578 | 370 | 10 | 168 | 734 | 214 | 766 | 7.33e-79 | 274 |
Msa0109110 | MtrunA17_Chr6g0458391 | 32.374 | 139 | 82 | 4 | 181 | 311 | 95 | 229 | 8.65e-13 | 72.8 |
Msa0109110 | MtrunA17_Chr1g0203721 | 27.975 | 647 | 443 | 11 | 174 | 803 | 61 | 701 | 1.58e-76 | 270 |
Msa0109110 | MtrunA17_Chr1g0207551 | 29.010 | 586 | 398 | 9 | 181 | 759 | 38 | 612 | 4.07e-76 | 267 |
Msa0109110 | MtrunA17_Chr1g0198761 | 27.562 | 722 | 465 | 17 | 183 | 866 | 53 | 754 | 1.34e-75 | 265 |
Msa0109110 | MtrunA17_Chr2g0296781 | 27.492 | 662 | 454 | 11 | 181 | 825 | 1 | 653 | 5.08e-75 | 262 |
Msa0109110 | MtrunA17_Chr3g0080351 | 28.800 | 625 | 385 | 13 | 176 | 778 | 75 | 661 | 1.41e-74 | 263 |
Msa0109110 | MtrunA17_Chr6g0477261 | 28.388 | 546 | 352 | 9 | 310 | 828 | 12 | 545 | 1.07e-70 | 248 |
Msa0109110 | MtrunA17_Chr2g0329031 | 28.328 | 586 | 396 | 10 | 180 | 759 | 17 | 584 | 1.65e-70 | 249 |
Msa0109110 | MtrunA17_Chr5g0448511 | 30.825 | 412 | 276 | 5 | 386 | 789 | 45 | 455 | 3.05e-64 | 227 |
Msa0109110 | MtrunA17_Chr2g0276841 | 28.007 | 582 | 354 | 14 | 183 | 730 | 76 | 626 | 4.54e-63 | 228 |
Msa0109110 | MtrunA17_Chr2g0291591 | 29.572 | 514 | 328 | 14 | 164 | 662 | 52 | 546 | 2.42e-61 | 219 |
Msa0109110 | MtrunA17_Chr5g0440451 | 26.380 | 652 | 410 | 21 | 173 | 788 | 39 | 656 | 6.07e-59 | 219 |
Msa0109110 | MtrunA17_Chr2g0287061 | 26.970 | 571 | 341 | 14 | 182 | 733 | 188 | 701 | 1.27e-58 | 216 |
Msa0109110 | MtrunA17_Chr5g0431001 | 31.010 | 416 | 270 | 7 | 183 | 583 | 67 | 480 | 5.19e-58 | 208 |
Msa0109110 | MtrunA17_Chr1g0196541 | 24.658 | 657 | 441 | 13 | 181 | 813 | 1 | 627 | 1.57e-57 | 212 |
Msa0109110 | MtrunA17_Chr2g0291581 | 27.204 | 658 | 421 | 19 | 96 | 733 | 2 | 621 | 7.03e-56 | 206 |
Msa0109110 | MtrunA17_Chr3g0118611 | 28.329 | 413 | 287 | 6 | 353 | 759 | 118 | 527 | 1.35e-54 | 204 |
Msa0109110 | MtrunA17_Chr2g0294841 | 27.769 | 623 | 396 | 18 | 139 | 728 | 2 | 603 | 8.96e-54 | 201 |
Msa0109110 | MtrunA17_Chr1g0164591 | 33.333 | 309 | 192 | 4 | 263 | 566 | 8 | 307 | 5.65e-50 | 180 |
Msa0109110 | MtrunA17_Chr2g0290391 | 25.172 | 580 | 388 | 12 | 181 | 734 | 55 | 614 | 3.03e-49 | 187 |
Msa0109110 | MtrunA17_Chr2g0308841 | 34.783 | 230 | 149 | 1 | 511 | 739 | 4 | 233 | 1.18e-43 | 159 |
Msa0109110 | MtrunA17_Chr7g0258861 | 32.042 | 284 | 189 | 3 | 181 | 462 | 14 | 295 | 4.48e-37 | 142 |
Msa0109110 | MtrunA17_Chr8g0389811 | 37.681 | 138 | 82 | 2 | 145 | 278 | 48 | 185 | 5.39e-21 | 92.4 |
Msa0109110 | MtrunA17_Chr1g0171741 | 27.344 | 256 | 162 | 6 | 55 | 307 | 28 | 262 | 3.38e-18 | 85.9 |
Msa0109110 | MtrunA17_Chr1g0149131 | 36.364 | 110 | 65 | 1 | 458 | 562 | 1 | 110 | 1.02e-16 | 77.4 |
Msa0109110 | MtrunA17_Chr8g0340801 | 33.945 | 109 | 70 | 1 | 288 | 396 | 1 | 107 | 4.52e-15 | 72.4 |
Msa0109110 | MtrunA17_Chr6g0473421 | 42.500 | 80 | 46 | 0 | 173 | 252 | 51 | 130 | 4.20e-13 | 68.2 |
Msa0109110 | MtrunA17_Chr2g0329361 | 36.752 | 117 | 72 | 2 | 171 | 286 | 55 | 170 | 5.14e-12 | 67.4 |
Msa0109110 | MtrunA17_Chr2g0331371 | 32.540 | 126 | 85 | 0 | 173 | 298 | 51 | 176 | 6.06e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0109110 | AT4G38180.1 | 32.237 | 608 | 393 | 11 | 181 | 776 | 77 | 677 | 7.39e-96 | 322 |
Msa0109110 | AT4G15090.1 | 29.412 | 595 | 405 | 8 | 181 | 768 | 55 | 641 | 7.14e-88 | 301 |
Msa0109110 | AT4G15090.5 | 29.412 | 595 | 405 | 8 | 181 | 768 | 55 | 641 | 7.14e-88 | 301 |
Msa0109110 | AT4G15090.3 | 29.412 | 595 | 405 | 8 | 181 | 768 | 55 | 641 | 7.14e-88 | 301 |
Msa0109110 | AT4G15090.2 | 29.412 | 595 | 405 | 8 | 181 | 768 | 55 | 641 | 7.14e-88 | 301 |
Msa0109110 | AT4G15090.4 | 29.412 | 595 | 405 | 8 | 181 | 768 | 55 | 641 | 7.14e-88 | 301 |
Msa0109110 | AT3G22170.2 | 27.744 | 656 | 423 | 11 | 125 | 759 | 15 | 640 | 4.56e-79 | 276 |
Msa0109110 | AT3G22170.1 | 27.744 | 656 | 423 | 11 | 125 | 759 | 15 | 640 | 4.56e-79 | 276 |
Msa0109110 | AT1G76320.1 | 29.768 | 561 | 369 | 9 | 181 | 733 | 1 | 544 | 6.14e-71 | 251 |
Msa0109110 | AT1G76320.4 | 29.768 | 561 | 369 | 9 | 181 | 733 | 1 | 544 | 6.14e-71 | 251 |
Msa0109110 | AT1G76320.2 | 29.768 | 561 | 369 | 9 | 181 | 733 | 1 | 544 | 7.34e-71 | 251 |
Msa0109110 | AT1G76320.3 | 29.768 | 561 | 369 | 9 | 181 | 733 | 1 | 544 | 1.06e-70 | 249 |
Msa0109110 | AT3G06250.2 | 28.920 | 574 | 332 | 17 | 181 | 737 | 194 | 708 | 9.19e-64 | 231 |
Msa0109110 | AT3G06250.1 | 28.920 | 574 | 332 | 17 | 181 | 737 | 194 | 708 | 9.19e-64 | 231 |
Msa0109110 | AT3G06250.3 | 28.920 | 574 | 332 | 17 | 181 | 737 | 194 | 708 | 9.19e-64 | 231 |
Msa0109110 | AT4G19990.6 | 26.833 | 600 | 375 | 11 | 182 | 759 | 26 | 583 | 3.90e-61 | 224 |
Msa0109110 | AT4G19990.2 | 26.833 | 600 | 375 | 11 | 182 | 759 | 26 | 583 | 3.90e-61 | 224 |
Msa0109110 | AT4G19990.3 | 26.833 | 600 | 375 | 11 | 182 | 759 | 26 | 583 | 4.58e-61 | 223 |
Msa0109110 | AT4G19990.4 | 26.833 | 600 | 375 | 11 | 182 | 759 | 26 | 583 | 4.58e-61 | 223 |
Msa0109110 | AT4G19990.5 | 26.833 | 600 | 375 | 11 | 182 | 759 | 26 | 583 | 5.46e-61 | 223 |
Msa0109110 | AT4G19990.7 | 26.833 | 600 | 375 | 11 | 182 | 759 | 40 | 597 | 8.72e-61 | 223 |
Msa0109110 | AT1G10240.2 | 27.833 | 600 | 386 | 15 | 159 | 730 | 24 | 604 | 1.59e-59 | 217 |
Msa0109110 | AT1G10240.1 | 27.833 | 600 | 386 | 15 | 159 | 730 | 24 | 604 | 1.59e-59 | 217 |
Msa0109110 | AT5G18960.2 | 27.385 | 566 | 354 | 16 | 181 | 737 | 215 | 732 | 2.36e-59 | 219 |
Msa0109110 | AT5G18960.1 | 27.385 | 566 | 354 | 16 | 181 | 737 | 215 | 732 | 2.36e-59 | 219 |
Msa0109110 | AT1G52520.1 | 27.721 | 588 | 352 | 17 | 181 | 733 | 89 | 638 | 4.33e-58 | 213 |
Msa0109110 | AT1G80010.1 | 28.403 | 595 | 378 | 18 | 181 | 746 | 99 | 674 | 2.39e-57 | 212 |
Msa0109110 | AT2G27110.2 | 26.074 | 675 | 429 | 19 | 130 | 785 | 7 | 630 | 1.55e-55 | 208 |
Msa0109110 | AT2G27110.1 | 26.074 | 675 | 429 | 19 | 130 | 785 | 7 | 630 | 1.55e-55 | 208 |
Msa0109110 | AT4G19990.1 | 26.981 | 530 | 335 | 9 | 240 | 759 | 39 | 526 | 2.74e-55 | 205 |
Msa0109110 | AT4G38170.1 | 28.645 | 391 | 261 | 8 | 354 | 734 | 18 | 400 | 9.73e-52 | 191 |
Msa0109110 | AT2G27110.3 | 27.191 | 445 | 302 | 9 | 353 | 785 | 51 | 485 | 3.00e-51 | 193 |
Msa0109110 | AT5G28530.1 | 26.481 | 574 | 384 | 13 | 183 | 732 | 61 | 620 | 3.67e-50 | 189 |
Msa0109110 | AT5G28530.3 | 26.481 | 574 | 380 | 13 | 183 | 732 | 61 | 616 | 8.23e-50 | 188 |
Msa0109110 | AT5G28530.2 | 26.481 | 574 | 380 | 13 | 183 | 732 | 61 | 616 | 8.23e-50 | 188 |
Msa0109110 | AT2G32250.8 | 24.627 | 402 | 294 | 3 | 369 | 765 | 144 | 541 | 1.19e-45 | 177 |
Msa0109110 | AT2G32250.2 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 1.26e-45 | 177 |
Msa0109110 | AT2G32250.4 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 1.26e-45 | 177 |
Msa0109110 | AT2G32250.7 | 24.627 | 402 | 294 | 3 | 369 | 765 | 144 | 541 | 1.35e-45 | 177 |
Msa0109110 | AT2G32250.6 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 1.88e-45 | 177 |
Msa0109110 | AT2G32250.1 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 1.88e-45 | 177 |
Msa0109110 | AT2G32250.3 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 1.88e-45 | 177 |
Msa0109110 | AT2G32250.5 | 24.627 | 402 | 294 | 3 | 369 | 765 | 185 | 582 | 3.59e-45 | 176 |
Msa0109110 | AT5G28530.4 | 23.971 | 559 | 354 | 13 | 183 | 732 | 61 | 557 | 1.66e-35 | 144 |
Msa0109110 | AT5G28530.5 | 23.971 | 559 | 350 | 13 | 183 | 732 | 61 | 553 | 4.06e-35 | 143 |
Msa0109110 | AT3G07500.1 | 38.235 | 136 | 74 | 5 | 150 | 282 | 8 | 136 | 1.88e-12 | 68.2 |
Find 214 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAATGCCTTTACTGATTT+TGG | 0.059598 | 1_3:+21073503 | Msa0109110:CDS |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 1_3:-21076379 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.095830 | 1_3:-21076481 | None:intergenic |
ATCCTCCTCCCACGTCTTTC+TGG | 0.104496 | 1_3:-21076277 | None:intergenic |
ATCCTTCTCCCACGTCTTTC+TGG | 0.118623 | 1_3:-21076175 | None:intergenic |
GCAAGCACTGAGCATCTTTC+TGG | 0.124164 | 1_3:+21076335 | Msa0109110:CDS |
AGGATGAATTTGAAGAGTTT+TGG | 0.187483 | 1_3:+21075052 | Msa0109110:CDS |
GACGTTTGAAATGTCTATTT+TGG | 0.234421 | 1_3:+21074632 | Msa0109110:CDS |
CACTCACAAACAGTTATATT+TGG | 0.234686 | 1_3:+21074772 | Msa0109110:CDS |
AATAAGAACTTGTCATATAA+TGG | 0.247315 | 1_3:+21074420 | Msa0109110:CDS |
CCCACGTCTTTCTGGCTATC+AGG | 0.264446 | 1_3:-21076167 | None:intergenic |
TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 1_3:+21074261 | Msa0109110:CDS |
TTCTTTGTTCTCATATGTTT+TGG | 0.278033 | 1_3:-21075121 | None:intergenic |
CCATCTGTTACAACTGCTTT+TGG | 0.282718 | 1_3:-21074877 | None:intergenic |
TGCATTTACACCCTGTTTAT+CGG | 0.290641 | 1_3:+21074347 | Msa0109110:CDS |
CCTGAAGTTCCAATTGTTAC+TGG | 0.294336 | 1_3:+21075867 | Msa0109110:CDS |
ATCCTTCTCCCACGTCTCTT+TGG | 0.296957 | 1_3:-21076073 | None:intergenic |
GGGGACTTGGTGAGGGAAAA+TGG | 0.297027 | 1_3:+21075075 | Msa0109110:CDS |
CTTGTTGCGTTGGACGAAAA+AGG | 0.298153 | 1_3:+21075662 | Msa0109110:CDS |
ACTTAACATTCAGATAGTTT+AGG | 0.298701 | 1_3:-21074561 | None:intergenic |
CTTAACATTCAGATAGTTTA+GGG | 0.312093 | 1_3:-21074560 | None:intergenic |
TTGCAGGGAAGTGTCCAAAA+AGG | 0.313369 | 1_3:+21075785 | Msa0109110:CDS |
AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 1_3:+21073731 | Msa0109110:CDS |
CATTAACTGCTGAAGGAATA+AGG | 0.318241 | 1_3:+21074005 | Msa0109110:CDS |
TGCTGAAGGAATAAGGAAAA+TGG | 0.318497 | 1_3:+21074012 | Msa0109110:CDS |
CCAGTAACAATTGGAACTTC+AGG | 0.318979 | 1_3:-21075867 | None:intergenic |
TTCTATGAGGGAGGCGATAA+AGG | 0.334895 | 1_3:+21074906 | Msa0109110:CDS |
TCCCATACAATCTAGAAAAC+TGG | 0.344570 | 1_3:-21074845 | None:intergenic |
CTATTAGGAAGAGTGATATT+AGG | 0.345442 | 1_3:+21074098 | Msa0109110:CDS |
CGCAACAAGATCAAACATTC+TGG | 0.354601 | 1_3:-21075648 | None:intergenic |
AAGAGTTATGTTAGGAAGAA+AGG | 0.363884 | 1_3:+21075228 | Msa0109110:CDS |
CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 1_3:-21074321 | None:intergenic |
TGCTCCAAAGAAGAATAAAA+AGG | 0.367722 | 1_3:+21075941 | Msa0109110:CDS |
TGGCTAGCATGCTGAGACAT+TGG | 0.368552 | 1_3:-21076359 | None:intergenic |
CCCACGTCTCTTTGGCTATC+GGG | 0.373225 | 1_3:-21076065 | None:intergenic |
AGATCAGATTATTTCTGCTT+TGG | 0.376852 | 1_3:+21074670 | Msa0109110:CDS |
GGAAGTAGATTCTAAGTTGA+TGG | 0.394286 | 1_3:+21075719 | Msa0109110:CDS |
GTTGAGTTTCCAGTAACAAT+TGG | 0.399158 | 1_3:-21075876 | None:intergenic |
TCCCACGTCTCTTTGGCTAT+CGG | 0.401616 | 1_3:-21076066 | None:intergenic |
ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 1_3:+21074421 | Msa0109110:CDS |
GGTACACCGGAACATGATTA+CGG | 0.407134 | 1_3:+21073524 | Msa0109110:CDS |
AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 1_3:+21074188 | Msa0109110:CDS |
CATAGACGATGACGCGTACT+TGG | 0.409842 | 1_3:-21074937 | None:intergenic |
CAAGCACTGAGCATCTTTCT+GGG | 0.411830 | 1_3:+21076336 | Msa0109110:CDS |
CAGCACAGGGGATGAAAACT+TGG | 0.418956 | 1_3:-21075331 | None:intergenic |
GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 1_3:+21073755 | Msa0109110:CDS |
TACCTGCGTGACGATTTCTT+TGG | 0.423240 | 1_3:+21075159 | Msa0109110:CDS |
TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 1_3:+21074070 | Msa0109110:CDS |
GGATGACATACAAAAGCTTC+GGG | 0.433073 | 1_3:+21075830 | Msa0109110:CDS |
GGAGCACCTTTGCACTTCAC+TGG | 0.435097 | 1_3:-21075924 | None:intergenic |
CAGTAACAATTGGAACTTCA+GGG | 0.439435 | 1_3:-21075866 | None:intergenic |
GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 1_3:+21074179 | Msa0109110:CDS |
AGACGTGGGAGGAGGATCAA+AGG | 0.446373 | 1_3:+21076283 | Msa0109110:CDS |
CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 1_3:+21075380 | Msa0109110:CDS |
GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 1_3:+21074112 | Msa0109110:CDS |
AAATCATAAAGAGTTATGTT+AGG | 0.452282 | 1_3:+21075220 | Msa0109110:CDS |
CTGCGTGACGATTTCTTTGG+TGG | 0.454197 | 1_3:+21075162 | Msa0109110:CDS |
ATGTTGACTGCTTGCAGCAC+AGG | 0.458698 | 1_3:-21076531 | None:intergenic |
TGGCTAGCATGCTAAGACAT+GGG | 0.460484 | 1_3:-21076563 | None:intergenic |
ACAAAATCACCAACGGATAG+TGG | 0.461754 | 1_3:-21074735 | None:intergenic |
TGGATGACATACAAAAGCTT+CGG | 0.464217 | 1_3:+21075829 | Msa0109110:CDS |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 1_3:-21076257 | None:intergenic |
TGGCTAGCATGCTGAGACAT+GGG | 0.464703 | 1_3:-21076461 | None:intergenic |
AAACATATCCGATCGTTGTT+GGG | 0.465026 | 1_3:+21073573 | Msa0109110:CDS |
TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 1_3:-21074247 | None:intergenic |
GATGAGCGATATGATGAAAC+TGG | 0.468588 | 1_3:+21073698 | Msa0109110:CDS |
TTGATGGAGATTGCTCGATA+TGG | 0.468688 | 1_3:+21075735 | Msa0109110:CDS |
AAAACATATCCGATCGTTGT+TGG | 0.473771 | 1_3:+21073572 | Msa0109110:CDS |
TTGGCTATCGGGCTGAGACA+TGG | 0.475904 | 1_3:-21076054 | None:intergenic |
TCTTGAATGTGGACTATTGT+GGG | 0.476439 | 1_3:+21075697 | Msa0109110:CDS |
GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 1_3:+21074382 | Msa0109110:CDS |
TGATTACGGTTCTACGGATG+TGG | 0.481654 | 1_3:+21073538 | Msa0109110:CDS |
ATTTGGTGCTGCATTGGTGA+TGG | 0.484577 | 1_3:+21074789 | Msa0109110:CDS |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 1_3:-21076258 | None:intergenic |
CTGGCTAGCATGCTGAGACA+TGG | 0.489602 | 1_3:-21076462 | None:intergenic |
TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 1_3:+21073746 | Msa0109110:CDS |
CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 1_3:-21075345 | None:intergenic |
GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 1_3:-21073530 | None:intergenic |
CGCGTCATCGTCTATGTGCT+TGG | 0.493517 | 1_3:+21074944 | Msa0109110:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 1_3:+21076079 | Msa0109110:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 1_3:+21076385 | Msa0109110:CDS |
AGACGTGGGAGAAGGATCAA+AGG | 0.494945 | 1_3:+21076487 | Msa0109110:CDS |
TTCTTGAATGTGGACTATTG+TGG | 0.497990 | 1_3:+21075696 | Msa0109110:CDS |
TAGCTTGTATGCTGATGTGC+TGG | 0.499229 | 1_3:+21075809 | Msa0109110:CDS |
GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 1_3:+21074150 | Msa0109110:CDS |
TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 1_3:+21073970 | Msa0109110:CDS |
TGGCTATCGGGCTGAGACAT+GGG | 0.505485 | 1_3:-21076053 | None:intergenic |
GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 1_3:+21073959 | Msa0109110:CDS |
CCTTTGCACTTCACTGGCAA+TGG | 0.506348 | 1_3:-21075918 | None:intergenic |
GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 1_3:+21075420 | Msa0109110:CDS |
GACGTGGGAGGAGGATCAAA+GGG | 0.511280 | 1_3:+21076284 | Msa0109110:CDS |
ATATGAGAACAAAGAATTGT+GGG | 0.511340 | 1_3:+21075128 | Msa0109110:CDS |
AAGAATACTCAAGGGAATAC+AGG | 0.512005 | 1_3:+21073674 | Msa0109110:CDS |
AGGGTGTAAATGCACATCAT+TGG | 0.512418 | 1_3:-21074338 | None:intergenic |
AGTGGCAGAATATTCACAAA+AGG | 0.514210 | 1_3:-21074602 | None:intergenic |
AGAGTGGATATCCCGGTGTT+GGG | 0.515690 | 1_3:+21074461 | Msa0109110:CDS |
TATCCGATCGTTGTTGGGAG+TGG | 0.515943 | 1_3:+21073578 | Msa0109110:CDS |
ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 1_3:+21073998 | Msa0109110:CDS |
TAACCCATGGATTGTTCTCA+AGG | 0.524044 | 1_3:-21075098 | None:intergenic |
GACGTGGGAGAAGGATCAAA+GGG | 0.526228 | 1_3:+21076080 | Msa0109110:CDS |
CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 1_3:-21073510 | None:intergenic |
AAGAGTGGATATCCCGGTGT+TGG | 0.530431 | 1_3:+21074460 | Msa0109110:CDS |
TGGCTATCAGGCTGAGACAT+GGG | 0.531630 | 1_3:-21076155 | None:intergenic |
AGTTATATTTGGTGCTGCAT+TGG | 0.533546 | 1_3:+21074783 | Msa0109110:CDS |
CAGCAATTCAGTGTTCGTGC+AGG | 0.535206 | 1_3:+21075553 | Msa0109110:CDS |
CAGATGGTGACGGTTCTATG+AGG | 0.536155 | 1_3:+21074893 | Msa0109110:CDS |
GCATCTGAACAAGAATGCTA+TGG | 0.538265 | 1_3:+21074966 | Msa0109110:CDS |
CCGATCGTTGTTGGGAGTGG+TGG | 0.539432 | 1_3:+21073581 | Msa0109110:CDS |
AGCCAGAAAGACGTGGGAGG+AGG | 0.544096 | 1_3:+21076275 | Msa0109110:CDS |
TTTATGAAATTCTATACGAT+GGG | 0.547975 | 1_3:+21075523 | Msa0109110:CDS |
GGAACATGATTACGGTTCTA+CGG | 0.552732 | 1_3:+21073532 | Msa0109110:CDS |
CATATGAGAACAAAGAATTG+TGG | 0.552735 | 1_3:+21075127 | Msa0109110:CDS |
ATGTGTGCTGTTATTAAGGA+TGG | 0.553864 | 1_3:+21074523 | Msa0109110:CDS |
TTGTCATATAATGGGATACA+TGG | 0.555297 | 1_3:+21074429 | Msa0109110:CDS |
AAACAATAGACACTTATATG+TGG | 0.556264 | 1_3:+21074815 | Msa0109110:CDS |
TTGGCTAGCATGCTAAGACA+TGG | 0.556417 | 1_3:-21076564 | None:intergenic |
AGCCAAAGAGACGTGGGAGA+AGG | 0.560631 | 1_3:+21076071 | Msa0109110:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.560631 | 1_3:+21076173 | Msa0109110:CDS |
GAAGATTTGTTTCTTGAATG+TGG | 0.561039 | 1_3:+21075686 | Msa0109110:CDS |
CTGGCTATCAGGCTGAGACA+TGG | 0.561329 | 1_3:-21076156 | None:intergenic |
TTCTTAGTGAACCCAACACC+GGG | 0.562418 | 1_3:-21074472 | None:intergenic |
CCACCACTCCCAACAACGAT+CGG | 0.562593 | 1_3:-21073581 | None:intergenic |
TGCAGGAAATTTGAATCTCG+AGG | 0.563863 | 1_3:+21075570 | Msa0109110:CDS |
GTTTATGAAATTCTATACGA+TGG | 0.564495 | 1_3:+21075522 | Msa0109110:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 1_3:+21076386 | Msa0109110:CDS |
GACGTGGGAGAAGGATCAAA+GGG | 0.564696 | 1_3:+21076488 | Msa0109110:CDS |
ATGGCCTTGAGAACAATCCA+TGG | 0.565243 | 1_3:+21075094 | Msa0109110:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 1_3:+21076377 | Msa0109110:CDS |
AGCCAGAAAGACGTGGGAGA+AGG | 0.570261 | 1_3:+21076479 | Msa0109110:CDS |
AATGTTTGATCTTGTTGCGT+TGG | 0.571747 | 1_3:+21075652 | Msa0109110:CDS |
TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 1_3:+21073975 | Msa0109110:CDS |
GCAGGAAATTTGAATCTCGA+GGG | 0.574935 | 1_3:+21075571 | Msa0109110:CDS |
AGAAAGGTGCTCAGTGCTTG+CGG | 0.575791 | 1_3:-21076129 | None:intergenic |
GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 1_3:-21075344 | None:intergenic |
GATGAAAGTGAAGGTGATGA+AGG | 0.577534 | 1_3:+21073839 | Msa0109110:CDS |
TACATGGTGGCTCAGAAGAG+TGG | 0.578271 | 1_3:+21074445 | Msa0109110:CDS |
GCCTGATAGCCAGAAAGACG+TGG | 0.578633 | 1_3:+21076166 | Msa0109110:CDS |
AGAAAGATGCTCAGTGCTTG+CGG | 0.581054 | 1_3:-21076333 | None:intergenic |
AATTATACGAAGAATACTCA+AGG | 0.584441 | 1_3:+21073665 | Msa0109110:CDS |
CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 1_3:+21074151 | Msa0109110:CDS |
GCCCGATAGCCAAAGAGACG+TGG | 0.586320 | 1_3:+21076064 | Msa0109110:CDS |
TTATTTCTGCTTTGGCGATG+TGG | 0.587488 | 1_3:+21074678 | Msa0109110:CDS |
GCTGAGACATGGGCACAGAA+AGG | 0.587789 | 1_3:-21076145 | None:intergenic |
CCAAAAGCAGTTGTAACAGA+TGG | 0.588696 | 1_3:+21074877 | Msa0109110:CDS |
GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 1_3:+21073815 | Msa0109110:CDS |
GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 1_3:+21073767 | Msa0109110:CDS |
GTAAGAAAATGCTCAAACTG+TGG | 0.589849 | 1_3:+21075975 | Msa0109110:CDS |
TGTAAATGCACATCATTGGT+TGG | 0.591074 | 1_3:-21074334 | None:intergenic |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 1_3:+21076268 | Msa0109110:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 1_3:+21076370 | Msa0109110:CDS |
GCATGCTAGCCAGAAAGACG+TGG | 0.591586 | 1_3:+21076472 | Msa0109110:CDS |
TTTCTTAGTGAACCCAACAC+CGG | 0.593472 | 1_3:-21074473 | None:intergenic |
GTTGACAAAATATCTTGAGG+AGG | 0.598346 | 1_3:+21075497 | Msa0109110:CDS |
GAATATTCTGCCACTGATGA+CGG | 0.599778 | 1_3:+21074610 | Msa0109110:CDS |
GAATATTCACAAAAGGAATG+TGG | 0.603006 | 1_3:-21074595 | None:intergenic |
AACAATAGACACTTATATGT+GGG | 0.603700 | 1_3:+21074816 | Msa0109110:CDS |
GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 1_3:+21073719 | Msa0109110:CDS |
AAAGGAATGTGGATCAGTTG+AGG | 0.611183 | 1_3:-21074584 | None:intergenic |
AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 1_3:-21074377 | None:intergenic |
CTGGCAATGGATCACGTATG+TGG | 0.614693 | 1_3:-21075905 | None:intergenic |
AGTGAAGGTCATGGTAGTGA+AGG | 0.614950 | 1_3:+21073920 | Msa0109110:CDS |
GCTCAGAAGAGTGGATATCC+CGG | 0.616332 | 1_3:+21074454 | Msa0109110:CDS |
TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 1_3:+21075362 | Msa0109110:CDS |
TGCACATCATTGGTTGGAGT+AGG | 0.617941 | 1_3:-21074328 | None:intergenic |
GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 1_3:+21073800 | Msa0109110:CDS |
AGATGGTGACGGTTCTATGA+GGG | 0.626993 | 1_3:+21074894 | Msa0109110:CDS |
GAAAGTGAAGGTGATGAAGG+TGG | 0.632263 | 1_3:+21073842 | Msa0109110:CDS |
TTTCAAACGTCCGTCATCAG+TGG | 0.632560 | 1_3:-21074620 | None:intergenic |
AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 1_3:+21074152 | Msa0109110:CDS |
TTGACAAAATATCTTGAGGA+GGG | 0.634347 | 1_3:+21075498 | Msa0109110:CDS |
TGTTACTGGAAACTCAACAA+TGG | 0.640006 | 1_3:+21075881 | Msa0109110:CDS |
CCCGATAGCCAAAGAGACGT+GGG | 0.644492 | 1_3:+21076065 | Msa0109110:CDS |
GAACAAATACCACTATCCGT+TGG | 0.644673 | 1_3:+21074726 | Msa0109110:CDS |
CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 1_3:+21074233 | Msa0109110:CDS |
TGGCCTTGAGAACAATCCAT+GGG | 0.647038 | 1_3:+21075095 | Msa0109110:CDS |
AGTGAAGGTGATGAAGGTGG+AGG | 0.647603 | 1_3:+21073845 | Msa0109110:CDS |
CAGGAAATTTGAATCTCGAG+GGG | 0.648693 | 1_3:+21075572 | Msa0109110:CDS |
GAAGTTGACAAAATATCTTG+AGG | 0.651334 | 1_3:+21075494 | Msa0109110:CDS |
CAAATATAACTGTTTGTGAG+TGG | 0.651904 | 1_3:-21074771 | None:intergenic |
TGGTGACGGTTCTATGAGGG+AGG | 0.661344 | 1_3:+21074897 | Msa0109110:CDS |
TATGAGGGAGGCGATAAAGG+CGG | 0.662119 | 1_3:+21074909 | Msa0109110:CDS |
CACCAAAGAAATCGTCACGC+AGG | 0.662756 | 1_3:-21075161 | None:intergenic |
ATTATACGAAGAATACTCAA+GGG | 0.665058 | 1_3:+21073666 | Msa0109110:CDS |
TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 1_3:+21073964 | Msa0109110:CDS |
GGTGATGAAAGTGAAGGTCA+TGG | 0.667300 | 1_3:+21073911 | Msa0109110:CDS |
TCATATAATGGGATACATGG+TGG | 0.669224 | 1_3:+21074432 | Msa0109110:CDS |
CAAAGGGAGGCAAATCAAAG+AGG | 0.670795 | 1_3:+21076300 | Msa0109110:CDS |
TTAACGGTGTGATTGTAATG+AGG | 0.672944 | 1_3:+21074128 | Msa0109110:CDS |
GATGATGATGATGTAAGTCA+TGG | 0.675630 | 1_3:+21073641 | Msa0109110:CDS |
CAGCCAGACAAAATCACCAA+CGG | 0.675882 | 1_3:-21074742 | None:intergenic |
CTTGAATGTGGACTATTGTG+GGG | 0.678410 | 1_3:+21075698 | Msa0109110:CDS |
CAAAGGGAGGAAAATCAAAG+AGG | 0.680357 | 1_3:+21076096 | Msa0109110:CDS |
AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 1_3:+21075440 | Msa0109110:CDS |
GCAGTTGTAACAGATGGTGA+CGG | 0.686599 | 1_3:+21074883 | Msa0109110:CDS |
CCTGATAGCCAGAAAGACGT+GGG | 0.690821 | 1_3:+21076167 | Msa0109110:CDS |
CCATTGCCAGTGAAGTGCAA+AGG | 0.692298 | 1_3:+21075918 | Msa0109110:CDS |
GCTAGCCAGAAAGACGTGGG+AGG | 0.694454 | 1_3:+21076272 | Msa0109110:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 1_3:+21076269 | Msa0109110:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 1_3:+21076371 | Msa0109110:CDS |
CATGCTAGCCAGAAAGACGT+GGG | 0.697336 | 1_3:+21076473 | Msa0109110:CDS |
AGTGAAGGTCATGCTAGTGA+AGG | 0.698593 | 1_3:+21073890 | Msa0109110:CDS |
GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 1_3:+21073860 | Msa0109110:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.703216 | 1_3:+21076491 | Msa0109110:CDS |
TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 1_3:+21074360 | Msa0109110:CDS |
GACAATGAAAGTGATGATGG+TGG | 0.706532 | 1_3:+21073722 | Msa0109110:CDS |
ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 1_3:+21074397 | Msa0109110:CDS |
GTGGGAGAAGGATCAAAGGG+AGG | 0.709029 | 1_3:+21076083 | Msa0109110:CDS |
GTGGGAGGAGGATCAAAGGG+AGG | 0.713504 | 1_3:+21076287 | Msa0109110:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 1_3:+21073875 | Msa0109110:CDS |
GATGAAGGTGATGAAAGTGA+AGG | 0.727165 | 1_3:+21073830 | Msa0109110:CDS |
AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 1_3:+21073791 | Msa0109110:CDS |
AGTGAAGGTGATGAAAGTGA+AGG | 0.741774 | 1_3:+21073905 | Msa0109110:CDS |
ACTTTGTACGAGTGATACGT+CGG | 0.754568 | 1_3:-21074222 | None:intergenic |
CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 1_3:-21075343 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TACGATTTTTATTATAAGTA+CGG | + | chr1_3:21074058-21074077 | Msa0109110:CDS | 15.0% |
!! | AATAAGAACTTGTCATATAA+TGG | + | chr1_3:21074420-21074439 | Msa0109110:CDS | 20.0% |
!! | ATAAGAACTTGTCATATAAT+GGG | + | chr1_3:21074421-21074440 | Msa0109110:CDS | 20.0% |
!! | AAATCATAAAGAGTTATGTT+AGG | + | chr1_3:21075220-21075239 | Msa0109110:CDS | 20.0% |
!! | TTTATGAAATTCTATACGAT+GGG | + | chr1_3:21075523-21075542 | Msa0109110:CDS | 20.0% |
!! | CTTCAACACAAAAAAAATAT+GGG | - | chr1_3:21075607-21075626 | None:intergenic | 20.0% |
! | AATTATACGAAGAATACTCA+AGG | + | chr1_3:21073665-21073684 | Msa0109110:CDS | 25.0% |
! | ATTATACGAAGAATACTCAA+GGG | + | chr1_3:21073666-21073685 | Msa0109110:CDS | 25.0% |
! | ATAAATTCATTAACTGCTGA+AGG | + | chr1_3:21073998-21074017 | Msa0109110:CDS | 25.0% |
!! | AAAAATGTGTGCTGTTATTA+AGG | + | chr1_3:21074519-21074538 | Msa0109110:CDS | 25.0% |
! | CTTAACATTCAGATAGTTTA+GGG | - | chr1_3:21074563-21074582 | None:intergenic | 25.0% |
! | ACTTAACATTCAGATAGTTT+AGG | - | chr1_3:21074564-21074583 | None:intergenic | 25.0% |
!!! | ACGTTTGAAATGTCTATTTT+GGG | + | chr1_3:21074633-21074652 | Msa0109110:CDS | 25.0% |
! | AAACAATAGACACTTATATG+TGG | + | chr1_3:21074815-21074834 | Msa0109110:CDS | 25.0% |
! | AACAATAGACACTTATATGT+GGG | + | chr1_3:21074816-21074835 | Msa0109110:CDS | 25.0% |
!!! | TGTCAAGAATTCAACTTTTT+TGG | + | chr1_3:21074993-21075012 | Msa0109110:CDS | 25.0% |
!!! | AAGAATTCAACTTTTTTGGA+AGG | + | chr1_3:21074997-21075016 | Msa0109110:CDS | 25.0% |
!! | AGCAATGTACTCTAATTTTA+CGG | + | chr1_3:21075029-21075048 | Msa0109110:CDS | 25.0% |
!! | TTCTTTGTTCTCATATGTTT+TGG | - | chr1_3:21075124-21075143 | None:intergenic | 25.0% |
! | ATATGAGAACAAAGAATTGT+GGG | + | chr1_3:21075128-21075147 | Msa0109110:CDS | 25.0% |
! | GTTTATGAAATTCTATACGA+TGG | + | chr1_3:21075522-21075541 | Msa0109110:CDS | 25.0% |
! | CCTTCAACACAAAAAAAATA+TGG | - | chr1_3:21075608-21075627 | None:intergenic | 25.0% |
!!! | CCATATTTTTTTTGTGTTGA+AGG | + | chr1_3:21075605-21075624 | Msa0109110:CDS | 25.0% |
!! | ATGTGTTTACAAATTTTTGC+AGG | + | chr1_3:21075769-21075788 | Msa0109110:CDS | 25.0% |
!! | TGTGTTTACAAATTTTTGCA+GGG | + | chr1_3:21075770-21075789 | Msa0109110:CDS | 25.0% |
!!! | AACAATGCCTTTACTGATTT+TGG | + | chr1_3:21073503-21073522 | Msa0109110:CDS | 30.0% |
TATAAGTACGGTAAGTGTAA+TGG | + | chr1_3:21074070-21074089 | Msa0109110:CDS | 30.0% | |
!!! | AGTGTAATGGTTTTGCTATT+AGG | + | chr1_3:21074083-21074102 | Msa0109110:CDS | 30.0% |
CTATTAGGAAGAGTGATATT+AGG | + | chr1_3:21074098-21074117 | Msa0109110:CDS | 30.0% | |
AGCATTTATCAAGGTTAGAT+AGG | + | chr1_3:21074188-21074207 | Msa0109110:CDS | 30.0% | |
! | ACAACATATCTACCCTTTTT+GGG | - | chr1_3:21074277-21074296 | None:intergenic | 30.0% |
!!! | TGTTGTGTCTATTTTTGAAG+AGG | + | chr1_3:21074291-21074310 | Msa0109110:CDS | 30.0% |
!!! | GTTGTGTCTATTTTTGAAGA+GGG | + | chr1_3:21074292-21074311 | Msa0109110:CDS | 30.0% |
! | TTGTCATATAATGGGATACA+TGG | + | chr1_3:21074429-21074448 | Msa0109110:CDS | 30.0% |
GAATATTCACAAAAGGAATG+TGG | - | chr1_3:21074598-21074617 | None:intergenic | 30.0% | |
!! | GACGTTTGAAATGTCTATTT+TGG | + | chr1_3:21074632-21074651 | Msa0109110:CDS | 30.0% |
!! | AGATCAGATTATTTCTGCTT+TGG | + | chr1_3:21074670-21074689 | Msa0109110:CDS | 30.0% |
CAAATATAACTGTTTGTGAG+TGG | - | chr1_3:21074774-21074793 | None:intergenic | 30.0% | |
CACTCACAAACAGTTATATT+TGG | + | chr1_3:21074772-21074791 | Msa0109110:CDS | 30.0% | |
! | ACCAGTTTTCTAGATTGTAT+GGG | + | chr1_3:21074844-21074863 | Msa0109110:CDS | 30.0% |
! | AATGTACTCTAATTTTACGG+AGG | + | chr1_3:21075032-21075051 | Msa0109110:CDS | 30.0% |
! | AGGATGAATTTGAAGAGTTT+TGG | + | chr1_3:21075052-21075071 | Msa0109110:CDS | 30.0% |
! | GGATGAATTTGAAGAGTTTT+GGG | + | chr1_3:21075053-21075072 | Msa0109110:CDS | 30.0% |
! | GATGAATTTGAAGAGTTTTG+GGG | + | chr1_3:21075054-21075073 | Msa0109110:CDS | 30.0% |
!! | ATGAATTTGAAGAGTTTTGG+GGG | + | chr1_3:21075055-21075074 | Msa0109110:CDS | 30.0% |
CATATGAGAACAAAGAATTG+TGG | + | chr1_3:21075127-21075146 | Msa0109110:CDS | 30.0% | |
AAGAGTTATGTTAGGAAGAA+AGG | + | chr1_3:21075228-21075247 | Msa0109110:CDS | 30.0% | |
GTGAAAGAAGAGATTATGAA+AGG | + | chr1_3:21075420-21075439 | Msa0109110:CDS | 30.0% | |
GAAGTTGACAAAATATCTTG+AGG | + | chr1_3:21075494-21075513 | Msa0109110:CDS | 30.0% | |
TTGACAAAATATCTTGAGGA+GGG | + | chr1_3:21075498-21075517 | Msa0109110:CDS | 30.0% | |
ACAAAAAAAATATGGGAGCA+TGG | - | chr1_3:21075600-21075619 | None:intergenic | 30.0% | |
! | GAAGATTTGTTTCTTGAATG+TGG | + | chr1_3:21075686-21075705 | Msa0109110:CDS | 30.0% |
TGCTCCAAAGAAGAATAAAA+AGG | + | chr1_3:21075941-21075960 | Msa0109110:CDS | 30.0% | |
! | GAGCATTTTCTTACAAACTT+TGG | - | chr1_3:21075969-21075988 | None:intergenic | 30.0% |
!!! | CTTTACTGATTTTGGTACAC+CGG | + | chr1_3:21073511-21073530 | Msa0109110:CDS | 35.0% |
AAAACATATCCGATCGTTGT+TGG | + | chr1_3:21073572-21073591 | Msa0109110:CDS | 35.0% | |
AAACATATCCGATCGTTGTT+GGG | + | chr1_3:21073573-21073592 | Msa0109110:CDS | 35.0% | |
! | GATGATGATGATGTAAGTCA+TGG | + | chr1_3:21073641-21073660 | Msa0109110:CDS | 35.0% |
AAGAATACTCAAGGGAATAC+AGG | + | chr1_3:21073674-21073693 | Msa0109110:CDS | 35.0% | |
!! | GATTATAGTGCTGGTGATAA+AGG | + | chr1_3:21073755-21073774 | Msa0109110:CDS | 35.0% |
! | GAAGATGATGATGTAGTTGT+TGG | + | chr1_3:21073959-21073978 | Msa0109110:CDS | 35.0% |
CATTAACTGCTGAAGGAATA+AGG | + | chr1_3:21074005-21074024 | Msa0109110:CDS | 35.0% | |
TGCTGAAGGAATAAGGAAAA+TGG | + | chr1_3:21074012-21074031 | Msa0109110:CDS | 35.0% | |
GATATTAGGCGCAATGTTAA+CGG | + | chr1_3:21074112-21074131 | Msa0109110:CDS | 35.0% | |
TTAACGGTGTGATTGTAATG+AGG | + | chr1_3:21074128-21074147 | Msa0109110:CDS | 35.0% | |
!! | GAGAGAAGAAGCATTTATCA+AGG | + | chr1_3:21074179-21074198 | Msa0109110:CDS | 35.0% |
! | CACAACATATCTACCCTTTT+TGG | - | chr1_3:21074278-21074297 | None:intergenic | 35.0% |
TGTAAATGCACATCATTGGT+TGG | - | chr1_3:21074337-21074356 | None:intergenic | 35.0% | |
TGCATTTACACCCTGTTTAT+CGG | + | chr1_3:21074347-21074366 | Msa0109110:CDS | 35.0% | |
! | CGGATATTTTCCGATAAACA+GGG | - | chr1_3:21074360-21074379 | None:intergenic | 35.0% |
! | TCGGATATTTTCCGATAAAC+AGG | - | chr1_3:21074361-21074380 | None:intergenic | 35.0% |
TGTTTATCGGAAAATATCCG+AGG | + | chr1_3:21074360-21074379 | Msa0109110:CDS | 35.0% | |
AATCTGTGCTTTATCTACCT+CGG | - | chr1_3:21074380-21074399 | None:intergenic | 35.0% | |
GTAGATAAAGCACAGATTGA+TGG | + | chr1_3:21074382-21074401 | Msa0109110:CDS | 35.0% | |
! | TCATATAATGGGATACATGG+TGG | + | chr1_3:21074432-21074451 | Msa0109110:CDS | 35.0% |
! | ATGTGTGCTGTTATTAAGGA+TGG | + | chr1_3:21074523-21074542 | Msa0109110:CDS | 35.0% |
AGTGGCAGAATATTCACAAA+AGG | - | chr1_3:21074605-21074624 | None:intergenic | 35.0% | |
!! | AAATGTCTATTTTGGGCAGA+TGG | + | chr1_3:21074640-21074659 | Msa0109110:CDS | 35.0% |
!! | AGTTATATTTGGTGCTGCAT+TGG | + | chr1_3:21074783-21074802 | Msa0109110:CDS | 35.0% |
! | GACCAGTTTTCTAGATTGTA+TGG | + | chr1_3:21074843-21074862 | Msa0109110:CDS | 35.0% |
TCCCATACAATCTAGAAAAC+TGG | - | chr1_3:21074848-21074867 | None:intergenic | 35.0% | |
!!! | TGAATTTGAAGAGTTTTGGG+GGG | + | chr1_3:21075056-21075075 | Msa0109110:CDS | 35.0% |
!!! | TCATATGTTTTGGTAACCCA+TGG | - | chr1_3:21075114-21075133 | None:intergenic | 35.0% |
!! | ATTTCTGCACAATTTTGACG+AGG | + | chr1_3:21075263-21075282 | Msa0109110:CDS | 35.0% |
GTGAAGGAAAAAGAAGTGAA+TGG | + | chr1_3:21075456-21075475 | Msa0109110:CDS | 35.0% | |
GTTGACAAAATATCTTGAGG+AGG | + | chr1_3:21075497-21075516 | Msa0109110:CDS | 35.0% | |
AATGTTTGATCTTGTTGCGT+TGG | + | chr1_3:21075652-21075671 | Msa0109110:CDS | 35.0% | |
! | TTCTTGAATGTGGACTATTG+TGG | + | chr1_3:21075696-21075715 | Msa0109110:CDS | 35.0% |
! | TCTTGAATGTGGACTATTGT+GGG | + | chr1_3:21075697-21075716 | Msa0109110:CDS | 35.0% |
! | GGAAGTAGATTCTAAGTTGA+TGG | + | chr1_3:21075719-21075738 | Msa0109110:CDS | 35.0% |
TGGATGACATACAAAAGCTT+CGG | + | chr1_3:21075829-21075848 | Msa0109110:CDS | 35.0% | |
CAGTAACAATTGGAACTTCA+GGG | - | chr1_3:21075869-21075888 | None:intergenic | 35.0% | |
GTTGAGTTTCCAGTAACAAT+TGG | - | chr1_3:21075879-21075898 | None:intergenic | 35.0% | |
TGTTACTGGAAACTCAACAA+TGG | + | chr1_3:21075881-21075900 | Msa0109110:CDS | 35.0% | |
! | GGTGCCTTTTTATTCTTCTT+TGG | - | chr1_3:21075948-21075967 | None:intergenic | 35.0% |
GTAAGAAAATGCTCAAACTG+TGG | + | chr1_3:21075975-21075994 | Msa0109110:CDS | 35.0% | |
CGGTGTACCAAAATCAGTAA+AGG | - | chr1_3:21073513-21073532 | None:intergenic | 40.0% | |
GTAGAACCGTAATCATGTTC+CGG | - | chr1_3:21073533-21073552 | None:intergenic | 40.0% | |
GGAACATGATTACGGTTCTA+CGG | + | chr1_3:21073532-21073551 | Msa0109110:CDS | 40.0% | |
GATGAGCGATATGATGAAAC+TGG | + | chr1_3:21073698-21073717 | Msa0109110:CDS | 40.0% | |
GGAGACAATGAAAGTGATGA+TGG | + | chr1_3:21073719-21073738 | Msa0109110:CDS | 40.0% | |
!! | GACAATGAAAGTGATGATGG+TGG | + | chr1_3:21073722-21073741 | Msa0109110:CDS | 40.0% |
TGTTCTGGTGATTATAGTGC+TGG | + | chr1_3:21073746-21073765 | Msa0109110:CDS | 40.0% | |
GGTGATAAAGGTGAAGATGA+TGG | + | chr1_3:21073767-21073786 | Msa0109110:CDS | 40.0% | |
AGTGAATGCGATGAAAGTCA+AGG | + | chr1_3:21073791-21073810 | Msa0109110:CDS | 40.0% | |
GATGAAAGTCAAGGTGATGA+AGG | + | chr1_3:21073800-21073819 | Msa0109110:CDS | 40.0% | |
GATGAAGGTGATGAAAGTGA+AGG | + | chr1_3:21073830-21073849 | Msa0109110:CDS | 40.0% | |
GATGAAAGTGAAGGTGATGA+AGG | + | chr1_3:21073839-21073858 | Msa0109110:CDS | 40.0% | |
AGTGAAGGTGATGAAAGTGA+AGG | + | chr1_3:21073875-21073894 | Msa0109110:CDS | 40.0% | |
AGTGAAGGTGATGAAAGTGA+AGG | + | chr1_3:21073875-21073894 | Msa0109110:CDS | 40.0% | |
! | TGATGATGTAGTTGTTGGTG+AGG | + | chr1_3:21073964-21073983 | Msa0109110:CDS | 40.0% |
! | TGTAGTTGTTGGTGAGGAAA+TGG | + | chr1_3:21073970-21073989 | Msa0109110:CDS | 40.0% |
! | TTGTTGGTGAGGAAATGGTA+AGG | + | chr1_3:21073975-21073994 | Msa0109110:CDS | 40.0% |
CAGTATGTATGCAACAAGCA+GGG | + | chr1_3:21074151-21074170 | Msa0109110:CDS | 40.0% | |
AGTATGTATGCAACAAGCAG+GGG | + | chr1_3:21074152-21074171 | Msa0109110:CDS | 40.0% | |
ACTTTGTACGAGTGATACGT+CGG | - | chr1_3:21074225-21074244 | None:intergenic | 40.0% | |
!! | TTTTGGGTCTGTAGTGAACA+CGG | - | chr1_3:21074261-21074280 | None:intergenic | 40.0% |
TGTTCACTACAGACCCAAAA+AGG | + | chr1_3:21074261-21074280 | Msa0109110:CDS | 40.0% | |
GTTCACTACAGACCCAAAAA+GGG | + | chr1_3:21074262-21074281 | Msa0109110:CDS | 40.0% | |
AGGGTGTAAATGCACATCAT+TGG | - | chr1_3:21074341-21074360 | None:intergenic | 40.0% | |
! | ATTGATGGTCTTCAGTCACA+CGG | + | chr1_3:21074397-21074416 | Msa0109110:CDS | 40.0% |
TTTCTTAGTGAACCCAACAC+CGG | - | chr1_3:21074476-21074495 | None:intergenic | 40.0% | |
AAAGGAATGTGGATCAGTTG+AGG | - | chr1_3:21074587-21074606 | None:intergenic | 40.0% | |
GAATATTCTGCCACTGATGA+CGG | + | chr1_3:21074610-21074629 | Msa0109110:CDS | 40.0% | |
!! | TTATTTCTGCTTTGGCGATG+TGG | + | chr1_3:21074678-21074697 | Msa0109110:CDS | 40.0% |
GAACAAATACCACTATCCGT+TGG | + | chr1_3:21074726-21074745 | Msa0109110:CDS | 40.0% | |
ACAAAATCACCAACGGATAG+TGG | - | chr1_3:21074738-21074757 | None:intergenic | 40.0% | |
!!! | TATCCGTTGGTGATTTTGTC+TGG | + | chr1_3:21074739-21074758 | Msa0109110:CDS | 40.0% |
! | CCATCTGTTACAACTGCTTT+TGG | - | chr1_3:21074880-21074899 | None:intergenic | 40.0% |
CCAAAAGCAGTTGTAACAGA+TGG | + | chr1_3:21074877-21074896 | Msa0109110:CDS | 40.0% | |
GCATCTGAACAAGAATGCTA+TGG | + | chr1_3:21074966-21074985 | Msa0109110:CDS | 40.0% | |
! | TAACCCATGGATTGTTCTCA+AGG | - | chr1_3:21075101-21075120 | None:intergenic | 40.0% |
!! | ACAATTTTGACGAGGCAATG+AGG | + | chr1_3:21075271-21075290 | Msa0109110:CDS | 40.0% |
!! | CAATTTTGACGAGGCAATGA+GGG | + | chr1_3:21075272-21075291 | Msa0109110:CDS | 40.0% |
!! | AATTTTGACGAGGCAATGAG+GGG | + | chr1_3:21075273-21075292 | Msa0109110:CDS | 40.0% |
TGCAGGAAATTTGAATCTCG+AGG | + | chr1_3:21075570-21075589 | Msa0109110:CDS | 40.0% | |
GCAGGAAATTTGAATCTCGA+GGG | + | chr1_3:21075571-21075590 | Msa0109110:CDS | 40.0% | |
CAGGAAATTTGAATCTCGAG+GGG | + | chr1_3:21075572-21075591 | Msa0109110:CDS | 40.0% | |
CGCAACAAGATCAAACATTC+TGG | - | chr1_3:21075651-21075670 | None:intergenic | 40.0% | |
! | CTTGAATGTGGACTATTGTG+GGG | + | chr1_3:21075698-21075717 | Msa0109110:CDS | 40.0% |
TTGATGGAGATTGCTCGATA+TGG | + | chr1_3:21075735-21075754 | Msa0109110:CDS | 40.0% | |
! | AGCATACAAGCTACCCTTTT+TGG | - | chr1_3:21075802-21075821 | None:intergenic | 40.0% |
GGATGACATACAAAAGCTTC+GGG | + | chr1_3:21075830-21075849 | Msa0109110:CDS | 40.0% | |
CCAGTAACAATTGGAACTTC+AGG | - | chr1_3:21075870-21075889 | None:intergenic | 40.0% | |
CCTGAAGTTCCAATTGTTAC+TGG | + | chr1_3:21075867-21075886 | Msa0109110:CDS | 40.0% | |
AAAAAGACGTTCAGTGTCTG+CGG | - | chr1_3:21076030-21076049 | None:intergenic | 40.0% | |
CAAAGGGAGGAAAATCAAAG+AGG | + | chr1_3:21076096-21076115 | Msa0109110:CDS | 40.0% | |
! | CAGCACAGGTCTTTTTCTTT+GGG | - | chr1_3:21076520-21076539 | None:intergenic | 40.0% |
GGTACACCGGAACATGATTA+CGG | + | chr1_3:21073524-21073543 | Msa0109110:CDS | 45.0% | |
TGATTACGGTTCTACGGATG+TGG | + | chr1_3:21073538-21073557 | Msa0109110:CDS | 45.0% | |
!! | AGTGATGATGGTGGTTGTTC+TGG | + | chr1_3:21073731-21073750 | Msa0109110:CDS | 45.0% |
GATGAAGGTGAACGTGATGA+AGG | + | chr1_3:21073815-21073834 | Msa0109110:CDS | 45.0% | |
GAAAGTGAAGGTGATGAAGG+TGG | + | chr1_3:21073842-21073861 | Msa0109110:CDS | 45.0% | |
AGTGAAGGTCATGCTAGTGA+AGG | + | chr1_3:21073890-21073909 | Msa0109110:CDS | 45.0% | |
GGTGATGAAAGTGAAGGTCA+TGG | + | chr1_3:21073881-21073900 | Msa0109110:CDS | 45.0% | |
! | AGTGAAGGTCATGGTAGTGA+AGG | + | chr1_3:21073920-21073939 | Msa0109110:CDS | 45.0% |
GCAGTATGTATGCAACAAGC+AGG | + | chr1_3:21074150-21074169 | Msa0109110:CDS | 45.0% | |
! | CATTGGTTGGAGTAGGTTCA+TGG | - | chr1_3:21074324-21074343 | None:intergenic | 45.0% |
! | TGCACATCATTGGTTGGAGT+AGG | - | chr1_3:21074331-21074350 | None:intergenic | 45.0% |
TTCTTAGTGAACCCAACACC+GGG | - | chr1_3:21074475-21074494 | None:intergenic | 45.0% | |
TTTCAAACGTCCGTCATCAG+TGG | - | chr1_3:21074623-21074642 | None:intergenic | 45.0% | |
CAGCCAGACAAAATCACCAA+CGG | - | chr1_3:21074745-21074764 | None:intergenic | 45.0% | |
!! | ATTTGGTGCTGCATTGGTGA+TGG | + | chr1_3:21074789-21074808 | Msa0109110:CDS | 45.0% |
GCAGTTGTAACAGATGGTGA+CGG | + | chr1_3:21074883-21074902 | Msa0109110:CDS | 45.0% | |
!! | AGATGGTGACGGTTCTATGA+GGG | + | chr1_3:21074894-21074913 | Msa0109110:CDS | 45.0% |
TTCTATGAGGGAGGCGATAA+AGG | + | chr1_3:21074906-21074925 | Msa0109110:CDS | 45.0% | |
! | ATGGCCTTGAGAACAATCCA+TGG | + | chr1_3:21075094-21075113 | Msa0109110:CDS | 45.0% |
! | TGGCCTTGAGAACAATCCAT+GGG | + | chr1_3:21075095-21075114 | Msa0109110:CDS | 45.0% |
TACCTGCGTGACGATTTCTT+TGG | + | chr1_3:21075159-21075178 | Msa0109110:CDS | 45.0% | |
CGAGGCTGCTGAAATCTATA+CGG | + | chr1_3:21075380-21075399 | Msa0109110:CDS | 45.0% | |
CTTGTTGCGTTGGACGAAAA+AGG | + | chr1_3:21075662-21075681 | Msa0109110:CDS | 45.0% | |
!! | TTGCAGGGAAGTGTCCAAAA+AGG | + | chr1_3:21075785-21075804 | Msa0109110:CDS | 45.0% |
!! | TGCAGGGAAGTGTCCAAAAA+GGG | + | chr1_3:21075786-21075805 | Msa0109110:CDS | 45.0% |
! | TAGCTTGTATGCTGATGTGC+TGG | + | chr1_3:21075809-21075828 | Msa0109110:CDS | 45.0% |
! | AGTGTCTGCGGAACATTTTC+TGG | - | chr1_3:21076018-21076037 | None:intergenic | 45.0% |
CAAAGGGAGGCAAATCAAAG+AGG | + | chr1_3:21076300-21076319 | Msa0109110:CDS | 45.0% | |
AGAAAGATGCTCAGTGCTTG+CGG | - | chr1_3:21076336-21076355 | None:intergenic | 45.0% | |
!! | CAAGCACTGAGCATCTTTCT+GGG | + | chr1_3:21076336-21076355 | Msa0109110:CDS | 45.0% |
! | GCAGCACAGGTCTTTTTCTT+TGG | - | chr1_3:21076521-21076540 | None:intergenic | 45.0% |
TATCCGATCGTTGTTGGGAG+TGG | + | chr1_3:21073578-21073597 | Msa0109110:CDS | 50.0% | |
AGTGAAGGTGATGAAGGTGG+AGG | + | chr1_3:21073845-21073864 | Msa0109110:CDS | 50.0% | |
GGTGGAGGTGATGAAAGTGA+AGG | + | chr1_3:21073860-21073879 | Msa0109110:CDS | 50.0% | |
! | CTCGTACAAAGTGTCCAGCT+AGG | + | chr1_3:21074233-21074252 | Msa0109110:CDS | 50.0% |
TACATGGTGGCTCAGAAGAG+TGG | + | chr1_3:21074445-21074464 | Msa0109110:CDS | 50.0% | |
GCTCAGAAGAGTGGATATCC+CGG | + | chr1_3:21074454-21074473 | Msa0109110:CDS | 50.0% | |
AAGAGTGGATATCCCGGTGT+TGG | + | chr1_3:21074460-21074479 | Msa0109110:CDS | 50.0% | |
AGAGTGGATATCCCGGTGTT+GGG | + | chr1_3:21074461-21074480 | Msa0109110:CDS | 50.0% | |
!! | CAGATGGTGACGGTTCTATG+AGG | + | chr1_3:21074893-21074912 | Msa0109110:CDS | 50.0% |
TATGAGGGAGGCGATAAAGG+CGG | + | chr1_3:21074909-21074928 | Msa0109110:CDS | 50.0% | |
CATAGACGATGACGCGTACT+TGG | - | chr1_3:21074940-21074959 | None:intergenic | 50.0% | |
!!! | TGAAGAGTTTTGGGGGGACT+TGG | + | chr1_3:21075062-21075081 | Msa0109110:CDS | 50.0% |
CACCAAAGAAATCGTCACGC+AGG | - | chr1_3:21075164-21075183 | None:intergenic | 50.0% | |
CTGCGTGACGATTTCTTTGG+TGG | + | chr1_3:21075162-21075181 | Msa0109110:CDS | 50.0% | |
CAGCACAGGGGATGAAAACT+TGG | - | chr1_3:21075334-21075353 | None:intergenic | 50.0% | |
CAGATGAGTTGTCAGCACAG+GGG | - | chr1_3:21075346-21075365 | None:intergenic | 50.0% | |
GCAGATGAGTTGTCAGCACA+GGG | - | chr1_3:21075347-21075366 | None:intergenic | 50.0% | |
! | AGGTGTTGCACTGAGTGTGA+AGG | + | chr1_3:21075440-21075459 | Msa0109110:CDS | 50.0% |
CAGCAATTCAGTGTTCGTGC+AGG | + | chr1_3:21075553-21075572 | Msa0109110:CDS | 50.0% | |
CTGGCAATGGATCACGTATG+TGG | - | chr1_3:21075908-21075927 | None:intergenic | 50.0% | |
CCTTTGCACTTCACTGGCAA+TGG | - | chr1_3:21075921-21075940 | None:intergenic | 50.0% | |
CCATTGCCAGTGAAGTGCAA+AGG | + | chr1_3:21075918-21075937 | Msa0109110:CDS | 50.0% | |
TCCCACGTCTCTTTGGCTAT+CGG | - | chr1_3:21076069-21076088 | None:intergenic | 50.0% | |
ATCCTTCTCCCACGTCTCTT+TGG | - | chr1_3:21076076-21076095 | None:intergenic | 50.0% | |
AGACGTGGGAGAAGGATCAA+AGG | + | chr1_3:21076079-21076098 | Msa0109110:CDS | 50.0% | |
GACGTGGGAGAAGGATCAAA+GGG | + | chr1_3:21076080-21076099 | Msa0109110:CDS | 50.0% | |
!! | AGAAAGGTGCTCAGTGCTTG+CGG | - | chr1_3:21076132-21076151 | None:intergenic | 50.0% |
TGGCTATCAGGCTGAGACAT+GGG | - | chr1_3:21076158-21076177 | None:intergenic | 50.0% | |
CCTGATAGCCAGAAAGACGT+GGG | + | chr1_3:21076167-21076186 | Msa0109110:CDS | 50.0% | |
ATCCTTCTCCCACGTCTTTC+TGG | - | chr1_3:21076178-21076197 | None:intergenic | 50.0% | |
TGGCTAGCATGCTGAGACAT+GGG | - | chr1_3:21076260-21076279 | None:intergenic | 50.0% | |
CATGCTAGCCAGAAAGACGT+GGG | + | chr1_3:21076269-21076288 | Msa0109110:CDS | 50.0% | |
!! | GCAAGCACTGAGCATCTTTC+TGG | + | chr1_3:21076335-21076354 | Msa0109110:CDS | 50.0% |
TGGCTAGCATGCTGAGACAT+TGG | - | chr1_3:21076260-21076279 | None:intergenic | 50.0% | |
CATGCTAGCCAGAAAGACGT+GGG | + | chr1_3:21076269-21076288 | Msa0109110:CDS | 50.0% | |
ATCCTTCTCCCACGTCTTTC+TGG | - | chr1_3:21076178-21076197 | None:intergenic | 50.0% | |
AGACGTGGGAGAAGGATCAA+AGG | + | chr1_3:21076079-21076098 | Msa0109110:CDS | 50.0% | |
GACGTGGGAGAAGGATCAAA+GGG | + | chr1_3:21076080-21076099 | Msa0109110:CDS | 50.0% | |
TGGCTAGCATGCTGAGACAT+GGG | - | chr1_3:21076260-21076279 | None:intergenic | 50.0% | |
CATGCTAGCCAGAAAGACGT+GGG | + | chr1_3:21076269-21076288 | Msa0109110:CDS | 50.0% | |
ATCCTTCTCCCACGTCTTTC+TGG | - | chr1_3:21076178-21076197 | None:intergenic | 50.0% | |
AGACGTGGGAGAAGGATCAA+AGG | + | chr1_3:21076079-21076098 | Msa0109110:CDS | 50.0% | |
GACGTGGGAGAAGGATCAAA+GGG | + | chr1_3:21076080-21076099 | Msa0109110:CDS | 50.0% | |
! | ATGTTGACTGCTTGCAGCAC+AGG | - | chr1_3:21076534-21076553 | None:intergenic | 50.0% |
CCACCACTCCCAACAACGAT+CGG | - | chr1_3:21073584-21073603 | None:intergenic | 55.0% | |
TAGTGAACACGGAGCCTAGC+TGG | - | chr1_3:21074250-21074269 | None:intergenic | 55.0% | |
!! | TGGTGACGGTTCTATGAGGG+AGG | + | chr1_3:21074897-21074916 | Msa0109110:CDS | 55.0% |
CGCGTCATCGTCTATGTGCT+TGG | + | chr1_3:21074944-21074963 | Msa0109110:CDS | 55.0% | |
!!! | AGTTTTGGGGGGACTTGGTG+AGG | + | chr1_3:21075067-21075086 | Msa0109110:CDS | 55.0% |
!!! | GTTTTGGGGGGACTTGGTGA+GGG | + | chr1_3:21075068-21075087 | Msa0109110:CDS | 55.0% |
!! | GGGGACTTGGTGAGGGAAAA+TGG | + | chr1_3:21075075-21075094 | Msa0109110:CDS | 55.0% |
CGCAGATGAGTTGTCAGCAC+AGG | - | chr1_3:21075348-21075367 | None:intergenic | 55.0% | |
TCTGCGTTGTCTTGAACGCG+AGG | + | chr1_3:21075362-21075381 | Msa0109110:CDS | 55.0% | |
! | GGAGCACCTTTGCACTTCAC+TGG | - | chr1_3:21075927-21075946 | None:intergenic | 55.0% |
TGGCTATCGGGCTGAGACAT+GGG | - | chr1_3:21076056-21076075 | None:intergenic | 55.0% | |
TTGGCTATCGGGCTGAGACA+TGG | - | chr1_3:21076057-21076076 | None:intergenic | 55.0% | |
CCCACGTCTCTTTGGCTATC+GGG | - | chr1_3:21076068-21076087 | None:intergenic | 55.0% | |
CCCGATAGCCAAAGAGACGT+GGG | + | chr1_3:21076065-21076084 | Msa0109110:CDS | 55.0% | |
AGCCAAAGAGACGTGGGAGA+AGG | + | chr1_3:21076071-21076090 | Msa0109110:CDS | 55.0% | |
GTGGGAGAAGGATCAAAGGG+AGG | + | chr1_3:21076083-21076102 | Msa0109110:CDS | 55.0% | |
GCTGAGACATGGGCACAGAA+AGG | - | chr1_3:21076148-21076167 | None:intergenic | 55.0% | |
CTGGCTATCAGGCTGAGACA+TGG | - | chr1_3:21076159-21076178 | None:intergenic | 55.0% | |
GCCTGATAGCCAGAAAGACG+TGG | + | chr1_3:21076166-21076185 | Msa0109110:CDS | 55.0% | |
!! | CCCACGTCTTTCTGGCTATC+AGG | - | chr1_3:21076170-21076189 | None:intergenic | 55.0% |
AGCCAGAAAGACGTGGGAGA+AGG | + | chr1_3:21076173-21076192 | Msa0109110:CDS | 55.0% | |
CTGGCTAGCATGCTGAGACA+TGG | - | chr1_3:21076261-21076280 | None:intergenic | 55.0% | |
GCATGCTAGCCAGAAAGACG+TGG | + | chr1_3:21076268-21076287 | Msa0109110:CDS | 55.0% | |
ATCCTCCTCCCACGTCTTTC+TGG | - | chr1_3:21076280-21076299 | None:intergenic | 55.0% | |
AGACGTGGGAGGAGGATCAA+AGG | + | chr1_3:21076283-21076302 | Msa0109110:CDS | 55.0% | |
GACGTGGGAGGAGGATCAAA+GGG | + | chr1_3:21076284-21076303 | Msa0109110:CDS | 55.0% | |
GCATGCTAGCCAGAAAGACG+TGG | + | chr1_3:21076268-21076287 | Msa0109110:CDS | 55.0% | |
AGCCAGAAAGACGTGGGAGA+AGG | + | chr1_3:21076173-21076192 | Msa0109110:CDS | 55.0% | |
CTGGCTAGCATGCTGAGACA+TGG | - | chr1_3:21076261-21076280 | None:intergenic | 55.0% | |
GCATGCTAGCCAGAAAGACG+TGG | + | chr1_3:21076268-21076287 | Msa0109110:CDS | 55.0% | |
AGCCAGAAAGACGTGGGAGA+AGG | + | chr1_3:21076173-21076192 | Msa0109110:CDS | 55.0% | |
GTGGGAGAAGGATCAAAGGG+AGG | + | chr1_3:21076083-21076102 | Msa0109110:CDS | 55.0% | |
CCGATCGTTGTTGGGAGTGG+TGG | + | chr1_3:21073581-21073600 | Msa0109110:CDS | 60.0% | |
GCCCGATAGCCAAAGAGACG+TGG | + | chr1_3:21076064-21076083 | Msa0109110:CDS | 60.0% | |
GCTAGCCAGAAAGACGTGGG+AGG | + | chr1_3:21076272-21076291 | Msa0109110:CDS | 60.0% | |
AGCCAGAAAGACGTGGGAGG+AGG | + | chr1_3:21076275-21076294 | Msa0109110:CDS | 60.0% | |
GTGGGAGGAGGATCAAAGGG+AGG | + | chr1_3:21076287-21076306 | Msa0109110:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 21073491 | 21076574 | 21073491 | ID=Msa0109110;Name=Msa0109110 |
chr1_3 | mRNA | 21073491 | 21076574 | 21073491 | ID=Msa0109110-mRNA-1;Parent=Msa0109110;Name=Msa0109110-mRNA-1;_AED=0.22;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|1027 |
chr1_3 | exon | 21073491 | 21076574 | 21073491 | ID=Msa0109110-mRNA-1:exon:7532;Parent=Msa0109110-mRNA-1 |
chr1_3 | CDS | 21073491 | 21076574 | 21073491 | ID=Msa0109110-mRNA-1:cds;Parent=Msa0109110-mRNA-1 |
Gene Sequence |
Protein sequence |