AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0109910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109910 MtrunA17_Chr4g0025531 63.821 246 72 4 1 241 1 234 6.64e-95 278
Msa0109910 MtrunA17_Chr3g0135891 51.261 119 51 3 106 218 16 133 1.37e-26 100
Msa0109910 MtrunA17_Chr3g0085241 54.286 70 32 0 4 73 36 105 1.36e-17 79.3
Msa0109910 MtrunA17_Chr3g0119901 52.055 73 35 0 1 73 1 73 1.82e-17 78.2
Msa0109910 MtrunA17_Chr1g0149391 44.048 84 42 1 1 79 1 84 2.82e-16 75.5
Msa0109910 MtrunA17_Chr1g0206991 47.222 72 38 0 1 72 1 72 4.06e-16 73.9
Msa0109910 MtrunA17_Chr2g0317481 39.216 102 58 2 2 100 3 103 4.92e-16 74.7
Msa0109910 MtrunA17_Chr2g0317451 39.216 102 58 2 2 100 3 103 5.28e-16 74.7
Msa0109910 MtrunA17_Chr3g0099421 50.000 72 36 0 1 72 26 97 5.61e-16 75.1
Msa0109910 MtrunA17_Chr8g0355091 47.222 72 38 0 1 72 1 72 7.01e-16 74.3
Msa0109910 MtrunA17_Chr8g0379021 33.607 122 63 1 4 107 7 128 7.16e-16 73.2
Msa0109910 MtrunA17_Chr1g0206701 47.222 72 38 0 1 72 1 72 9.89e-16 73.9
Msa0109910 MtrunA17_Chr3g0099411 47.222 72 38 0 1 72 1 72 1.03e-15 73.6
Msa0109910 MtrunA17_Chr1g0208581 45.833 72 39 0 1 72 1 72 1.24e-15 73.6
Msa0109910 MtrunA17_Chr3g0089141 44.444 72 40 0 1 72 1 72 1.66e-15 73.2
Msa0109910 MtrunA17_Chr1g0206721 47.222 72 38 0 1 72 1 72 1.67e-15 73.2
Msa0109910 MtrunA17_Chr1g0208561 44.444 72 40 0 1 72 1 72 1.82e-15 73.2
Msa0109910 MtrunA17_Chr2g0292791 47.222 72 38 0 1 72 1 72 2.53e-15 72.8
Msa0109910 MtrunA17_Chr5g0422421 44.444 72 40 0 1 72 1 72 3.71e-15 72.4
Msa0109910 MtrunA17_Chr1g0188671 45.833 72 39 0 1 72 39 110 3.99e-15 72.8
Msa0109910 MtrunA17_Chr2g0333981 38.667 75 46 0 4 78 7 81 1.08e-14 69.7
Msa0109910 MtrunA17_Chr4g0052061 40.816 98 54 2 9 106 2 95 1.11e-14 69.3
Msa0109910 MtrunA17_Chr5g0422941 29.412 136 85 3 1 126 1 135 1.28e-14 70.9
Msa0109910 MtrunA17_Chr5g0419601 44.444 72 40 0 1 72 1 72 1.53e-14 70.9
Msa0109910 MtrunA17_Chr4g0052081 43.478 69 39 0 9 77 2 70 3.04e-14 68.6
Msa0109910 MtrunA17_Chr2g0325971 43.056 72 41 0 1 72 1 72 6.97e-14 68.6
Msa0109910 MtrunA17_Chr3g0089151 39.326 89 50 1 1 85 1 89 8.19e-14 66.2
Msa0109910 MtrunA17_Chr1g0187361 41.667 72 42 0 1 72 1 72 1.49e-13 67.8
Msa0109910 MtrunA17_Chr2g0300441 25.463 216 131 5 5 199 5 211 1.75e-13 67.8
Msa0109910 MtrunA17_Chr2g0300421 38.961 77 47 0 1 77 1 77 1.85e-13 66.6
Msa0109910 MtrunA17_Chr8g0376821 38.889 72 44 0 9 80 2 73 6.18e-13 65.1
Msa0109910 MtrunA17_Chr1g0175611 40.000 70 42 0 9 78 2 71 1.05e-12 64.3
Msa0109910 MtrunA17_Chr1g0169761 38.889 72 44 0 9 80 2 73 1.38e-12 64.3
Msa0109910 MtrunA17_Chr8g0356071 29.801 151 89 3 9 156 2 138 1.49e-12 63.9
Msa0109910 MtrunA17_Chr3g0111841 48.276 58 30 0 15 72 2 59 1.60e-12 61.2
Msa0109910 MtrunA17_Chr8g0357771 37.500 72 45 0 9 80 2 73 5.24e-12 62.8
Msa0109910 MtrunA17_Chr1g0180591 37.500 72 45 0 9 80 2 73 5.77e-12 62.4
Msa0109910 MtrunA17_Chr4g0018951 29.134 127 84 3 26 148 29 153 8.67e-12 61.6
Msa0109910 MtrunA17_Chr1g0175601 40.000 65 39 0 9 73 2 66 1.20e-11 61.6
Msa0109910 MtrunA17_Chr4g0060841 37.500 112 54 2 9 120 2 97 1.42e-11 63.5
Msa0109910 MtrunA17_Chr4g0074101 36.111 72 46 0 9 80 2 73 2.92e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109910 AT4G36590.1 35.119 168 92 6 5 157 3 168 4.35e-19 83.6
Msa0109910 AT1G29962.1 50.000 80 39 1 1 80 1 79 5.65e-18 79.3
Msa0109910 AT2G34440.1 33.125 160 95 4 9 156 2 161 1.12e-17 78.2
Msa0109910 AT2G24840.1 45.000 80 44 0 7 86 61 140 4.76e-16 75.5
Msa0109910 AT1G28460.1 49.351 77 38 1 1 77 1 76 7.87e-16 73.6
Msa0109910 AT5G60440.1 47.059 68 36 0 5 72 3 70 5.40e-14 70.5
Msa0109910 AT1G28450.1 45.000 80 43 1 1 80 1 79 1.02e-13 67.8
Msa0109910 AT1G01530.1 35.714 98 59 1 5 98 3 100 2.43e-13 67.8
Msa0109910 AT3G66656.1 44.615 65 36 0 9 73 2 66 6.94e-13 65.5
Msa0109910 AT1G65360.1 42.188 64 37 0 9 72 7 70 3.35e-12 64.3
Msa0109910 AT3G04100.1 39.130 69 42 0 5 73 10 78 1.14e-11 62.8

Find 33 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGAGTTATCAACACTTTC+TGG 0.133767 1_3:-22027404 Msa0109910:CDS
GATGGTTCTCCATAACAAAA+TGG 0.328060 1_3:+22027341 None:intergenic
TTGAAGATACTGAAAAGTTC+TGG 0.347202 1_3:-22027173 Msa0109910:CDS
AAATCCTCCTTATGCCTTTG+AGG 0.374783 1_3:-22026870 Msa0109910:CDS
CTTCAAACTAGTTCTTGTAA+TGG 0.376223 1_3:+22027310 None:intergenic
CTGAGTTATCAACACTTTCT+GGG 0.391775 1_3:-22027403 Msa0109910:CDS
TACTGAAAAGTTCTGGCTAT+TGG 0.398285 1_3:-22027166 Msa0109910:CDS
CTTGTAATGGATTCAGAAGA+TGG 0.408810 1_3:+22027323 None:intergenic
CTTCCATTGAAGAACTGAAT+GGG 0.415431 1_3:-22026901 Msa0109910:CDS
TTTCCTCTTGATGTCCTCTT+CGG 0.424395 1_3:+22027515 None:intergenic
GAAATTCACACATCTTTAGT+TGG 0.427085 1_3:-22027095 Msa0109910:CDS
TGAAAATTCTTCAATAGAAG+AGG 0.433445 1_3:-22027285 Msa0109910:CDS
GACCCCATTCAGTTCTTCAA+TGG 0.451368 1_3:+22026898 None:intergenic
CATTACAAGAACTAGTTTGA+AGG 0.460657 1_3:-22027309 Msa0109910:CDS
TCTTCCATTGAAGAACTGAA+TGG 0.465605 1_3:-22026902 Msa0109910:CDS
TTGTTGTCCTCAAAGGCATA+AGG 0.500734 1_3:+22026863 None:intergenic
ACCTTGGTTGTTGTCCTCAA+AGG 0.504711 1_3:+22026856 None:intergenic
TTGAACCAACTTCATGACCT+TGG 0.511400 1_3:+22026840 None:intergenic
TGATCCAAAAGGTAAAGGTA+AGG 0.518700 1_3:-22026532 Msa0109910:intron
GTCGATCTTGCTGATACAAG+TGG 0.553932 1_3:-22026465 Msa0109910:CDS
GAAAATTCTTCAATAGAAGA+GGG 0.568036 1_3:-22027284 Msa0109910:CDS
AGTGGAATAGAGTATGAAAG+TGG 0.572846 1_3:-22026447 Msa0109910:CDS
TGCTATTGCTTCTAATGACA+TGG 0.574048 1_3:-22026508 Msa0109910:CDS
AACAACCAAGGTCATGAAGT+TGG 0.575956 1_3:-22026845 Msa0109910:CDS
TGGCTATTGGTCGATTCAAG+AGG 0.591337 1_3:-22027153 Msa0109910:CDS
GGAGGAGAGATTGACTCTCA+TGG 0.597639 1_3:-22027050 Msa0109910:intron
TGAGTTATCAACACTTTCTG+GGG 0.601370 1_3:-22027402 Msa0109910:CDS
TTCCATTGAAGAACTGAATG+GGG 0.615741 1_3:-22026900 Msa0109910:CDS
GCCTTTGAGGACAACAACCA+AGG 0.633204 1_3:-22026857 Msa0109910:CDS
TTGTCCTCAAAGGCATAAGG+AGG 0.639612 1_3:+22026866 None:intergenic
GGTCCGAAGAGGACATCAAG+AGG 0.645593 1_3:-22027518 Msa0109910:CDS
GTTGAATAAACTGCATGCTG+CGG 0.678893 1_3:-22027213 Msa0109910:CDS
AAAGTCTGGTATTTACAACA+AGG 0.698329 1_3:-22027429 Msa0109910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATATAACATATGTT+AGG + chr1_3:22027364-22027383 None:intergenic 10.0%
!!! TATATTTTTTTTTACTTTCA+TGG - chr1_3:22027373-22027392 Msa0109910:CDS 10.0%
!! AAAAAAATATAACATATGTT+AGG + chr1_3:22027364-22027383 None:intergenic 10.0%
!!! TATATTTTTTTTTACTTTCA+TGG - chr1_3:22027373-22027392 Msa0109910:CDS 10.0%
!! GTCTTAAATAAATTGAAAAA+AGG - chr1_3:22026869-22026888 Msa0109910:CDS 15.0%
!! TTAAATAAATTGAAAAAAGG+AGG - chr1_3:22026872-22026891 Msa0109910:CDS 15.0%
!! CTAATTAATTTAAGTGAAAT+TGG - chr1_3:22026994-22027013 Msa0109910:intron 15.0%
!! GTCTTAAATAAATTGAAAAA+AGG - chr1_3:22026869-22026888 Msa0109910:CDS 15.0%
!! TTAAATAAATTGAAAAAAGG+AGG - chr1_3:22026872-22026891 Msa0109910:CDS 15.0%
!! CTAATTAATTTAAGTGAAAT+TGG - chr1_3:22026994-22027013 Msa0109910:intron 15.0%
!!! TTTCTTTTACTTGATCATAT+TGG + chr1_3:22026829-22026848 None:intergenic 20.0%
!! ACATATTAATTCCCATTAAT+AGG - chr1_3:22027301-22027320 Msa0109910:CDS 20.0%
!!! TTTCTTTTACTTGATCATAT+TGG + chr1_3:22026829-22026848 None:intergenic 20.0%
!! ACATATTAATTCCCATTAAT+AGG - chr1_3:22027301-22027320 Msa0109910:CDS 20.0%
! TGAAAATTCTTCAATAGAAG+AGG - chr1_3:22026655-22026674 Msa0109910:intron 25.0%
! GAAAATTCTTCAATAGAAGA+GGG - chr1_3:22026656-22026675 Msa0109910:intron 25.0%
! CCTATAAGTGTAACTTAAAA+TGG + chr1_3:22027263-22027282 None:intergenic 25.0%
!!! CCATTTTAAGTTACACTTAT+AGG - chr1_3:22027260-22027279 Msa0109910:CDS 25.0%
!!! TTAAACCATTTTGATCCAAA+AGG - chr1_3:22027397-22027416 Msa0109910:CDS 25.0%
! TGAAAATTCTTCAATAGAAG+AGG - chr1_3:22026655-22026674 Msa0109910:intron 25.0%
! GAAAATTCTTCAATAGAAGA+GGG - chr1_3:22026656-22026675 Msa0109910:intron 25.0%
! CCTATAAGTGTAACTTAAAA+TGG + chr1_3:22027263-22027282 None:intergenic 25.0%
!!! CCATTTTAAGTTACACTTAT+AGG - chr1_3:22027260-22027279 Msa0109910:CDS 25.0%
!!! TTAAACCATTTTGATCCAAA+AGG - chr1_3:22027397-22027416 Msa0109910:CDS 25.0%
AAAGTCTGGTATTTACAACA+AGG - chr1_3:22026511-22026530 Msa0109910:CDS 30.0%
! TAACAAAATGGTTTTCCAGT+TGG + chr1_3:22026590-22026609 None:intergenic 30.0%
! ACTGGAAAACCATTTTGTTA+TGG - chr1_3:22026590-22026609 Msa0109910:intron 30.0%
! CTTCAAACTAGTTCTTGTAA+TGG + chr1_3:22026633-22026652 None:intergenic 30.0%
! CATTACAAGAACTAGTTTGA+AGG - chr1_3:22026631-22026650 Msa0109910:intron 30.0%
TTGAAGATACTGAAAAGTTC+TGG - chr1_3:22026767-22026786 Msa0109910:intron 30.0%
GAAATTCACACATCTTTAGT+TGG - chr1_3:22026845-22026864 Msa0109910:CDS 30.0%
TCTTCTTACTAACTATGTGT+TGG - chr1_3:22026923-22026942 Msa0109910:intron 30.0%
ATGTTTGCATGCCTATTAAT+GGG + chr1_3:22027315-22027334 None:intergenic 30.0%
AATGTTTGCATGCCTATTAA+TGG + chr1_3:22027316-22027335 None:intergenic 30.0%
! CTTTACCTTTTGGATCAAAA+TGG + chr1_3:22027405-22027424 None:intergenic 30.0%
!! CATTTTGATCCAAAAGGTAA+AGG - chr1_3:22027403-22027422 Msa0109910:CDS 30.0%
AAAGTCTGGTATTTACAACA+AGG - chr1_3:22026511-22026530 Msa0109910:CDS 30.0%
! TAACAAAATGGTTTTCCAGT+TGG + chr1_3:22026590-22026609 None:intergenic 30.0%
! ACTGGAAAACCATTTTGTTA+TGG - chr1_3:22026590-22026609 Msa0109910:intron 30.0%
! CTTCAAACTAGTTCTTGTAA+TGG + chr1_3:22026633-22026652 None:intergenic 30.0%
! CATTACAAGAACTAGTTTGA+AGG - chr1_3:22026631-22026650 Msa0109910:intron 30.0%
TTGAAGATACTGAAAAGTTC+TGG - chr1_3:22026767-22026786 Msa0109910:intron 30.0%
GAAATTCACACATCTTTAGT+TGG - chr1_3:22026845-22026864 Msa0109910:CDS 30.0%
TCTTCTTACTAACTATGTGT+TGG - chr1_3:22026923-22026942 Msa0109910:intron 30.0%
ATGTTTGCATGCCTATTAAT+GGG + chr1_3:22027315-22027334 None:intergenic 30.0%
AATGTTTGCATGCCTATTAA+TGG + chr1_3:22027316-22027335 None:intergenic 30.0%
! CTTTACCTTTTGGATCAAAA+TGG + chr1_3:22027405-22027424 None:intergenic 30.0%
!! CATTTTGATCCAAAAGGTAA+AGG - chr1_3:22027403-22027422 Msa0109910:CDS 30.0%
TCTGAGTTATCAACACTTTC+TGG - chr1_3:22026536-22026555 Msa0109910:intron 35.0%
CTGAGTTATCAACACTTTCT+GGG - chr1_3:22026537-22026556 Msa0109910:intron 35.0%
TGAGTTATCAACACTTTCTG+GGG - chr1_3:22026538-22026557 Msa0109910:intron 35.0%
! ATTCTCATGTTTTCTCCAAC+TGG - chr1_3:22026572-22026591 Msa0109910:intron 35.0%
GATGGTTCTCCATAACAAAA+TGG + chr1_3:22026602-22026621 None:intergenic 35.0%
!! CTTGTAATGGATTCAGAAGA+TGG + chr1_3:22026620-22026639 None:intergenic 35.0%
! TACTGAAAAGTTCTGGCTAT+TGG - chr1_3:22026774-22026793 Msa0109910:intron 35.0%
TCTTCCATTGAAGAACTGAA+TGG - chr1_3:22027038-22027057 Msa0109910:intron 35.0%
CTTCCATTGAAGAACTGAAT+GGG - chr1_3:22027039-22027058 Msa0109910:intron 35.0%
TTCCATTGAAGAACTGAATG+GGG - chr1_3:22027040-22027059 Msa0109910:intron 35.0%
TGATCCAAAAGGTAAAGGTA+AGG - chr1_3:22027408-22027427 Msa0109910:CDS 35.0%
TGCTATTGCTTCTAATGACA+TGG - chr1_3:22027432-22027451 Msa0109910:CDS 35.0%
AGTGGAATAGAGTATGAAAG+TGG - chr1_3:22027493-22027512 Msa0109910:CDS 35.0%
TCTGAGTTATCAACACTTTC+TGG - chr1_3:22026536-22026555 Msa0109910:intron 35.0%
CTGAGTTATCAACACTTTCT+GGG - chr1_3:22026537-22026556 Msa0109910:intron 35.0%
TGAGTTATCAACACTTTCTG+GGG - chr1_3:22026538-22026557 Msa0109910:intron 35.0%
! ATTCTCATGTTTTCTCCAAC+TGG - chr1_3:22026572-22026591 Msa0109910:intron 35.0%
GATGGTTCTCCATAACAAAA+TGG + chr1_3:22026602-22026621 None:intergenic 35.0%
!! CTTGTAATGGATTCAGAAGA+TGG + chr1_3:22026620-22026639 None:intergenic 35.0%
! TACTGAAAAGTTCTGGCTAT+TGG - chr1_3:22026774-22026793 Msa0109910:intron 35.0%
TCTTCCATTGAAGAACTGAA+TGG - chr1_3:22027038-22027057 Msa0109910:intron 35.0%
CTTCCATTGAAGAACTGAAT+GGG - chr1_3:22027039-22027058 Msa0109910:intron 35.0%
TTCCATTGAAGAACTGAATG+GGG - chr1_3:22027040-22027059 Msa0109910:intron 35.0%
TGATCCAAAAGGTAAAGGTA+AGG - chr1_3:22027408-22027427 Msa0109910:CDS 35.0%
TGCTATTGCTTCTAATGACA+TGG - chr1_3:22027432-22027451 Msa0109910:CDS 35.0%
AGTGGAATAGAGTATGAAAG+TGG - chr1_3:22027493-22027512 Msa0109910:CDS 35.0%
TTTCCTCTTGATGTCCTCTT+CGG + chr1_3:22026428-22026447 None:intergenic 40.0%
GTTGAATAAACTGCATGCTG+CGG - chr1_3:22026727-22026746 Msa0109910:intron 40.0%
AAATCCTCCTTATGCCTTTG+AGG - chr1_3:22027070-22027089 Msa0109910:CDS 40.0%
! TTGTTGTCCTCAAAGGCATA+AGG + chr1_3:22027080-22027099 None:intergenic 40.0%
AACAACCAAGGTCATGAAGT+TGG - chr1_3:22027095-22027114 Msa0109910:CDS 40.0%
TTGAACCAACTTCATGACCT+TGG + chr1_3:22027103-22027122 None:intergenic 40.0%
GAGAGATATTTGATGTGTGG+AGG + chr1_3:22027227-22027246 None:intergenic 40.0%
CTCGAGAGATATTTGATGTG+TGG + chr1_3:22027230-22027249 None:intergenic 40.0%
! GCAACCTTACCTTTACCTTT+TGG + chr1_3:22027415-22027434 None:intergenic 40.0%
TTTCCTCTTGATGTCCTCTT+CGG + chr1_3:22026428-22026447 None:intergenic 40.0%
GTTGAATAAACTGCATGCTG+CGG - chr1_3:22026727-22026746 Msa0109910:intron 40.0%
AAATCCTCCTTATGCCTTTG+AGG - chr1_3:22027070-22027089 Msa0109910:CDS 40.0%
! TTGTTGTCCTCAAAGGCATA+AGG + chr1_3:22027080-22027099 None:intergenic 40.0%
AACAACCAAGGTCATGAAGT+TGG - chr1_3:22027095-22027114 Msa0109910:CDS 40.0%
TTGAACCAACTTCATGACCT+TGG + chr1_3:22027103-22027122 None:intergenic 40.0%
GAGAGATATTTGATGTGTGG+AGG + chr1_3:22027227-22027246 None:intergenic 40.0%
CTCGAGAGATATTTGATGTG+TGG + chr1_3:22027230-22027249 None:intergenic 40.0%
! GCAACCTTACCTTTACCTTT+TGG + chr1_3:22027415-22027434 None:intergenic 40.0%
! GCGTTTTCAACGAGAAAGTC+TGG - chr1_3:22026497-22026516 Msa0109910:CDS 45.0%
! TGGCTATTGGTCGATTCAAG+AGG - chr1_3:22026787-22026806 Msa0109910:intron 45.0%
GACCCCATTCAGTTCTTCAA+TGG + chr1_3:22027045-22027064 None:intergenic 45.0%
! TTGTCCTCAAAGGCATAAGG+AGG + chr1_3:22027077-22027096 None:intergenic 45.0%
ACCTTGGTTGTTGTCCTCAA+AGG + chr1_3:22027087-22027106 None:intergenic 45.0%
GTCGATCTTGCTGATACAAG+TGG - chr1_3:22027475-22027494 Msa0109910:CDS 45.0%
! GCGTTTTCAACGAGAAAGTC+TGG - chr1_3:22026497-22026516 Msa0109910:CDS 45.0%
! TGGCTATTGGTCGATTCAAG+AGG - chr1_3:22026787-22026806 Msa0109910:intron 45.0%
GACCCCATTCAGTTCTTCAA+TGG + chr1_3:22027045-22027064 None:intergenic 45.0%
! TTGTCCTCAAAGGCATAAGG+AGG + chr1_3:22027077-22027096 None:intergenic 45.0%
ACCTTGGTTGTTGTCCTCAA+AGG + chr1_3:22027087-22027106 None:intergenic 45.0%
GTCGATCTTGCTGATACAAG+TGG - chr1_3:22027475-22027494 Msa0109910:CDS 45.0%
!! TTTAAAAAAAAATTAAAAAC+AGG + chr1_3:22027141-22027160 None:intergenic 5.0%
!! TTTAAAAAAAAATTAAAAAC+AGG + chr1_3:22027141-22027160 None:intergenic 5.0%
! GGAGGAGAGATTGACTCTCA+TGG - chr1_3:22026890-22026909 Msa0109910:CDS 50.0%
! GCCTTTGAGGACAACAACCA+AGG - chr1_3:22027083-22027102 Msa0109910:CDS 50.0%
! GGAGGAGAGATTGACTCTCA+TGG - chr1_3:22026890-22026909 Msa0109910:CDS 50.0%
! GCCTTTGAGGACAACAACCA+AGG - chr1_3:22027083-22027102 Msa0109910:CDS 50.0%
GGTCCGAAGAGGACATCAAG+AGG - chr1_3:22026422-22026441 Msa0109910:CDS 55.0%
GGTCCGAAGAGGACATCAAG+AGG - chr1_3:22026422-22026441 Msa0109910:CDS 55.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 22026419 22027543 22026419 ID=Msa0109910;Name=Msa0109910
chr1_3 mRNA 22026419 22027543 22026419 ID=Msa0109910-mRNA-1;Parent=Msa0109910;Name=Msa0109910-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.66|0.5|0.66|3|0|241
chr1_3 exon 22027051 22027543 22027051 ID=Msa0109910-mRNA-1:exon:7914;Parent=Msa0109910-mRNA-1
chr1_3 exon 22026822 22026929 22026822 ID=Msa0109910-mRNA-1:exon:7913;Parent=Msa0109910-mRNA-1
chr1_3 exon 22026419 22026543 22026419 ID=Msa0109910-mRNA-1:exon:7912;Parent=Msa0109910-mRNA-1
chr1_3 CDS 22027051 22027543 22027051 ID=Msa0109910-mRNA-1:cds;Parent=Msa0109910-mRNA-1
chr1_3 CDS 22026822 22026929 22026822 ID=Msa0109910-mRNA-1:cds;Parent=Msa0109910-mRNA-1
chr1_3 CDS 22026419 22026543 22026419 ID=Msa0109910-mRNA-1:cds;Parent=Msa0109910-mRNA-1
Gene Sequence

>Msa0109910

ATGGGTCCGAAGAGGACATCAAGAGGAAAACAGAAAATAAAAATCAAGAAGATCGAGAAAAAAAATGATCTTTTTGTTGCGTTTTCAACGAGAAAGTCTGGTATTTACAACAAGGCATCTGAGTTATCAACACTTTCTGGGGCTGCAGTTGATATTCTCATGTTTTCTCCAACTGGAAAACCATTTTGTTATGGAGAACCATCTTCTGAATCCATTACAAGAACTAGTTTGAAGGATGAAAATTCTTCAATAGAAGAGGGATTGAAGAATCTTAAGATTATTCAACAAAATGAAAAAAATGATGATACGTTGAATAAACTGCATGCTGCGGAAGCACAACGTAAAAGTTTGAAGATACTGAAAAGTTCTGGCTATTGGTCGATTCAAGAGGAAGATAATAAAAGCTACCAATATGATCAAGTAAAAGAAATTCACACATCTTTAGTTGGTGTCTTAAATAAATTGAAAAAAGGAGGAGAGATTGACTCTCATGCAATCTCTTCCATTGAAGAACTGAATGGGGTCAAAACAAATCCTCCTTATGCCTTTGAGGACAACAACCAAGGTCATGAAGTTGGTTCAAGTAAGAATTCTCATTCCTGTAAAGGTAAGGTTGCTATTGCTTCTAATGACATGGCTGAAAATAAAACAAAAGAAGTCGATCTTGCTGATACAAGTGGAATAGAGTATGAAAGTGGTGATGATCATGCTTCTTCAGATATATAA
Protein sequence

>Msa0109910

MGPKRTSRGKQKIKIKKIEKKNDLFVAFSTRKSGIYNKASELSTLSGAAVDILMFSPTGKPFCYGEPSSESITRTSLKDENSSIEEGLKNLKIIQQNEKNDDTLNKLHAAEAQRKSLKILKSSGYWSIQEEDNKSYQYDQVKEIHTSLVGVLNKLKKGGEIDSHAISSIEELNGVKTNPPYAFEDNNQGHEVGSSKNSHSCKGKVAIASNDMAENKTKEVDLADTSGIEYESGDDHASSDI*