AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0110050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0110050 MtrunA17_Chr1g0166821 100.000 458 0 0 1 458 1 458 0.0 939
Msa0110050 MtrunA17_Chr1g0187571 86.237 465 56 3 1 458 1 464 0.0 772
Msa0110050 MtrunA17_Chr7g0261501 77.223 461 95 6 2 452 1 461 0.0 699
Msa0110050 MtrunA17_Chr1g0183631 72.174 460 111 7 2 452 1 452 0.0 666
Msa0110050 MtrunA17_Chr1g0167261 74.731 372 66 4 1 368 1 348 0.0 553
Msa0110050 MtrunA17_Chr2g0329981 64.665 433 122 7 2 424 1 412 0.0 550
Msa0110050 MtrunA17_Chr4g0071031 75.811 339 76 3 2 340 1 333 0.0 548
Msa0110050 MtrunA17_Chr8g0342821 60.851 470 162 8 2 452 1 467 0.0 543
Msa0110050 MtrunA17_Chr8g0390211 61.772 429 145 8 2 420 1 420 0.0 524
Msa0110050 MtrunA17_Chr6g0486611 62.937 429 133 10 2 416 1 417 0.0 524
Msa0110050 MtrunA17_Chr2g0299661 57.816 467 178 8 2 452 1 464 4.85e-180 511
Msa0110050 MtrunA17_Chr1g0146151 54.801 427 177 4 2 420 1 419 4.17e-167 477
Msa0110050 MtrunA17_Chr3g0140071 54.853 443 161 6 2 418 1 430 7.05e-166 474
Msa0110050 MtrunA17_Chr7g0214531 39.649 285 153 6 6 274 31 312 2.24e-60 207
Msa0110050 MtrunA17_Chr3g0140431 38.710 279 158 6 6 274 32 307 2.69e-57 199
Msa0110050 MtrunA17_Chr1g0213321 38.028 284 162 6 6 278 113 393 5.79e-57 199
Msa0110050 MtrunA17_Chr1g0146301 37.276 279 162 6 6 274 118 393 9.15e-56 196
Msa0110050 MtrunA17_Chr7g0253211 37.234 282 161 5 10 278 324 602 1.58e-53 192
Msa0110050 MtrunA17_Chr8g0340491 37.234 282 155 6 10 274 128 404 4.75e-51 183
Msa0110050 MtrunA17_Chr3g0107051 31.050 219 129 8 6 215 17 222 1.48e-13 72.4
Msa0110050 MtrunA17_Chr4g0075541 27.305 282 175 10 12 282 89 351 2.60e-13 71.2
Msa0110050 MtrunA17_Chr5g0405421 25.000 224 151 6 9 224 98 312 1.78e-12 69.3
Msa0110050 MtrunA17_Chr7g0267751 27.189 217 134 8 10 216 135 337 1.04e-11 67.0
Msa0110050 MtrunA17_Chr7g0245031 33.871 124 69 4 108 229 250 362 2.17e-11 65.9
Msa0110050 MtrunA17_Chr7g0272841 24.537 216 144 4 9 214 67 273 4.50e-11 65.1
Msa0110050 MtrunA17_Chr4g0001331 30.667 225 126 12 5 216 15 222 4.93e-11 64.7
Msa0110050 MtrunA17_Chr4g0072831 30.719 153 74 6 8 154 8 134 5.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0110050 AT3G23340.1 77.293 458 87 4 2 458 1 442 0.0 720
Msa0110050 AT4G14340.1 75.431 464 93 5 2 458 7 456 0.0 716
Msa0110050 AT3G23340.2 74.672 458 85 5 2 458 1 428 0.0 686
Msa0110050 AT5G43320.1 72.500 480 109 8 2 458 1 480 0.0 682
Msa0110050 AT1G04440.1 71.581 468 122 3 2 458 1 468 0.0 674
Msa0110050 AT4G28540.1 71.639 476 107 9 2 452 5 477 0.0 663
Msa0110050 AT1G03930.1 73.517 472 101 9 2 452 1 469 0.0 649
Msa0110050 AT5G44100.1 71.158 475 112 6 2 452 1 474 0.0 629
Msa0110050 AT5G44100.2 71.158 475 112 6 2 452 1 474 0.0 629
Msa0110050 AT4G14340.2 86.196 326 44 1 2 326 7 332 0.0 600
Msa0110050 AT5G43320.2 82.883 333 46 2 2 326 1 330 0.0 573
Msa0110050 AT5G43320.3 82.883 333 46 2 2 326 1 330 0.0 573
Msa0110050 AT1G72710.1 69.895 382 105 5 2 377 1 378 0.0 545
Msa0110050 AT4G26100.1 65.385 416 112 8 2 412 1 389 0.0 539
Msa0110050 AT5G57015.1 77.143 315 69 1 2 316 1 312 0.0 531
Msa0110050 AT2G19470.1 73.795 332 80 3 2 327 1 331 0.0 524
Msa0110050 AT4G28860.1 62.010 408 123 8 2 391 1 394 2.94e-176 500
Msa0110050 AT4G28880.3 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0110050 AT4G28880.2 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0110050 AT4G28880.1 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0110050 AT4G28880.4 72.930 314 85 0 2 315 1 314 3.36e-176 500
Msa0110050 AT4G28860.2 72.188 320 84 2 2 321 1 315 7.54e-176 498
Msa0110050 AT4G08800.1 66.107 298 69 2 2 299 1 266 5.92e-146 418
Msa0110050 AT2G25760.2 40.357 280 152 4 10 274 107 386 6.19e-62 213
Msa0110050 AT2G25760.1 39.643 280 151 5 10 274 107 383 7.47e-59 205
Msa0110050 AT3G13670.1 35.640 289 167 6 6 278 131 416 3.61e-54 192
Msa0110050 AT3G03940.1 36.170 282 164 5 10 278 140 418 1.23e-53 191
Msa0110050 AT5G18190.2 36.170 282 164 5 10 278 130 408 2.03e-53 190
Msa0110050 AT5G18190.1 36.170 282 164 5 10 278 130 408 2.03e-53 190
Msa0110050 AT3G50530.1 25.751 233 138 7 6 220 144 359 1.24e-12 70.5
Msa0110050 AT3G06030.1 26.389 216 140 7 9 214 67 273 7.95e-12 67.8
Msa0110050 AT1G62400.1 26.761 284 174 11 12 282 88 350 1.02e-11 67.0
Msa0110050 AT1G30270.1 27.854 219 133 8 8 215 29 233 3.19e-11 65.9
Msa0110050 AT1G30270.2 27.854 219 133 8 8 215 29 233 4.31e-11 65.1

Find 169 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGTTAAATTCTGAATTT+TGG 0.096564 1_3:+22415031 Msa0110050:five_prime_UTR
TTCAAACTTGGGAGGAAAAT+TGG 0.201290 1_3:+22415105 Msa0110050:CDS
CATGAAGAGTCTTTATCTTT+AGG 0.208657 1_3:+22420365 Msa0110050:three_prime_UTR
CTGGAGTAGAACCAAGTAAA+AGG 0.212756 1_3:+22414894 Msa0110050:five_prime_UTR
AGTAGCAGACCAAGCTCTTC+TGG 0.221963 1_3:+22419944 Msa0110050:CDS
GTCATTTGGAGAAATTTATT+TGG 0.224733 1_3:+22415134 Msa0110050:CDS
CTACAAAATCTCTACAATTT+CGG 0.245113 1_3:+22414738 Msa0110050:five_prime_UTR
TTGAAGAAGCATATACAATT+TGG 0.250533 1_3:-22416646 None:intergenic
GAGAAATATCAATTAGCTTT+TGG 0.252061 1_3:-22420270 None:intergenic
TATCACCCTTCCATTGCATT+TGG 0.277778 1_3:+22420498 Msa0110050:three_prime_UTR
TTTGTAGGAAAGAAGGAAAA+TGG 0.298975 1_3:-22414722 None:intergenic
GTTATGATGGATCTTGTTAT+TGG 0.304007 1_3:+22415075 Msa0110050:exon
GTCATGGCCATTGACCTTCT+TGG 0.314864 1_3:+22417058 Msa0110050:CDS
AATCGAAGTAAGAACAAATC+TGG 0.316441 1_3:-22414933 None:intergenic
ATCACCCTTCCATTGCATTT+GGG 0.329797 1_3:+22420499 Msa0110050:three_prime_UTR
CAGAGAGAAGGGTAAGGATT+TGG 0.335145 1_3:-22414796 None:intergenic
TCATTTGGAGAAATTTATTT+GGG 0.336755 1_3:+22415135 Msa0110050:CDS
AAGCATTGAAGTACCTCTAT+TGG 0.339689 1_3:-22418607 None:intergenic
GAAATTCGAGATAGATTATC+AGG 0.341801 1_3:+22419635 Msa0110050:CDS
AAAATTGGAAGTGGGTCATT+TGG 0.351862 1_3:+22415120 Msa0110050:CDS
TGTAGCAACCTGATTCTGAT+AGG 0.353677 1_3:+22419870 Msa0110050:intron
TCTCTTAAGATATGAATAAT+CGG 0.357282 1_3:-22419002 None:intergenic
ATATTGAAGTATCCACAAAT+TGG 0.362130 1_3:+22419175 Msa0110050:CDS
AGTTTGACTATGTATTTGAT+TGG 0.365329 1_3:+22419149 Msa0110050:CDS
ATATCTTAAGAGACTCTTCC+GGG 0.366043 1_3:+22419012 Msa0110050:CDS
AGAAACACTAACCACATCTT+TGG 0.368375 1_3:-22419735 None:intergenic
GTCTTAAACCCAGGACCATC+TGG 0.374408 1_3:+22419318 Msa0110050:CDS
GAGCGATTAGAACGGCCTTC+AGG 0.389926 1_3:+22419342 Msa0110050:CDS
CATATCTTAAGAGACTCTTC+CGG 0.390501 1_3:+22419011 Msa0110050:CDS
CTTCCATGATTATCTAAGCT+TGG 0.392129 1_3:+22420335 Msa0110050:three_prime_UTR
CCTGTGTTGTGGTCCATTCA+TGG 0.394126 1_3:+22420247 Msa0110050:three_prime_UTR
ACCGCAATGATCGGCAATAG+TGG 0.400015 1_3:-22418967 None:intergenic
GGGTGGCTCCTAATTTAGAT+TGG 0.401275 1_3:+22420536 Msa0110050:three_prime_UTR
GGTGGCTCCTAATTTAGATT+GGG 0.404634 1_3:+22420537 Msa0110050:three_prime_UTR
TTTAGGCCGCAAGGCAAATC+AGG 0.406238 1_3:+22417330 Msa0110050:CDS
TAGGAGCCACCCACTATTAG+AGG 0.407235 1_3:-22420525 None:intergenic
AATCGCTCTCCAGATGGTCC+TGG 0.408461 1_3:-22419327 None:intergenic
TAGAAGACAAATGGAACATA+TGG 0.417936 1_3:-22420757 None:intergenic
CTTTCATTCCTTGCCATGGA+AGG 0.419286 1_3:-22418531 None:intergenic
TCAATTGAGTAGAAGACAAA+TGG 0.419686 1_3:-22420766 None:intergenic
GTAATGGCAGTGCTTCAAAA+AGG 0.426296 1_3:+22419909 Msa0110050:CDS
AGCTTTGAGCTCCTGTCAAT+TGG 0.426702 1_3:+22420112 Msa0110050:CDS
TTTAAGACTGGTTTCACACT+TGG 0.427367 1_3:-22419303 None:intergenic
ATTTGGGACCCCTCTAATAG+TGG 0.431719 1_3:+22420515 Msa0110050:three_prime_UTR
AGAATGTTTGGAGCCTCCTT+AGG 0.434861 1_3:+22420593 Msa0110050:three_prime_UTR
TATCAGTGAACAAGAATGTT+TGG 0.436233 1_3:+22420581 Msa0110050:three_prime_UTR
GATAACCTTCTCGAATGAAT+AGG 0.436809 1_3:-22419036 None:intergenic
GGTACGGGTGAAGGATGATT+TGG 0.444496 1_3:-22420053 None:intergenic
GTAGCAGACCAAGCTCTTCT+GGG 0.445063 1_3:+22419945 Msa0110050:CDS
ACCTCGTGTCCCTGCGGTAC+GGG 0.452524 1_3:-22420068 None:intergenic
CTGCGAGCCCTATCAGAATC+AGG 0.454495 1_3:-22419878 None:intergenic
ACTAACCCGTGTTCTAGAAC+TGG 0.454676 1_3:-22419200 None:intergenic
TTAAATAAGTCTTCGAGACT+TGG 0.457011 1_3:-22417082 None:intergenic
GATGGTCCTGGGTTTAAGAC+TGG 0.457367 1_3:-22419315 None:intergenic
ATTGGTGGAAAATTCAAACT+TGG 0.459721 1_3:+22415093 Msa0110050:CDS
CTAGAACTGGATCCAATTTG+TGG 0.461995 1_3:-22419187 None:intergenic
TGAGGATGCTTTGTCTTCAC+AGG 0.464666 1_3:-22416609 None:intergenic
TGGAGTAGAACCAAGTAAAA+GGG 0.468247 1_3:+22414895 Msa0110050:five_prime_UTR
TTCTGTATTAATGTTTAACT+AGG 0.471777 1_3:+22420705 Msa0110050:three_prime_UTR
ATACCTCATATAAAGTGGTC+TGG 0.472466 1_3:+22417016 Msa0110050:CDS
GAGCTCCTGTCAATTGGTAC+CGG 0.473754 1_3:+22420118 Msa0110050:CDS
GAACCAAGCTTAGATAATCA+TGG 0.474739 1_3:-22420338 None:intergenic
ATATATTGAGTAAAATGAAC+AGG 0.475550 1_3:-22420218 None:intergenic
TTTCATATTAGGTACCTGTA+TGG 0.476195 1_3:-22417768 None:intergenic
CTCTTAAGATATGAATAATC+GGG 0.477779 1_3:-22419001 None:intergenic
AAATTGTATATGCTTCTTCA+AGG 0.478491 1_3:+22416648 Msa0110050:CDS
AGCATCTGAAGAAGCATTTG+AGG 0.479553 1_3:-22420312 None:intergenic
TGTCCCTGCGGTACGGGTGA+AGG 0.481064 1_3:-22420062 None:intergenic
CACCTCGTGTCCCTGCGGTA+CGG 0.484291 1_3:-22420069 None:intergenic
CCAGCTTTCATTCCTTGCCA+TGG 0.488363 1_3:-22418535 None:intergenic
GAAAATGCTTACTCCAATAG+AGG 0.494552 1_3:+22418594 Msa0110050:CDS
TACTTCGATTCAACTAGTGA+TGG 0.500913 1_3:+22414946 Msa0110050:five_prime_UTR
CGACTAGACCGGCTTTCACT+AGG 0.501636 1_3:-22419971 None:intergenic
AGAGGAAGTGGCTGTTAAGC+TGG 0.503078 1_3:+22415266 Msa0110050:CDS
CTAGGTTCCCCAGAAGAGCT+TGG 0.503285 1_3:-22419953 None:intergenic
GCGATATTGACGCAGAGAGA+AGG 0.503708 1_3:-22414808 None:intergenic
TCATCCTTCACCCGTACCGC+AGG 0.504700 1_3:+22420058 Msa0110050:CDS
AGTAGAGTATATGCACTCTC+GGG 0.504876 1_3:+22417264 Msa0110050:CDS
GGTCTGCTACTTGATATCAT+AGG 0.504963 1_3:-22419932 None:intergenic
AGAAGGAAAATGGATGAGAA+TGG 0.508280 1_3:-22414712 None:intergenic
AGATAAAGACTCTTCATGAA+TGG 0.508742 1_3:-22420360 None:intergenic
TATAAAGTGGTCTGGAGTTG+AGG 0.509261 1_3:+22417024 Msa0110050:CDS
ATCGCTCTCCAGATGGTCCT+GGG 0.510903 1_3:-22419326 None:intergenic
TAAACCCATCAGAAAATTGT+CGG 0.511510 1_3:-22417311 None:intergenic
ACTCCAGACCACTTTATATG+AGG 0.512923 1_3:-22417019 None:intergenic
AAATATGATGTGAATTCTGT+TGG 0.516022 1_3:-22418944 None:intergenic
TATATTTCTATCCTGTGTTG+TGG 0.518820 1_3:+22420236 Msa0110050:three_prime_UTR
GAGTAGAGTATATGCACTCT+CGG 0.522104 1_3:+22417263 Msa0110050:CDS
CACATAAGCATATACCATAC+AGG 0.528806 1_3:+22417754 Msa0110050:CDS
TTGGTGGAAAATTCAAACTT+GGG 0.528933 1_3:+22415094 Msa0110050:CDS
GTAGCAACCTGATTCTGATA+GGG 0.529158 1_3:+22419871 Msa0110050:intron
TGGATCCAGTTCTAGAACAC+GGG 0.531689 1_3:+22419195 Msa0110050:CDS
GATGATTTGGATTCAAGACC+AGG 0.533754 1_3:-22420040 None:intergenic
CGATATTGACGCAGAGAGAA+GGG 0.535898 1_3:-22414807 None:intergenic
ATAAAGTGGTCTGGAGTTGA+GGG 0.536659 1_3:+22417025 Msa0110050:CDS
CTGCGCAAGGACTGCAGCAT+AGG 0.536788 1_3:+22419690 Msa0110050:CDS
TGGAGTGTGTGTTTAACAAA+CGG 0.538160 1_3:-22420737 None:intergenic
CTGGAATACCTCATATAAAG+TGG 0.539142 1_3:+22417011 Msa0110050:CDS
CAGGTATACATTATTGACTA+CGG 0.539979 1_3:+22417702 Msa0110050:intron
AGGGAAAACAAGAATCTCAC+TGG 0.540312 1_3:+22418204 Msa0110050:intron
TGTGCAAACTCAAGAGGAAG+TGG 0.545993 1_3:+22415254 Msa0110050:CDS
TATCTTCAAACCGCAATGAT+CGG 0.546276 1_3:-22418976 None:intergenic
AAACCCATCAGAAAATTGTC+GGG 0.547167 1_3:-22417310 None:intergenic
GATAGATTATCAGGTGCAGT+GGG 0.549752 1_3:+22419644 Msa0110050:CDS
ATGATGGATCTTGTTATTGG+TGG 0.549805 1_3:+22415078 Msa0110050:CDS
ACTTCGATTCAACTAGTGAT+GGG 0.554162 1_3:+22414947 Msa0110050:five_prime_UTR
ACTTGGTCCAAGAAGGTCAA+TGG 0.555497 1_3:-22417065 None:intergenic
GCATCTGAAGAAGCATTTGA+GGG 0.557442 1_3:-22420311 None:intergenic
CGGGACCTATTCATTCGAGA+AGG 0.558168 1_3:+22419031 Msa0110050:CDS
GCTCGCAGTTCTACTCGTAA+TGG 0.559763 1_3:+22419893 Msa0110050:CDS
TTGGACTCGTAGAGAAGTTG+AGG 0.560210 1_3:-22416627 None:intergenic
AGCTCCTGTCAATTGGTACC+GGG 0.562482 1_3:+22420119 Msa0110050:CDS
CTTCGAGACTTGGTCCAAGA+AGG 0.563259 1_3:-22417072 None:intergenic
CTTGGGAGGAAAATTGGAAG+TGG 0.565797 1_3:+22415111 Msa0110050:CDS
CCATGGCAAGGAATGAAAGC+TGG 0.566338 1_3:+22418535 Msa0110050:CDS
TTTGGGACCCCTCTAATAGT+GGG 0.567908 1_3:+22420516 Msa0110050:three_prime_UTR
CGTTCTAATCGCTCTCCAGA+TGG 0.568142 1_3:-22419333 None:intergenic
ATCGAAGTAAGAACAAATCT+GGG 0.569725 1_3:-22414932 None:intergenic
GTTAACACTCACCTTGGAGT+TGG 0.571211 1_3:+22418246 Msa0110050:CDS
GGGGTCCCAAATGCAATGGA+AGG 0.572247 1_3:-22420504 None:intergenic
AGAAGGAATGGGTCTGCGCA+AGG 0.575048 1_3:+22419677 Msa0110050:CDS
TAGATTATCAGGTGCAGTGG+GGG 0.578783 1_3:+22419646 Msa0110050:CDS
GGATCTGTGCGTGGAGGTGA+AGG 0.579945 1_3:-22414775 None:intergenic
CTGGGGAACCTAGTGAAAGC+CGG 0.580386 1_3:+22419963 Msa0110050:CDS
TAGATACCTGATTTGCCTTG+CGG 0.583445 1_3:-22417336 None:intergenic
TCGAGATCAATCGACTAGAC+CGG 0.585197 1_3:-22419982 None:intergenic
AGTAAAATGAACAGGTGTGA+AGG 0.585370 1_3:-22420210 None:intergenic
GCAAGTGTTAACACTCACCT+TGG 0.587854 1_3:+22418240 Msa0110050:CDS
GTGAAACCAGTCTTAAACCC+AGG 0.592219 1_3:+22419309 Msa0110050:CDS
TGTTAATGTGCAAACTCAAG+AGG 0.593524 1_3:+22415248 Msa0110050:CDS
TAGAGGGGTCCCAAATGCAA+TGG 0.594829 1_3:-22420508 None:intergenic
TTGACGCAGAGAGAAGGGTA+AGG 0.595302 1_3:-22414802 None:intergenic
AGGAGCCACCCACTATTAGA+GGG 0.595602 1_3:-22420524 None:intergenic
TGCCTCACTCACCAACTCCA+AGG 0.596982 1_3:-22418257 None:intergenic
AGATAGATTATCAGGTGCAG+TGG 0.597787 1_3:+22419643 Msa0110050:CDS
GTGGAAAATTCAAACTTGGG+AGG 0.601354 1_3:+22415097 Msa0110050:CDS
CTTCTCGAATGAATAGGTCC+CGG 0.601529 1_3:-22419030 None:intergenic
CCATGAATGGACCACAACAC+AGG 0.608663 1_3:-22420247 None:intergenic
GTGGCTCCTAATTTAGATTG+GGG 0.609750 1_3:+22420538 Msa0110050:three_prime_UTR
TCCACTATTGCCGATCATTG+CGG 0.612017 1_3:+22418966 Msa0110050:CDS
AATGGAAGTGTGAATGATTG+TGG 0.614836 1_3:-22414694 None:intergenic
GGGACCCCTCTAATAGTGGG+TGG 0.614908 1_3:+22420519 Msa0110050:three_prime_UTR
AAATGAACAGGTGTGAAGGG+TGG 0.615017 1_3:-22420206 None:intergenic
ACCCGTACCGCAGGGACACG+AGG 0.619215 1_3:+22420067 Msa0110050:CDS
TGAGGGCGAGTACAATGTCA+TGG 0.623455 1_3:+22417042 Msa0110050:CDS
TCTGATGGGTTTAGGCCGCA+AGG 0.624373 1_3:+22417321 Msa0110050:CDS
GGGTCCCAAATGCAATGGAA+GGG 0.636237 1_3:-22420503 None:intergenic
CTAACCACATCTTTGGAAGA+CGG 0.637061 1_3:-22419728 None:intergenic
AGAGATGATCTAGAATCACT+TGG 0.637396 1_3:+22418398 Msa0110050:CDS
ACTACTCAGAGGGTTCAACC+TGG 0.637692 1_3:+22420022 Msa0110050:CDS
TTGGATCCAGTTCTAGAACA+CGG 0.640938 1_3:+22419194 Msa0110050:CDS
TTGGGAGGAAAATTGGAAGT+GGG 0.646604 1_3:+22415112 Msa0110050:CDS
TAGCAGACCAAGCTCTTCTG+GGG 0.648246 1_3:+22419946 Msa0110050:CDS
CATCCTTCACCCGTACCGCA+GGG 0.651920 1_3:+22420059 Msa0110050:CDS
TTGTATATGCTTCTTCAAGG+AGG 0.656173 1_3:+22416651 Msa0110050:CDS
TAAGGATTTGGATCTGTGCG+TGG 0.657997 1_3:-22414784 None:intergenic
GTAAAATGAACAGGTGTGAA+GGG 0.660908 1_3:-22420209 None:intergenic
GTCGTCTATCGACTACTCAG+AGG 0.661119 1_3:+22420011 Msa0110050:CDS
TCGTCTATCGACTACTCAGA+GGG 0.669134 1_3:+22420012 Msa0110050:CDS
TATGCCGTCTTCCAAAGATG+TGG 0.681158 1_3:+22419724 Msa0110050:CDS
GGAAGTGTGAATGATTGTGG+TGG 0.685924 1_3:-22414691 None:intergenic
GTAGAGTATATGCACTCTCG+GGG 0.691454 1_3:+22417265 Msa0110050:CDS
AAATAAGCGAAAACTGTCGA+CGG 0.692156 1_3:+22420148 Msa0110050:exon
CATCTGGAGAGCGATTAGAA+CGG 0.692759 1_3:+22419334 Msa0110050:CDS
GGATTTGGATCTGTGCGTGG+AGG 0.715402 1_3:-22414781 None:intergenic
GGAGCCACCCACTATTAGAG+GGG 0.722209 1_3:-22420523 None:intergenic
GCGACCACCTCGTGTCCCTG+CGG 0.725612 1_3:-22420074 None:intergenic
ATAGATTATCAGGTGCAGTG+GGG 0.730659 1_3:+22419645 Msa0110050:CDS
CGTACCGCAGGGACACGAGG+TGG 0.738349 1_3:+22420070 Msa0110050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGTTATATTTGAATAATT+TGG + chr1_3:22415209-22415228 Msa0110050:intron 10.0%
!!! GAAGTTTATTTTTAAAAAAA+AGG - chr1_3:22415754-22415773 None:intergenic 10.0%
!! TATTTAAATTAGAACTTTAA+TGG - chr1_3:22418327-22418346 None:intergenic 10.0%
!!! AAGTTCTAATTTAAATAAAT+TGG + chr1_3:22418330-22418349 Msa0110050:intron 10.0%
!!! AGTTCTAATTTAAATAAATT+GGG + chr1_3:22418331-22418350 Msa0110050:intron 10.0%
!!! TTTTGTATAAATTCATTTTC+TGG + chr1_3:22414875-22414894 Msa0110050:five_prime_UTR 15.0%
!!! AATCCAATTTTTATAAAAAC+AGG - chr1_3:22414999-22415018 None:intergenic 15.0%
!! TGTAATAATTACAAGAAAAT+CGG - chr1_3:22417684-22417703 None:intergenic 15.0%
!! TAAAAAACATGTAAACTTAA+AGG - chr1_3:22417868-22417887 None:intergenic 15.0%
!!! CATCCTGTTTTTATAAAAAT+TGG + chr1_3:22414993-22415012 Msa0110050:five_prime_UTR 20.0%
!! TCATTTGGAGAAATTTATTT+GGG + chr1_3:22415135-22415154 Msa0110050:CDS 20.0%
!! AAAACTATAAAACACAATTC+AGG - chr1_3:22415437-22415456 None:intergenic 20.0%
!!! TTAGTTGTTATTTTTGTTAG+TGG + chr1_3:22415513-22415532 Msa0110050:intron 20.0%
!!! TAGTTGTTATTTTTGTTAGT+GGG + chr1_3:22415514-22415533 Msa0110050:intron 20.0%
!!! ATTTTCAATATTCTGATCAT+TGG + chr1_3:22415891-22415910 Msa0110050:intron 20.0%
!! TGTACTTATGTACTTATTTA+TGG + chr1_3:22415925-22415944 Msa0110050:intron 20.0%
!! AAGATTTGTATACTTCTATT+AGG + chr1_3:22416087-22416106 Msa0110050:intron 20.0%
!! ATTCATATATAAATTCTGTG+TGG - chr1_3:22416132-22416151 None:intergenic 20.0%
!! TTATTGAATAAATAGGGAAA+TGG - chr1_3:22416355-22416374 None:intergenic 20.0%
!! AAGCAGTTATTGAATAAATA+GGG - chr1_3:22416361-22416380 None:intergenic 20.0%
!! TAAGCAGTTATTGAATAAAT+AGG - chr1_3:22416362-22416381 None:intergenic 20.0%
!!! ACTTTAAAATATGCAAGTTT+TGG + chr1_3:22416475-22416494 Msa0110050:intron 20.0%
!! AAATTGAACCGATATAAATT+AGG - chr1_3:22416699-22416718 None:intergenic 20.0%
!! TTAGCATGATGTTAAAAATA+TGG - chr1_3:22417190-22417209 None:intergenic 20.0%
!!! TTCTGCATTTATTGTTATTT+AGG + chr1_3:22417370-22417389 Msa0110050:intron 20.0%
!!! TTTTACCAAAAAACAAGAAA+TGG + chr1_3:22417549-22417568 Msa0110050:intron 20.0%
!!! GATTTTCTTGTAATTATTAC+AGG + chr1_3:22417683-22417702 Msa0110050:intron 20.0%
!! CAAAATTAAGAAATCCAAAA+GGG - chr1_3:22417918-22417937 None:intergenic 20.0%
!! TCAAAATTAAGAAATCCAAA+AGG - chr1_3:22417919-22417938 None:intergenic 20.0%
!! AATGTAAAGAGATGAAAAAT+TGG - chr1_3:22417985-22418004 None:intergenic 20.0%
!! ATAATAATACTTGTGAAATG+CGG - chr1_3:22418713-22418732 None:intergenic 20.0%
!! AAATTGTGAAAGATGAAAAT+TGG - chr1_3:22418873-22418892 None:intergenic 20.0%
!! TCTCTTAAGATATGAATAAT+CGG - chr1_3:22419005-22419024 None:intergenic 20.0%
!! AACCACTTGTTTAAATAATA+TGG + chr1_3:22419504-22419523 Msa0110050:intron 20.0%
!! ATCCATATTATTTAAACAAG+TGG - chr1_3:22419509-22419528 None:intergenic 20.0%
!!! TTGTCTTTTGTTTTGTTTTT+TGG + chr1_3:22419783-22419802 Msa0110050:intron 20.0%
!! ATATATTGAGTAAAATGAAC+AGG - chr1_3:22420221-22420240 None:intergenic 20.0%
!! TTCTGTATTAATGTTTAACT+AGG + chr1_3:22420705-22420724 Msa0110050:three_prime_UTR 20.0%
! CTACAAAATCTCTACAATTT+CGG + chr1_3:22414738-22414757 Msa0110050:five_prime_UTR 25.0%
!!! TGGATTTTTACTTTTTACAG+TGG + chr1_3:22415013-22415032 Msa0110050:five_prime_UTR 25.0%
!! AGTGGTTAAATTCTGAATTT+TGG + chr1_3:22415031-22415050 Msa0110050:five_prime_UTR 25.0%
!! GTGGTTAAATTCTGAATTTT+GGG + chr1_3:22415032-22415051 Msa0110050:five_prime_UTR 25.0%
!! TGGTTAAATTCTGAATTTTG+GGG + chr1_3:22415033-22415052 Msa0110050:five_prime_UTR 25.0%
!!! TTTTGGGGTGTTTTTTTTAT+TGG + chr1_3:22415048-22415067 Msa0110050:five_prime_UTR 25.0%
!!! TTTGGGGTGTTTTTTTTATT+GGG + chr1_3:22415049-22415068 Msa0110050:five_prime_UTR 25.0%
!!! TTTTATTGGGTTTGTTATGA+TGG + chr1_3:22415062-22415081 Msa0110050:exon 25.0%
! GTCATTTGGAGAAATTTATT+TGG + chr1_3:22415134-22415153 Msa0110050:CDS 25.0%
!! AATTTGGATTTGTTTGTTTC+AGG + chr1_3:22415225-22415244 Msa0110050:intron 25.0%
!!! AGTTGTTATTTTTGTTAGTG+GGG + chr1_3:22415515-22415534 Msa0110050:intron 25.0%
! ATCTTGACAGAAATAGAATA+AGG + chr1_3:22416235-22416254 Msa0110050:intron 25.0%
!! TTGAAGAAGCATATACAATT+TGG - chr1_3:22416649-22416668 None:intergenic 25.0%
! AAATTGTATATGCTTCTTCA+AGG + chr1_3:22416648-22416667 Msa0110050:CDS 25.0%
! TTTGCCTTCCTAATTTATAT+CGG + chr1_3:22416688-22416707 Msa0110050:intron 25.0%
!!! TATATCGGTTCAATTTCTTT+TGG + chr1_3:22416703-22416722 Msa0110050:intron 25.0%
!! AAACAAATCACTATTTTCTG+CGG + chr1_3:22416882-22416901 Msa0110050:intron 25.0%
!!! CGTTAATTTGTATTTTAAGC+TGG + chr1_3:22416992-22417011 Msa0110050:intron 25.0%
! TTTATTCCTGTAATTGACAT+CGG - chr1_3:22417504-22417523 None:intergenic 25.0%
!!! TACTTCCATTTCTTGTTTTT+TGG - chr1_3:22417557-22417576 None:intergenic 25.0%
! ATGGAAGTAGAAAATAGAAA+TGG + chr1_3:22417568-22417587 Msa0110050:intron 25.0%
! AAATAGAAATGGAACCAAAT+AGG + chr1_3:22417579-22417598 Msa0110050:intron 25.0%
! AAAAGAAATAAAGGCCTATT+TGG - chr1_3:22417596-22417615 None:intergenic 25.0%
!!! AAATAGGCCTTTATTTCTTT+TGG + chr1_3:22417595-22417614 Msa0110050:intron 25.0%
!!! CACAATAAATTTTAGTGAAC+GGG - chr1_3:22417635-22417654 None:intergenic 25.0%
!!! GCACAATAAATTTTAGTGAA+CGG - chr1_3:22417636-22417655 None:intergenic 25.0%
! TACCTAATATGAAATTTGGT+TGG + chr1_3:22417777-22417796 Msa0110050:intron 25.0%
! ACCTAATATGAAATTTGGTT+GGG + chr1_3:22417778-22417797 Msa0110050:intron 25.0%
! CAAAAGGGAAAAAAATACAA+AGG - chr1_3:22417903-22417922 None:intergenic 25.0%
!!! CTTTGTATTTTTTTCCCTTT+TGG + chr1_3:22417901-22417920 Msa0110050:intron 25.0%
! AATTGGATATGAAATATCAC+AGG - chr1_3:22417968-22417987 None:intergenic 25.0%
!!! TATATCGACTTTTTCTAACT+TGG + chr1_3:22418066-22418085 Msa0110050:intron 25.0%
!!! TGCACTATTTTTCTTTCAAT+AGG + chr1_3:22418184-22418203 Msa0110050:intron 25.0%
!!! GCACTATTTTTCTTTCAATA+GGG + chr1_3:22418185-22418204 Msa0110050:intron 25.0%
! TTTGCAAAGAATTTACAGTT+TGG + chr1_3:22418890-22418909 Msa0110050:intron 25.0%
! AAATATGATGTGAATTCTGT+TGG - chr1_3:22418947-22418966 None:intergenic 25.0%
! CTCTTAAGATATGAATAATC+GGG - chr1_3:22419004-22419023 None:intergenic 25.0%
!!! AAAATGCACAATTTCTAGTA+AGG - chr1_3:22419120-22419139 None:intergenic 25.0%
!! ACTAGAAATTGTGCATTTTT+AGG + chr1_3:22419121-22419140 Msa0110050:intron 25.0%
! AGTTTGACTATGTATTTGAT+TGG + chr1_3:22419149-22419168 Msa0110050:CDS 25.0%
!! ATATTGAAGTATCCACAAAT+TGG + chr1_3:22419175-22419194 Msa0110050:CDS 25.0%
! AGATGAAGATGAAAACTAAT+AGG - chr1_3:22419229-22419248 None:intergenic 25.0%
!!! TCATCTTCATCTTTAAGTTT+TGG + chr1_3:22419237-22419256 Msa0110050:intron 25.0%
!!! CTAATCCCTTTTATTTTAGT+CGG + chr1_3:22419608-22419627 Msa0110050:intron 25.0%
!! CACATGATTTTCTTTTTGTA+TGG + chr1_3:22419759-22419778 Msa0110050:intron 25.0%
! GGATGTCTCAAAAAAAAAAA+AGG - chr1_3:22420188-22420207 None:intergenic 25.0%
!!! GAGAAATATCAATTAGCTTT+TGG - chr1_3:22420273-22420292 None:intergenic 25.0%
!!! ATTCTCTACAATTTTTCAGT+TGG + chr1_3:22420431-22420450 Msa0110050:three_prime_UTR 25.0%
!!! AATTTTTCAGTTGGACAAAA+GGG + chr1_3:22420440-22420459 Msa0110050:three_prime_UTR 25.0%
TTTGTAGGAAAGAAGGAAAA+TGG - chr1_3:22414725-22414744 None:intergenic 30.0%
! TAGAGATTTTGTAGGAAAGA+AGG - chr1_3:22414732-22414751 None:intergenic 30.0%
! CGAAATTGTAGAGATTTTGT+AGG - chr1_3:22414740-22414759 None:intergenic 30.0%
! GAAAAGAAAACCCTTTTACT+TGG - chr1_3:22414908-22414927 None:intergenic 30.0%
ATCGAAGTAAGAACAAATCT+GGG - chr1_3:22414935-22414954 None:intergenic 30.0%
AATCGAAGTAAGAACAAATC+TGG - chr1_3:22414936-22414955 None:intergenic 30.0%
!! GTTATGATGGATCTTGTTAT+TGG + chr1_3:22415075-22415094 Msa0110050:exon 30.0%
ATTGGTGGAAAATTCAAACT+TGG + chr1_3:22415093-22415112 Msa0110050:CDS 30.0%
TTGGTGGAAAATTCAAACTT+GGG + chr1_3:22415094-22415113 Msa0110050:CDS 30.0%
CTAGGTAGTTGACATTTAAA+TGG + chr1_3:22415484-22415503 Msa0110050:intron 30.0%
AAATAGTGATCGGAGTAATA+AGG - chr1_3:22415562-22415581 None:intergenic 30.0%
CATCATCGTTAAATAGTGAT+CGG - chr1_3:22415572-22415591 None:intergenic 30.0%
AAAATGCAGGTAATGTGTAT+GGG - chr1_3:22415876-22415895 None:intergenic 30.0%
GATCAGAATATTGAAAATGC+AGG - chr1_3:22415889-22415908 None:intergenic 30.0%
TAACATTTACAGAACTGAAG+GGG - chr1_3:22416010-22416029 None:intergenic 30.0%
GTAACATTTACAGAACTGAA+GGG - chr1_3:22416011-22416030 None:intergenic 30.0%
AGTAACATTTACAGAACTGA+AGG - chr1_3:22416012-22416031 None:intergenic 30.0%
TAAGATATGAACTAAGTCGT+TGG + chr1_3:22416032-22416051 Msa0110050:intron 30.0%
GTATACAAATCTTGAAGCAA+GGG - chr1_3:22416080-22416099 None:intergenic 30.0%
AGTATACAAATCTTGAAGCA+AGG - chr1_3:22416081-22416100 None:intergenic 30.0%
AAGAATGATTCTCAAAACAG+AGG + chr1_3:22416182-22416201 Msa0110050:intron 30.0%
GCTTTATGATGGTTATTTGT+TGG + chr1_3:22416504-22416523 Msa0110050:intron 30.0%
! ACTTTTCTCTACGTTTTCAT+TGG + chr1_3:22416575-22416594 Msa0110050:intron 30.0%
TGAACCGATATAAATTAGGA+AGG - chr1_3:22416695-22416714 None:intergenic 30.0%
TTAAATAAGTCTTCGAGACT+TGG - chr1_3:22417085-22417104 None:intergenic 30.0%
AAAGTGGTAATTCACATTGA+AGG - chr1_3:22417230-22417249 None:intergenic 30.0%
ATACTCTACTCTGTTTATCT+AGG - chr1_3:22417254-22417273 None:intergenic 30.0%
TAAACCCATCAGAAAATTGT+CGG - chr1_3:22417314-22417333 None:intergenic 30.0%
TATGTCATGCTTAAATTCTC+TGG - chr1_3:22417406-22417425 None:intergenic 30.0%
! TTTTAGTGAACGGGATTATA+TGG - chr1_3:22417626-22417645 None:intergenic 30.0%
AAAATCGGAAAACTTGACAT+AGG - chr1_3:22417669-22417688 None:intergenic 30.0%
! CAGGTATACATTATTGACTA+CGG + chr1_3:22417702-22417721 Msa0110050:intron 30.0%
TTTCATATTAGGTACCTGTA+TGG - chr1_3:22417771-22417790 None:intergenic 30.0%
CAGGTACCTAATATGAAATT+TGG + chr1_3:22417773-22417792 Msa0110050:intron 30.0%
TCCCAACCAAATTTCATATT+AGG - chr1_3:22417782-22417801 None:intergenic 30.0%
CAATATACTCAAGGAATCAA+AGG - chr1_3:22417820-22417839 None:intergenic 30.0%
ATCTGTTATTGCACATTCAT+TGG - chr1_3:22418047-22418066 None:intergenic 30.0%
CATCATTGTACTTTCTAACT+TGG + chr1_3:22418488-22418507 Msa0110050:intron 30.0%
TTTGGATAATTGGTTATGTC+AGG + chr1_3:22418659-22418678 Msa0110050:intron 30.0%
TAGATTTCAGAACTTGCAAT+AGG - chr1_3:22419374-22419393 None:intergenic 30.0%
GTTTATATGATACACTGCAA+AGG + chr1_3:22419529-22419548 Msa0110050:intron 30.0%
AATGAAAAGACTCTGATCAT+TGG + chr1_3:22419578-22419597 Msa0110050:intron 30.0%
CGACTAAAATAAAAGGGATT+AGG - chr1_3:22419610-22419629 None:intergenic 30.0%
CTTGTCCGACTAAAATAAAA+GGG - chr1_3:22419616-22419635 None:intergenic 30.0%
TCTTGTCCGACTAAAATAAA+AGG - chr1_3:22419617-22419636 None:intergenic 30.0%
GAAATTCGAGATAGATTATC+AGG + chr1_3:22419635-22419654 Msa0110050:CDS 30.0%
!! TTTCGCTTATTTTCTTTTCC+CGG - chr1_3:22420140-22420159 None:intergenic 30.0%
! TATATTTCTATCCTGTGTTG+TGG + chr1_3:22420236-22420255 Msa0110050:three_prime_UTR 30.0%
AGATAAAGACTCTTCATGAA+TGG - chr1_3:22420363-22420382 None:intergenic 30.0%
CATGAAGAGTCTTTATCTTT+AGG + chr1_3:22420365-22420384 Msa0110050:three_prime_UTR 30.0%
!! CAATTTTTCAGTTGGACAAA+AGG + chr1_3:22420439-22420458 Msa0110050:three_prime_UTR 30.0%
! GTTTTACCCCAATCTAAATT+AGG - chr1_3:22420547-22420566 None:intergenic 30.0%
TATCAGTGAACAAGAATGTT+TGG + chr1_3:22420581-22420600 Msa0110050:three_prime_UTR 30.0%
AAAAACTTCAAAACCTAAGG+AGG - chr1_3:22420609-22420628 None:intergenic 30.0%
AGCAAAAACTTCAAAACCTA+AGG - chr1_3:22420612-22420631 None:intergenic 30.0%
!!! TTAGGTTTTGAAGTTTTTGC+TGG + chr1_3:22420611-22420630 Msa0110050:three_prime_UTR 30.0%
TAGAAGACAAATGGAACATA+TGG - chr1_3:22420760-22420779 None:intergenic 30.0%
! AATGGAAGTGTGAATGATTG+TGG - chr1_3:22414697-22414716 None:intergenic 35.0%
AGAAGGAAAATGGATGAGAA+TGG - chr1_3:22414715-22414734 None:intergenic 35.0%
TGGAGTAGAACCAAGTAAAA+GGG + chr1_3:22414895-22414914 Msa0110050:five_prime_UTR 35.0%
TACTTCGATTCAACTAGTGA+TGG + chr1_3:22414946-22414965 Msa0110050:five_prime_UTR 35.0%
ACTTCGATTCAACTAGTGAT+GGG + chr1_3:22414947-22414966 Msa0110050:five_prime_UTR 35.0%
!! ATGATGGATCTTGTTATTGG+TGG + chr1_3:22415078-22415097 Msa0110050:CDS 35.0%
TTCAAACTTGGGAGGAAAAT+TGG + chr1_3:22415105-22415124 Msa0110050:CDS 35.0%
AAAATTGGAAGTGGGTCATT+TGG + chr1_3:22415120-22415139 Msa0110050:CDS 35.0%
TGTTAATGTGCAAACTCAAG+AGG + chr1_3:22415248-22415267 Msa0110050:CDS 35.0%
!! AGTTTTGACCTGAATTGTGT+TGG + chr1_3:22415451-22415470 Msa0110050:intron 35.0%
GAGTAATAAGGAGATCATGA+TGG - chr1_3:22415550-22415569 None:intergenic 35.0%
ATGATGAGTAGAGTTTGGTA+GGG + chr1_3:22415612-22415631 Msa0110050:intron 35.0%
ACAGGTATATTGTCCAATTG+CGG - chr1_3:22415661-22415680 None:intergenic 35.0%
AATGTAATCACATGTGACAC+TGG - chr1_3:22415722-22415741 None:intergenic 35.0%
CTGTGTCAATGCTTCATTAT+CGG + chr1_3:22415793-22415812 Msa0110050:intron 35.0%
GAAAATGCAGGTAATGTGTA+TGG - chr1_3:22415877-22415896 None:intergenic 35.0%
CATAATTAAGCAGACTCATG+TGG - chr1_3:22415983-22416002 None:intergenic 35.0%
GTATACTTCTATTAGGCATG+TGG + chr1_3:22416094-22416113 Msa0110050:intron 35.0%
AATCCAAAATAAGTACCCAC+TGG + chr1_3:22416320-22416339 Msa0110050:intron 35.0%
AAATGGAATGAAAAGCCAGT+GGG - chr1_3:22416338-22416357 None:intergenic 35.0%
AATGACACTGTCTCAAAGTT+GGG + chr1_3:22416450-22416469 Msa0110050:intron 35.0%
!! TTTGGCTTTGTGCTTTATGA+TGG + chr1_3:22416493-22416512 Msa0110050:intron 35.0%
GCACTTCGAGAAAAAAACTT+AGG - chr1_3:22416533-22416552 None:intergenic 35.0%
TTGTATATGCTTCTTCAAGG+AGG + chr1_3:22416651-22416670 Msa0110050:CDS 35.0%
!! CCAAAAGCGTTGTTAAATAG+CGG + chr1_3:22416731-22416750 Msa0110050:intron 35.0%
GTTGTCAAACAGTGCTATAA+CGG + chr1_3:22416830-22416849 Msa0110050:intron 35.0%
ATGTAAACAGATGCAAATCC+TGG - chr1_3:22416931-22416950 None:intergenic 35.0%
CTGGAATACCTCATATAAAG+TGG + chr1_3:22417011-22417030 Msa0110050:CDS 35.0%
ATACCTCATATAAAGTGGTC+TGG + chr1_3:22417016-22417035 Msa0110050:CDS 35.0%
CTCTGTTTATCTAGGTAAAG+TGG - chr1_3:22417246-22417265 None:intergenic 35.0%
AAACCCATCAGAAAATTGTC+GGG - chr1_3:22417313-22417332 None:intergenic 35.0%
!!! GACAATTTTCTGATGGGTTT+AGG + chr1_3:22417313-22417332 Msa0110050:CDS 35.0%
CTATTTCCGATGTCAATTAC+AGG + chr1_3:22417495-22417514 Msa0110050:intron 35.0%
!!! GATCACGATACTTTTTTGCA+AGG - chr1_3:22417728-22417747 None:intergenic 35.0%
CACATAAGCATATACCATAC+AGG + chr1_3:22417754-22417773 Msa0110050:CDS 35.0%
AACTGTAGAAAGATGAGACA+GGG - chr1_3:22417844-22417863 None:intergenic 35.0%
TAACTGTAGAAAGATGAGAC+AGG - chr1_3:22417845-22417864 None:intergenic 35.0%
GCACAAAACTCAATGAAAAC+TGG - chr1_3:22418025-22418044 None:intergenic 35.0%
! AGAGATGATCTAGAATCACT+TGG + chr1_3:22418398-22418417 Msa0110050:CDS 35.0%
!! GTACTCATGTACTTTTTGAG+AGG + chr1_3:22418425-22418444 Msa0110050:CDS 35.0%
!! TCATGTACTTTTTGAGAGGA+AGG + chr1_3:22418429-22418448 Msa0110050:CDS 35.0%
!! TTTTTGAGAGGAAGGTTAGT+TGG + chr1_3:22418437-22418456 Msa0110050:intron 35.0%
GAAAATGCTTACTCCAATAG+AGG + chr1_3:22418594-22418613 Msa0110050:CDS 35.0%
!! AAGCATTGAAGTACCTCTAT+TGG - chr1_3:22418610-22418629 None:intergenic 35.0%
AATACTCTACTTCGATGCTT+TGG + chr1_3:22418641-22418660 Msa0110050:intron 35.0%
! ACTTCGATGCTTTGGATAAT+TGG + chr1_3:22418649-22418668 Msa0110050:intron 35.0%
TAATTGGTTATGTCAGGATG+AGG + chr1_3:22418665-22418684 Msa0110050:intron 35.0%
TGCATGATGCAGAAACATAA+TGG - chr1_3:22418771-22418790 None:intergenic 35.0%
ACAGTTTGGATTTCTGTAAC+AGG + chr1_3:22418904-22418923 Msa0110050:intron 35.0%
TATCTTCAAACCGCAATGAT+CGG - chr1_3:22418979-22418998 None:intergenic 35.0%
CATATCTTAAGAGACTCTTC+CGG + chr1_3:22419011-22419030 Msa0110050:CDS 35.0%
ATATCTTAAGAGACTCTTCC+GGG + chr1_3:22419012-22419031 Msa0110050:CDS 35.0%
GATAACCTTCTCGAATGAAT+AGG - chr1_3:22419039-22419058 None:intergenic 35.0%
GCTAGGATAACTTTCAACTA+AGG - chr1_3:22419087-22419106 None:intergenic 35.0%
! AGTAAGGTACTTTCAAAGCT+AGG - chr1_3:22419104-22419123 None:intergenic 35.0%
!! TTTAAGACTGGTTTCACACT+TGG - chr1_3:22419306-22419325 None:intergenic 35.0%
TGCAATAGGAATAAACCTGA+AGG - chr1_3:22419360-22419379 None:intergenic 35.0%
AGAAACACTAACCACATCTT+TGG - chr1_3:22419738-22419757 None:intergenic 35.0%
! AATTTCTTGTTGTCCAACAC+TGG + chr1_3:22419842-22419861 Msa0110050:intron 35.0%
AAATAAGCGAAAACTGTCGA+CGG + chr1_3:22420148-22420167 Msa0110050:exon 35.0%
GTAAAATGAACAGGTGTGAA+GGG - chr1_3:22420212-22420231 None:intergenic 35.0%
AGTAAAATGAACAGGTGTGA+AGG - chr1_3:22420213-22420232 None:intergenic 35.0%
!!! AATTAGCTTTTGGCCATGAA+TGG - chr1_3:22420263-22420282 None:intergenic 35.0%
CTTCCATGATTATCTAAGCT+TGG + chr1_3:22420335-22420354 Msa0110050:three_prime_UTR 35.0%
GAACCAAGCTTAGATAATCA+TGG - chr1_3:22420341-22420360 None:intergenic 35.0%
TGGAGTGTGTGTTTAACAAA+CGG - chr1_3:22420740-22420759 None:intergenic 35.0%
CTGGAGTAGAACCAAGTAAA+AGG + chr1_3:22414894-22414913 Msa0110050:five_prime_UTR 40.0%
GTGGAAAATTCAAACTTGGG+AGG + chr1_3:22415097-22415116 Msa0110050:CDS 40.0%
TTGGGAGGAAAATTGGAAGT+GGG + chr1_3:22415112-22415131 Msa0110050:CDS 40.0%
AGCAATCACCAACACAATTC+AGG - chr1_3:22415462-22415481 None:intergenic 40.0%
!! TGTGTTGGTGATTGCTTACT+AGG + chr1_3:22415466-22415485 Msa0110050:intron 40.0%
! CGATGATGATGAGTAGAGTT+TGG + chr1_3:22415607-22415626 Msa0110050:intron 40.0%
GATGATGAGTAGAGTTTGGT+AGG + chr1_3:22415611-22415630 Msa0110050:intron 40.0%
CAGGTATATTGTCCAATTGC+GGG - chr1_3:22415660-22415679 None:intergenic 40.0%
! GCACAGACACTTTTGATCAA+AGG + chr1_3:22415691-22415710 Msa0110050:intron 40.0%
CAATGCTTCATTATCGGCAT+TGG + chr1_3:22415799-22415818 Msa0110050:intron 40.0%
GTCATGCATATAGACACAAG+GGG - chr1_3:22415961-22415980 None:intergenic 40.0%
GGTCATGCATATAGACACAA+GGG - chr1_3:22415962-22415981 None:intergenic 40.0%
TGGTCATGCATATAGACACA+AGG - chr1_3:22415963-22415982 None:intergenic 40.0%
ATTAGGCATGTGGTTGAAAC+TGG + chr1_3:22416104-22416123 Msa0110050:intron 40.0%
AAGCTCTTGAACATCTTGGT+GGG - chr1_3:22416279-22416298 None:intergenic 40.0%
! AAGCCAGTGGGTACTTATTT+TGG - chr1_3:22416326-22416345 None:intergenic 40.0%
GAAATGGAATGAAAAGCCAG+TGG - chr1_3:22416339-22416358 None:intergenic 40.0%
!! CAACTTTGAGACAGTGTCAT+TGG - chr1_3:22416451-22416470 None:intergenic 40.0%
CAATGACACTGTCTCAAAGT+TGG + chr1_3:22416449-22416468 Msa0110050:intron 40.0%
!!! TACGTTTTCATTGGCTTCTC+AGG + chr1_3:22416584-22416603 Msa0110050:intron 40.0%
! CCGCTATTTAACAACGCTTT+TGG - chr1_3:22416734-22416753 None:intergenic 40.0%
ATAGCAGCGCTATAGTTTAG+TGG + chr1_3:22416756-22416775 Msa0110050:intron 40.0%
ACTCCAGACCACTTTATATG+AGG - chr1_3:22417022-22417041 None:intergenic 40.0%
! TATAAAGTGGTCTGGAGTTG+AGG + chr1_3:22417024-22417043 Msa0110050:CDS 40.0%
! ATAAAGTGGTCTGGAGTTGA+GGG + chr1_3:22417025-22417044 Msa0110050:CDS 40.0%
GAGTAGAGTATATGCACTCT+CGG + chr1_3:22417263-22417282 Msa0110050:CDS 40.0%
AGTAGAGTATATGCACTCTC+GGG + chr1_3:22417264-22417283 Msa0110050:CDS 40.0%
! AAAGCCCGACAATTTTCTGA+TGG + chr1_3:22417306-22417325 Msa0110050:CDS 40.0%
! AAGCCCGACAATTTTCTGAT+GGG + chr1_3:22417307-22417326 Msa0110050:CDS 40.0%
! TAGATACCTGATTTGCCTTG+CGG - chr1_3:22417339-22417358 None:intergenic 40.0%
TTGAAGAATGCCAGTTAGAG+AGG - chr1_3:22417429-22417448 None:intergenic 40.0%
! ACTGGCATTCTTCAAGTTCT+AGG + chr1_3:22417434-22417453 Msa0110050:intron 40.0%
! GGTGCTGCCAAAAGAAATAA+AGG - chr1_3:22417605-22417624 None:intergenic 40.0%
AGACAGGGACAATATACTCA+AGG - chr1_3:22417829-22417848 None:intergenic 40.0%
TTCCACTCCTGTTACATGAA+TGG + chr1_3:22418160-22418179 Msa0110050:intron 40.0%
AACCATTCATGTAACAGGAG+TGG - chr1_3:22418165-22418184 None:intergenic 40.0%
AGTGCAACCATTCATGTAAC+AGG - chr1_3:22418170-22418189 None:intergenic 40.0%
AGGGAAAACAAGAATCTCAC+TGG + chr1_3:22418204-22418223 Msa0110050:intron 40.0%
! TTTCTTTTTCCAGCCTTCCA+TGG + chr1_3:22418518-22418537 Msa0110050:intron 40.0%
CTAGAACTGGATCCAATTTG+TGG - chr1_3:22419190-22419209 None:intergenic 40.0%
!! TTGGATCCAGTTCTAGAACA+CGG + chr1_3:22419194-22419213 Msa0110050:CDS 40.0%
AGATAGATTATCAGGTGCAG+TGG + chr1_3:22419643-22419662 Msa0110050:CDS 40.0%
GATAGATTATCAGGTGCAGT+GGG + chr1_3:22419644-22419663 Msa0110050:CDS 40.0%
ATAGATTATCAGGTGCAGTG+GGG + chr1_3:22419645-22419664 Msa0110050:CDS 40.0%
! CTAACCACATCTTTGGAAGA+CGG - chr1_3:22419731-22419750 None:intergenic 40.0%
TTGCTACAAAGATCCAGTGT+TGG - chr1_3:22419858-22419877 None:intergenic 40.0%
TGTAGCAACCTGATTCTGAT+AGG + chr1_3:22419870-22419889 Msa0110050:intron 40.0%
GTAGCAACCTGATTCTGATA+GGG + chr1_3:22419871-22419890 Msa0110050:intron 40.0%
GTAATGGCAGTGCTTCAAAA+AGG + chr1_3:22419909-22419928 Msa0110050:CDS 40.0%
! GGTCTGCTACTTGATATCAT+AGG - chr1_3:22419935-22419954 None:intergenic 40.0%
! GATGATTTGGATTCAAGACC+AGG - chr1_3:22420043-22420062 None:intergenic 40.0%
!! GCATCTGAAGAAGCATTTGA+GGG - chr1_3:22420314-22420333 None:intergenic 40.0%
!! AGCATCTGAAGAAGCATTTG+AGG - chr1_3:22420315-22420334 None:intergenic 40.0%
TATCACCCTTCCATTGCATT+TGG + chr1_3:22420498-22420517 Msa0110050:three_prime_UTR 40.0%
ATCACCCTTCCATTGCATTT+GGG + chr1_3:22420499-22420518 Msa0110050:three_prime_UTR 40.0%
GGTGGCTCCTAATTTAGATT+GGG + chr1_3:22420537-22420556 Msa0110050:three_prime_UTR 40.0%
GTGGCTCCTAATTTAGATTG+GGG + chr1_3:22420538-22420557 Msa0110050:three_prime_UTR 40.0%
! GGAAGTGTGAATGATTGTGG+TGG - chr1_3:22414694-22414713 None:intergenic 45.0%
TAAGGATTTGGATCTGTGCG+TGG - chr1_3:22414787-22414806 None:intergenic 45.0%
CAGAGAGAAGGGTAAGGATT+TGG - chr1_3:22414799-22414818 None:intergenic 45.0%
CGATATTGACGCAGAGAGAA+GGG - chr1_3:22414810-22414829 None:intergenic 45.0%
CTTGGGAGGAAAATTGGAAG+TGG + chr1_3:22415111-22415130 Msa0110050:CDS 45.0%
TGTGCAAACTCAAGAGGAAG+TGG + chr1_3:22415254-22415273 Msa0110050:CDS 45.0%
GCTGGTGAGTGAAGTTGTTA+TGG + chr1_3:22415284-22415303 Msa0110050:intron 45.0%
CTTTCTCTCTTACCCGCAAT+TGG + chr1_3:22415645-22415664 Msa0110050:intron 45.0%
!! CAAAAGTGTCTGTGCTACAG+TGG - chr1_3:22415686-22415705 None:intergenic 45.0%
GTGTATGGGTACAGGTACTT+AGG - chr1_3:22415862-22415881 None:intergenic 45.0%
CAGGTAATGTGTATGGGTAC+AGG - chr1_3:22415870-22415889 None:intergenic 45.0%
CAAGCTCTTGAACATCTTGG+TGG - chr1_3:22416280-22416299 None:intergenic 45.0%
CACCAAGATGTTCAAGAGCT+TGG + chr1_3:22416278-22416297 Msa0110050:intron 45.0%
GACCAAGCTCTTGAACATCT+TGG - chr1_3:22416283-22416302 None:intergenic 45.0%
TGAGGATGCTTTGTCTTCAC+AGG - chr1_3:22416612-22416631 None:intergenic 45.0%
TTGGACTCGTAGAGAAGTTG+AGG - chr1_3:22416630-22416649 None:intergenic 45.0%
ACTTGGTCCAAGAAGGTCAA+TGG - chr1_3:22417068-22417087 None:intergenic 45.0%
GTAGAGTATATGCACTCTCG+GGG + chr1_3:22417265-22417284 Msa0110050:CDS 45.0%
GCATGACATACCTCTCTAAC+TGG + chr1_3:22417416-22417435 Msa0110050:intron 45.0%
GCAAGTGTTAACACTCACCT+TGG + chr1_3:22418240-22418259 Msa0110050:CDS 45.0%
GTTAACACTCACCTTGGAGT+TGG + chr1_3:22418246-22418265 Msa0110050:CDS 45.0%
CTTTCATTCCTTGCCATGGA+AGG - chr1_3:22418534-22418553 None:intergenic 45.0%
TCCACTATTGCCGATCATTG+CGG + chr1_3:22418966-22418985 Msa0110050:CDS 45.0%
CTTCTCGAATGAATAGGTCC+CGG - chr1_3:22419033-22419052 None:intergenic 45.0%
!! TGGATCCAGTTCTAGAACAC+GGG + chr1_3:22419195-22419214 Msa0110050:CDS 45.0%
!! ACTAACCCGTGTTCTAGAAC+TGG - chr1_3:22419203-22419222 None:intergenic 45.0%
GTGAAACCAGTCTTAAACCC+AGG + chr1_3:22419309-22419328 Msa0110050:CDS 45.0%
CATCTGGAGAGCGATTAGAA+CGG + chr1_3:22419334-22419353 Msa0110050:CDS 45.0%
TAGATTATCAGGTGCAGTGG+GGG + chr1_3:22419646-22419665 Msa0110050:CDS 45.0%
TATGCCGTCTTCCAAAGATG+TGG + chr1_3:22419724-22419743 Msa0110050:CDS 45.0%
TCGAGATCAATCGACTAGAC+CGG - chr1_3:22419985-22420004 None:intergenic 45.0%
! TCGTCTATCGACTACTCAGA+GGG + chr1_3:22420012-22420031 Msa0110050:CDS 45.0%
!! AGCTTTGAGCTCCTGTCAAT+TGG + chr1_3:22420112-22420131 Msa0110050:CDS 45.0%
! TTTTCCCGGTACCAATTGAC+AGG - chr1_3:22420126-22420145 None:intergenic 45.0%
AAATGAACAGGTGTGAAGGG+TGG - chr1_3:22420209-22420228 None:intergenic 45.0%
! ATTTGGGACCCCTCTAATAG+TGG + chr1_3:22420515-22420534 Msa0110050:three_prime_UTR 45.0%
! TTTGGGACCCCTCTAATAGT+GGG + chr1_3:22420516-22420535 Msa0110050:three_prime_UTR 45.0%
GGGTGGCTCCTAATTTAGAT+TGG + chr1_3:22420536-22420555 Msa0110050:three_prime_UTR 45.0%
! AGAATGTTTGGAGCCTCCTT+AGG + chr1_3:22420593-22420612 Msa0110050:three_prime_UTR 45.0%
!! AAAAAAAAAAAAAATCTAAT+GGG - chr1_3:22414840-22414859 None:intergenic 5.0%
!! AAAAAAAAAAAAAAATCTAA+TGG - chr1_3:22414841-22414860 None:intergenic 5.0%
!!! TTTTTTTTAAAAATAAACTT+CGG + chr1_3:22415753-22415772 Msa0110050:intron 5.0%
!!! AGTATTTTTATTAAATTATT+AGG - chr1_3:22416398-22416417 None:intergenic 5.0%
!!! TTTATTTTAAGTAAAAAATA+TGG - chr1_3:22418814-22418833 None:intergenic 5.0%
TTGACGCAGAGAGAAGGGTA+AGG - chr1_3:22414805-22414824 None:intergenic 50.0%
GCGATATTGACGCAGAGAGA+AGG - chr1_3:22414811-22414830 None:intergenic 50.0%
AGAGGAAGTGGCTGTTAAGC+TGG + chr1_3:22415266-22415285 Msa0110050:CDS 50.0%
GTCTGTGCTACAGTGGATAC+AGG - chr1_3:22415679-22415698 None:intergenic 50.0%
ACAGTGCTATAACGGCGCTA+TGG + chr1_3:22416838-22416857 Msa0110050:intron 50.0%
GCTATGGCACTATTGCGTAG+CGG + chr1_3:22416854-22416873 Msa0110050:intron 50.0%
TGAGGGCGAGTACAATGTCA+TGG + chr1_3:22417042-22417061 Msa0110050:CDS 50.0%
GTCATGGCCATTGACCTTCT+TGG + chr1_3:22417058-22417077 Msa0110050:CDS 50.0%
! CTTCGAGACTTGGTCCAAGA+AGG - chr1_3:22417075-22417094 None:intergenic 50.0%
TTTAGGCCGCAAGGCAAATC+AGG + chr1_3:22417330-22417349 Msa0110050:CDS 50.0%
! TTTTCCAGCCTTCCATGGCA+AGG + chr1_3:22418523-22418542 Msa0110050:intron 50.0%
CCAGCTTTCATTCCTTGCCA+TGG - chr1_3:22418538-22418557 None:intergenic 50.0%
CCATGGCAAGGAATGAAAGC+TGG + chr1_3:22418535-22418554 Msa0110050:CDS 50.0%
ACCGCAATGATCGGCAATAG+TGG - chr1_3:22418970-22418989 None:intergenic 50.0%
CGGGACCTATTCATTCGAGA+AGG + chr1_3:22419031-22419050 Msa0110050:CDS 50.0%
! GATGGTCCTGGGTTTAAGAC+TGG - chr1_3:22419318-22419337 None:intergenic 50.0%
GTCTTAAACCCAGGACCATC+TGG + chr1_3:22419318-22419337 Msa0110050:CDS 50.0%
CGTTCTAATCGCTCTCCAGA+TGG - chr1_3:22419336-22419355 None:intergenic 50.0%
!!! CAGTGGGGGCATTTTCAAGA+AGG + chr1_3:22419660-22419679 Msa0110050:CDS 50.0%
GCTCGCAGTTCTACTCGTAA+TGG + chr1_3:22419893-22419912 Msa0110050:CDS 50.0%
AGTAGCAGACCAAGCTCTTC+TGG + chr1_3:22419944-22419963 Msa0110050:CDS 50.0%
GTAGCAGACCAAGCTCTTCT+GGG + chr1_3:22419945-22419964 Msa0110050:CDS 50.0%
TAGCAGACCAAGCTCTTCTG+GGG + chr1_3:22419946-22419965 Msa0110050:CDS 50.0%
! GTCGTCTATCGACTACTCAG+AGG + chr1_3:22420011-22420030 Msa0110050:CDS 50.0%
ACTACTCAGAGGGTTCAACC+TGG + chr1_3:22420022-22420041 Msa0110050:CDS 50.0%
GGTACGGGTGAAGGATGATT+TGG - chr1_3:22420056-22420075 None:intergenic 50.0%
GAGCTCCTGTCAATTGGTAC+CGG + chr1_3:22420118-22420137 Msa0110050:CDS 50.0%
AGCTCCTGTCAATTGGTACC+GGG + chr1_3:22420119-22420138 Msa0110050:CDS 50.0%
CCATGAATGGACCACAACAC+AGG - chr1_3:22420250-22420269 None:intergenic 50.0%
CCTGTGTTGTGGTCCATTCA+TGG + chr1_3:22420247-22420266 Msa0110050:three_prime_UTR 50.0%
GGGTCCCAAATGCAATGGAA+GGG - chr1_3:22420506-22420525 None:intergenic 50.0%
TAGAGGGGTCCCAAATGCAA+TGG - chr1_3:22420511-22420530 None:intergenic 50.0%
AGGAGCCACCCACTATTAGA+GGG - chr1_3:22420527-22420546 None:intergenic 50.0%
TAGGAGCCACCCACTATTAG+AGG - chr1_3:22420528-22420547 None:intergenic 50.0%
GGATTTGGATCTGTGCGTGG+AGG - chr1_3:22414784-22414803 None:intergenic 55.0%
CGGTACGCAATTGACAGCAC+TGG + chr1_3:22416902-22416921 Msa0110050:intron 55.0%
!! AATTGACAGCACTGGCAGCC+AGG + chr1_3:22416910-22416929 Msa0110050:intron 55.0%
!! TCTGATGGGTTTAGGCCGCA+AGG + chr1_3:22417321-22417340 Msa0110050:CDS 55.0%
!! CACCTTGGAGTTGGTGAGTG+AGG + chr1_3:22418255-22418274 Msa0110050:intron 55.0%
TGCCTCACTCACCAACTCCA+AGG - chr1_3:22418260-22418279 None:intergenic 55.0%
CATTCCTTGCCATGGAAGGC+TGG - chr1_3:22418530-22418549 None:intergenic 55.0%
ATCGCTCTCCAGATGGTCCT+GGG - chr1_3:22419329-22419348 None:intergenic 55.0%
AATCGCTCTCCAGATGGTCC+TGG - chr1_3:22419330-22419349 None:intergenic 55.0%
GAGCGATTAGAACGGCCTTC+AGG + chr1_3:22419342-22419361 Msa0110050:CDS 55.0%
CTGCGAGCCCTATCAGAATC+AGG - chr1_3:22419881-22419900 None:intergenic 55.0%
CTAGGTTCCCCAGAAGAGCT+TGG - chr1_3:22419956-22419975 None:intergenic 55.0%
CTGGGGAACCTAGTGAAAGC+CGG + chr1_3:22419963-22419982 Msa0110050:CDS 55.0%
! CGACTAGACCGGCTTTCACT+AGG - chr1_3:22419974-22419993 None:intergenic 55.0%
GGGGTCCCAAATGCAATGGA+AGG - chr1_3:22420507-22420526 None:intergenic 55.0%
GGAGCCACCCACTATTAGAG+GGG - chr1_3:22420526-22420545 None:intergenic 55.0%
GGATCTGTGCGTGGAGGTGA+AGG - chr1_3:22414778-22414797 None:intergenic 60.0%
CTGCGCAAGGACTGCAGCAT+AGG + chr1_3:22419690-22419709 Msa0110050:CDS 60.0%
TCATCCTTCACCCGTACCGC+AGG + chr1_3:22420058-22420077 Msa0110050:CDS 60.0%
CATCCTTCACCCGTACCGCA+GGG + chr1_3:22420059-22420078 Msa0110050:CDS 60.0%
! GGGACCCCTCTAATAGTGGG+TGG + chr1_3:22420519-22420538 Msa0110050:three_prime_UTR 60.0%
TGTCCCTGCGGTACGGGTGA+AGG - chr1_3:22420065-22420084 None:intergenic 65.0%
ACCTCGTGTCCCTGCGGTAC+GGG - chr1_3:22420071-22420090 None:intergenic 65.0%
CACCTCGTGTCCCTGCGGTA+CGG - chr1_3:22420072-22420091 None:intergenic 65.0%
ACCCGTACCGCAGGGACACG+AGG + chr1_3:22420067-22420086 Msa0110050:CDS 70.0%
CGTACCGCAGGGACACGAGG+TGG + chr1_3:22420070-22420089 Msa0110050:CDS 70.0%
GCGACCACCTCGTGTCCCTG+CGG - chr1_3:22420077-22420096 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 22414687 22420781 22414687 ID=Msa0110050;Name=Msa0110050
chr1_3 mRNA 22414687 22420781 22414687 ID=Msa0110050-mRNA-1;Parent=Msa0110050;Name=Msa0110050-mRNA-1;_AED=0.17;_eAED=0.17;_QI=391|1|1|1|1|1|14|628|458
chr1_3 exon 22414687 22415156 22414687 ID=Msa0110050-mRNA-1:exon:7960;Parent=Msa0110050-mRNA-1
chr1_3 exon 22415247 22415287 22415247 ID=Msa0110050-mRNA-1:exon:7961;Parent=Msa0110050-mRNA-1
chr1_3 exon 22416606 22416675 22416606 ID=Msa0110050-mRNA-1:exon:7962;Parent=Msa0110050-mRNA-1
chr1_3 exon 22417011 22417159 22417011 ID=Msa0110050-mRNA-1:exon:7963;Parent=Msa0110050-mRNA-1
chr1_3 exon 22417256 22417351 22417256 ID=Msa0110050-mRNA-1:exon:7964;Parent=Msa0110050-mRNA-1
chr1_3 exon 22417705 22417775 22417705 ID=Msa0110050-mRNA-1:exon:7965;Parent=Msa0110050-mRNA-1
chr1_3 exon 22418206 22418267 22418206 ID=Msa0110050-mRNA-1:exon:7966;Parent=Msa0110050-mRNA-1
chr1_3 exon 22418387 22418450 22418387 ID=Msa0110050-mRNA-1:exon:7967;Parent=Msa0110050-mRNA-1
chr1_3 exon 22418531 22418615 22418531 ID=Msa0110050-mRNA-1:exon:7968;Parent=Msa0110050-mRNA-1
chr1_3 exon 22418926 22419052 22418926 ID=Msa0110050-mRNA-1:exon:7969;Parent=Msa0110050-mRNA-1
chr1_3 exon 22419143 22419216 22419143 ID=Msa0110050-mRNA-1:exon:7970;Parent=Msa0110050-mRNA-1
chr1_3 exon 22419303 22419363 22419303 ID=Msa0110050-mRNA-1:exon:7971;Parent=Msa0110050-mRNA-1
chr1_3 exon 22419627 22419745 22419627 ID=Msa0110050-mRNA-1:exon:7972;Parent=Msa0110050-mRNA-1
chr1_3 exon 22419875 22420781 22419875 ID=Msa0110050-mRNA-1:exon:7973;Parent=Msa0110050-mRNA-1
chr1_3 five_prime_UTR 22414687 22415077 22414687 ID=Msa0110050-mRNA-1:five_prime_utr;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22415078 22415156 22415078 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22415247 22415287 22415247 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22416606 22416675 22416606 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22417011 22417159 22417011 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22417256 22417351 22417256 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22417705 22417775 22417705 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22418206 22418267 22418206 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22418387 22418450 22418387 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22418531 22418615 22418531 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22418926 22419052 22418926 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22419143 22419216 22419143 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22419303 22419363 22419303 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22419627 22419745 22419627 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 CDS 22419875 22420153 22419875 ID=Msa0110050-mRNA-1:cds;Parent=Msa0110050-mRNA-1
chr1_3 three_prime_UTR 22420154 22420781 22420154 ID=Msa0110050-mRNA-1:three_prime_utr;Parent=Msa0110050-mRNA-1
Gene Sequence

>Msa0110050

ATGATGGATCTTGTTATTGGTGGAAAATTCAAACTTGGGAGGAAAATTGGAAGTGGGTCATTTGGAGAAATTTATTTGGGTGTTAATGTGCAAACTCAAGAGGAAGTGGCTGTTAAGCTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTACGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACTGGAATACCTCATATAAAGTGGTCTGGAGTTGAGGGCGAGTACAATGTCATGGCCATTGACCTTCTTGGACCAAGTCTCGAAGACTTATTTAACTATTGTAGTAGAAAATTCTCTCTTAAGACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAATTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTACGGCCTTGCAAAAAAGTATCGTGATCTTCAGACACATAAGCATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAGCAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTCATGTACTTTTTGAGAGGAAGCCTTCCATGGCAAGGAATGAAAGCTGGCACTAAAAAGCAGAAATACGACAAGATAAGTGAAAAGAAAATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGTGTGAAACCAGTCTTAAACCCAGGACCATCTGGAGAGCGATTAGAACGGCCTTCAGTCGGACAAGAAATTCGAGATAGATTATCAGGTGCAGTGGGGGCATTTTCAAGAAGGAATGGGTCTGCGCAAGGACTGCAGCATAGGTCTCTAGATAATATGCCGTCTTCCAAAGATGTGCAACCTGATTCTGATAGGGCTCGCAGTTCTACTCGTAATGGCAGTGCTTCAAAAAGGCCTATGATATCAAGTAGCAGACCAAGCTCTTCTGGGGAACCTAGTGAAAGCCGGTCTAGTCGATTGATCTCGAGCAGTAGTCGTCTATCGACTACTCAGAGGGTTCAACCTGGTCTTGAATCCAAATCATCCTTCACCCGTACCGCAGGGACACGAGGTGGTCGCGATGATACACTCAAGAGCTTTGAGCTCCTGTCAATTGGTACCGGGAAAAGAAAATAA
Protein sequence

>Msa0110050

MMDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGEYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPGPSGERLERPSVGQEIRDRLSGAVGAFSRRNGSAQGLQHRSLDNMPSSKDVQPDSDRARSSTRNGSASKRPMISSSRPSSSGEPSESRSSRLISSSSRLSTTQRVQPGLESKSSFTRTAGTRGGRDDTLKSFELLSIGTGKRK*