Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112950 | XP_024630388.1 | 85.811 | 296 | 39 | 1 | 20 | 312 | 89 | 384 | 5.32e-170 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112950 | A0A396JPU6 | 77.023 | 309 | 59 | 3 | 20 | 316 | 87 | 395 | 3.07e-158 | 457 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0112950 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0112950 | MtrunA17_Chr1g0163201 | 77.023 | 309 | 59 | 3 | 20 | 316 | 87 | 395 | 5.92e-162 | 457 |
| Msa0112950 | MtrunA17_Chr1g0163181 | 65.607 | 346 | 68 | 5 | 20 | 316 | 89 | 432 | 1.31e-149 | 427 |
| Msa0112950 | MtrunA17_Chr1g0163151 | 72.523 | 222 | 61 | 0 | 93 | 314 | 1 | 222 | 2.33e-118 | 340 |
| Msa0112950 | MtrunA17_Chr1g0163111 | 67.932 | 237 | 59 | 3 | 93 | 317 | 1 | 232 | 6.35e-109 | 316 |
| Msa0112950 | MtrunA17_Chr1g0163251 | 40.741 | 243 | 104 | 5 | 20 | 246 | 89 | 307 | 2.05e-46 | 161 |
| Msa0112950 | MtrunA17_Chr6g0476171 | 40.553 | 217 | 124 | 4 | 102 | 313 | 29 | 245 | 7.00e-45 | 153 |
| Msa0112950 | MtrunA17_Chr1g0162151 | 40.351 | 228 | 112 | 5 | 93 | 315 | 1 | 209 | 4.93e-43 | 147 |
| Msa0112950 | MtrunA17_Chr1g0163261 | 37.681 | 207 | 115 | 2 | 20 | 217 | 93 | 294 | 2.57e-37 | 135 |
| Msa0112950 | MtrunA17_Chr1g0163231 | 41.837 | 196 | 98 | 8 | 20 | 207 | 93 | 280 | 4.44e-34 | 126 |
| Msa0112950 | MtrunA17_Chr1g0171611 | 42.786 | 201 | 77 | 7 | 20 | 207 | 93 | 268 | 1.22e-30 | 117 |
| Msa0112950 | MtrunA17_Chr1g0163091 | 41.958 | 143 | 77 | 2 | 93 | 230 | 1 | 142 | 1.95e-30 | 113 |
| Msa0112950 | MtrunA17_Chr1g0163131 | 39.394 | 132 | 73 | 4 | 188 | 315 | 180 | 308 | 2.43e-20 | 89.4 |
| Msa0112950 | MtrunA17_Chr1g0163191 | 80.282 | 71 | 11 | 1 | 20 | 87 | 89 | 159 | 1.05e-18 | 81.6 |
| Msa0112950 | MtrunA17_Chr8g0390841 | 32.394 | 142 | 81 | 7 | 79 | 217 | 214 | 343 | 4.28e-13 | 69.7 |
| Msa0112950 | MtrunA17_Chr1g0163241 | 57.576 | 66 | 19 | 2 | 20 | 84 | 91 | 148 | 7.20e-12 | 62.8 |
| Msa0112950 | MtrunA17_Chr3g0131891 | 28.155 | 206 | 122 | 8 | 20 | 206 | 105 | 303 | 1.53e-11 | 64.3 |
| Msa0112950 | MtrunA17_Chr1g0208771 | 32.624 | 141 | 78 | 5 | 86 | 223 | 181 | 307 | 8.58e-11 | 62.8 |
| Msa0112950 | MtrunA17_Chr7g0233521 | 31.500 | 200 | 118 | 8 | 19 | 206 | 71 | 263 | 8.73e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGGGATTGCTTCGTTTC+CGG | 0.165431 | 1_3:+28643378 | None:intergenic |
| TTAAAACCTTGTAGTTTCTT+TGG | 0.217113 | 1_3:+28643361 | None:intergenic |
| TTCTTCAACTGATTTGATAT+TGG | 0.254866 | 1_3:+28644335 | None:intergenic |
| ATTGTCCTTTGAGCTTTCTT+TGG | 0.254871 | 1_3:+28644219 | None:intergenic |
| TTAATGGAACTGTAACAATA+AGG | 0.273629 | 1_3:-28643579 | Msa0112950:CDS |
| GCATAACACATTCAAGGTTT+TGG | 0.294441 | 1_3:-28642908 | Msa0112950:CDS |
| AAATATTGTGGAGTTGAAAA+TGG | 0.298192 | 1_3:-28642736 | Msa0112950:CDS |
| AAAGCTCAAAGGACAATAAA+TGG | 0.303877 | 1_3:-28644213 | Msa0112950:CDS |
| TAAAACCTTGTAGTTTCTTT+GGG | 0.320506 | 1_3:+28643362 | None:intergenic |
| GTGGTGGTTGGAAAATATTC+AGG | 0.328531 | 1_3:-28643489 | Msa0112950:CDS |
| TTACAAAGAAAGATCTTGTT+TGG | 0.332547 | 1_3:-28643512 | Msa0112950:CDS |
| CATTAACAGCTTCAGATGTT+TGG | 0.351304 | 1_3:+28643772 | None:intergenic |
| TAATGGAACTGTAACAATAA+GGG | 0.353376 | 1_3:-28643578 | Msa0112950:CDS |
| GAGGTTAGTTTGAGGTATTA+TGG | 0.363534 | 1_3:-28643535 | Msa0112950:CDS |
| AATATTATTCTATGAAAATC+TGG | 0.366274 | 1_3:+28644721 | None:intergenic |
| ATAGTGACAGTGAATGAAAA+AGG | 0.401426 | 1_3:+28643409 | None:intergenic |
| ATAGTTTATTTCTAAAGTAT+TGG | 0.406626 | 1_3:+28644359 | None:intergenic |
| AGTATTCGTGGCTGCAAGTT+CGG | 0.424270 | 1_3:-28642675 | Msa0112950:CDS |
| TACAAAGAAAGATCTTGTTT+GGG | 0.433738 | 1_3:-28643511 | Msa0112950:CDS |
| AATATTGTGGAGTTGAAAAT+GGG | 0.451536 | 1_3:-28642735 | Msa0112950:CDS |
| AAGTGATGAAGAGAGTGATA+AGG | 0.461668 | 1_3:-28644250 | Msa0112950:CDS |
| AAAGAATGCAATGTGGAGAT+TGG | 0.464528 | 1_3:-28642630 | Msa0112950:CDS |
| CAAAGTGGCCATGGTGAAGA+AGG | 0.465563 | 1_3:-28643805 | Msa0112950:CDS |
| CGTGGCTGCAAGTTCGGTAA+AGG | 0.465915 | 1_3:-28642669 | Msa0112950:CDS |
| ATAAATATCCAGCACTTGAA+AGG | 0.474577 | 1_3:+28642488 | None:intergenic |
| TGTCATTATAACTTCAAAAG+AGG | 0.475259 | 1_3:+28643743 | None:intergenic |
| GGTGCTGAAGCCACTGAAGA+AGG | 0.489506 | 1_3:-28644312 | Msa0112950:CDS |
| GATGAAGCATAACACATTCA+AGG | 0.490908 | 1_3:-28642914 | Msa0112950:CDS |
| CCAAAGGAATTTATGAAAAG+AGG | 0.492978 | 1_3:-28642768 | Msa0112950:CDS |
| GATCTTGTTTGGGTGGTGGT+TGG | 0.501988 | 1_3:-28643501 | Msa0112950:CDS |
| GTCATTATAACTTCAAAAGA+GGG | 0.507540 | 1_3:+28643744 | None:intergenic |
| AATTATTATCAGAGTATTCG+TGG | 0.513075 | 1_3:-28642687 | Msa0112950:CDS |
| GGAGTGTGGAGGTTAGTTTG+AGG | 0.513468 | 1_3:-28643543 | Msa0112950:CDS |
| ACTTTCTTTACCTTCTTCAG+TGG | 0.514754 | 1_3:+28644302 | None:intergenic |
| GATGAGGAAGCCACTGAAGA+AGG | 0.517797 | 1_3:-28644279 | Msa0112950:CDS |
| ACTTTCTTCACCTTCTTCAG+TGG | 0.520796 | 1_3:+28644269 | None:intergenic |
| TAAATATCCAGCACTTGAAA+GGG | 0.527452 | 1_3:+28642489 | None:intergenic |
| AATATCAAATCAGTTGAAGA+AGG | 0.534035 | 1_3:-28644333 | Msa0112950:CDS |
| AGGATGTCATGGAAATATTG+TGG | 0.534496 | 1_3:-28642748 | Msa0112950:CDS |
| TTTATGAAAAGAGGATGTCA+TGG | 0.534842 | 1_3:-28642759 | Msa0112950:CDS |
| CAATAAGGGTTGGTAATGAA+AGG | 0.535875 | 1_3:-28643564 | Msa0112950:CDS |
| AATGGCAAGAGAAAATTCTC+AGG | 0.536390 | 1_3:-28644195 | Msa0112950:intron |
| TACCGTACAGAAGGTCATGA+TGG | 0.540870 | 1_3:-28642937 | Msa0112950:intron |
| AAAGAAAGATCTTGTTTGGG+TGG | 0.548816 | 1_3:-28643508 | Msa0112950:CDS |
| GCTGCAAGTTCGGTAAAGGT+TGG | 0.563561 | 1_3:-28642665 | Msa0112950:CDS |
| GAAAGATCTTGTTTGGGTGG+TGG | 0.568994 | 1_3:-28643505 | Msa0112950:CDS |
| TTTGGTGAAGAACACAGCCC+CGG | 0.573521 | 1_3:-28642890 | Msa0112950:intron |
| TGAAAATGGGGAGGAAGCCA+TGG | 0.575061 | 1_3:-28642722 | Msa0112950:CDS |
| GTATTTGCAGAGTGTACCAA+AGG | 0.583029 | 1_3:-28642784 | Msa0112950:intron |
| ACTGTCACTATTACTCGTGC+CGG | 0.586569 | 1_3:-28643397 | Msa0112950:CDS |
| ACTTACAAAGAAATAGCCAT+TGG | 0.588354 | 1_3:+28643710 | None:intergenic |
| AGGTTGTAACAAAGTGGCCA+TGG | 0.594476 | 1_3:-28643814 | Msa0112950:CDS |
| GCAATCCCAAAGAAACTACA+AGG | 0.598347 | 1_3:-28643367 | Msa0112950:intron |
| CTTTACAGGTTGTAACAAAG+TGG | 0.599398 | 1_3:-28643820 | Msa0112950:intron |
| AGAAGGTAAAGAAAGTGATG+AGG | 0.601536 | 1_3:-28644295 | Msa0112950:CDS |
| TGGTGGTTGGAAAATATTCA+GGG | 0.603185 | 1_3:-28643488 | Msa0112950:CDS |
| ATGACACAATCTTACACCAA+TGG | 0.609025 | 1_3:-28643726 | Msa0112950:CDS |
| GGTTGGTAATGAAAGGAGTG+TGG | 0.615653 | 1_3:-28643557 | Msa0112950:CDS |
| ACCGTACAGAAGGTCATGAT+GGG | 0.620074 | 1_3:-28642936 | Msa0112950:intron |
| GGAACTGTAACAATAAGGGT+TGG | 0.627229 | 1_3:-28643574 | Msa0112950:CDS |
| TTGTGGAGTTGAAAATGGGG+AGG | 0.632079 | 1_3:-28642731 | Msa0112950:CDS |
| TGGTAATGAAAGGAGTGTGG+AGG | 0.642373 | 1_3:-28643554 | Msa0112950:CDS |
| AAATGCCAAAGAAAGCTCAA+AGG | 0.663329 | 1_3:-28644224 | Msa0112950:CDS |
| ATATTGTGGAGTTGAAAATG+GGG | 0.692849 | 1_3:-28642734 | Msa0112950:CDS |
| ATTCATGAAAGAATGCAATG+TGG | 0.698838 | 1_3:-28642637 | Msa0112950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAATATGCTATTTTTT+TGG | - | chr1_3:28643220-28643239 | Msa0112950:intron | 10.0% |
| !!! | ATGAATAATTTATAAGTTTT+TGG | - | chr1_3:28644040-28644059 | Msa0112950:intron | 10.0% |
| !! | CATATAATATATAGTTAATT+AGG | + | chr1_3:28644134-28644153 | None:intergenic | 10.0% |
| !!! | ATAAAAATATGCTATTTTTT+TGG | - | chr1_3:28643220-28643239 | Msa0112950:intron | 10.0% |
| !!! | ATGAATAATTTATAAGTTTT+TGG | - | chr1_3:28644040-28644059 | Msa0112950:intron | 10.0% |
| !! | CATATAATATATAGTTAATT+AGG | + | chr1_3:28644134-28644153 | None:intergenic | 10.0% |
| !! | AATATTATTCTATGAAAATC+TGG | + | chr1_3:28642478-28642497 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | - | chr1_3:28642812-28642831 | Msa0112950:intron | 15.0% |
| !!! | ATAGTTTATTTCTAAAGTAT+TGG | + | chr1_3:28642840-28642859 | None:intergenic | 15.0% |
| !! | ATTATATCTTTAAACTTTAC+AGG | - | chr1_3:28643362-28643381 | Msa0112950:intron | 15.0% |
| !!! | AGTTTTTAATAGTTAGTAAT+TGG | - | chr1_3:28644067-28644086 | Msa0112950:intron | 15.0% |
| !!! | TCAAATATCTCTAAATTTTT+TGG | - | chr1_3:28644194-28644213 | Msa0112950:intron | 15.0% |
| !!! | CAAATATCTCTAAATTTTTT+GGG | - | chr1_3:28644195-28644214 | Msa0112950:intron | 15.0% |
| !!! | TTTTATTTAATTAATCCTAC+CGG | + | chr1_3:28644328-28644347 | None:intergenic | 15.0% |
| !! | AATATTATTCTATGAAAATC+TGG | + | chr1_3:28642478-28642497 | None:intergenic | 15.0% |
| !!! | TATTTTAAGGTTAAGATATT+TGG | - | chr1_3:28642812-28642831 | Msa0112950:intron | 15.0% |
| !!! | ATAGTTTATTTCTAAAGTAT+TGG | + | chr1_3:28642840-28642859 | None:intergenic | 15.0% |
| !! | ATTATATCTTTAAACTTTAC+AGG | - | chr1_3:28643362-28643381 | Msa0112950:intron | 15.0% |
| !!! | AGTTTTTAATAGTTAGTAAT+TGG | - | chr1_3:28644067-28644086 | Msa0112950:intron | 15.0% |
| !!! | TCAAATATCTCTAAATTTTT+TGG | - | chr1_3:28644194-28644213 | Msa0112950:intron | 15.0% |
| !!! | CAAATATCTCTAAATTTTTT+GGG | - | chr1_3:28644195-28644214 | Msa0112950:intron | 15.0% |
| !!! | TTTTATTTAATTAATCCTAC+CGG | + | chr1_3:28644328-28644347 | None:intergenic | 15.0% |
| !! | GAAATCATACATTAACAATA+TGG | + | chr1_3:28642578-28642597 | None:intergenic | 20.0% |
| !! | ATTTGGAAATTTAAGGAATA+GGG | + | chr1_3:28642666-28642685 | None:intergenic | 20.0% |
| !!! | TGTTCAACAAGAAATATTTT+GGG | - | chr1_3:28642688-28642707 | Msa0112950:CDS | 20.0% |
| !!! | AAATATGCTATTTTTTTGGA+AGG | - | chr1_3:28643224-28643243 | Msa0112950:intron | 20.0% |
| !!! | GAAAACTTGAAAGATTTTAA+TGG | - | chr1_3:28643601-28643620 | Msa0112950:CDS | 20.0% |
| !! | TTTATTTAATTAATCCTACC+GGG | + | chr1_3:28644327-28644346 | None:intergenic | 20.0% |
| !! | GAAATCATACATTAACAATA+TGG | + | chr1_3:28642578-28642597 | None:intergenic | 20.0% |
| !! | ATTTGGAAATTTAAGGAATA+GGG | + | chr1_3:28642666-28642685 | None:intergenic | 20.0% |
| !!! | TGTTCAACAAGAAATATTTT+GGG | - | chr1_3:28642688-28642707 | Msa0112950:CDS | 20.0% |
| !!! | AAATATGCTATTTTTTTGGA+AGG | - | chr1_3:28643224-28643243 | Msa0112950:intron | 20.0% |
| !!! | GAAAACTTGAAAGATTTTAA+TGG | - | chr1_3:28643601-28643620 | Msa0112950:CDS | 20.0% |
| !! | TTTATTTAATTAATCCTACC+GGG | + | chr1_3:28644327-28644346 | None:intergenic | 20.0% |
| ! | TATTTCTCCACATATTTCTT+TGG | + | chr1_3:28642625-28642644 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1_3:28642626-28642645 | Msa0112950:CDS | 25.0% |
| ! | CATTTGGAAATTTAAGGAAT+AGG | + | chr1_3:28642667-28642686 | None:intergenic | 25.0% |
| ! | CTATTCCTTAAATTTCCAAA+TGG | - | chr1_3:28642665-28642684 | Msa0112950:CDS | 25.0% |
| !! | GTGTTCAACAAGAAATATTT+TGG | - | chr1_3:28642687-28642706 | Msa0112950:CDS | 25.0% |
| ! | TTTGCAAAGTCTTTCAAATA+TGG | - | chr1_3:28642755-28642774 | Msa0112950:CDS | 25.0% |
| ! | CTCTTAACTTTCAAATTCAT+TGG | - | chr1_3:28642782-28642801 | Msa0112950:intron | 25.0% |
| ! | TTAACTTTCAAATTCATTGG+TGG | - | chr1_3:28642785-28642804 | Msa0112950:intron | 25.0% |
| !!! | TTCTTCAACTGATTTGATAT+TGG | + | chr1_3:28642864-28642883 | None:intergenic | 25.0% |
| ! | AATATCAAATCAGTTGAAGA+AGG | - | chr1_3:28642863-28642882 | Msa0112950:intron | 25.0% |
| ! | GAAAAAATCACAACAAACTA+TGG | + | chr1_3:28643120-28643139 | None:intergenic | 25.0% |
| ! | GTCATTATAACTTCAAAAGA+GGG | + | chr1_3:28643455-28643474 | None:intergenic | 25.0% |
| ! | TGTCATTATAACTTCAAAAG+AGG | + | chr1_3:28643456-28643475 | None:intergenic | 25.0% |
| ! | TTAATGGAACTGTAACAATA+AGG | - | chr1_3:28643617-28643636 | Msa0112950:CDS | 25.0% |
| ! | TAATGGAACTGTAACAATAA+GGG | - | chr1_3:28643618-28643637 | Msa0112950:CDS | 25.0% |
| ! | TTACAAAGAAAGATCTTGTT+TGG | - | chr1_3:28643684-28643703 | Msa0112950:intron | 25.0% |
| !! | TACAAAGAAAGATCTTGTTT+GGG | - | chr1_3:28643685-28643704 | Msa0112950:intron | 25.0% |
| ! | TAAAACCTTGTAGTTTCTTT+GGG | + | chr1_3:28643837-28643856 | None:intergenic | 25.0% |
| ! | TTAAAACCTTGTAGTTTCTT+TGG | + | chr1_3:28643838-28643857 | None:intergenic | 25.0% |
| ! | TTATTTAATTAATCCTACCG+GGG | + | chr1_3:28644326-28644345 | None:intergenic | 25.0% |
| ! | AAATATTGTGGAGTTGAAAA+TGG | - | chr1_3:28644460-28644479 | Msa0112950:intron | 25.0% |
| ! | AATATTGTGGAGTTGAAAAT+GGG | - | chr1_3:28644461-28644480 | Msa0112950:intron | 25.0% |
| !! | AATTATTATCAGAGTATTCG+TGG | - | chr1_3:28644509-28644528 | Msa0112950:intron | 25.0% |
| ! | TATTTCTCCACATATTTCTT+TGG | + | chr1_3:28642625-28642644 | None:intergenic | 25.0% |
| ! | AGAAATATGTGGAGAAATAT+TGG | - | chr1_3:28642626-28642645 | Msa0112950:CDS | 25.0% |
| ! | CATTTGGAAATTTAAGGAAT+AGG | + | chr1_3:28642667-28642686 | None:intergenic | 25.0% |
| ! | CTATTCCTTAAATTTCCAAA+TGG | - | chr1_3:28642665-28642684 | Msa0112950:CDS | 25.0% |
| !! | GTGTTCAACAAGAAATATTT+TGG | - | chr1_3:28642687-28642706 | Msa0112950:CDS | 25.0% |
| ! | TTTGCAAAGTCTTTCAAATA+TGG | - | chr1_3:28642755-28642774 | Msa0112950:CDS | 25.0% |
| ! | CTCTTAACTTTCAAATTCAT+TGG | - | chr1_3:28642782-28642801 | Msa0112950:intron | 25.0% |
| ! | TTAACTTTCAAATTCATTGG+TGG | - | chr1_3:28642785-28642804 | Msa0112950:intron | 25.0% |
| !!! | TTCTTCAACTGATTTGATAT+TGG | + | chr1_3:28642864-28642883 | None:intergenic | 25.0% |
| ! | AATATCAAATCAGTTGAAGA+AGG | - | chr1_3:28642863-28642882 | Msa0112950:intron | 25.0% |
| ! | GAAAAAATCACAACAAACTA+TGG | + | chr1_3:28643120-28643139 | None:intergenic | 25.0% |
| ! | GTCATTATAACTTCAAAAGA+GGG | + | chr1_3:28643455-28643474 | None:intergenic | 25.0% |
| ! | TGTCATTATAACTTCAAAAG+AGG | + | chr1_3:28643456-28643475 | None:intergenic | 25.0% |
| ! | TTAATGGAACTGTAACAATA+AGG | - | chr1_3:28643617-28643636 | Msa0112950:CDS | 25.0% |
| ! | TAATGGAACTGTAACAATAA+GGG | - | chr1_3:28643618-28643637 | Msa0112950:CDS | 25.0% |
| ! | TTACAAAGAAAGATCTTGTT+TGG | - | chr1_3:28643684-28643703 | Msa0112950:intron | 25.0% |
| !! | TACAAAGAAAGATCTTGTTT+GGG | - | chr1_3:28643685-28643704 | Msa0112950:intron | 25.0% |
| ! | TAAAACCTTGTAGTTTCTTT+GGG | + | chr1_3:28643837-28643856 | None:intergenic | 25.0% |
| ! | TTAAAACCTTGTAGTTTCTT+TGG | + | chr1_3:28643838-28643857 | None:intergenic | 25.0% |
| ! | TTATTTAATTAATCCTACCG+GGG | + | chr1_3:28644326-28644345 | None:intergenic | 25.0% |
| ! | AAATATTGTGGAGTTGAAAA+TGG | - | chr1_3:28644460-28644479 | Msa0112950:intron | 25.0% |
| ! | AATATTGTGGAGTTGAAAAT+GGG | - | chr1_3:28644461-28644480 | Msa0112950:intron | 25.0% |
| !! | AATTATTATCAGAGTATTCG+TGG | - | chr1_3:28644509-28644528 | Msa0112950:intron | 25.0% |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_3:28642631-28642650 | Msa0112950:CDS | 30.0% | |
| GAACACCATTTGGAAATTTA+AGG | + | chr1_3:28642673-28642692 | None:intergenic | 30.0% | |
| ATTTCTTGTTGAACACCATT+TGG | + | chr1_3:28642683-28642702 | None:intergenic | 30.0% | |
| !! | TCAACAAGAAATATTTTGGG+TGG | - | chr1_3:28642691-28642710 | Msa0112950:CDS | 30.0% |
| !! | CATTGGTGGATCATATTTTA+AGG | - | chr1_3:28642799-28642818 | Msa0112950:intron | 30.0% |
| AAAGCTCAAAGGACAATAAA+TGG | - | chr1_3:28642983-28643002 | Msa0112950:intron | 30.0% | |
| GAAAATTCTCAGGTAAGTTT+AGG | - | chr1_3:28643011-28643030 | Msa0112950:intron | 30.0% | |
| TCTGAAAGCTTGTAAATCTA+AGG | - | chr1_3:28643140-28643159 | Msa0112950:intron | 30.0% | |
| ! | AGTGTCTTGAAAATCGTTTT+TGG | - | chr1_3:28643174-28643193 | Msa0112950:intron | 30.0% |
| ACTTACAAAGAAATAGCCAT+TGG | + | chr1_3:28643489-28643508 | None:intergenic | 30.0% | |
| ! | TAAACCATGATTTGAAACAG+TGG | - | chr1_3:28643557-28643576 | Msa0112950:CDS | 30.0% |
| ! | TTTTCTCTTGAAAACTCACT+TGG | + | chr1_3:28643586-28643605 | None:intergenic | 30.0% |
| ATAGTGACAGTGAATGAAAA+AGG | + | chr1_3:28643790-28643809 | None:intergenic | 30.0% | |
| AACTGAATCCTACATAAGTT+AGG | + | chr1_3:28644093-28644112 | None:intergenic | 30.0% | |
| ! | CCTCTTTTCATAAATTCCTT+TGG | + | chr1_3:28644431-28644450 | None:intergenic | 30.0% |
| CCAAAGGAATTTATGAAAAG+AGG | - | chr1_3:28644428-28644447 | Msa0112950:intron | 30.0% | |
| TTTATGAAAAGAGGATGTCA+TGG | - | chr1_3:28644437-28644456 | Msa0112950:intron | 30.0% | |
| ATATTGTGGAGTTGAAAATG+GGG | - | chr1_3:28644462-28644481 | Msa0112950:intron | 30.0% | |
| !! | TAATTCACTTTTACGAACCA+TGG | + | chr1_3:28644494-28644513 | None:intergenic | 30.0% |
| ATTCATGAAAGAATGCAATG+TGG | - | chr1_3:28644559-28644578 | Msa0112950:intron | 30.0% | |
| CCTTAAAAACAGACAACTAA+TGG | + | chr1_3:28644661-28644680 | None:intergenic | 30.0% | |
| !!! | CCATTAGTTGTCTGTTTTTA+AGG | - | chr1_3:28644658-28644677 | Msa0112950:intron | 30.0% |
| TAAATATCCAGCACTTGAAA+GGG | + | chr1_3:28644710-28644729 | None:intergenic | 30.0% | |
| ATAAATATCCAGCACTTGAA+AGG | + | chr1_3:28644711-28644730 | None:intergenic | 30.0% | |
| TATGTGGAGAAATATTGGAA+AGG | - | chr1_3:28642631-28642650 | Msa0112950:CDS | 30.0% | |
| GAACACCATTTGGAAATTTA+AGG | + | chr1_3:28642673-28642692 | None:intergenic | 30.0% | |
| ATTTCTTGTTGAACACCATT+TGG | + | chr1_3:28642683-28642702 | None:intergenic | 30.0% | |
| !! | TCAACAAGAAATATTTTGGG+TGG | - | chr1_3:28642691-28642710 | Msa0112950:CDS | 30.0% |
| !! | CATTGGTGGATCATATTTTA+AGG | - | chr1_3:28642799-28642818 | Msa0112950:intron | 30.0% |
| AAAGCTCAAAGGACAATAAA+TGG | - | chr1_3:28642983-28643002 | Msa0112950:intron | 30.0% | |
| GAAAATTCTCAGGTAAGTTT+AGG | - | chr1_3:28643011-28643030 | Msa0112950:intron | 30.0% | |
| TCTGAAAGCTTGTAAATCTA+AGG | - | chr1_3:28643140-28643159 | Msa0112950:intron | 30.0% | |
| ! | AGTGTCTTGAAAATCGTTTT+TGG | - | chr1_3:28643174-28643193 | Msa0112950:intron | 30.0% |
| ACTTACAAAGAAATAGCCAT+TGG | + | chr1_3:28643489-28643508 | None:intergenic | 30.0% | |
| ! | TAAACCATGATTTGAAACAG+TGG | - | chr1_3:28643557-28643576 | Msa0112950:CDS | 30.0% |
| ! | TTTTCTCTTGAAAACTCACT+TGG | + | chr1_3:28643586-28643605 | None:intergenic | 30.0% |
| ATAGTGACAGTGAATGAAAA+AGG | + | chr1_3:28643790-28643809 | None:intergenic | 30.0% | |
| AACTGAATCCTACATAAGTT+AGG | + | chr1_3:28644093-28644112 | None:intergenic | 30.0% | |
| ! | CCTCTTTTCATAAATTCCTT+TGG | + | chr1_3:28644431-28644450 | None:intergenic | 30.0% |
| CCAAAGGAATTTATGAAAAG+AGG | - | chr1_3:28644428-28644447 | Msa0112950:intron | 30.0% | |
| TTTATGAAAAGAGGATGTCA+TGG | - | chr1_3:28644437-28644456 | Msa0112950:intron | 30.0% | |
| ATATTGTGGAGTTGAAAATG+GGG | - | chr1_3:28644462-28644481 | Msa0112950:intron | 30.0% | |
| !! | TAATTCACTTTTACGAACCA+TGG | + | chr1_3:28644494-28644513 | None:intergenic | 30.0% |
| ATTCATGAAAGAATGCAATG+TGG | - | chr1_3:28644559-28644578 | Msa0112950:intron | 30.0% | |
| CCTTAAAAACAGACAACTAA+TGG | + | chr1_3:28644661-28644680 | None:intergenic | 30.0% | |
| !!! | CCATTAGTTGTCTGTTTTTA+AGG | - | chr1_3:28644658-28644677 | Msa0112950:intron | 30.0% |
| TAAATATCCAGCACTTGAAA+GGG | + | chr1_3:28644710-28644729 | None:intergenic | 30.0% | |
| ATAAATATCCAGCACTTGAA+AGG | + | chr1_3:28644711-28644730 | None:intergenic | 30.0% | |
| TCTGAATTTCTTTGTTGCAG+AGG | - | chr1_3:28642596-28642615 | Msa0112950:CDS | 35.0% | |
| CTGAATTTCTTTGTTGCAGA+GGG | - | chr1_3:28642597-28642616 | Msa0112950:CDS | 35.0% | |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1_3:28642701-28642720 | Msa0112950:CDS | 35.0% |
| ACTTTCTTTACCTTCTTCAG+TGG | + | chr1_3:28642897-28642916 | None:intergenic | 35.0% | |
| AGAAGGTAAAGAAAGTGATG+AGG | - | chr1_3:28642901-28642920 | Msa0112950:CDS | 35.0% | |
| AAGTGATGAAGAGAGTGATA+AGG | - | chr1_3:28642946-28642965 | Msa0112950:intron | 35.0% | |
| AAATGCCAAAGAAAGCTCAA+AGG | - | chr1_3:28642972-28642991 | Msa0112950:intron | 35.0% | |
| ATTGTCCTTTGAGCTTTCTT+TGG | + | chr1_3:28642980-28642999 | None:intergenic | 35.0% | |
| AATGGCAAGAGAAAATTCTC+AGG | - | chr1_3:28643001-28643020 | Msa0112950:intron | 35.0% | |
| CTTTACAGGTTGTAACAAAG+TGG | - | chr1_3:28643376-28643395 | Msa0112950:CDS | 35.0% | |
| CATTAACAGCTTCAGATGTT+TGG | + | chr1_3:28643427-28643446 | None:intergenic | 35.0% | |
| ATGACACAATCTTACACCAA+TGG | - | chr1_3:28643470-28643489 | Msa0112950:CDS | 35.0% | |
| GTAACCACTGTTTCAAATCA+TGG | + | chr1_3:28643564-28643583 | None:intergenic | 35.0% | |
| !! | CAATAAGGGTTGGTAATGAA+AGG | - | chr1_3:28643632-28643651 | Msa0112950:intron | 35.0% |
| !! | GAGGTTAGTTTGAGGTATTA+TGG | - | chr1_3:28643661-28643680 | Msa0112950:intron | 35.0% |
| ! | AAAGAAAGATCTTGTTTGGG+TGG | - | chr1_3:28643688-28643707 | Msa0112950:intron | 35.0% |
| TGGTGGTTGGAAAATATTCA+GGG | - | chr1_3:28643708-28643727 | Msa0112950:intron | 35.0% | |
| ! | GTAATTGGCCTAACTTATGT+AGG | - | chr1_3:28644082-28644101 | Msa0112950:intron | 35.0% |
| GATGAAGCATAACACATTCA+AGG | - | chr1_3:28644282-28644301 | Msa0112950:CDS | 35.0% | |
| ! | GCATAACACATTCAAGGTTT+TGG | - | chr1_3:28644288-28644307 | Msa0112950:CDS | 35.0% |
| AGGATGTCATGGAAATATTG+TGG | - | chr1_3:28644448-28644467 | Msa0112950:intron | 35.0% | |
| AAAGAATGCAATGTGGAGAT+TGG | - | chr1_3:28644566-28644585 | Msa0112950:intron | 35.0% | |
| TCTGAATTTCTTTGTTGCAG+AGG | - | chr1_3:28642596-28642615 | Msa0112950:CDS | 35.0% | |
| CTGAATTTCTTTGTTGCAGA+GGG | - | chr1_3:28642597-28642616 | Msa0112950:CDS | 35.0% | |
| !! | ATATTTTGGGTGGAGAGTAA+TGG | - | chr1_3:28642701-28642720 | Msa0112950:CDS | 35.0% |
| ACTTTCTTTACCTTCTTCAG+TGG | + | chr1_3:28642897-28642916 | None:intergenic | 35.0% | |
| AGAAGGTAAAGAAAGTGATG+AGG | - | chr1_3:28642901-28642920 | Msa0112950:CDS | 35.0% | |
| AAGTGATGAAGAGAGTGATA+AGG | - | chr1_3:28642946-28642965 | Msa0112950:intron | 35.0% | |
| AAATGCCAAAGAAAGCTCAA+AGG | - | chr1_3:28642972-28642991 | Msa0112950:intron | 35.0% | |
| ATTGTCCTTTGAGCTTTCTT+TGG | + | chr1_3:28642980-28642999 | None:intergenic | 35.0% | |
| AATGGCAAGAGAAAATTCTC+AGG | - | chr1_3:28643001-28643020 | Msa0112950:intron | 35.0% | |
| CTTTACAGGTTGTAACAAAG+TGG | - | chr1_3:28643376-28643395 | Msa0112950:CDS | 35.0% | |
| CATTAACAGCTTCAGATGTT+TGG | + | chr1_3:28643427-28643446 | None:intergenic | 35.0% | |
| ATGACACAATCTTACACCAA+TGG | - | chr1_3:28643470-28643489 | Msa0112950:CDS | 35.0% | |
| GTAACCACTGTTTCAAATCA+TGG | + | chr1_3:28643564-28643583 | None:intergenic | 35.0% | |
| !! | CAATAAGGGTTGGTAATGAA+AGG | - | chr1_3:28643632-28643651 | Msa0112950:intron | 35.0% |
| !! | GAGGTTAGTTTGAGGTATTA+TGG | - | chr1_3:28643661-28643680 | Msa0112950:intron | 35.0% |
| ! | AAAGAAAGATCTTGTTTGGG+TGG | - | chr1_3:28643688-28643707 | Msa0112950:intron | 35.0% |
| TGGTGGTTGGAAAATATTCA+GGG | - | chr1_3:28643708-28643727 | Msa0112950:intron | 35.0% | |
| ! | GTAATTGGCCTAACTTATGT+AGG | - | chr1_3:28644082-28644101 | Msa0112950:intron | 35.0% |
| GATGAAGCATAACACATTCA+AGG | - | chr1_3:28644282-28644301 | Msa0112950:CDS | 35.0% | |
| ! | GCATAACACATTCAAGGTTT+TGG | - | chr1_3:28644288-28644307 | Msa0112950:CDS | 35.0% |
| AGGATGTCATGGAAATATTG+TGG | - | chr1_3:28644448-28644467 | Msa0112950:intron | 35.0% | |
| AAAGAATGCAATGTGGAGAT+TGG | - | chr1_3:28644566-28644585 | Msa0112950:intron | 35.0% | |
| GAGGGTTCCAAAGAAATATG+TGG | - | chr1_3:28642615-28642634 | Msa0112950:CDS | 40.0% | |
| TGGAGAGTAATGGTGACATT+TGG | - | chr1_3:28642711-28642730 | Msa0112950:CDS | 40.0% | |
| ACTTTCTTCACCTTCTTCAG+TGG | + | chr1_3:28642930-28642949 | None:intergenic | 40.0% | |
| !! | TTTTCTAGCCTTCTTCACCA+TGG | + | chr1_3:28643402-28643421 | None:intergenic | 40.0% |
| GGAACTGTAACAATAAGGGT+TGG | - | chr1_3:28643622-28643641 | Msa0112950:CDS | 40.0% | |
| GTGGTGGTTGGAAAATATTC+AGG | - | chr1_3:28643707-28643726 | Msa0112950:intron | 40.0% | |
| GCAATCCCAAAGAAACTACA+AGG | - | chr1_3:28643829-28643848 | Msa0112950:intron | 40.0% | |
| TTATGCTTGTACCGTACAGA+AGG | - | chr1_3:28644250-28644269 | Msa0112950:CDS | 40.0% | |
| GTATTTGCAGAGTGTACCAA+AGG | - | chr1_3:28644412-28644431 | Msa0112950:intron | 40.0% | |
| GAGGGTTCCAAAGAAATATG+TGG | - | chr1_3:28642615-28642634 | Msa0112950:CDS | 40.0% | |
| TGGAGAGTAATGGTGACATT+TGG | - | chr1_3:28642711-28642730 | Msa0112950:CDS | 40.0% | |
| ACTTTCTTCACCTTCTTCAG+TGG | + | chr1_3:28642930-28642949 | None:intergenic | 40.0% | |
| !! | TTTTCTAGCCTTCTTCACCA+TGG | + | chr1_3:28643402-28643421 | None:intergenic | 40.0% |
| GGAACTGTAACAATAAGGGT+TGG | - | chr1_3:28643622-28643641 | Msa0112950:CDS | 40.0% | |
| GTGGTGGTTGGAAAATATTC+AGG | - | chr1_3:28643707-28643726 | Msa0112950:intron | 40.0% | |
| GCAATCCCAAAGAAACTACA+AGG | - | chr1_3:28643829-28643848 | Msa0112950:intron | 40.0% | |
| TTATGCTTGTACCGTACAGA+AGG | - | chr1_3:28644250-28644269 | Msa0112950:CDS | 40.0% | |
| GTATTTGCAGAGTGTACCAA+AGG | - | chr1_3:28644412-28644431 | Msa0112950:intron | 40.0% | |
| AGGTTGTAACAAAGTGGCCA+TGG | - | chr1_3:28643382-28643401 | Msa0112950:CDS | 45.0% | |
| !! | GGTTGGTAATGAAAGGAGTG+TGG | - | chr1_3:28643639-28643658 | Msa0112950:intron | 45.0% |
| ! | TGGTAATGAAAGGAGTGTGG+AGG | - | chr1_3:28643642-28643661 | Msa0112950:intron | 45.0% |
| ! | GAAAGATCTTGTTTGGGTGG+TGG | - | chr1_3:28643691-28643710 | Msa0112950:intron | 45.0% |
| ACTGTCACTATTACTCGTGC+CGG | - | chr1_3:28643799-28643818 | Msa0112950:CDS | 45.0% | |
| !! | CTTTGGGATTGCTTCGTTTC+CGG | + | chr1_3:28643821-28643840 | None:intergenic | 45.0% |
| TACCGTACAGAAGGTCATGA+TGG | - | chr1_3:28644259-28644278 | Msa0112950:CDS | 45.0% | |
| ACCGTACAGAAGGTCATGAT+GGG | - | chr1_3:28644260-28644279 | Msa0112950:CDS | 45.0% | |
| TCCCATCATGACCTTCTGTA+CGG | + | chr1_3:28644264-28644283 | None:intergenic | 45.0% | |
| TTGTGGAGTTGAAAATGGGG+AGG | - | chr1_3:28644465-28644484 | Msa0112950:intron | 45.0% | |
| AGTATTCGTGGCTGCAAGTT+CGG | - | chr1_3:28644521-28644540 | Msa0112950:intron | 45.0% | |
| AGGTTGTAACAAAGTGGCCA+TGG | - | chr1_3:28643382-28643401 | Msa0112950:CDS | 45.0% | |
| !! | GGTTGGTAATGAAAGGAGTG+TGG | - | chr1_3:28643639-28643658 | Msa0112950:intron | 45.0% |
| ! | TGGTAATGAAAGGAGTGTGG+AGG | - | chr1_3:28643642-28643661 | Msa0112950:intron | 45.0% |
| ! | GAAAGATCTTGTTTGGGTGG+TGG | - | chr1_3:28643691-28643710 | Msa0112950:intron | 45.0% |
| ACTGTCACTATTACTCGTGC+CGG | - | chr1_3:28643799-28643818 | Msa0112950:CDS | 45.0% | |
| !! | CTTTGGGATTGCTTCGTTTC+CGG | + | chr1_3:28643821-28643840 | None:intergenic | 45.0% |
| TACCGTACAGAAGGTCATGA+TGG | - | chr1_3:28644259-28644278 | Msa0112950:CDS | 45.0% | |
| ACCGTACAGAAGGTCATGAT+GGG | - | chr1_3:28644260-28644279 | Msa0112950:CDS | 45.0% | |
| TCCCATCATGACCTTCTGTA+CGG | + | chr1_3:28644264-28644283 | None:intergenic | 45.0% | |
| TTGTGGAGTTGAAAATGGGG+AGG | - | chr1_3:28644465-28644484 | Msa0112950:intron | 45.0% | |
| AGTATTCGTGGCTGCAAGTT+CGG | - | chr1_3:28644521-28644540 | Msa0112950:intron | 45.0% | |
| !! | ATTTATGATAAAAAAAAATT+TGG | - | chr1_3:28643267-28643286 | Msa0112950:intron | 5.0% |
| !!! | AATTAAAAAAGTTTTTAATT+TGG | - | chr1_3:28644006-28644025 | Msa0112950:intron | 5.0% |
| !! | ATTTATGATAAAAAAAAATT+TGG | - | chr1_3:28643267-28643286 | Msa0112950:intron | 5.0% |
| !!! | AATTAAAAAAGTTTTTAATT+TGG | - | chr1_3:28644006-28644025 | Msa0112950:intron | 5.0% |
| GATGAGGAAGCCACTGAAGA+AGG | - | chr1_3:28642917-28642936 | Msa0112950:CDS | 50.0% | |
| CAAAGTGGCCATGGTGAAGA+AGG | - | chr1_3:28643391-28643410 | Msa0112950:CDS | 50.0% | |
| !! | GGAGTGTGGAGGTTAGTTTG+AGG | - | chr1_3:28643653-28643672 | Msa0112950:intron | 50.0% |
| ! | GATCTTGTTTGGGTGGTGGT+TGG | - | chr1_3:28643695-28643714 | Msa0112950:intron | 50.0% |
| TTTGGTGAAGAACACAGCCC+CGG | - | chr1_3:28644306-28644325 | Msa0112950:CDS | 50.0% | |
| TGAAAATGGGGAGGAAGCCA+TGG | - | chr1_3:28644474-28644493 | Msa0112950:intron | 50.0% | |
| GCTGCAAGTTCGGTAAAGGT+TGG | - | chr1_3:28644531-28644550 | Msa0112950:intron | 50.0% | |
| ! | TGCTTTGCCCTTTCAAGTGC+TGG | - | chr1_3:28644700-28644719 | Msa0112950:intron | 50.0% |
| GATGAGGAAGCCACTGAAGA+AGG | - | chr1_3:28642917-28642936 | Msa0112950:CDS | 50.0% | |
| CAAAGTGGCCATGGTGAAGA+AGG | - | chr1_3:28643391-28643410 | Msa0112950:CDS | 50.0% | |
| !! | GGAGTGTGGAGGTTAGTTTG+AGG | - | chr1_3:28643653-28643672 | Msa0112950:intron | 50.0% |
| ! | GATCTTGTTTGGGTGGTGGT+TGG | - | chr1_3:28643695-28643714 | Msa0112950:intron | 50.0% |
| TTTGGTGAAGAACACAGCCC+CGG | - | chr1_3:28644306-28644325 | Msa0112950:CDS | 50.0% | |
| TGAAAATGGGGAGGAAGCCA+TGG | - | chr1_3:28644474-28644493 | Msa0112950:intron | 50.0% | |
| GCTGCAAGTTCGGTAAAGGT+TGG | - | chr1_3:28644531-28644550 | Msa0112950:intron | 50.0% | |
| ! | TGCTTTGCCCTTTCAAGTGC+TGG | - | chr1_3:28644700-28644719 | Msa0112950:intron | 50.0% |
| ! | GGTGCTGAAGCCACTGAAGA+AGG | - | chr1_3:28642884-28642903 | Msa0112950:intron | 55.0% |
| CGTGGCTGCAAGTTCGGTAA+AGG | - | chr1_3:28644527-28644546 | Msa0112950:intron | 55.0% | |
| ! | GGTGCTGAAGCCACTGAAGA+AGG | - | chr1_3:28642884-28642903 | Msa0112950:intron | 55.0% |
| CGTGGCTGCAAGTTCGGTAA+AGG | - | chr1_3:28644527-28644546 | Msa0112950:intron | 55.0% | |
| GTGAAGAACACAGCCCCGGT+AGG | - | chr1_3:28644310-28644329 | Msa0112950:CDS | 60.0% | |
| GTGAAGAACACAGCCCCGGT+AGG | - | chr1_3:28644310-28644329 | Msa0112950:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 28642457 | 28644761 | 28642457 | ID=Msa0112950;Name=Msa0112950 |
| chr1_3 | mRNA | 28642457 | 28644761 | 28642457 | ID=Msa0112950-mRNA-1;Parent=Msa0112950;Name=Msa0112950-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0.83|0.71|1|0.83|0.71|7|74|317 |
| chr1_3 | exon | 28642457 | 28642479 | 28642457 | ID=Msa0112950-mRNA-1:exon:9480;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28642503 | 28642796 | 28642503 | ID=Msa0112950-mRNA-1:exon:9479;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28642891 | 28642949 | 28642891 | ID=Msa0112950-mRNA-1:exon:9478;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28643368 | 28643641 | 28643368 | ID=Msa0112950-mRNA-1:exon:9477;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28643716 | 28643834 | 28643716 | ID=Msa0112950-mRNA-1:exon:9476;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28644196 | 28644397 | 28644196 | ID=Msa0112950-mRNA-1:exon:9475;Parent=Msa0112950-mRNA-1 |
| chr1_3 | exon | 28644705 | 28644761 | 28644705 | ID=Msa0112950-mRNA-1:exon:9474;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28644705 | 28644761 | 28644705 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28644196 | 28644397 | 28644196 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28643716 | 28643834 | 28643716 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28643368 | 28643641 | 28643368 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28642891 | 28642949 | 28642891 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | CDS | 28642554 | 28642796 | 28642554 | ID=Msa0112950-mRNA-1:cds;Parent=Msa0112950-mRNA-1 |
| chr1_3 | three_prime_UTR | 28642503 | 28642553 | 28642503 | ID=Msa0112950-mRNA-1:three_prime_utr;Parent=Msa0112950-mRNA-1 |
| chr1_3 | three_prime_UTR | 28642457 | 28642479 | 28642457 | ID=Msa0112950-mRNA-1:three_prime_utr;Parent=Msa0112950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
