AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0113090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113090 MtrunA17_Chr1g0171711 89.440 786 14 5 1 717 1 786 0.0 1425
Msa0113090 MtrunA17_Chr7g0237271 59.770 783 242 11 2 717 8 784 0.0 900
Msa0113090 MtrunA17_Chr7g0237241 58.440 782 245 10 2 717 8 775 0.0 871
Msa0113090 MtrunA17_Chr3g0138311 53.452 449 181 9 287 717 459 897 2.98e-150 459
Msa0113090 MtrunA17_Chr3g0138311 76.136 88 21 0 1 88 1 88 3.39e-39 155
Msa0113090 MtrunA17_Chr1g0148791 55.275 436 163 9 301 717 480 902 7.85e-148 453
Msa0113090 MtrunA17_Chr1g0148791 76.136 88 21 0 1 88 1 88 4.53e-39 155
Msa0113090 MtrunA17_Chr2g0282401 51.506 332 148 6 395 717 461 788 5.14e-111 354
Msa0113090 MtrunA17_Chr4g0062881 44.819 415 187 7 309 717 79 457 7.29e-104 325
Msa0113090 MtrunA17_Chr4g0047051 42.701 274 151 4 449 717 36 308 2.17e-67 224
Msa0113090 MtrunA17_Chr4g0047071 39.929 283 153 8 449 717 3 282 7.07e-57 195
Msa0113090 MtrunA17_Chr4g0047091 41.259 286 152 7 442 717 87 366 3.33e-56 196
Msa0113090 MtrunA17_Chr4g0047061 40.316 253 139 6 472 717 83 330 2.47e-51 181
Msa0113090 MtrunA17_Chr4g0047101 39.600 250 130 6 430 670 11 248 8.77e-45 161
Msa0113090 MtrunA17_Chr4g0062891 38.667 150 85 4 12 155 22 170 3.94e-27 109
Msa0113090 MtrunA17_Chr4g0047111 38.255 149 63 5 527 670 7 131 1.83e-26 105
Msa0113090 MtrunA17_Chr1g0172501 26.351 296 201 9 431 716 264 552 1.28e-23 105
Msa0113090 MtrunA17_Chr1g0172501 25.758 198 137 6 445 634 358 553 3.11e-11 66.6
Msa0113090 MtrunA17_Chr3g0093681 26.351 296 201 9 431 716 264 552 2.05e-23 105
Msa0113090 MtrunA17_Chr3g0093681 25.758 198 137 6 445 634 358 553 5.37e-11 65.9
Msa0113090 MtrunA17_Chr5g0405851 26.452 310 198 12 431 716 146 449 5.75e-22 99.8
Msa0113090 MtrunA17_Chr8g0352821 21.753 308 226 9 421 716 160 464 2.01e-19 93.2
Msa0113090 MtrunA17_Chr4g0067151 26.360 239 159 7 451 675 86 321 1.73e-18 87.4
Msa0113090 MtrunA17_Chr4g0067151 25.862 290 188 12 451 716 35 321 3.61e-15 77.4
Msa0113090 MtrunA17_Chr5g0401661 28.205 234 149 8 437 654 431 661 1.58e-17 87.0
Msa0113090 MtrunA17_Chr5g0401661 22.291 323 209 11 431 716 323 640 1.74e-14 77.4
Msa0113090 MtrunA17_Chr5g0401671 25.641 234 155 7 437 654 341 571 5.65e-17 85.1
Msa0113090 MtrunA17_Chr5g0401671 22.741 321 208 11 431 716 235 550 8.48e-14 74.7
Msa0113090 MtrunA17_Chr5g0401671 20.962 291 210 6 441 715 304 590 1.41e-11 67.8
Msa0113090 MtrunA17_Chr1g0163021 50.000 68 29 2 610 672 21 88 3.49e-16 75.1
Msa0113090 MtrunA17_Chr4g0053651 25.641 234 155 6 437 654 324 554 1.56e-14 77.0
Msa0113090 MtrunA17_Chr4g0053651 22.956 318 205 12 434 716 221 533 5.28e-14 75.5
Msa0113090 MtrunA17_Chr4g0053651 25.896 251 162 9 451 683 297 541 1.23e-12 71.2
Msa0113090 MtrunA17_Chr3g0136971 23.986 296 194 10 432 716 339 614 6.41e-14 75.5
Msa0113090 MtrunA17_Chr3g0136971 24.017 229 162 5 443 661 419 645 3.76e-11 66.6
Msa0113090 MtrunA17_Chr7g0253861 22.340 282 200 8 451 715 63 342 1.11e-13 73.2
Msa0113090 MtrunA17_Chr2g0281451 25.000 228 155 6 444 664 24 242 4.19e-13 73.2
Msa0113090 MtrunA17_Chr2g0281451 24.878 205 144 6 521 716 8 211 5.06e-13 72.8
Msa0113090 MtrunA17_Chr1g0185501 24.172 302 179 11 446 716 30 312 1.01e-12 69.7
Msa0113090 MtrunA17_Chr1g0185501 23.320 253 180 9 476 716 18 268 2.08e-11 65.9
Msa0113090 MtrunA17_Chr3g0099061 24.911 281 167 11 446 717 267 512 2.77e-12 69.7
Msa0113090 MtrunA17_Chr1g0168391 25.134 187 131 3 457 635 238 423 2.92e-12 69.7
Msa0113090 MtrunA17_Chr2g0283891 25.877 228 153 8 506 717 83 310 5.67e-12 67.4
Msa0113090 MtrunA17_Chr2g0331981 23.377 231 134 6 451 676 65 257 5.93e-12 69.3
Msa0113090 MtrunA17_Chr6g0448921 23.529 204 148 3 521 716 9 212 9.66e-12 68.6
Msa0113090 MtrunA17_Chr1g0197551 22.388 268 169 6 436 667 44 308 1.84e-11 67.8
Msa0113090 MtrunA17_Chr4g0059031 27.513 189 122 6 543 716 34 222 1.95e-11 67.8
Msa0113090 MtrunA17_Chr4g0059031 30.968 155 92 5 454 594 71 224 8.52e-11 65.5
Msa0113090 MtrunA17_Chr4g0035611 22.388 268 169 6 436 667 44 308 2.01e-11 67.8
Msa0113090 MtrunA17_Chr4g0004241 22.944 231 135 6 451 676 65 257 2.49e-11 67.4
Msa0113090 MtrunA17_Chr2g0295791 25.214 234 135 5 484 715 169 364 2.72e-11 66.6
Msa0113090 MtrunA17_Chr1g0200901 24.000 275 192 8 453 716 91 359 3.55e-11 65.9
Msa0113090 MtrunA17_Chr8g0383711 20.408 294 218 8 435 717 10 298 4.60e-11 64.7
Msa0113090 MtrunA17_Chr3g0095501 23.592 284 195 12 450 716 277 555 6.20e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0113090 AT2G32700.6 67.300 789 182 12 1 717 1 785 0.0 1019
Msa0113090 AT2G32700.2 67.130 791 182 13 1 717 1 787 0.0 1013
Msa0113090 AT2G32700.5 67.130 791 182 13 1 717 1 787 0.0 1013
Msa0113090 AT2G32700.1 67.130 791 182 13 1 717 1 787 0.0 1013
Msa0113090 AT2G32700.4 67.130 791 182 13 1 717 1 787 0.0 1013
Msa0113090 AT2G32700.3 67.130 791 182 13 1 717 1 787 0.0 1013
Msa0113090 AT2G32700.7 65.556 810 182 14 1 717 1 806 0.0 1002
Msa0113090 AT4G32551.1 57.562 443 167 7 287 717 498 931 1.72e-165 500
Msa0113090 AT4G32551.1 77.273 88 20 0 1 88 1 88 6.37e-40 158
Msa0113090 AT4G32551.2 57.562 443 167 7 287 717 536 969 3.39e-165 501
Msa0113090 AT4G32551.2 77.273 88 20 0 1 88 1 88 6.51e-40 158
Msa0113090 AT2G41500.1 27.857 280 185 11 449 716 261 535 8.94e-22 100
Msa0113090 AT2G41500.1 25.888 197 136 6 451 639 347 541 8.59e-11 65.5
Msa0113090 AT2G41500.2 27.857 280 185 11 449 716 261 535 8.94e-22 100
Msa0113090 AT2G41500.2 25.888 197 136 6 451 639 347 541 8.59e-11 65.5
Msa0113090 AT4G02730.1 25.333 300 207 10 433 717 33 330 4.17e-18 86.7
Msa0113090 AT3G49660.1 24.188 277 156 7 451 716 79 312 1.22e-17 85.1
Msa0113090 AT5G13480.1 23.026 304 217 10 424 716 107 404 7.54e-17 85.1
Msa0113090 AT5G13480.3 23.026 304 217 10 424 716 95 392 8.69e-17 85.1
Msa0113090 AT5G13480.4 23.026 304 217 10 424 716 95 392 8.93e-17 85.1
Msa0113090 AT5G13480.2 23.026 304 217 10 424 716 118 415 1.18e-16 84.7
Msa0113090 AT5G60940.2 22.917 336 227 12 412 717 1 334 4.71e-15 77.8
Msa0113090 AT1G11160.1 23.887 247 173 7 427 664 2 242 1.22e-14 78.6
Msa0113090 AT1G11160.1 25.854 205 142 6 521 716 8 211 3.65e-13 73.9
Msa0113090 AT1G11160.2 23.887 247 173 7 427 664 2 242 1.34e-14 78.6
Msa0113090 AT1G11160.2 25.854 205 142 6 521 716 8 211 4.01e-13 73.6
Msa0113090 AT1G11160.4 23.887 247 173 7 427 664 2 242 1.61e-14 78.2
Msa0113090 AT1G11160.4 25.854 205 142 6 521 716 8 211 4.56e-13 73.6
Msa0113090 AT1G61210.1 26.341 205 141 6 521 716 8 211 2.16e-14 77.8
Msa0113090 AT1G61210.3 26.341 205 141 6 521 716 8 211 2.58e-14 77.4
Msa0113090 AT1G61210.2 26.341 205 141 6 521 716 8 211 2.65e-14 77.4
Msa0113090 AT5G25150.1 22.034 295 166 7 448 716 357 613 5.99e-14 75.9
Msa0113090 AT5G25150.2 22.034 295 166 7 448 716 357 613 7.46e-14 75.5
Msa0113090 AT2G33340.3 27.315 216 143 6 433 635 209 423 8.37e-14 75.1
Msa0113090 AT2G33340.2 27.315 216 143 5 433 635 209 423 8.70e-14 75.1
Msa0113090 AT2G33340.1 27.315 216 143 5 433 635 209 423 8.70e-14 75.1
Msa0113090 AT5G67320.1 23.659 317 204 10 434 716 256 568 4.50e-13 73.2
Msa0113090 AT2G43770.1 20.906 287 208 8 446 715 56 340 6.73e-13 71.2
Msa0113090 AT5G08390.1 23.529 204 148 3 521 716 9 212 3.65e-12 70.5
Msa0113090 AT5G08390.1 22.768 224 132 6 456 677 30 214 1.08e-11 68.9
Msa0113090 AT5G08390.1 23.980 196 141 3 451 640 67 260 5.83e-11 66.6
Msa0113090 AT3G18130.1 23.529 204 143 5 451 644 71 271 6.63e-12 67.8
Msa0113090 AT3G18130.1 24.895 237 158 9 457 677 30 262 6.75e-12 67.8
Msa0113090 AT1G18080.1 25.571 219 143 8 457 658 30 245 1.05e-11 67.4
Msa0113090 AT1G18080.1 24.638 207 140 7 451 645 71 273 9.06e-11 64.3
Msa0113090 AT1G48630.1 23.039 204 144 5 451 644 71 271 1.53e-11 66.6
Msa0113090 AT1G48630.1 24.473 237 159 8 457 677 30 262 4.69e-11 65.5
Msa0113090 AT5G23430.1 23.902 205 146 5 521 716 9 212 2.03e-11 68.2
Msa0113090 AT5G23430.1 23.980 196 141 3 451 640 67 260 9.33e-11 65.9
Msa0113090 AT5G23430.3 23.902 205 146 5 521 716 9 212 2.08e-11 68.2
Msa0113090 AT5G23430.3 23.980 196 141 3 451 640 67 260 9.57e-11 65.9
Msa0113090 AT5G23430.2 23.902 205 146 5 521 716 9 212 2.08e-11 68.2
Msa0113090 AT5G23430.2 23.980 196 141 3 451 640 67 260 9.57e-11 65.9
Msa0113090 AT1G73720.1 23.311 296 186 8 429 717 249 510 3.93e-11 66.6
Msa0113090 AT2G21390.1 23.846 260 159 7 444 667 52 308 6.96e-11 66.6
Msa0113090 AT5G52820.1 20.323 310 174 5 446 716 112 387 7.94e-11 65.5

Find 200 sgRNAs with CRISPR-Local

Find 1245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGGATGGCTTGGAACATTT+TGG 0.166410 1_3:-28776013 Msa0113090:CDS
AAACTATGGCGCAGAGTAAT+TGG 0.185140 1_3:-28782815 Msa0113090:exon
CCTGTGGATCCTTCAATTTA+TGG 0.198445 1_3:-28781732 Msa0113090:CDS
GGATACAAATGGAGATTATT+TGG 0.212936 1_3:-28767835 Msa0113090:CDS
GGTGATGGAAAGGACTTATT+TGG 0.218195 1_3:-28775938 Msa0113090:CDS
TGTTTACATATATGATTATT+TGG 0.221087 1_3:-28782690 Msa0113090:CDS
ATAACAAAACTCACAGTTAA+AGG 0.223383 1_3:+28781356 None:intergenic
GCAGCCAAGCCTTTCTTTGC+AGG 0.229828 1_3:-28768343 Msa0113090:intron
CTTGTCATTAGGTTGTTCTT+TGG 0.260725 1_3:-28771211 Msa0113090:intron
TTGATACAACTGTGCGGCTT+TGG 0.280722 1_3:-28771085 Msa0113090:CDS
CACCTTCTGGCCGCAGCATC+TGG 0.284735 1_3:-28768059 Msa0113090:CDS
TATTATAGAATAACCGAAAA+AGG 0.301943 1_3:-28776809 Msa0113090:intron
CTGTGGATCCTTCAATTTAT+GGG 0.314347 1_3:-28781731 Msa0113090:CDS
TACTCCAACCTCTTGGTTAT+CGG 0.325693 1_3:-28767702 Msa0113090:CDS
CCCTTCTTTGCATCTGAGCT+TGG 0.331207 1_3:+28782271 None:intergenic
GTCATGTGAGGAGGAGAATT+CGG 0.332153 1_3:+28783114 None:intergenic
GCCAAGGAGTGGACACCTTC+TGG 0.333667 1_3:-28768072 Msa0113090:CDS
GTTGCCAGCTGAGTTGAATT+TGG 0.340739 1_3:+28771116 None:intergenic
CAGGCAAATGCACTCATTAC+AGG 0.344223 1_3:-28768003 Msa0113090:intron
AGGAAAGGGCCTACATCTTC+AGG 0.354520 1_3:-28776789 Msa0113090:CDS
AATGCAATCTACTTCATCTA+AGG 0.355132 1_3:-28781014 Msa0113090:intron
TCCTATATCAGGATTAAATC+AGG 0.359023 1_3:-28781408 Msa0113090:intron
CGCTATATGCCTGCAAAGAA+AGG 0.364543 1_3:+28768334 None:intergenic
GGGAGGTACATTGTGTATGC+TGG 0.368192 1_3:-28767857 Msa0113090:CDS
TGCTGTCATTTCTCTTCAGA+TGG 0.369775 1_3:-28775748 Msa0113090:CDS
GTACATGCACAAGGAAATAT+TGG 0.369935 1_3:-28781151 Msa0113090:CDS
GTTCCAATGGGAGGATGATT+AGG 0.373960 1_3:+28782246 None:intergenic
GCAATCTACTGCCACTGCTT+TGG 0.375891 1_3:-28782184 Msa0113090:CDS
TGATTCCACATTATCATCTA+AGG 0.380642 1_3:+28775979 None:intergenic
ATGACAAGTCAGTAAAGATA+TGG 0.386590 1_3:-28766378 Msa0113090:CDS
TAATGCTGCAGCATATTTAG+AGG 0.391284 1_3:-28782433 Msa0113090:intron
TGATACAACTGTGCGGCTTT+GGG 0.391565 1_3:-28771084 Msa0113090:CDS
TTGAACTGAGAACGAAACTA+TGG 0.393141 1_3:-28782829 Msa0113090:exon
GAATCTGTAGCATGCTCGGC+AGG 0.396589 1_3:+28775899 None:intergenic
ATAACAATGAGATTCGCTTC+TGG 0.401253 1_3:-28768242 Msa0113090:CDS
GATGATTTGTTGATTTCAAA+AGG 0.402681 1_3:+28782073 None:intergenic
CTGTCACAGGTGATTGTGCT+AGG 0.405342 1_3:+28766422 None:intergenic
GTCAAGAATCTGTCAAAGTT+TGG 0.406905 1_3:-28767803 Msa0113090:CDS
GGAGGATTGCAGTCAAAGTC+TGG 0.414299 1_3:-28781705 Msa0113090:CDS
TTCACAAGTGTATGGAGATA+TGG 0.414553 1_3:-28781125 Msa0113090:CDS
GGCAACTTGCAGAATGTTGC+TGG 0.416007 1_3:-28776666 Msa0113090:CDS
TCATGTGAGGAGGAGAATTC+GGG 0.428188 1_3:+28783115 None:intergenic
ATTTCCTGTACCAGTACTAT+TGG 0.429601 1_3:+28776761 None:intergenic
ACCAAGAGGTTGGAGTAACT+TGG 0.432164 1_3:+28767708 None:intergenic
AAAGTTTGGTCACTTGCCTC+TGG 0.432801 1_3:-28767789 Msa0113090:CDS
TCACCAGGAGTATGAATAGA+TGG 0.433009 1_3:+28776705 None:intergenic
ATTGATCCATCGTTTGCAAT+TGG 0.433581 1_3:+28781046 None:intergenic
ATTGCAAACGATGGATCAAT+AGG 0.436922 1_3:-28781043 Msa0113090:CDS
TTGATTTACCAGCTGGTTTG+TGG 0.439336 1_3:+28776587 None:intergenic
GTTGACGGTTGAGAATTAGA+AGG 0.441908 1_3:+28776729 None:intergenic
GCCAGAAGGTGTCCACTCCT+TGG 0.444368 1_3:+28768071 None:intergenic
AACTATGGCGCAGAGTAATT+GGG 0.449762 1_3:-28782814 Msa0113090:exon
CCTCCCTGCCCATAAATTGA+AGG 0.450930 1_3:+28781723 None:intergenic
TTGAAATCAACAAATCATCC+TGG 0.452186 1_3:-28782069 Msa0113090:CDS
GTGATGGAAAGGACTTATTT+GGG 0.454425 1_3:-28775937 Msa0113090:CDS
CATGCTACAGATTCTTCAAA+AGG 0.454429 1_3:-28775890 Msa0113090:intron
ATGTATTTCTAGGGACACTC+TGG 0.457420 1_3:-28767879 Msa0113090:intron
ATTGGCAATTCACAAGTGTA+TGG 0.462672 1_3:-28781133 Msa0113090:CDS
GATGATGTCTCTGTATCCAT+AGG 0.464780 1_3:+28782123 None:intergenic
ACAGAATACAATTCCCGATC+AGG 0.465983 1_3:+28783021 None:intergenic
CACTGCATTGGGATGGATCA+TGG 0.466854 1_3:+28782972 None:intergenic
GGATCCTTCAATTTATGGGC+AGG 0.467209 1_3:-28781727 Msa0113090:CDS
TCTGTAGTGATAGCATTTAG+AGG 0.468147 1_3:+28782219 None:intergenic
CTTCTTGTCATGTCCAGCAC+TGG 0.468790 1_3:+28775714 None:intergenic
TGATCGTGGCTGCATTAATC+CGG 0.473284 1_3:-28782999 Msa0113090:five_prime_UTR
ATGGATCAAAACACTGCATT+GGG 0.473585 1_3:+28782961 None:intergenic
CCAAACAGTCAGATGGTTCA+AGG 0.475389 1_3:-28781970 Msa0113090:intron
CCCAAGTTACTCCAACCTCT+TGG 0.475839 1_3:-28767709 Msa0113090:CDS
ATCAGCTTTGCAGCAAATGC+AGG 0.481732 1_3:-28781929 Msa0113090:CDS
ATGGATCCACAACGATTAAG+AGG 0.483944 1_3:-28781106 Msa0113090:CDS
ACTTATTTGGGACGTTGAAA+CGG 0.485085 1_3:-28775925 Msa0113090:CDS
TACACCCTCATGAGCTGGTA+TGG 0.493721 1_3:+28766453 None:intergenic
AATGCAGCAATTGATGCTCC+TGG 0.495097 1_3:-28782528 Msa0113090:intron
GCCAAGCTCAGATGCAAAGA+AGG 0.495289 1_3:-28782272 Msa0113090:CDS
ATAATAACAGTGTGTTCCTC+TGG 0.497063 1_3:+28771158 None:intergenic
CGAACCCTAATTCCCCGAAA+AGG 0.498452 1_3:-28783052 Msa0113090:five_prime_UTR
TTCTAGCATCTAAAAGTGGT+TGG 0.500545 1_3:+28782100 None:intergenic
CTTGGTTATCGGAGGATACC+AGG 0.501060 1_3:-28767691 Msa0113090:intron
TCTAGCATCTAAAAGTGGTT+GGG 0.502456 1_3:+28782101 None:intergenic
ACTCACTCACCTACTGGATC+AGG 0.502692 1_3:+28782611 None:intergenic
TCTTTGATGTTGAGACTGAC+AGG 0.507574 1_3:-28768022 Msa0113090:CDS
AGAATGTTTCTCGTTTGTCC+TGG 0.509306 1_3:+28782458 None:intergenic
TGAAGAATCTGTAGCATGCT+CGG 0.510849 1_3:+28775895 None:intergenic
GCTGTCATTTCTCTTCAGAT+GGG 0.513862 1_3:-28775747 Msa0113090:CDS
ACTTACAGTCTTTGGAGCTA+TGG 0.514145 1_3:-28766501 Msa0113090:intron
ACCATACATCATCATACCCT+TGG 0.514573 1_3:+28776638 None:intergenic
CAGACCAAATTCAACTCAGC+TGG 0.516977 1_3:-28771120 Msa0113090:CDS
GGATTAAATCAGGGAGTTGG+TGG 0.517163 1_3:-28781398 Msa0113090:CDS
GTCATTTATGACAGAAGGGA+AGG 0.518397 1_3:-28782639 Msa0113090:CDS
TCAGGAGCTGCCAATAGTAC+TGG 0.519807 1_3:-28776771 Msa0113090:CDS
CTAGCACAATCACCTGTGAC+AGG 0.523185 1_3:-28766421 Msa0113090:CDS
TTAGATGAAGTAGATTGCAT+TGG 0.524357 1_3:+28781016 None:intergenic
CTTTACTGACTTGTCATGAC+TGG 0.525505 1_3:+28766384 None:intergenic
GCTAAGTCATTTATGACAGA+AGG 0.525516 1_3:-28782644 Msa0113090:CDS
GATGGATCAAAACACTGCAT+TGG 0.525610 1_3:+28782960 None:intergenic
TGCCAGATGCTGCGGCCAGA+AGG 0.525651 1_3:+28768057 None:intergenic
AAGTCTGGAATCACAAATGC+AGG 0.526168 1_3:-28781690 Msa0113090:intron
TCCTGGTGATGGTGTTGCTA+TGG 0.529700 1_3:-28776691 Msa0113090:CDS
TGCATCTTCCACAAACCAGC+TGG 0.530085 1_3:-28776595 Msa0113090:intron
ATGATTTGTTGATTTCAAAA+GGG 0.530464 1_3:+28782074 None:intergenic
AATCTCATTGTTATCATCAC+AGG 0.531071 1_3:+28768251 None:intergenic
TGGTGATGGTGTTGCTATGG+CGG 0.533049 1_3:-28776688 Msa0113090:CDS
GGGAAATTATTAGCCAGTGC+TGG 0.533775 1_3:-28775727 Msa0113090:CDS
TGTGGAATCATTTCTCTCAC+AGG 0.538806 1_3:-28775966 Msa0113090:CDS
GTATGAATAGATGGAGTTGA+CGG 0.541616 1_3:+28776714 None:intergenic
TGTGTATGCTGGGATACAAA+TGG 0.541891 1_3:-28767846 Msa0113090:CDS
TCTATTCATACTCCTGGTGA+TGG 0.543226 1_3:-28776702 Msa0113090:CDS
GCTGCCAATAGTACTGGTAC+AGG 0.543266 1_3:-28776765 Msa0113090:CDS
TGGGATGGATCATGGATGGC+CGG 0.544106 1_3:+28782980 None:intergenic
TGAAATCAACAAATCATCCT+GGG 0.545342 1_3:-28782068 Msa0113090:intron
TTTAGAGGAGGAGTTCCAAT+GGG 0.550042 1_3:+28782234 None:intergenic
ATCACTACAGAAGGAATGCT+AGG 0.550461 1_3:-28782207 Msa0113090:CDS
GTGGTCTCACATTGAAAGGA+TGG 0.551071 1_3:-28781379 Msa0113090:CDS
TCATTTCTCTCACAGGATGA+TGG 0.553119 1_3:-28775959 Msa0113090:CDS
GATCCTAATCATCCTCCCAT+TGG 0.553131 1_3:-28782249 Msa0113090:CDS
TCCAAGGGTATGATGATGTA+TGG 0.555960 1_3:-28776639 Msa0113090:CDS
GAAGCAACCATCCCTGTCAC+AGG 0.555996 1_3:+28766409 None:intergenic
ATTTAGAGGAGGAGTTCCAA+TGG 0.557133 1_3:+28782233 None:intergenic
AGAATGAAACATGTTTCCAC+TGG 0.557652 1_3:+28767743 None:intergenic
GGAGGTACATTGTGTATGCT+GGG 0.558903 1_3:-28767856 Msa0113090:CDS
TTTCTTAGGGTGGAAATCAA+GGG 0.559171 1_3:+28768290 None:intergenic
GTCTTTGGAGCTATGGCACA+TGG 0.560110 1_3:-28766494 Msa0113090:CDS
TCCTCCGATAACCAAGAGGT+TGG 0.560162 1_3:+28767698 None:intergenic
TCAGGATTAAATCAGGGAGT+TGG 0.560797 1_3:-28781401 Msa0113090:intron
TATGCCTGCAAAGAAAGGCT+TGG 0.561064 1_3:+28768339 None:intergenic
TATCATCACAGGAACAGAAA+AGG 0.561084 1_3:+28768262 None:intergenic
ACTCCATCTATTCATACTCC+TGG 0.561698 1_3:-28776708 Msa0113090:CDS
CCAAGAGGTTGGAGTAACTT+GGG 0.561716 1_3:+28767709 None:intergenic
GCTAATCCTCTTAATCGTTG+TGG 0.565756 1_3:+28781100 None:intergenic
TATGACCATACCAGCTCATG+AGG 0.566508 1_3:-28766458 Msa0113090:CDS
ATGTATGGTACTGAAGGAGC+AGG 0.566645 1_3:-28776624 Msa0113090:CDS
GATATTACACCCTCATGAGC+TGG 0.567462 1_3:+28766448 None:intergenic
CTAAATGCTATCACTACAGA+AGG 0.567631 1_3:-28782216 Msa0113090:CDS
TTAGGTTGTTCTTTGGAACA+TGG 0.568619 1_3:-28771204 Msa0113090:intron
ACAACTAACCTCAAAACAGA+TGG 0.568987 1_3:+28782942 None:intergenic
AATTGAAGGATCCACAGGTA+AGG 0.571880 1_3:+28781737 None:intergenic
CCATAAATTGAAGGATCCAC+AGG 0.574667 1_3:+28781732 None:intergenic
GGTGATGGTGTTGCTATGGC+GGG 0.577539 1_3:-28776687 Msa0113090:CDS
CACAACATTGCCAGATGCTG+CGG 0.578567 1_3:+28768049 None:intergenic
CTCTCACAGGATGATGGTGA+TGG 0.579249 1_3:-28775953 Msa0113090:CDS
TTAAGAGGATTAGCTAGAGG+AGG 0.579927 1_3:-28781091 Msa0113090:CDS
TGTTAACTGAGAGCACGAAT+CGG 0.581557 1_3:-28783144 Msa0113090:five_prime_UTR
ACAGGATGATGGTGATGGAA+AGG 0.581928 1_3:-28775948 Msa0113090:CDS
TGTCACAGGTGATTGTGCTA+GGG 0.582024 1_3:+28766423 None:intergenic
ATTCATGAACTTAATTCCAG+TGG 0.584603 1_3:-28767759 Msa0113090:CDS
ATCAAAACACTGCATTGGGA+TGG 0.586404 1_3:+28782965 None:intergenic
TTGGCAGCTCCTGAAGATGT+AGG 0.588055 1_3:+28776780 None:intergenic
GATCCTTCAATTTATGGGCA+GGG 0.588175 1_3:-28781726 Msa0113090:CDS
CACAGGTGAGGTTTCAGCCA+AGG 0.590433 1_3:-28768088 Msa0113090:CDS
CCAAGCTCAGATGCAAAGAA+GGG 0.590704 1_3:-28782271 Msa0113090:CDS
ATGATGTCTCTGTATCCATA+GGG 0.590798 1_3:+28782124 None:intergenic
CCTATATCAGGATTAAATCA+GGG 0.591636 1_3:-28781407 Msa0113090:intron
TGTATTTCTAGGGACACTCT+GGG 0.591742 1_3:-28767878 Msa0113090:intron
GTTGGTGGTCTCACATTGAA+AGG 0.592499 1_3:-28781383 Msa0113090:CDS
TCCAACCTCTTGGTTATCGG+AGG 0.596783 1_3:-28767699 Msa0113090:CDS
CACTCGAAAAGAAAACCTCC+AGG 0.597741 1_3:+28782510 None:intergenic
GCCATAGCAACACCATCACC+AGG 0.599889 1_3:+28776690 None:intergenic
CTAAGTCATTTATGACAGAA+GGG 0.600445 1_3:-28782643 Msa0113090:CDS
ATGATGATGTATGGTACTGA+AGG 0.600449 1_3:-28776630 Msa0113090:CDS
TTGACGGTTGAGAATTAGAA+GGG 0.600579 1_3:+28776730 None:intergenic
GTGAGGTTTCAGCCAAGGAG+TGG 0.601900 1_3:-28768083 Msa0113090:CDS
GAATGTTGCTGGTGTATCCA+AGG 0.603047 1_3:-28776655 Msa0113090:CDS
TATAGAACTAACTTCACTGA+AGG 0.604171 1_3:+28775795 None:intergenic
GCCATTCTAGCATCTAAAAG+TGG 0.604873 1_3:+28782096 None:intergenic
CTTTCTTTGCAGGCATATAG+CGG 0.607957 1_3:-28768333 Msa0113090:CDS
AGTTCTATACGCAAAAGCAA+TGG 0.612132 1_3:-28775781 Msa0113090:CDS
CAGTGCTGGACATGACAAGA+AGG 0.620953 1_3:-28775713 Msa0113090:intron
CTTGCTCAGGTACATGCACA+AGG 0.621214 1_3:-28781160 Msa0113090:intron
CCTTCAATTTATGGGCAGGG+AGG 0.628421 1_3:-28781723 Msa0113090:CDS
GAAAACGCAGAGCACGCCAG+AGG 0.631839 1_3:-28771174 Msa0113090:CDS
AGTAATCTACATCAACAACT+TGG 0.632603 1_3:+28766229 None:intergenic
AATGTTGCTGGTGTATCCAA+GGG 0.639730 1_3:-28776654 Msa0113090:CDS
TCACTACAGAAGGAATGCTA+GGG 0.640516 1_3:-28782206 Msa0113090:CDS
TCAAACACTGTCATGTGAGG+AGG 0.641378 1_3:+28783105 None:intergenic
CGATTAAGAGGATTAGCTAG+AGG 0.641836 1_3:-28781094 Msa0113090:CDS
ACAATCACCTGTGACAGGGA+TGG 0.644059 1_3:-28766416 Msa0113090:CDS
AGAGGAGGAGTTCCAATGGG+AGG 0.644588 1_3:+28782237 None:intergenic
CTTTCAAACACTGTCATGTG+AGG 0.646035 1_3:+28783102 None:intergenic
GCATTGGGATGGATCATGGA+TGG 0.646608 1_3:+28782976 None:intergenic
AAGGTTTCTCCTGATCCAGT+AGG 0.649090 1_3:-28782620 Msa0113090:intron
AATCTGTAGCATGCTCGGCA+GGG 0.649746 1_3:+28775900 None:intergenic
TAGCACAATCACCTGTGACA+GGG 0.649804 1_3:-28766420 Msa0113090:CDS
GTAGTGATAGCATTTAGAGG+AGG 0.657190 1_3:+28782222 None:intergenic
ACTGGTACAGGAAATACACT+TGG 0.661183 1_3:-28776753 Msa0113090:CDS
GGAGGTTTGAATGTGAAAGA+CGG 0.665080 1_3:-28781073 Msa0113090:CDS
GGTCAACCAATTGCAAACGA+TGG 0.673962 1_3:-28781052 Msa0113090:CDS
TTCATGAATGCAATCACCAG+AGG 0.679527 1_3:+28767773 None:intergenic
TGGCTCCTTAGATGATAATG+TGG 0.680795 1_3:-28775984 Msa0113090:CDS
GCAGCAATTGATGCTCCTGG+AGG 0.684773 1_3:-28782525 Msa0113090:intron
AGGGAGGATCTACACAGGTG+AGG 0.687544 1_3:-28768100 Msa0113090:CDS
CATGCAGAGATCCTTACCTG+TGG 0.696101 1_3:-28781748 Msa0113090:CDS
TATGGTACTGAAGGAGCAGG+CGG 0.696991 1_3:-28776621 Msa0113090:CDS
GGAATTGTATTCTGTGATCG+TGG 0.697145 1_3:-28783013 Msa0113090:five_prime_UTR
ATGACCATACCAGCTCATGA+GGG 0.705801 1_3:-28766457 Msa0113090:CDS
TTCGTGCTCTCAGTTAACAG+AGG 0.706627 1_3:+28783148 None:intergenic
CAAGCAGGGAGGATCTACAC+AGG 0.707367 1_3:-28768105 Msa0113090:intron
CTTCGTTTGATACAACTGTG+CGG 0.708138 1_3:-28771091 Msa0113090:CDS
TTTCTAGGGACACTCTGGGG+AGG 0.715436 1_3:-28767874 Msa0113090:intron
GGTATCCTCCGATAACCAAG+AGG 0.726567 1_3:+28767694 None:intergenic
GTATTTCTAGGGACACTCTG+GGG 0.773362 1_3:-28767877 Msa0113090:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr1_3:28773974-28773993 None:intergenic 0.0%
!! AATATTATTGTATAACTAAA+CGG + chr1_3:28766625-28766644 None:intergenic 10.0%
!! TTTAAATCAATAATCATATT+AGG - chr1_3:28768082-28768101 Msa0113090:CDS 10.0%
!! TTAAATCAATAATCATATTA+GGG - chr1_3:28768083-28768102 Msa0113090:CDS 10.0%
!!! AATTTGTTAATTTGTTAATT+GGG - chr1_3:28771144-28771163 Msa0113090:CDS 10.0%
!! AAAAATACTAATAAAATTCA+AGG + chr1_3:28771243-28771262 None:intergenic 10.0%
!!! TGTAACTTTTATTTTAAATT+AGG - chr1_3:28771294-28771313 Msa0113090:intron 10.0%
!!! TATTTTAGTATTTTTTTCAA+CGG - chr1_3:28771349-28771368 Msa0113090:intron 10.0%
!! GTTTATTATATTATATAATG+TGG - chr1_3:28773760-28773779 Msa0113090:intron 10.0%
!! TTATTATATTATATAATGTG+GGG - chr1_3:28773762-28773781 Msa0113090:intron 10.0%
!! ATTAATCAATACAATAAATA+GGG - chr1_3:28773842-28773861 Msa0113090:intron 10.0%
!!! AAAAAATGCATATTTTTTTA+TGG + chr1_3:28775553-28775572 None:intergenic 10.0%
!! AAATATAGTATATACTATAT+AGG - chr1_3:28778662-28778681 Msa0113090:intron 10.0%
!! TAAATATAAATAGATATGAA+AGG + chr1_3:28781463-28781482 None:intergenic 10.0%
!! AGAATGTAAATTATATTAAA+AGG - chr1_3:28781827-28781846 Msa0113090:intron 10.0%
!!! CTTAATCAATTTTTTTTTTA+AGG + chr1_3:28781874-28781893 None:intergenic 10.0%
!! TTGATTAAGTATATAAATAA+TGG - chr1_3:28781885-28781904 Msa0113090:intron 10.0%
!!! AATTTGTTCATTTAAAAAAT+TGG + chr1_3:28782065-28782084 None:intergenic 10.0%
!! AGATAAAAAAGTTATTATTT+AGG - chr1_3:28782768-28782787 Msa0113090:intron 10.0%
!!! TCTTTTTTTTTTTTTTTGCT+AGG - chr1_3:28766651-28766670 Msa0113090:intron 15.0%
!! TGTTTACATATATGATTATT+TGG - chr1_3:28766679-28766698 Msa0113090:intron 15.0%
!! TATTATGATATTAAAAAAGG+AGG + chr1_3:28766820-28766839 None:intergenic 15.0%
!!! TATTTGAAGTTGAATATATT+TGG + chr1_3:28767346-28767365 None:intergenic 15.0%
!!! TTTTTTTTTCCTTCAAAAAA+AGG + chr1_3:28769052-28769071 None:intergenic 15.0%
!!! TTTTTGAAGGAAAAAAAAAA+AGG - chr1_3:28769053-28769072 Msa0113090:intron 15.0%
!! NNNNNNNNNNTTACCTCTAA+TGG + chr1_3:28769754-28769773 None:intergenic 15.0%
!!! GAATTTGTTAATTTGTTAAT+TGG - chr1_3:28771143-28771162 Msa0113090:CDS 15.0%
!! TAATTTATCACATATTTGAA+CGG - chr1_3:28772351-28772370 Msa0113090:intron 15.0%
!! TAGAAAATGCAAAAATAAAA+AGG + chr1_3:28772465-28772484 None:intergenic 15.0%
!! GATTAATCAATACAATAAAT+AGG - chr1_3:28773841-28773860 Msa0113090:intron 15.0%
!!! TTTGTAGTTTTTTAGTAAAT+CGG + chr1_3:28774854-28774873 None:intergenic 15.0%
!! TTACAGCTATATAATATAAT+AGG - chr1_3:28774965-28774984 Msa0113090:intron 15.0%
!! TACAGCTATATAATATAATA+GGG - chr1_3:28774966-28774985 Msa0113090:intron 15.0%
!!! ATTTTTTTTAAAAGTAACCA+AGG + chr1_3:28775058-28775077 None:intergenic 15.0%
!! TTTATGATTATATGTTTCAT+TGG + chr1_3:28775360-28775379 None:intergenic 15.0%
!!! ATTTTATTATATCTTGTGTT+TGG + chr1_3:28775641-28775660 None:intergenic 15.0%
!!! CATTTGTTTTTAATATGATT+AGG - chr1_3:28775736-28775755 Msa0113090:CDS 15.0%
!!! TCTTTTTCTTATAAAGTAAA+GGG - chr1_3:28776035-28776054 Msa0113090:intron 15.0%
!!! TAGAATTGAATCAATTTTAA+AGG - chr1_3:28776513-28776532 Msa0113090:intron 15.0%
!!! AGAATTGAATCAATTTTAAA+GGG - chr1_3:28776514-28776533 Msa0113090:intron 15.0%
!! TAATATTGATACAATAAGTA+TGG - chr1_3:28776550-28776569 Msa0113090:intron 15.0%
!! ACAACTATTAAAATTAAGTA+AGG + chr1_3:28776910-28776929 None:intergenic 15.0%
!! TTGTAACATAAATAAATGTA+GGG + chr1_3:28777418-28777437 None:intergenic 15.0%
!! TTTGTAACATAAATAAATGT+AGG + chr1_3:28777419-28777438 None:intergenic 15.0%
!! TACATTTATTTATGTTACAA+AGG - chr1_3:28777418-28777437 Msa0113090:intron 15.0%
!! ATCTGTTTATAAGTTTAAAT+TGG + chr1_3:28778069-28778088 None:intergenic 15.0%
!! TTATGAAAGTTACAAATTTA+CGG + chr1_3:28778092-28778111 None:intergenic 15.0%
!! TATTCATTATATATAGTTGA+TGG - chr1_3:28778710-28778729 Msa0113090:intron 15.0%
!! AGAAAAAATATATTGTTGAT+CGG + chr1_3:28779169-28779188 None:intergenic 15.0%
!!! TATTTTTTTATATCTGACAA+AGG - chr1_3:28779975-28779994 Msa0113090:intron 15.0%
!! ACTTTAGATTTATTGAAATT+CGG + chr1_3:28781406-28781425 None:intergenic 15.0%
!! AAATTACGATGTAAATTTAA+AGG + chr1_3:28781912-28781931 None:intergenic 15.0%
!! AAGAAGAAAAATAAGAAAAT+TGG + chr1_3:28782365-28782384 None:intergenic 15.0%
!!! AAAGTTATTATTTAGGATAT+TGG - chr1_3:28782775-28782794 Msa0113090:intron 15.0%
!!! AAAAAAAAGTGTTTTAGAAC+AGG - chr1_3:28766198-28766217 Msa0113090:three_prime_UTR 20.0%
!!! ATGATTTGTTGATTTCAAAA+GGG + chr1_3:28767298-28767317 None:intergenic 20.0%
!!! TTTTTACATGATATAAAGTG+GGG + chr1_3:28767767-28767786 None:intergenic 20.0%
!!! CTTTTTACATGATATAAAGT+GGG + chr1_3:28767768-28767787 None:intergenic 20.0%
!!! TTATTTTGCTTTTACTGTTT+TGG - chr1_3:28767810-28767829 Msa0113090:CDS 20.0%
!!! TATTTTGCTTTTACTGTTTT+GGG - chr1_3:28767811-28767830 Msa0113090:CDS 20.0%
!!! GATTATTTGATGAAATTTTG+TGG + chr1_3:28767913-28767932 None:intergenic 20.0%
!! AAATCTAAATAGAACGTATT+CGG + chr1_3:28768579-28768598 None:intergenic 20.0%
!! CTCTAAATAATAGTCATTTA+AGG + chr1_3:28768810-28768829 None:intergenic 20.0%
!! AAAAAACTATTATTCAGAGA+CGG - chr1_3:28768952-28768971 Msa0113090:intron 20.0%
!!! TTTTAACTGTATATGTGAAA+CGG + chr1_3:28769394-28769413 None:intergenic 20.0%
!!! TTTGGCTTTATTGTTAAAAA+TGG + chr1_3:28769539-28769558 None:intergenic 20.0%
!! TAAAATTATTGTAGTTTCCT+AGG - chr1_3:28769640-28769659 Msa0113090:intron 20.0%
!! AAAATTATTGTAGTTTCCTA+GGG - chr1_3:28769641-28769660 Msa0113090:intron 20.0%
!! AAATTACCAAAATACTGTTT+CGG + chr1_3:28771433-28771452 None:intergenic 20.0%
!!! TTTTGGTAATTTTTCTTTTG+TGG - chr1_3:28771441-28771460 Msa0113090:intron 20.0%
!! ATGTAAAGTAGTAAGATATT+TGG - chr1_3:28771638-28771657 Msa0113090:intron 20.0%
!! ATATTTGGATAAATTGTTCT+GGG - chr1_3:28771653-28771672 Msa0113090:intron 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + chr1_3:28771739-28771758 None:intergenic 20.0%
!!! AGTGTTTGTTATAAGTAAAA+TGG + chr1_3:28771739-28771758 None:intergenic 20.0%
!! ATGTATATTTGAACATGATT+TGG - chr1_3:28772180-28772199 Msa0113090:intron 20.0%
!! TATTATAGAATAACCGAAAA+AGG - chr1_3:28772560-28772579 Msa0113090:intron 20.0%
!! CTTACATCAAATGTTTAATT+TGG + chr1_3:28772932-28772951 None:intergenic 20.0%
!! ATTTGATGTAAGAAATGTTA+TGG - chr1_3:28772940-28772959 Msa0113090:intron 20.0%
!! AATCATTTACCAAAAATGAA+AGG + chr1_3:28773011-28773030 None:intergenic 20.0%
!!! ATAATATTCTTGATTTGCAA+AGG - chr1_3:28773201-28773220 Msa0113090:intron 20.0%
!! AAGATTCAGCTAAAAATATA+GGG + chr1_3:28773279-28773298 None:intergenic 20.0%
!! TAAGATTCAGCTAAAAATAT+AGG + chr1_3:28773280-28773299 None:intergenic 20.0%
!!! ATATTTTTAGCTGAATCTTA+TGG - chr1_3:28773280-28773299 Msa0113090:intron 20.0%
!!! TCTTTAATTTACTGATATAG+AGG - chr1_3:28773694-28773713 Msa0113090:intron 20.0%
!! TAGTTAATCCTCAATTAATA+GGG - chr1_3:28773816-28773835 Msa0113090:intron 20.0%
!!! ATCTTTGATTTAGAATTCAT+TGG + chr1_3:28773945-28773964 None:intergenic 20.0%
!! AGACAATAATAAGACTAATA+TGG + chr1_3:28774154-28774173 None:intergenic 20.0%
!! TACAAAAACAAAAAGTGAAT+AGG + chr1_3:28774306-28774325 None:intergenic 20.0%
!!! TTTTTGTTTTTGTAATCCTT+AGG - chr1_3:28774312-28774331 Msa0113090:intron 20.0%
!!! TTTTGTTTTTGTAATCCTTA+GGG - chr1_3:28774313-28774332 Msa0113090:intron 20.0%
!! AAAAAGACAAGAAAAATCAA+TGG + chr1_3:28774940-28774959 None:intergenic 20.0%
!! ACAGCTATATAATATAATAG+GGG - chr1_3:28774967-28774986 Msa0113090:intron 20.0%
!!! AGGAATAGTTAAAATTTGTT+TGG + chr1_3:28775038-28775057 None:intergenic 20.0%
!!! AACAAATTTTAACTATTCCT+TGG - chr1_3:28775038-28775057 Msa0113090:intron 20.0%
!!! TACTTTTAAAAAAAATTCCC+AGG - chr1_3:28775062-28775081 Msa0113090:intron 20.0%
!!! ATAATGTAGAAAAAAGTGTT+TGG + chr1_3:28775102-28775121 None:intergenic 20.0%
!! GTAATATCAATAATCATATC+AGG + chr1_3:28775231-28775250 None:intergenic 20.0%
!!! AAAATTGGAGTATTTATTGA+GGG + chr1_3:28775980-28775999 None:intergenic 20.0%
!!! AAAAATTGGAGTATTTATTG+AGG + chr1_3:28775981-28776000 None:intergenic 20.0%
!! AAATTGTATGAGAGAAAAAT+TGG + chr1_3:28775995-28776014 None:intergenic 20.0%
!!! GTCTTTTTCTTATAAAGTAA+AGG - chr1_3:28776034-28776053 Msa0113090:intron 20.0%
!! TTGATTCTTAATATTAACAG+AGG + chr1_3:28776280-28776299 None:intergenic 20.0%
!!! GAATTGAATCAATTTTAAAG+GGG - chr1_3:28776515-28776534 Msa0113090:intron 20.0%
!! TGAAGATACTAATACATTTA+TGG - chr1_3:28776650-28776669 Msa0113090:CDS 20.0%
!! GAAGATACTAATACATTTAT+GGG - chr1_3:28776651-28776670 Msa0113090:CDS 20.0%
!!! TTATGGGTTAATTATGTTTT+AGG - chr1_3:28776667-28776686 Msa0113090:CDS 20.0%
!! ATTGTTAGACAATAGAATAA+AGG + chr1_3:28777444-28777463 None:intergenic 20.0%
!! TAGAAATCAAAATAACAGAT+TGG + chr1_3:28777485-28777504 None:intergenic 20.0%
!!! AGGTTTAATATTTTTTAGAC+AGG + chr1_3:28777543-28777562 None:intergenic 20.0%
!!! TAAAAGTTTTAGCAAAACTA+GGG + chr1_3:28777756-28777775 None:intergenic 20.0%
!!! TTAAAAGTTTTAGCAAAACT+AGG + chr1_3:28777757-28777776 None:intergenic 20.0%
!!! TAAAACTTTTAAAAGTAACC+TGG - chr1_3:28777765-28777784 Msa0113090:intron 20.0%
!! TAATCAAGAATATATTCCAT+AGG - chr1_3:28777831-28777850 Msa0113090:intron 20.0%
!! TGTTTATAAGTTTAAATTGG+TGG + chr1_3:28778066-28778085 None:intergenic 20.0%
!!! GTTACGACTTTTTTTTTTTT+TGG - chr1_3:28778460-28778479 Msa0113090:intron 20.0%
!!! GAAATATAGGTTTTAGTAAA+TGG + chr1_3:28778835-28778854 None:intergenic 20.0%
!!! TTTTGAGTTGGTTTTTTTAA+AGG - chr1_3:28778908-28778927 Msa0113090:intron 20.0%
!!! ATATTTTTTCTTCGATGATT+TGG - chr1_3:28779178-28779197 Msa0113090:intron 20.0%
!!! TATTTTTTCTTCGATGATTT+GGG - chr1_3:28779179-28779198 Msa0113090:intron 20.0%
!!! GAAGTTGTAATTTTAATATG+AGG + chr1_3:28780789-28780808 None:intergenic 20.0%
!!! TCTTTTTTAATATTGTCCTT+TGG - chr1_3:28780875-28780894 Msa0113090:intron 20.0%
!! ATTATAACACTAAATACCAA+AGG + chr1_3:28780894-28780913 None:intergenic 20.0%
!! GAGCAAAATCAAATAAATTT+CGG + chr1_3:28781196-28781215 None:intergenic 20.0%
!! TTAGAATTGTATGTATTTCT+AGG - chr1_3:28781480-28781499 Msa0113090:intron 20.0%
!!! TAGAATTGTATGTATTTCTA+GGG - chr1_3:28781481-28781500 Msa0113090:intron 20.0%
!!! AGTTTACTACTATATTTTTC+AGG - chr1_3:28781726-28781745 Msa0113090:CDS 20.0%
!! GGAAATAAGAATTATTATTC+AGG + chr1_3:28781853-28781872 None:intergenic 20.0%
!! AAAAAATACTATTCACAGTT+TGG + chr1_3:28782028-28782047 None:intergenic 20.0%
!!! AAAATTGGACTTTTGAAATA+AGG + chr1_3:28782350-28782369 None:intergenic 20.0%
!! AGCTTAATATAAATGTTGTT+TGG - chr1_3:28782412-28782431 Msa0113090:intron 20.0%
!! AGATTACTCGAAAAATAAAT+TGG - chr1_3:28783155-28783174 Msa0113090:five_prime_UTR 20.0%
!! GATTACTCGAAAAATAAATT+GGG - chr1_3:28783156-28783175 Msa0113090:five_prime_UTR 20.0%
! TGTAAGAACTGTATTATGTT+TGG - chr1_3:28766590-28766609 Msa0113090:intron 25.0%
! TTAAAGCTAAATGAAGAGAT+GGG + chr1_3:28766967-28766986 None:intergenic 25.0%
! ATTAAAGCTAAATGAAGAGA+TGG + chr1_3:28766968-28766987 None:intergenic 25.0%
!!! GATGATTTGTTGATTTCAAA+AGG + chr1_3:28767299-28767318 None:intergenic 25.0%
! AATAGTATAGTATATTACCC+AGG + chr1_3:28767321-28767340 None:intergenic 25.0%
! TGGGTAATATACTATACTAT+TGG - chr1_3:28767320-28767339 Msa0113090:intron 25.0%
! ACACCTTAAAATATAGTGTA+CGG + chr1_3:28767541-28767560 None:intergenic 25.0%
! TCTGAAAGTTTAAGTGAATT+TGG - chr1_3:28767736-28767755 Msa0113090:CDS 25.0%
!! CCTTTTTACATGATATAAAG+TGG + chr1_3:28767769-28767788 None:intergenic 25.0%
! CCACTTTATATCATGTAAAA+AGG - chr1_3:28767766-28767785 Msa0113090:CDS 25.0%
! CATCAAATAATCATCTTTCT+AGG - chr1_3:28767921-28767940 Msa0113090:intron 25.0%
! ATAACAAAACTCACAGTTAA+AGG + chr1_3:28768016-28768035 None:intergenic 25.0%
!! TATTGATGGTTATCTAAAAG+TGG + chr1_3:28768050-28768069 None:intergenic 25.0%
! AATCTAAATAGAACGTATTC+GGG + chr1_3:28768578-28768597 None:intergenic 25.0%
! TTGACTAACTTATTATCTGA+AGG + chr1_3:28768634-28768653 None:intergenic 25.0%
! AGGTTTATACACGATTATTA+AGG + chr1_3:28768790-28768809 None:intergenic 25.0%
! TGTTTACTACACATTAAGTT+TGG + chr1_3:28768990-28769009 None:intergenic 25.0%
!!! TCTAACTTACCTTTTTTTGA+AGG - chr1_3:28769040-28769059 Msa0113090:intron 25.0%
!!! TTGTTTTTTTACTCAGATGT+AGG + chr1_3:28769575-28769594 None:intergenic 25.0%
! TGTGTAGTGTTTATATAACT+TGG - chr1_3:28770169-28770188 Msa0113090:intron 25.0%
! GTGTAGTGTTTATATAACTT+GGG - chr1_3:28770170-28770189 Msa0113090:intron 25.0%
! TAAATCAACCTTACAAAAAC+CGG + chr1_3:28770214-28770233 None:intergenic 25.0%
! TGTGTAATGTTTATAAAGCT+TGG - chr1_3:28770475-28770494 Msa0113090:intron 25.0%
!!! GTTAGTTGGTCTTAAAATTT+GGG + chr1_3:28770549-28770568 None:intergenic 25.0%
!!! AGTTAGTTGGTCTTAAAATT+TGG + chr1_3:28770550-28770569 None:intergenic 25.0%
! CAACTAACTAACTAACAAAA+GGG - chr1_3:28770561-28770580 Msa0113090:intron 25.0%
!!! TTGTTAATTTGTTAATTGGG+AGG - chr1_3:28771147-28771166 Msa0113090:CDS 25.0%
!!! TTTGTTACTTTAAGCTTTAG+AGG - chr1_3:28771201-28771220 Msa0113090:CDS 25.0%
! TGAACTTTGAGTAATGTTTA+AGG - chr1_3:28771326-28771345 Msa0113090:intron 25.0%
!!! AGCTTTCTGTTATCATTTTT+AGG - chr1_3:28771579-28771598 Msa0113090:intron 25.0%
! AAGAATGAAAAAAAACGAGA+AGG - chr1_3:28771605-28771624 Msa0113090:intron 25.0%
! GATATTTGGATAAATTGTTC+TGG - chr1_3:28771652-28771671 Msa0113090:intron 25.0%
! AGTATATTATTCAGTGTACT+AGG - chr1_3:28771691-28771710 Msa0113090:intron 25.0%
! TTATAACAAACACTTAGAGT+TGG - chr1_3:28771745-28771764 Msa0113090:intron 25.0%
! GATGATTAACGAATATAACA+AGG - chr1_3:28772045-28772064 Msa0113090:intron 25.0%
! GTATATTTGAACAAAAGTTG+TGG - chr1_3:28772120-28772139 Msa0113090:intron 25.0%
! TTCAAATATACATGATTCTG+AGG + chr1_3:28772173-28772192 None:intergenic 25.0%
!! ATATTTGAACATGATTTGGA+TGG - chr1_3:28772184-28772203 Msa0113090:intron 25.0%
! ATGTGATAAATTACGTTTAG+TGG + chr1_3:28772344-28772363 None:intergenic 25.0%
! ATACATTAATAATTCTCCCT+GGG + chr1_3:28772833-28772852 None:intergenic 25.0%
! AATACATTAATAATTCTCCC+TGG + chr1_3:28772834-28772853 None:intergenic 25.0%
! TATTTGTAAGCAACATATGT+AGG + chr1_3:28772860-28772879 None:intergenic 25.0%
! TACTCCTACTTTAATATACA+GGG + chr1_3:28772973-28772992 None:intergenic 25.0%
! ATACTCCTACTTTAATATAC+AGG + chr1_3:28772974-28772993 None:intergenic 25.0%
! TGTATATTAAAGTAGGAGTA+TGG - chr1_3:28772973-28772992 Msa0113090:intron 25.0%
!! GTATATTAAAGTAGGAGTAT+GGG - chr1_3:28772974-28772993 Msa0113090:intron 25.0%
!! TATATTAAAGTAGGAGTATG+GGG - chr1_3:28772975-28772994 Msa0113090:intron 25.0%
!!! TTAATTGTTTTTACTCTGCA+TGG - chr1_3:28773137-28773156 Msa0113090:intron 25.0%
!!! TAATTGTTTTTACTCTGCAT+GGG - chr1_3:28773138-28773157 Msa0113090:intron 25.0%
! TTCAGTCTTAGTATAACTAT+TGG + chr1_3:28773735-28773754 None:intergenic 25.0%
! CTATTAATTGAGGATTAACT+AGG + chr1_3:28773817-28773836 None:intergenic 25.0%
! CTAGTTAATCCTCAATTAAT+AGG - chr1_3:28773815-28773834 Msa0113090:intron 25.0%
! TTAATCTTCCCTATTAATTG+AGG + chr1_3:28773827-28773846 None:intergenic 25.0%
! ATCAATACAATAAATAGGGA+AGG - chr1_3:28773846-28773865 Msa0113090:intron 25.0%
! TGAATTCTAAATCAAAGATC+TGG - chr1_3:28773946-28773965 Msa0113090:intron 25.0%
! AATAGGATAGGATTAGAAAT+AGG + chr1_3:28774289-28774308 None:intergenic 25.0%
! AAACAAAAAGTGAATAGGAT+AGG + chr1_3:28774301-28774320 None:intergenic 25.0%
!!! TTTGTTTTTGTAATCCTTAG+GGG - chr1_3:28774314-28774333 Msa0113090:intron 25.0%
!!! TGGTTTTTTACTATGAAAGT+GGG + chr1_3:28774549-28774568 None:intergenic 25.0%
!!! ATGGTTTTTTACTATGAAAG+TGG + chr1_3:28774550-28774569 None:intergenic 25.0%
! TTAATCTCAAAGCAATCAAT+TGG + chr1_3:28774651-28774670 None:intergenic 25.0%
! ATTATATATCTGCAATCTGT+TGG + chr1_3:28774897-28774916 None:intergenic 25.0%
! AACAGATTGCAGATATATAA+TGG - chr1_3:28774896-28774915 Msa0113090:intron 25.0%
!!! AGAATTTTAACATTAATCCC+AGG - chr1_3:28774997-28775016 Msa0113090:intron 25.0%
!!! TGGTTAGTATTTTAATTCCT+GGG + chr1_3:28775082-28775101 None:intergenic 25.0%
!!! TTGGTTAGTATTTTAATTCC+TGG + chr1_3:28775083-28775102 None:intergenic 25.0%
! CTGTCATAAATTAGTTAAGA+CGG - chr1_3:28775838-28775857 Msa0113090:intron 25.0%
!!! AAGTGACACTTATTTTGAAA+CGG + chr1_3:28775879-28775898 None:intergenic 25.0%
! TACTATTGTCTATATATGAG+AGG - chr1_3:28776351-28776370 Msa0113090:intron 25.0%
! ACTATTGTCTATATATGAGA+GGG - chr1_3:28776352-28776371 Msa0113090:intron 25.0%
!!! AGGAAATCTTTTAGTTTATG+AGG - chr1_3:28776384-28776403 Msa0113090:intron 25.0%
!! ATTGATTCAATTCTATGACA+TGG + chr1_3:28776508-28776527 None:intergenic 25.0%
! TACAATAAGTATGGTAAAGA+AGG - chr1_3:28776559-28776578 Msa0113090:intron 25.0%
!!! ACATCTGACTTTTTTTTGTT+GGG - chr1_3:28776836-28776855 Msa0113090:intron 25.0%
!! TAAAATGCCTCGATTTTATA+GGG + chr1_3:28776879-28776898 None:intergenic 25.0%
!! TTAAAATGCCTCGATTTTAT+AGG + chr1_3:28776880-28776899 None:intergenic 25.0%
!!! GAATGCATAGTATTTTTGTA+AGG + chr1_3:28776939-28776958 None:intergenic 25.0%
!! TTAAAATGCCTCCATTTTAT+AGG - chr1_3:28777190-28777209 Msa0113090:intron 25.0%
!! TAAAATGCCTCCATTTTATA+GGG - chr1_3:28777191-28777210 Msa0113090:intron 25.0%
!!! TGTTTTTAGTCCCTATAAAA+TGG + chr1_3:28776866-28776885 None:intergenic 25.0%
!!! TTTTTTTCCGTTAGCAAAAT+AGG + chr1_3:28777310-28777329 None:intergenic 25.0%
!! TGTAGGGTTAATTATGTTTT+AGG + chr1_3:28777402-28777421 None:intergenic 25.0%
!! CAGAATATAAGGATCTTTTA+GGG + chr1_3:28777667-28777686 None:intergenic 25.0%
! TCAACACCATCAAATAATAT+TGG - chr1_3:28777720-28777739 Msa0113090:intron 25.0%
!!! CTTGATTATTTAAGAGCATT+AGG + chr1_3:28777819-28777838 None:intergenic 25.0%
! AAATTGGAATGAATGATTCA+TGG - chr1_3:28778031-28778050 Msa0113090:intron 25.0%
! AATTGGAATGAATGATTCAT+GGG - chr1_3:28778032-28778051 Msa0113090:intron 25.0%
! ATTCATTCTTACAGTGATTA+GGG + chr1_3:28778600-28778619 None:intergenic 25.0%
!! TTACGAAAACTTACTTGTTT+TGG - chr1_3:28778770-28778789 Msa0113090:intron 25.0%
!!! TTTTTAAAGGTTTCTGAATC+TGG - chr1_3:28778921-28778940 Msa0113090:intron 25.0%
! AAAACTAGATGTATTACAGA+AGG + chr1_3:28779146-28779165 None:intergenic 25.0%
! TATTCACATCATAAATGTAG+TGG - chr1_3:28779361-28779380 Msa0113090:intron 25.0%
! AGAAATGAATAAAACTCAGA+TGG - chr1_3:28779628-28779647 Msa0113090:intron 25.0%
! AAAACTCAGATGGTAAATAA+AGG - chr1_3:28779638-28779657 Msa0113090:intron 25.0%
! AAACTCAGATGGTAAATAAA+GGG - chr1_3:28779639-28779658 Msa0113090:intron 25.0%
!! AGATTTTACCACTATTTGAT+GGG + chr1_3:28779687-28779706 None:intergenic 25.0%
!! AAGATTTTACCACTATTTGA+TGG + chr1_3:28779688-28779707 None:intergenic 25.0%
! TCAAATAGTGGTAAAATCTT+TGG - chr1_3:28779688-28779707 Msa0113090:intron 25.0%
! ACAATATGCATTAGAATTGT+CGG - chr1_3:28779792-28779811 Msa0113090:intron 25.0%
!! TTCCATTTGTGTAATTGTTT+TGG - chr1_3:28780458-28780477 Msa0113090:intron 25.0%
!! TCCATTTGTGTAATTGTTTT+GGG - chr1_3:28780459-28780478 Msa0113090:intron 25.0%
! TGGATAAAACTTCTATCAAA+GGG - chr1_3:28780818-28780837 Msa0113090:intron 25.0%
! TTTAGTGTTATAATGAAACC+AGG - chr1_3:28780900-28780919 Msa0113090:intron 25.0%
!!! AGAAAAGGTCATTTTTCTTA+GGG + chr1_3:28781095-28781114 None:intergenic 25.0%
! CTCATTAAATTTATCAAGCA+GGG - chr1_3:28781250-28781269 Msa0113090:intron 25.0%
! ATCTTCTACTTCAAAGTAAA+AGG + chr1_3:28782442-28782461 None:intergenic 25.0%
! AGATAAGTCAATAAAAAGTC+AGG - chr1_3:28782458-28782477 Msa0113090:CDS 25.0%
! CAAATAAAGTAAAGTCGTAA+AGG - chr1_3:28782683-28782702 Msa0113090:CDS 25.0%
!!! TATGGTCATACATTTGTTTT+CGG + chr1_3:28782901-28782920 None:intergenic 25.0%
! ATCAGGAAGAAAAACCTTTT+CGG + chr1_3:28766334-28766353 None:intergenic 30.0%
! AAAAGGTTTTTCTTCCTGAT+CGG - chr1_3:28766334-28766353 Msa0113090:three_prime_UTR 30.0%
TGAGCTGAATTGAATTGAAT+TGG + chr1_3:28766466-28766485 None:intergenic 30.0%
CTAAGTCATTTATGACAGAA+GGG - chr1_3:28766726-28766745 Msa0113090:intron 30.0%
TAAAGCTAAATGAAGAGATG+GGG + chr1_3:28766966-28766985 None:intergenic 30.0%
TTGAAATCAACAAATCATCC+TGG - chr1_3:28767300-28767319 Msa0113090:intron 30.0%
TGAAATCAACAAATCATCCT+GGG - chr1_3:28767301-28767320 Msa0113090:intron 30.0%
AAAATATAGTGTACGGAGAA+AGG + chr1_3:28767534-28767553 None:intergenic 30.0%
! TCTCCGTACACTATATTTTA+AGG - chr1_3:28767535-28767554 Msa0113090:intron 30.0%
TATCAAAAACGAAGTCAACA+TGG - chr1_3:28767594-28767613 Msa0113090:intron 30.0%
ATCAAAAACGAAGTCAACAT+GGG - chr1_3:28767595-28767614 Msa0113090:intron 30.0%
TAATTCTCTTCTCCTATATC+AGG - chr1_3:28767950-28767969 Msa0113090:intron 30.0%
TCCTATATCAGGATTAAATC+AGG - chr1_3:28767961-28767980 Msa0113090:intron 30.0%
CCTATATCAGGATTAAATCA+GGG - chr1_3:28767962-28767981 Msa0113090:intron 30.0%
AACCATCAATATATCTGATC+TGG - chr1_3:28768059-28768078 Msa0113090:CDS 30.0%
AACCAGATCAGATATATTGA+TGG + chr1_3:28768064-28768083 None:intergenic 30.0%
TTAGATGAAGTAGATTGCAT+TGG + chr1_3:28768356-28768375 None:intergenic 30.0%
AATGCAATCTACTTCATCTA+AGG - chr1_3:28768355-28768374 Msa0113090:intron 30.0%
! TGAACTTGATAATACTCTGA+TGG - chr1_3:28768418-28768437 Msa0113090:intron 30.0%
TTCTGTGAAAATATAACCCA+TGG + chr1_3:28768522-28768541 None:intergenic 30.0%
ATTATTTAGAGATGAACCCA+CGG - chr1_3:28768819-28768838 Msa0113090:intron 30.0%
TGTGTAGTAAACACATTCAA+AGG - chr1_3:28768997-28769016 Msa0113090:intron 30.0%
! AATAACGATTTTGCTTCCAA+CGG - chr1_3:28769327-28769346 Msa0113090:intron 30.0%
! AAATGAATTTTCTTGCTCCA+CGG + chr1_3:28769439-28769458 None:intergenic 30.0%
! TTTTGCAAGCATGTATGTAA+TGG + chr1_3:28769497-28769516 None:intergenic 30.0%
ATTACATACATGCTTGCAAA+AGG - chr1_3:28769496-28769515 Msa0113090:intron 30.0%
! GTAGGTGAAATTGTAGTTTT+TGG + chr1_3:28769557-28769576 None:intergenic 30.0%
TAGTTTCCTAGGGAAAAAAA+GGG - chr1_3:28769651-28769670 Msa0113090:intron 30.0%
AAGATGTAATACACACTACA+GGG - chr1_3:28769876-28769895 Msa0113090:intron 30.0%
!! GGTTTTTGTAAGGTTGATTT+AGG - chr1_3:28770213-28770232 Msa0113090:intron 30.0%
!! TAACACAATGAAAGTGTTTG+AGG + chr1_3:28770409-28770428 None:intergenic 30.0%
TCAAACACTTTCATTGTGTT+AGG - chr1_3:28770408-28770427 Msa0113090:intron 30.0%
!! TTGGTCTTAAAATTTGGGTT+GGG + chr1_3:28770544-28770563 None:intergenic 30.0%
! CCTTTTGTTAGTTAGTTAGT+TGG + chr1_3:28770563-28770582 None:intergenic 30.0%
CCAACTAACTAACTAACAAA+AGG - chr1_3:28770560-28770579 Msa0113090:intron 30.0%
ATTAACTCTCTTCATATCAC+TGG + chr1_3:28770606-28770625 None:intergenic 30.0%
!!! TGAAAGGGTATTTTACACAT+GGG + chr1_3:28770828-28770847 None:intergenic 30.0%
!!! TCAAACGGTTTTAAGTGAAA+GGG + chr1_3:28770843-28770862 None:intergenic 30.0%
!!! TTCAAACGGTTTTAAGTGAA+AGG + chr1_3:28770844-28770863 None:intergenic 30.0%
!!! TGTGTTGTTTTGACACAAAA+TGG - chr1_3:28771954-28771973 Msa0113090:intron 30.0%
AAATTCGACTACAATTCAGA+TGG - chr1_3:28771984-28772003 Msa0113090:intron 30.0%
TGTAGTTAATTGTGTTACGT+GGG + chr1_3:28772090-28772109 None:intergenic 30.0%
TTGTAGTTAATTGTGTTACG+TGG + chr1_3:28772091-28772110 None:intergenic 30.0%
CACAATTAACTACAATTCTC+AGG - chr1_3:28772096-28772115 Msa0113090:intron 30.0%
GATGGTTAACGAATATAACA+AGG + chr1_3:28772314-28772333 None:intergenic 30.0%
! AATTACGTTTAGTGGATGAA+TGG + chr1_3:28772336-28772355 None:intergenic 30.0%
TAAACTGACAACAATTTGGA+TGG + chr1_3:28772383-28772402 None:intergenic 30.0%
TAGAATAACCGAAAAAGGAA+AGG - chr1_3:28772565-28772584 Msa0113090:intron 30.0%
AGAATAACCGAAAAAGGAAA+GGG - chr1_3:28772566-28772585 Msa0113090:intron 30.0%
!! TACCAAAAATGAAAGGCATT+GGG + chr1_3:28773004-28773023 None:intergenic 30.0%
! TTACCAAAAATGAAAGGCAT+TGG + chr1_3:28773005-28773024 None:intergenic 30.0%
!!! GTTCATTTTGTTTTAGTTGC+AGG - chr1_3:28773337-28773356 Msa0113090:intron 30.0%
!!! ATTTTGTTTTAGTTGCAGGA+TGG - chr1_3:28773341-28773360 Msa0113090:intron 30.0%
TGATTCCACATTATCATCTA+AGG + chr1_3:28773393-28773412 None:intergenic 30.0%
TAATGTACTTATGTGCCTAT+CGG - chr1_3:28773507-28773526 Msa0113090:intron 30.0%
CGTAAATAACAAAAACCGAT+AGG + chr1_3:28773525-28773544 None:intergenic 30.0%
! GTTATTTACGTTGACTGTAT+AGG - chr1_3:28773535-28773554 Msa0113090:intron 30.0%
TATAGAACTAACTTCACTGA+AGG + chr1_3:28773577-28773596 None:intergenic 30.0%
GGGAGAATGTACATTTATAT+AGG - chr1_3:28773782-28773801 Msa0113090:intron 30.0%
GAATGTACATTTATATAGGC+AGG - chr1_3:28773786-28773805 Msa0113090:intron 30.0%
TTAATTGAGGATTAACTAGG+AGG + chr1_3:28773814-28773833 None:intergenic 30.0%
ATTATTGTCTGCTCCTATTA+CGG - chr1_3:28774164-28774183 Msa0113090:intron 30.0%
!!! TTGTTTTTGTAATCCTTAGG+GGG - chr1_3:28774315-28774334 Msa0113090:intron 30.0%
! TATTCCTTGGCATATTTTTC+TGG + chr1_3:28774424-28774443 None:intergenic 30.0%
!!! ACTGCTGTTATTTTTTTCCT+GGG + chr1_3:28774454-28774473 None:intergenic 30.0%
!!! AACTGCTGTTATTTTTTTCC+TGG + chr1_3:28774455-28774474 None:intergenic 30.0%
CATTTGACAGGAATAAAACA+GGG + chr1_3:28774492-28774511 None:intergenic 30.0%
TCATTTGACAGGAATAAAAC+AGG + chr1_3:28774493-28774512 None:intergenic 30.0%
!! TGTTTTATTCCTGTCAAATG+AGG - chr1_3:28774492-28774511 Msa0113090:intron 30.0%
!!! GGTTTTTTACTATGAAAGTG+GGG + chr1_3:28774548-28774567 None:intergenic 30.0%
! AAGTGAAATAGGGGTATAAA+TGG + chr1_3:28774569-28774588 None:intergenic 30.0%
AGAAGAAGAAGAAGAAGAAT+AGG + chr1_3:28774599-28774618 None:intergenic 30.0%
GGAACATATGTATAATAGAG+CGG + chr1_3:28774822-28774841 None:intergenic 30.0%
!!! ACTTTTTTCTACATTATCCC+AGG - chr1_3:28775105-28775124 Msa0113090:intron 30.0%
GTGTTCAAAAACTATTCAGT+AGG + chr1_3:28775253-28775272 None:intergenic 30.0%
ACTCGTATAATCTTGAAACT+AGG - chr1_3:28775274-28775293 Msa0113090:intron 30.0%
ACCTATGTTTGTTCAATCAA+TGG - chr1_3:28775314-28775333 Msa0113090:intron 30.0%
! TCCATTGATTGAACAAACAT+AGG + chr1_3:28775318-28775337 None:intergenic 30.0%
GTATATGATTCCATCTTAAC+AGG - chr1_3:28775771-28775790 Msa0113090:CDS 30.0%
! GAGTTTTTAACGCATAGAAA+AGG - chr1_3:28775813-28775832 Msa0113090:intron 30.0%
GTATTTATTGAGGGTAAAGT+TGG + chr1_3:28775971-28775990 None:intergenic 30.0%
AGCATGAGGAAAAATGTATT+GGG + chr1_3:28776232-28776251 None:intergenic 30.0%
TTCTATGACATGGCAAAATA+AGG + chr1_3:28776498-28776517 None:intergenic 30.0%
!! TGTTTTAGGTCCCTATAAAT+AGG - chr1_3:28776681-28776700 Msa0113090:CDS 30.0%
ATTTAAGTAGGGACTAATGT+TGG + chr1_3:28777355-28777374 None:intergenic 30.0%
!!! TTTTTTCCCGTTAGCAAAAT+AGG - chr1_3:28776759-28776778 Msa0113090:CDS 30.0%
CAACAAAAAAAAGTCAGATG+TGG + chr1_3:28776837-28776856 None:intergenic 30.0%
!!! CACATCTGACTTTTTTTTGT+TGG - chr1_3:28776835-28776854 Msa0113090:intron 30.0%
! TTTTAGTCCCTATAAAATCG+AGG - chr1_3:28776869-28776888 Msa0113090:intron 30.0%
GAACAAATTTGAATTGAGCA+GGG + chr1_3:28776971-28776990 None:intergenic 30.0%
TGAACAAATTTGAATTGAGC+AGG + chr1_3:28776972-28776991 None:intergenic 30.0%
!!! TTTGCGATAATTTTTTGCAG+AGG + chr1_3:28777063-28777082 None:intergenic 30.0%
! TTTTAGTCCCTATAAAATGG+AGG + chr1_3:28777201-28777220 None:intergenic 30.0%
!!! CACATCTGACTTTTTTTGTT+GGG + chr1_3:28777234-28777253 None:intergenic 30.0%
ATTTAAGTAGGGACTAATGT+TGG - chr1_3:28777355-28777374 Msa0113090:intron 30.0%
!! TGTTTTAGGTCCCTATAAAT+AGG + chr1_3:28776681-28776700 None:intergenic 30.0%
!! TAGACAGGATTCTTTTGATT+TGG + chr1_3:28777528-28777547 None:intergenic 30.0%
TCACTTCCACTTCAAAATAA+CGG + chr1_3:28777580-28777599 None:intergenic 30.0%
!! TTTCGTTTTTACCTTGGATT+TGG + chr1_3:28777611-28777630 None:intergenic 30.0%
CTTTGAATCTACTTTGGTAA+GGG + chr1_3:28777634-28777653 None:intergenic 30.0%
! GCAGAATATAAGGATCTTTT+AGG + chr1_3:28777668-28777687 None:intergenic 30.0%
TCACCAAATGAACTAAAGAA+TGG - chr1_3:28777690-28777709 Msa0113090:intron 30.0%
! CTACCATTCTTTAGTTCATT+TGG + chr1_3:28777696-28777715 None:intergenic 30.0%
!! AACTTTTAAAAGTAACCTGG+TGG - chr1_3:28777768-28777787 Msa0113090:intron 30.0%
ATTCTGTATTCATCAGACAT+TGG - chr1_3:28777932-28777951 Msa0113090:intron 30.0%
AAAGAACAACCTAATGACAA+GGG + chr1_3:28778159-28778178 None:intergenic 30.0%
TCTCTTTAAACTGTTAGTGT+TGG - chr1_3:28778337-28778356 Msa0113090:intron 30.0%
AGTAAACTTATAATCCCCAT+GGG + chr1_3:28778436-28778455 None:intergenic 30.0%
AAGTAAACTTATAATCCCCA+TGG + chr1_3:28778437-28778456 None:intergenic 30.0%
CATTCATTCTTACAGTGATT+AGG + chr1_3:28778601-28778620 None:intergenic 30.0%
! TTTTTCACGACGTGAAATAT+AGG + chr1_3:28778848-28778867 None:intergenic 30.0%
TATTTCACGTCGTGAAAAAA+AGG - chr1_3:28778849-28778868 Msa0113090:intron 30.0%
TCAAACACTTTATTGGGATT+AGG + chr1_3:28778965-28778984 None:intergenic 30.0%
TTAAGGAAGAATTGCTTATG+CGG - chr1_3:28778994-28779013 Msa0113090:intron 30.0%
TCACGATAAATTGACAATAG+AGG - chr1_3:28779519-28779538 Msa0113090:intron 30.0%
GAACACAAAACTAATGCATA+AGG - chr1_3:28779541-28779560 Msa0113090:intron 30.0%
AACCCATAAACTGATGTAAA+AGG - chr1_3:28779589-28779608 Msa0113090:intron 30.0%
! GACCTTTTACATCAGTTTAT+GGG + chr1_3:28779594-28779613 None:intergenic 30.0%
! AGACCTTTTACATCAGTTTA+TGG + chr1_3:28779595-28779614 None:intergenic 30.0%
TAAACTGATGTAAAAGGTCT+AGG - chr1_3:28779595-28779614 Msa0113090:intron 30.0%
AGATGGTAAATAAAGGGTTT+CGG - chr1_3:28779645-28779664 Msa0113090:intron 30.0%
AGTGGTAAAATCTTTGGATA+TGG - chr1_3:28779694-28779713 Msa0113090:intron 30.0%
GTGGTAAAATCTTTGGATAT+GGG - chr1_3:28779695-28779714 Msa0113090:intron 30.0%
AAAAGTAGAGAGAAGTAAGA+AGG - chr1_3:28779724-28779743 Msa0113090:intron 30.0%
ATTGCAAACATCTGATGTTT+CGG - chr1_3:28779747-28779766 Msa0113090:intron 30.0%
GTAGACAAAATGGTATACTA+TGG - chr1_3:28780008-28780027 Msa0113090:intron 30.0%
AAAATGGTATACTATGGTGT+AGG - chr1_3:28780014-28780033 Msa0113090:intron 30.0%
TTTGTGAATGGAATTGTTGA+GGG - chr1_3:28780373-28780392 Msa0113090:intron 30.0%
ACTTGATTCAATCTTTCTTG+CGG + chr1_3:28780401-28780420 None:intergenic 30.0%
TCCCAAAACAATTACACAAA+TGG + chr1_3:28780463-28780482 None:intergenic 30.0%
!!! ATTTGTGTAATTGTTTTGGG+AGG - chr1_3:28780462-28780481 Msa0113090:intron 30.0%
AACACAATATACAGATCATG+TGG + chr1_3:28780518-28780537 None:intergenic 30.0%
TTGTATTCCAAGTGTTAGTT+GGG - chr1_3:28780554-28780573 Msa0113090:intron 30.0%
GTAAACAGAAATTAACCACT+TGG - chr1_3:28780729-28780748 Msa0113090:intron 30.0%
!! TGATAGAAGTTTTATCCACT+GGG + chr1_3:28780816-28780835 None:intergenic 30.0%
!! TTGATAGAAGTTTTATCCAC+TGG + chr1_3:28780817-28780836 None:intergenic 30.0%
GTGGATAAAACTTCTATCAA+AGG - chr1_3:28780817-28780836 Msa0113090:intron 30.0%
GACGTTTCTATTTCAAATGT+TGG - chr1_3:28780963-28780982 Msa0113090:intron 30.0%
!!! CAGAAAAGGTCATTTTTCTT+AGG + chr1_3:28781096-28781115 None:intergenic 30.0%
AATCTCATTGTTATCATCAC+AGG + chr1_3:28781121-28781140 None:intergenic 30.0%
! TTTTGCTCTCATAAATGTGA+TGG - chr1_3:28781208-28781227 Msa0113090:intron 30.0%
CCTGCTTGATAAATTTAATG+AGG + chr1_3:28781252-28781271 None:intergenic 30.0%
CCTCATTAAATTTATCAAGC+AGG - chr1_3:28781249-28781268 Msa0113090:intron 30.0%
ATTAAATTTATCAAGCAGGG+AGG - chr1_3:28781253-28781272 Msa0113090:intron 30.0%
GGATACAAATGGAGATTATT+TGG - chr1_3:28781534-28781553 Msa0113090:intron 30.0%
ATTCATGAACTTAATTCCAG+TGG - chr1_3:28781610-28781629 Msa0113090:intron 30.0%
CGTTATGTATGAGAAAAGTT+GGG + chr1_3:28781807-28781826 None:intergenic 30.0%
TCGTTATGTATGAGAAAAGT+TGG + chr1_3:28781808-28781827 None:intergenic 30.0%
AACACAAAAGATATGCTCAT+TGG - chr1_3:28782263-28782282 Msa0113090:CDS 30.0%
ACACAAAAGATATGCTCATT+GGG - chr1_3:28782264-28782283 Msa0113090:CDS 30.0%
TCTACTTCAAAGTAAAAGGA+GGG + chr1_3:28782438-28782457 None:intergenic 30.0%
TTCTACTTCAAAGTAAAAGG+AGG + chr1_3:28782439-28782458 None:intergenic 30.0%
GAATAGACTAACATTCTGTT+TGG + chr1_3:28782484-28782503 None:intergenic 30.0%
ATTATAACAGAGACACTAAC+TGG + chr1_3:28782531-28782550 None:intergenic 30.0%
!! TTCACATATTAGCTTGCATT+TGG - chr1_3:28782730-28782749 Msa0113090:intron 30.0%
ATGACAAGTCAGTAAAGATA+TGG - chr1_3:28782991-28783010 Msa0113090:five_prime_UTR 30.0%
AGTAATCTACATCAACAACT+TGG + chr1_3:28783143-28783162 None:intergenic 30.0%
!! AAAACCTTTTCGGGGAATTA+GGG + chr1_3:28766324-28766343 None:intergenic 35.0%
!! AAAAACCTTTTCGGGGAATT+AGG + chr1_3:28766325-28766344 None:intergenic 35.0%
! TCAGGAAGAAAAACCTTTTC+GGG + chr1_3:28766333-28766352 None:intergenic 35.0%
! AAAGGTTTTTCTTCCTGATC+GGG - chr1_3:28766335-28766354 Msa0113090:three_prime_UTR 35.0%
ATGGATCAAAACACTGCATT+GGG + chr1_3:28766411-28766430 None:intergenic 35.0%
!! GTTTTGATCCATCTGTTTTG+AGG - chr1_3:28766419-28766438 Msa0113090:CDS 35.0%
ACAACTAACCTCAAAACAGA+TGG + chr1_3:28766430-28766449 None:intergenic 35.0%
!!! ATCTGTTTTGAGGTTAGTTG+TGG - chr1_3:28766429-28766448 Msa0113090:CDS 35.0%
TTGAACTGAGAACGAAACTA+TGG - chr1_3:28766540-28766559 Msa0113090:intron 35.0%
GCTAAGTCATTTATGACAGA+AGG - chr1_3:28766725-28766744 Msa0113090:intron 35.0%
TAATGCTGCAGCATATTTAG+AGG - chr1_3:28766936-28766955 Msa0113090:intron 35.0%
AAAGCTAAATGAAGAGATGG+GGG + chr1_3:28766965-28766984 None:intergenic 35.0%
!! TGTTTTTGTTTGTGAAGTGC+AGG - chr1_3:28767017-28767036 Msa0113090:intron 35.0%
TCTGTAGTGATAGCATTTAG+AGG + chr1_3:28767153-28767172 None:intergenic 35.0%
CTAAATGCTATCACTACAGA+AGG - chr1_3:28767153-28767172 Msa0113090:intron 35.0%
TTTGGCTGCAAAAATGTATG+AGG - chr1_3:28767203-28767222 Msa0113090:intron 35.0%
CTGCAAAAATGTATGAGGAT+CGG - chr1_3:28767208-28767227 Msa0113090:intron 35.0%
GATGAAAAACTCTAACCCTA+TGG - chr1_3:28767230-28767249 Msa0113090:intron 35.0%
ATGATGTCTCTGTATCCATA+GGG + chr1_3:28767248-28767267 None:intergenic 35.0%
TCTAGCATCTAAAAGTGGTT+GGG + chr1_3:28767271-28767290 None:intergenic 35.0%
TTCTAGCATCTAAAAGTGGT+TGG + chr1_3:28767272-28767291 None:intergenic 35.0%
!! ACCACTTTTAGATGCTAGAA+TGG - chr1_3:28767272-28767291 Msa0113090:intron 35.0%
AAGCAACAGAAACACATACA+GGG + chr1_3:28767482-28767501 None:intergenic 35.0%
AAAGGAAGGAAAGAAGTGAA+TGG + chr1_3:28767516-28767535 None:intergenic 35.0%
! CATCTCTAAATTTTCCTCCT+CGG - chr1_3:28767566-28767585 Msa0113090:intron 35.0%
CTGTGGATCCTTCAATTTAT+GGG - chr1_3:28767638-28767657 Msa0113090:intron 35.0%
AAATGCAGGTTAGAACTACT+GGG - chr1_3:28767693-28767712 Msa0113090:CDS 35.0%
!! CTGCATGTTCATTTTTCATG+AGG - chr1_3:28767837-28767856 Msa0113090:CDS 35.0%
CCCTGATTTAATCCTGATAT+AGG + chr1_3:28767965-28767984 None:intergenic 35.0%
GTACATGCACAAGGAAATAT+TGG - chr1_3:28768218-28768237 Msa0113090:CDS 35.0%
ATTGGCAATTCACAAGTGTA+TGG - chr1_3:28768236-28768255 Msa0113090:CDS 35.0%
TTCACAAGTGTATGGAGATA+TGG - chr1_3:28768244-28768263 Msa0113090:CDS 35.0%
ATTGATCCATCGTTTGCAAT+TGG + chr1_3:28768326-28768345 None:intergenic 35.0%
ATTGCAAACGATGGATCAAT+AGG - chr1_3:28768326-28768345 Msa0113090:CDS 35.0%
CACAAAATCATTCAATGCTC+GGG + chr1_3:28768493-28768512 None:intergenic 35.0%
CCACAAAATCATTCAATGCT+CGG + chr1_3:28768494-28768513 None:intergenic 35.0%
! ATGATTTTGTGGATGATCCA+TGG - chr1_3:28768502-28768521 Msa0113090:intron 35.0%
! TGATTTTGTGGATGATCCAT+GGG - chr1_3:28768503-28768522 Msa0113090:intron 35.0%
GTGAAAGAATAGTCAAGTAG+GGG + chr1_3:28768556-28768575 None:intergenic 35.0%
GGTGAAAGAATAGTCAAGTA+GGG + chr1_3:28768557-28768576 None:intergenic 35.0%
TAGTCAATCTAAATTGCCAC+CGG + chr1_3:28768918-28768937 None:intergenic 35.0%
AAACTATTATTCAGAGACGG+AGG - chr1_3:28768955-28768974 Msa0113090:intron 35.0%
AACTATTATTCAGAGACGGA+GGG - chr1_3:28768956-28768975 Msa0113090:intron 35.0%
GTGAAACGGTAGTTAACTAT+CGG + chr1_3:28769380-28769399 None:intergenic 35.0%
!! CAAGCATGTATGTAATGGAT+TGG + chr1_3:28769492-28769511 None:intergenic 35.0%
GTAGTTTCCTAGGGAAAAAA+AGG - chr1_3:28769650-28769669 Msa0113090:intron 35.0%
TAACCATCGTTTACCATTAG+AGG - chr1_3:28769738-28769757 Msa0113090:intron 35.0%
TTACCTCTAATGGTAAACGA+TGG + chr1_3:28769744-28769763 None:intergenic 35.0%
GAAGATGTAATACACACTAC+AGG - chr1_3:28769875-28769894 Msa0113090:intron 35.0%
TAAGATTAGTGGGAGAGATT+GGG + chr1_3:28769916-28769935 None:intergenic 35.0%
TTAAGATTAGTGGGAGAGAT+TGG + chr1_3:28769917-28769936 None:intergenic 35.0%
GGGTAGAAGTTAAGATTAGT+GGG + chr1_3:28769926-28769945 None:intergenic 35.0%
CAAGGAGGAATAAATAGAAG+GGG + chr1_3:28769946-28769965 None:intergenic 35.0%
GCAAGGAGGAATAAATAGAA+GGG + chr1_3:28769947-28769966 None:intergenic 35.0%
AGCAAGGAGGAATAAATAGA+AGG + chr1_3:28769948-28769967 None:intergenic 35.0%
GTTAGGAGTCAAGAATGTTA+GGG + chr1_3:28769984-28770003 None:intergenic 35.0%
! GGTTAGTTAGTTAGATGGTT+AGG + chr1_3:28770001-28770020 None:intergenic 35.0%
! CAGTTGGTTAGTTAGTTAGA+TGG + chr1_3:28770006-28770025 None:intergenic 35.0%
CTAACTAACTAACCAACTGT+TGG - chr1_3:28770007-28770026 Msa0113090:intron 35.0%
AAGACTGAATTTCCAACAGT+TGG + chr1_3:28770022-28770041 None:intergenic 35.0%
TGGAAATTCAGTCTTCATTG+CGG - chr1_3:28770027-28770046 Msa0113090:intron 35.0%
!! GTCGAACCCAAATTTTAAGA+GGG - chr1_3:28770235-28770254 Msa0113090:intron 35.0%
GGATAGCCCTCTTAAAATTT+GGG + chr1_3:28770244-28770263 None:intergenic 35.0%
AGGATAGCCCTCTTAAAATT+TGG + chr1_3:28770245-28770264 None:intergenic 35.0%
TGGAAATTCTGCCTTAATTG+TGG - chr1_3:28770335-28770354 Msa0113090:intron 35.0%
TTTCATTGTGTTAGGTGTGA+AGG - chr1_3:28770416-28770435 Msa0113090:intron 35.0%
TTCATTGTGTTAGGTGTGAA+GGG - chr1_3:28770417-28770436 Msa0113090:intron 35.0%
ATTACACAGACCATATCTCT+AGG + chr1_3:28770463-28770482 None:intergenic 35.0%
!! AAAATCGGCTTGTAAAGTGA+AGG + chr1_3:28770505-28770524 None:intergenic 35.0%
!! CTTTACAAGCCGATTTTGTA+AGG - chr1_3:28770508-28770527 Msa0113090:intron 35.0%
CTAGCTCAACCTTACAAAAT+CGG + chr1_3:28770520-28770539 None:intergenic 35.0%
!! GTTGGTCTTAAAATTTGGGT+TGG + chr1_3:28770545-28770564 None:intergenic 35.0%
!! GTCAACATCTGTTTGCTTTT+TGG + chr1_3:28770643-28770662 None:intergenic 35.0%
!!! GTGAAAGGGTATTTTACACA+TGG + chr1_3:28770829-28770848 None:intergenic 35.0%
ATGGAGAAGAGTAATAGTTC+GGG + chr1_3:28770991-28771010 None:intergenic 35.0%
GATGGAGAAGAGTAATAGTT+CGG + chr1_3:28770992-28771011 None:intergenic 35.0%
AATACTGTTTCGGCATTGTA+GGG + chr1_3:28771423-28771442 None:intergenic 35.0%
AAATACTGTTTCGGCATTGT+AGG + chr1_3:28771424-28771443 None:intergenic 35.0%
! ACAATGCCGAAACAGTATTT+TGG - chr1_3:28771424-28771443 Msa0113090:intron 35.0%
!! GGATAAATTGTTCTGGGTTT+TGG - chr1_3:28771659-28771678 Msa0113090:intron 35.0%
ACATCTGAAAATCGTGCTTA+AGG - chr1_3:28772233-28772252 Msa0113090:intron 35.0%
TCGTGGTTAATTATGTTCAG+TGG - chr1_3:28772266-28772285 Msa0113090:intron 35.0%
CGTGGTTAATTATGTTCAGT+GGG - chr1_3:28772267-28772286 Msa0113090:intron 35.0%
GTGGTTAATTATGTTCAGTG+GGG - chr1_3:28772268-28772287 Msa0113090:intron 35.0%
TTAATTATGTTCAGTGGGGA+TGG - chr1_3:28772272-28772291 Msa0113090:intron 35.0%
CAGCTAAACTGACAACAATT+TGG + chr1_3:28772387-28772406 None:intergenic 35.0%
GTGTAAGAAAATCACGCAAA+TGG + chr1_3:28772516-28772535 None:intergenic 35.0%
ATTTCCTGTACCAGTACTAT+TGG + chr1_3:28772611-28772630 None:intergenic 35.0%
TTGACGGTTGAGAATTAGAA+GGG + chr1_3:28772642-28772661 None:intergenic 35.0%
GTATGAATAGATGGAGTTGA+CGG + chr1_3:28772658-28772677 None:intergenic 35.0%
! ATGATGATGTATGGTACTGA+AGG - chr1_3:28772739-28772758 Msa0113090:intron 35.0%
!! ATACAAGTTGATTTACCAGC+TGG + chr1_3:28772792-28772811 None:intergenic 35.0%
!! TTTTGTAACTTGCATTACCC+AGG - chr1_3:28772813-28772832 Msa0113090:intron 35.0%
! TTTGTAACTTGCATTACCCA+GGG - chr1_3:28772814-28772833 Msa0113090:intron 35.0%
ACCACCCTGTATATTAAAGT+AGG - chr1_3:28772966-28772985 Msa0113090:intron 35.0%
TCCTACTTTAATATACAGGG+TGG + chr1_3:28772970-28772989 None:intergenic 35.0%
! TACCCAATGCCTTTCATTTT+TGG - chr1_3:28772999-28773018 Msa0113090:intron 35.0%
CTAACATTACAGATACAAGC+AGG + chr1_3:28773050-28773069 None:intergenic 35.0%
CTGCTTGTATCTGTAATGTT+AGG - chr1_3:28773048-28773067 Msa0113090:intron 35.0%
!! TTGGAACATTTTGGAGATGT+TGG - chr1_3:28773365-28773384 Msa0113090:intron 35.0%
! GTGATGGAAAGGACTTATTT+GGG - chr1_3:28773432-28773451 Msa0113090:intron 35.0%
! ACTTATTTGGGACGTTGAAA+CGG - chr1_3:28773444-28773463 Msa0113090:intron 35.0%
CATGCTACAGATTCTTCAAA+AGG - chr1_3:28773479-28773498 Msa0113090:intron 35.0%
AGTTCTATACGCAAAAGCAA+TGG - chr1_3:28773588-28773607 Msa0113090:intron 35.0%
CAGATTGAATAAGGATAGGA+TGG + chr1_3:28774231-28774250 None:intergenic 35.0%
CATCCTATCCTTATTCAATC+TGG - chr1_3:28774229-28774248 Msa0113090:intron 35.0%
ACACCAGATTGAATAAGGAT+AGG + chr1_3:28774235-28774254 None:intergenic 35.0%
TCCTTATTCAATCTGGTGTT+TGG - chr1_3:28774236-28774255 Msa0113090:intron 35.0%
ACCAAACACCAGATTGAATA+AGG + chr1_3:28774240-28774259 None:intergenic 35.0%
AGGTTACAAATATAGTTCCC+AGG - chr1_3:28774349-28774368 Msa0113090:intron 35.0%
ATATAGTTCCCAGGAATCTA+AGG - chr1_3:28774358-28774377 Msa0113090:intron 35.0%
CAATCACACATTCCTTTGTT+TGG - chr1_3:28774388-28774407 Msa0113090:intron 35.0%
! ACATTCCTTTGTTTGGTAGA+TGG - chr1_3:28774395-28774414 Msa0113090:intron 35.0%
! CATTCCTTTGTTTGGTAGAT+GGG - chr1_3:28774396-28774415 Msa0113090:intron 35.0%
TTATTCCTGTCAAATGAGGA+TGG - chr1_3:28774496-28774515 Msa0113090:intron 35.0%
TATTCCTGTCAAATGAGGAT+GGG - chr1_3:28774497-28774516 Msa0113090:intron 35.0%
TTATACCCCTATTTCACTTG+CGG - chr1_3:28774570-28774589 Msa0113090:intron 35.0%
!! TGCACTGATTGGAATGAAAA+TGG - chr1_3:28774734-28774753 Msa0113090:intron 35.0%
ACATATGTATAATAGAGCGG+TGG + chr1_3:28774819-28774838 None:intergenic 35.0%
!! TTTTTAGTAAATCGGTGCAG+CGG + chr1_3:28774846-28774865 None:intergenic 35.0%
! GATTTTCCCTTCTATATTCC+CGG - chr1_3:28775133-28775152 Msa0113090:intron 35.0%
ACTTTACCGGGAATATAGAA+GGG + chr1_3:28775142-28775161 None:intergenic 35.0%
AACTTTACCGGGAATATAGA+AGG + chr1_3:28775143-28775162 None:intergenic 35.0%
TAAACCACCAAAAACTAAGG+GGG + chr1_3:28775204-28775223 None:intergenic 35.0%
CTAAACCACCAAAAACTAAG+GGG + chr1_3:28775205-28775224 None:intergenic 35.0%
GCTAAACCACCAAAAACTAA+GGG + chr1_3:28775206-28775225 None:intergenic 35.0%
TGCTAAACCACCAAAAACTA+AGG + chr1_3:28775207-28775226 None:intergenic 35.0%
CCTGTTACATAGCATTTCAA+TGG + chr1_3:28775432-28775451 None:intergenic 35.0%
CCATTGAAATGCTATGTAAC+AGG - chr1_3:28775429-28775448 Msa0113090:intron 35.0%
CACTTATTATGTCATGCGTT+TGG + chr1_3:28775694-28775713 None:intergenic 35.0%
CAAATGTCTTGTATAGTGAC+AGG + chr1_3:28775722-28775741 None:intergenic 35.0%
! TATGATTAGGTTGTACTGCT+TGG - chr1_3:28775749-28775768 Msa0113090:CDS 35.0%
!!! GACACTTATTTTGAAACGGA+GGG + chr1_3:28775875-28775894 None:intergenic 35.0%
!!! TGACACTTATTTTGAAACGG+AGG + chr1_3:28775876-28775895 None:intergenic 35.0%
!!! ATGAGTGTCGTTTAAGGTTT+TGG + chr1_3:28776119-28776138 None:intergenic 35.0%
!! TTCACAATGAGTGTCGTTTA+AGG + chr1_3:28776125-28776144 None:intergenic 35.0%
AAACGACACTCATTGTGAAA+CGG - chr1_3:28776126-28776145 Msa0113090:intron 35.0%
ACAGTATATGGTACCAAAGA+AGG + chr1_3:28776207-28776226 None:intergenic 35.0%
ATGTATTGGGTGACAGTATA+TGG + chr1_3:28776219-28776238 None:intergenic 35.0%
CAGCATGAGGAAAAATGTAT+TGG + chr1_3:28776233-28776252 None:intergenic 35.0%
! CACTCGAAAGATTAAGTTGT+CGG - chr1_3:28776302-28776321 Msa0113090:intron 35.0%
! ACTCGAAAGATTAAGTTGTC+GGG - chr1_3:28776303-28776322 Msa0113090:intron 35.0%
! ATATGAGAGGGATGTTTTCT+AGG - chr1_3:28776364-28776383 Msa0113090:intron 35.0%
TATGAGGATTGTGCAGAAAT+AGG - chr1_3:28776400-28776419 Msa0113090:intron 35.0%
!!! ACATGACCATTTTTGAAGCA+TGG - chr1_3:28776434-28776453 Msa0113090:intron 35.0%
CTGTATCCATGCTTCAAAAA+TGG + chr1_3:28776443-28776462 None:intergenic 35.0%
TGGAAACACGCCTATTTATA+GGG + chr1_3:28777375-28777394 None:intergenic 35.0%
TTGGAAACACGCCTATTTAT+AGG + chr1_3:28777374-28777393 None:intergenic 35.0%
TGCTAACGGGAAAAAATGTT+GGG + chr1_3:28776755-28776774 None:intergenic 35.0%
TTGCTAACGGGAAAAAATGT+TGG + chr1_3:28776756-28776775 None:intergenic 35.0%
! ATTGTTGCTGATTGAGCAAA+CGG - chr1_3:28776794-28776813 Msa0113090:CDS 35.0%
!!! CCACATCTGACTTTTTTTGT+TGG + chr1_3:28777235-28777254 None:intergenic 35.0%
CCAACAAAAAAAGTCAGATG+TGG - chr1_3:28777232-28777251 Msa0113090:intron 35.0%
! ATTGTTGCTGATTGAGCAAA+CGG + chr1_3:28776794-28776813 None:intergenic 35.0%
TTGCTAACGGAAAAAAACGT+TGG - chr1_3:28777313-28777332 Msa0113090:intron 35.0%
TGCTAACGGAAAAAAACGTT+GGG - chr1_3:28777314-28777333 Msa0113090:intron 35.0%
TTGGAAACACGCCTATTTAT+AGG - chr1_3:28777374-28777393 Msa0113090:intron 35.0%
TGGAAACACGCCTATTTATA+GGG - chr1_3:28777375-28777394 Msa0113090:intron 35.0%
!! TAACGGATTGGATTTATCTG+AGG + chr1_3:28777563-28777582 None:intergenic 35.0%
!!! TCCAATCCGTTATTTTGAAG+TGG - chr1_3:28777571-28777590 Msa0113090:intron 35.0%
!! TCCACTTCAAAATAACGGAT+TGG + chr1_3:28777575-28777594 None:intergenic 35.0%
!! TAAGGGTTTCGTTTTTACCT+TGG + chr1_3:28777617-28777636 None:intergenic 35.0%
CCTTTGAATCTACTTTGGTA+AGG + chr1_3:28777635-28777654 None:intergenic 35.0%
CCTTACCAAAGTAGATTCAA+AGG - chr1_3:28777632-28777651 Msa0113090:intron 35.0%
ACCAAAGTAGATTCAAAGGA+AGG - chr1_3:28777636-28777655 Msa0113090:intron 35.0%
CCAAAGTAGATTCAAAGGAA+GGG - chr1_3:28777637-28777656 Msa0113090:intron 35.0%
TTTGGTGAGAGCAGAATATA+AGG + chr1_3:28777678-28777697 None:intergenic 35.0%
GTGAGGCCAATATTATTTGA+TGG + chr1_3:28777729-28777748 None:intergenic 35.0%
TGTTTCATAAAAGTTCCACC+AGG + chr1_3:28777786-28777805 None:intergenic 35.0%
! GTGGAACTTTTATGAAACAG+AGG - chr1_3:28777787-28777806 Msa0113090:intron 35.0%
GAATATATTCCATAGGTAGC+TGG - chr1_3:28777838-28777857 Msa0113090:intron 35.0%
GGATACTAGAAGTAAACTTC+TGG + chr1_3:28777994-28778013 None:intergenic 35.0%
GTTTACTTCTAGTATCCGTA+TGG - chr1_3:28777997-28778016 Msa0113090:intron 35.0%
TTCTAGTATCCGTATGGTAT+GGG - chr1_3:28778003-28778022 Msa0113090:intron 35.0%
! ATTTTTCTCCCCATACCATA+CGG + chr1_3:28778015-28778034 None:intergenic 35.0%
TATGGTATGGGGAGAAAAAT+TGG - chr1_3:28778015-28778034 Msa0113090:intron 35.0%
TTATCCTATCCCTTGTCATT+AGG - chr1_3:28778147-28778166 Msa0113090:intron 35.0%
CAAAGAACAACCTAATGACA+AGG + chr1_3:28778160-28778179 None:intergenic 35.0%
! CTTGTCATTAGGTTGTTCTT+TGG - chr1_3:28778158-28778177 Msa0113090:intron 35.0%
!! TTAGGTTGTTCTTTGGAACA+TGG - chr1_3:28778165-28778184 Msa0113090:intron 35.0%
ATAATAACAGTGTGTTCCTC+TGG + chr1_3:28778214-28778233 None:intergenic 35.0%
! CTTGTCTTTTCCTGTGTATA+CGG - chr1_3:28778366-28778385 Msa0113090:intron 35.0%
! TTGTCTTTTCCTGTGTATAC+GGG - chr1_3:28778367-28778386 Msa0113090:intron 35.0%
TGTTATAATCCCGTATACAC+AGG + chr1_3:28778379-28778398 None:intergenic 35.0%
! ATTCAATTTTCTCTTCCCCA+TGG - chr1_3:28778417-28778436 Msa0113090:intron 35.0%
! TTCAATTTTCTCTTCCCCAT+GGG - chr1_3:28778418-28778437 Msa0113090:intron 35.0%
GTAAACTTATAATCCCCATG+GGG + chr1_3:28778435-28778454 None:intergenic 35.0%
AGTATACCTGTCTTATGTTG+TGG - chr1_3:28778496-28778515 Msa0113090:intron 35.0%
GTATACCTGTCTTATGTTGT+GGG - chr1_3:28778497-28778516 Msa0113090:intron 35.0%
AATGAATGCCAGTATTGTCT+AGG - chr1_3:28778613-28778632 Msa0113090:intron 35.0%
TCATGCAATTCACCCTTATT+TGG - chr1_3:28778884-28778903 Msa0113090:intron 35.0%
CCAACTCAAAAGCCAAATAA+GGG + chr1_3:28778899-28778918 None:intergenic 35.0%
ACCAACTCAAAAGCCAAATA+AGG + chr1_3:28778900-28778919 None:intergenic 35.0%
TAAAGGTTTCTGAATCTGGT+AGG - chr1_3:28778925-28778944 Msa0113090:intron 35.0%
! TCCCAATAAAGTGTTTGAGT+AGG - chr1_3:28778967-28778986 Msa0113090:intron 35.0%
CCCTACTCAAACACTTTATT+GGG + chr1_3:28778971-28778990 None:intergenic 35.0%
! CCCAATAAAGTGTTTGAGTA+GGG - chr1_3:28778968-28778987 Msa0113090:intron 35.0%
TCCCTACTCAAACACTTTAT+TGG + chr1_3:28778972-28778991 None:intergenic 35.0%
CGTTAATGAGCAATAGTTGT+AGG - chr1_3:28779105-28779124 Msa0113090:intron 35.0%
AATAGTTGTAGGTTTACCGA+GGG - chr1_3:28779116-28779135 Msa0113090:intron 35.0%
TATTACAGAAGGAAATCCCT+CGG + chr1_3:28779135-28779154 None:intergenic 35.0%
AGCATGTTGGAACAATTGAT+AGG + chr1_3:28779207-28779226 None:intergenic 35.0%
TATCAATTGTTCCAACATGC+TGG - chr1_3:28779206-28779225 Msa0113090:intron 35.0%
ATTATGGGAATGTTTCCCTT+TGG - chr1_3:28779296-28779315 Msa0113090:intron 35.0%
TTATGGGAATGTTTCCCTTT+GGG - chr1_3:28779297-28779316 Msa0113090:intron 35.0%
AAAACTAATGCATAAGGTCC+AGG - chr1_3:28779547-28779566 Msa0113090:intron 35.0%
GATACATTCCCATCAAATAG+TGG - chr1_3:28779676-28779695 Msa0113090:intron 35.0%
TCGAAGATAGGTAGACAAAA+TGG - chr1_3:28779998-28780017 Msa0113090:intron 35.0%
GTTTGTGAATGGAATTGTTG+AGG - chr1_3:28780372-28780391 Msa0113090:intron 35.0%
CAAAACGTACAACATCTTTC+TGG + chr1_3:28780430-28780449 None:intergenic 35.0%
!! TCATGGGTTTGGTGTTAAAA+TGG - chr1_3:28780490-28780509 Msa0113090:intron 35.0%
!! TCTGTATATTGTGTTGACTC+CGG - chr1_3:28780523-28780542 Msa0113090:intron 35.0%
CTTGTATTCCAAGTGTTAGT+TGG - chr1_3:28780553-28780572 Msa0113090:intron 35.0%
AGGAAGAACTCAATAATTGC+AGG - chr1_3:28780608-28780627 Msa0113090:intron 35.0%
AAAGTTATGATGGCACAGAT+TGG - chr1_3:28780635-28780654 Msa0113090:intron 35.0%
AAGTTATGATGGCACAGATT+GGG - chr1_3:28780636-28780655 Msa0113090:intron 35.0%
AACAGAAATTAACCACTTGG+TGG - chr1_3:28780732-28780751 Msa0113090:intron 35.0%
!! GATAGAAGTTTTATCCACTG+GGG + chr1_3:28780815-28780834 None:intergenic 35.0%
AAACGTCATACTATTGTCCA+AGG + chr1_3:28780950-28780969 None:intergenic 35.0%
!! AATGTTGGTTTGCTTAAAGC+TGG - chr1_3:28780978-28780997 Msa0113090:intron 35.0%
CTGCAAAAGTAATAAGCCAA+AGG + chr1_3:28781010-28781029 None:intergenic 35.0%
TTTCTTAGGGTGGAAATCAA+GGG + chr1_3:28781082-28781101 None:intergenic 35.0%
! TTTTCTTAGGGTGGAAATCA+AGG + chr1_3:28781083-28781102 None:intergenic 35.0%
!!! AAAGGTCATTTTTCTTAGGG+TGG + chr1_3:28781092-28781111 None:intergenic 35.0%
TATCATCACAGGAACAGAAA+AGG + chr1_3:28781110-28781129 None:intergenic 35.0%
ATAACAATGAGATTCGCTTC+TGG - chr1_3:28781127-28781146 Msa0113090:CDS 35.0%
ACTCATTACAGGTGTAAACA+AGG - chr1_3:28781377-28781396 Msa0113090:CDS 35.0%
GTCAAGAATCTGTCAAAGTT+TGG - chr1_3:28781566-28781585 Msa0113090:intron 35.0%
AGAATGAAACATGTTTCCAC+TGG + chr1_3:28781629-28781648 None:intergenic 35.0%
ACCTAACAGTTAGTAGAGTT+AGG - chr1_3:28781771-28781790 Msa0113090:CDS 35.0%
CCTAACAGTTAGTAGAGTTA+GGG - chr1_3:28781772-28781791 Msa0113090:CDS 35.0%
TATCAATTGAGCACATGACT+TGG - chr1_3:28782131-28782150 Msa0113090:CDS 35.0%
AAATAAGCAGTCATTTGCAG+GGG + chr1_3:28782649-28782668 None:intergenic 35.0%
GAAATAAGCAGTCATTTGCA+GGG + chr1_3:28782650-28782669 None:intergenic 35.0%
AGAAATAAGCAGTCATTTGC+AGG + chr1_3:28782651-28782670 None:intergenic 35.0%
AGTCGTAAAGGAATATAGAC+TGG - chr1_3:28782695-28782714 Msa0113090:CDS 35.0%
! CATTGATGACTTACAGTCTT+TGG - chr1_3:28782860-28782879 Msa0113090:intron 35.0%
! TGTTAACTGAGAGCACGAAT+CGG - chr1_3:28766225-28766244 Msa0113090:three_prime_UTR 40.0%
CTTTCAAACACTGTCATGTG+AGG + chr1_3:28766270-28766289 None:intergenic 40.0%
! CAGGAAGAAAAACCTTTTCG+GGG + chr1_3:28766332-28766351 None:intergenic 40.0%
ACAGAATACAATTCCCGATC+AGG + chr1_3:28766351-28766370 None:intergenic 40.0%
GGAATTGTATTCTGTGATCG+TGG - chr1_3:28766356-28766375 Msa0113090:exon 40.0%
ATCAAAACACTGCATTGGGA+TGG + chr1_3:28766407-28766426 None:intergenic 40.0%
GATGGATCAAAACACTGCAT+TGG + chr1_3:28766412-28766431 None:intergenic 40.0%
AAACTATGGCGCAGAGTAAT+TGG - chr1_3:28766554-28766573 Msa0113090:intron 40.0%
AACTATGGCGCAGAGTAATT+GGG - chr1_3:28766555-28766574 Msa0113090:intron 40.0%
GTCATTTATGACAGAAGGGA+AGG - chr1_3:28766730-28766749 Msa0113090:intron 40.0%
AGAATGTTTCTCGTTTGTCC+TGG + chr1_3:28766914-28766933 None:intergenic 40.0%
AAGCTAAATGAAGAGATGGG+GGG + chr1_3:28766964-28766983 None:intergenic 40.0%
TTTAGAGGAGGAGTTCCAAT+GGG + chr1_3:28767138-28767157 None:intergenic 40.0%
ATTTAGAGGAGGAGTTCCAA+TGG + chr1_3:28767139-28767158 None:intergenic 40.0%
GTAGTGATAGCATTTAGAGG+AGG + chr1_3:28767150-28767169 None:intergenic 40.0%
ATCACTACAGAAGGAATGCT+AGG - chr1_3:28767162-28767181 Msa0113090:intron 40.0%
TCACTACAGAAGGAATGCTA+GGG - chr1_3:28767163-28767182 Msa0113090:intron 40.0%
GATGATGTCTCTGTATCCAT+AGG + chr1_3:28767249-28767268 None:intergenic 40.0%
GCCATTCTAGCATCTAAAAG+TGG + chr1_3:28767276-28767295 None:intergenic 40.0%
TTGGGCAAAAGGCAGAAAAA+TGG + chr1_3:28767383-28767402 None:intergenic 40.0%
CTTGAACCATCTGACTGTTT+GGG + chr1_3:28767401-28767420 None:intergenic 40.0%
AGCAACAGAAACACATACAG+GGG + chr1_3:28767481-28767500 None:intergenic 40.0%
CAAGCAACAGAAACACATAC+AGG + chr1_3:28767483-28767502 None:intergenic 40.0%
TATAGTGTACGGAGAAAGGA+AGG + chr1_3:28767530-28767549 None:intergenic 40.0%
AATTGAAGGATCCACAGGTA+AGG + chr1_3:28767635-28767654 None:intergenic 40.0%
CCATAAATTGAAGGATCCAC+AGG + chr1_3:28767640-28767659 None:intergenic 40.0%
CCTGTGGATCCTTCAATTTA+TGG - chr1_3:28767637-28767656 Msa0113090:intron 40.0%
GATCCTTCAATTTATGGGCA+GGG - chr1_3:28767643-28767662 Msa0113090:intron 40.0%
! AAGTCTGGAATCACAAATGC+AGG - chr1_3:28767679-28767698 Msa0113090:intron 40.0%
CAAATGCAGGTTAGAACTAC+TGG - chr1_3:28767692-28767711 Msa0113090:CDS 40.0%
AATGCAGGTTAGAACTACTG+GGG - chr1_3:28767694-28767713 Msa0113090:CDS 40.0%
TCAGGATTAAATCAGGGAGT+TGG - chr1_3:28767968-28767987 Msa0113090:intron 40.0%
!! GAAACTGATTTGCACTCTGA+AGG + chr1_3:28768157-28768176 None:intergenic 40.0%
ATGGATCCACAACGATTAAG+AGG - chr1_3:28768263-28768282 Msa0113090:CDS 40.0%
GCTAATCCTCTTAATCGTTG+TGG + chr1_3:28768272-28768291 None:intergenic 40.0%
!! CGATTAAGAGGATTAGCTAG+AGG - chr1_3:28768275-28768294 Msa0113090:CDS 40.0%
!! TTAAGAGGATTAGCTAGAGG+AGG - chr1_3:28768278-28768297 Msa0113090:CDS 40.0%
GGAGGTTTGAATGTGAAAGA+CGG - chr1_3:28768296-28768315 Msa0113090:CDS 40.0%
TATCAAGTTCATGCACCATG+AGG + chr1_3:28768409-28768428 None:intergenic 40.0%
!!! CCGAGCATTGAATGATTTTG+TGG - chr1_3:28768491-28768510 Msa0113090:intron 40.0%
GGGTGAAAGAATAGTCAAGT+AGG + chr1_3:28768558-28768577 None:intergenic 40.0%
! TTATCTGAAGGCATGTTGAG+AGG + chr1_3:28768622-28768641 None:intergenic 40.0%
!! TTAGGTTGGTCTGGTAGTAT+TGG - chr1_3:28768843-28768862 Msa0113090:intron 40.0%
CGCGCAAACAAAGTTAATGA+CGG - chr1_3:28769271-28769290 Msa0113090:intron 40.0%
AAACGGTAGTTAACTATCGG+CGG + chr1_3:28769377-28769396 None:intergenic 40.0%
GGGGTAGAAGTTAAGATTAG+TGG + chr1_3:28769927-28769946 None:intergenic 40.0%
ATGTGATGCAATAAGCAAGG+AGG + chr1_3:28769961-28769980 None:intergenic 40.0%
GGTTAGGAGTCAAGAATGTT+AGG + chr1_3:28769985-28770004 None:intergenic 40.0%
ACACAACACAATGAAGGAGT+TGG + chr1_3:28770107-28770126 None:intergenic 40.0%
CTTCACACACAACACAATGA+AGG + chr1_3:28770113-28770132 None:intergenic 40.0%
ATTGTGTTGTGTGTGAAGTG+TGG - chr1_3:28770115-28770134 Msa0113090:intron 40.0%
TCCCACATTTCCTAGAGATA+TGG - chr1_3:28770144-28770163 Msa0113090:intron 40.0%
! GCCATATCTCTAGGAAATGT+GGG + chr1_3:28770148-28770167 None:intergenic 40.0%
! TGCCATATCTCTAGGAAATG+TGG + chr1_3:28770149-28770168 None:intergenic 40.0%
ACTACACATGCCATATCTCT+AGG + chr1_3:28770157-28770176 None:intergenic 40.0%
!! CTTACAAAAACCGGCTTGTA+AGG + chr1_3:28770205-28770224 None:intergenic 40.0%
!! CTTACAAGCCGGTTTTTGTA+AGG - chr1_3:28770203-28770222 Msa0113090:intron 40.0%
! GGTCGAACCCAAATTTTAAG+AGG - chr1_3:28770234-28770253 Msa0113090:intron 40.0%
GCTATCCTAGATCTGTTGTA+GGG - chr1_3:28770257-28770276 Msa0113090:intron 40.0%
! AGTGTTTGAGGTTGCAATGA+TGG + chr1_3:28770397-28770416 None:intergenic 40.0%
TCATTGTGTTAGGTGTGAAG+GGG - chr1_3:28770418-28770437 Msa0113090:intron 40.0%
ACCATATCTCTAGGCAATGT+GGG + chr1_3:28770454-28770473 None:intergenic 40.0%
! CGATTTTGTAAGGTTGAGCT+AGG - chr1_3:28770518-28770537 Msa0113090:intron 40.0%
TAACAAAAGGGCTATCTGAG+AGG - chr1_3:28770573-28770592 Msa0113090:intron 40.0%
! GCATCGTGTCTTACTGTTTT+TGG + chr1_3:28770717-28770736 None:intergenic 40.0%
TGTGTTTGTGGCTGTGTATT+TGG + chr1_3:28771019-28771038 None:intergenic 40.0%
CGATGAAGAAGTTGTGTTTG+TGG + chr1_3:28771031-28771050 None:intergenic 40.0%
TGATGAATGAGAAGAGGAGA+TGG + chr1_3:28771070-28771089 None:intergenic 40.0%
AGGAGATGATGAATGAGAAG+AGG + chr1_3:28771076-28771095 None:intergenic 40.0%
GAAGAGAGGAGATCAAAGAT+GGG + chr1_3:28771109-28771128 None:intergenic 40.0%
TGAAGAGAGGAGATCAAAGA+TGG + chr1_3:28771110-28771129 None:intergenic 40.0%
TGCAATCAAGAGATGAAGAG+AGG + chr1_3:28771123-28771142 None:intergenic 40.0%
!! GCTTTAGAGGCTTAAAGTGT+TGG - chr1_3:28771214-28771233 Msa0113090:intron 40.0%
CAAAGGATCATGTTGTTGCT+GGG + chr1_3:28771885-28771904 None:intergenic 40.0%
AGTTAATTGTGTTACGTGGG+CGG + chr1_3:28772087-28772106 None:intergenic 40.0%
CTTAAGGACATTCAAAGTCG+TGG - chr1_3:28772249-28772268 Msa0113090:intron 40.0%
! ACGTTTAGTGGATGAATGGA+TGG + chr1_3:28772332-28772351 None:intergenic 40.0%
! ATGTAGGCCCTTTCCTTTTT+CGG + chr1_3:28772576-28772595 None:intergenic 40.0%
ACTGGTACAGGAAATACACT+TGG - chr1_3:28772616-28772635 Msa0113090:intron 40.0%
GTTGACGGTTGAGAATTAGA+AGG + chr1_3:28772643-28772662 None:intergenic 40.0%
ACTCCATCTATTCATACTCC+TGG - chr1_3:28772661-28772680 Msa0113090:intron 40.0%
! TCACCAGGAGTATGAATAGA+TGG + chr1_3:28772667-28772686 None:intergenic 40.0%
TCTATTCATACTCCTGGTGA+TGG - chr1_3:28772667-28772686 Msa0113090:intron 40.0%
AATGTTGCTGGTGTATCCAA+GGG - chr1_3:28772715-28772734 Msa0113090:intron 40.0%
! TCCAAGGGTATGATGATGTA+TGG - chr1_3:28772730-28772749 Msa0113090:intron 40.0%
ACCATACATCATCATACCCT+TGG + chr1_3:28772734-28772753 None:intergenic 40.0%
!! TTGATTTACCAGCTGGTTTG+TGG + chr1_3:28772785-28772804 None:intergenic 40.0%
! TGGCTCCTTAGATGATAATG+TGG - chr1_3:28773385-28773404 Msa0113090:intron 40.0%
TGTGGAATCATTTCTCTCAC+AGG - chr1_3:28773403-28773422 Msa0113090:intron 40.0%
TCATTTCTCTCACAGGATGA+TGG - chr1_3:28773410-28773429 Msa0113090:intron 40.0%
!! GGTGATGGAAAGGACTTATT+TGG - chr1_3:28773431-28773450 Msa0113090:intron 40.0%
TGAAGAATCTGTAGCATGCT+CGG + chr1_3:28773477-28773496 None:intergenic 40.0%
TGACTGTATAGGTCCATTTC+AGG - chr1_3:28773546-28773565 Msa0113090:intron 40.0%
ACTGAAGGAAAAGCCTGAAA+TGG + chr1_3:28773562-28773581 None:intergenic 40.0%
! TGCTGTCATTTCTCTTCAGA+TGG - chr1_3:28773621-28773640 Msa0113090:intron 40.0%
! GCTGTCATTTCTCTTCAGAT+GGG - chr1_3:28773622-28773641 Msa0113090:intron 40.0%
TCCTTATCATGTGCACCAAT+CGG + chr1_3:28774191-28774210 None:intergenic 40.0%
GATTCCAACCTTAGATTCCT+GGG + chr1_3:28774369-28774388 None:intergenic 40.0%
TGATTCCAACCTTAGATTCC+TGG + chr1_3:28774370-28774389 None:intergenic 40.0%
GGAACCAGAAAAATATGCCA+AGG - chr1_3:28774417-28774436 Msa0113090:intron 40.0%
CCTGGGCATAATTTATTCCT+TGG + chr1_3:28774437-28774456 None:intergenic 40.0%
CCAAGGAATAAATTATGCCC+AGG - chr1_3:28774434-28774453 Msa0113090:intron 40.0%
AATAAAACAGGGCAGAACGT+GGG + chr1_3:28774481-28774500 None:intergenic 40.0%
TTTACCCATCCTCATTTGAC+AGG + chr1_3:28774504-28774523 None:intergenic 40.0%
GATGGGTAAATCATATTCCC+AGG - chr1_3:28774514-28774533 Msa0113090:intron 40.0%
!! GCAATCAATTGGTTCGAAGT+AGG + chr1_3:28774640-28774659 None:intergenic 40.0%
TTCTACATTATCCCAGGAAC+AGG - chr1_3:28775111-28775130 Msa0113090:intron 40.0%
AAAGTTCTGCTATGTAGCAG+AGG - chr1_3:28775377-28775396 Msa0113090:intron 40.0%
CAGGTTCTGCTATCATCATT+TGG - chr1_3:28775448-28775467 Msa0113090:intron 40.0%
TGATTCCATCTTAACAGGCA+TGG - chr1_3:28775776-28775795 Msa0113090:CDS 40.0%
GATTCCATCTTAACAGGCAT+GGG - chr1_3:28775777-28775796 Msa0113090:CDS 40.0%
!!! ATTTTGAAACGGAGGGAGTA+TGG + chr1_3:28775868-28775887 None:intergenic 40.0%
TGAACTAAAGACCAAAACCC+TGG - chr1_3:28776166-28776185 Msa0113090:intron 40.0%
GAACTAAAGACCAAAACCCT+GGG - chr1_3:28776167-28776186 Msa0113090:intron 40.0%
ATCTCGTGTCTATCCTTCTT+TGG - chr1_3:28776191-28776210 Msa0113090:intron 40.0%
ACAGAGGCTATATGACTATG+TGG + chr1_3:28776264-28776283 None:intergenic 40.0%
! AAGATTAAGTTGTCGGGTCA+AGG - chr1_3:28776309-28776328 Msa0113090:intron 40.0%
GCTAACGGGAAAAAATGTTG+GGG + chr1_3:28776754-28776773 None:intergenic 40.0%
ATCAGCAACAATTAACAGCG+AGG + chr1_3:28777283-28777302 None:intergenic 40.0%
ATCAGCAACAATTAACAGCG+AGG - chr1_3:28777283-28777302 Msa0113090:intron 40.0%
GCTAACGGAAAAAAACGTTG+GGG - chr1_3:28777315-28777334 Msa0113090:intron 40.0%
TGAGCAGAAAACCAAATCCA+AGG - chr1_3:28777597-28777616 Msa0113090:intron 40.0%
CCCTTCCTTTGAATCTACTT+TGG + chr1_3:28777640-28777659 None:intergenic 40.0%
! CAGACATTGGCATGTTTTTC+TGG - chr1_3:28777945-28777964 Msa0113090:intron 40.0%
CTTCTAGTATCCGTATGGTA+TGG - chr1_3:28778002-28778021 Msa0113090:intron 40.0%
TCTAGTATCCGTATGGTATG+GGG - chr1_3:28778004-28778023 Msa0113090:intron 40.0%
ACAACCTAATGACAAGGGAT+AGG + chr1_3:28778154-28778173 None:intergenic 40.0%
CTTCGTTTGATACAACTGTG+CGG - chr1_3:28778278-28778297 Msa0113090:intron 40.0%
ACACAGGAAAAGACAAGGAA+AGG + chr1_3:28778363-28778382 None:intergenic 40.0%
CGTATACACAGGAAAAGACA+AGG + chr1_3:28778368-28778387 None:intergenic 40.0%
! TCAATTTTCTCTTCCCCATG+GGG - chr1_3:28778419-28778438 Msa0113090:intron 40.0%
AGTTAAGGAGTGGAGTGATA+AGG + chr1_3:28778542-28778561 None:intergenic 40.0%
!! ATAAGGTTGGTTTGGTGGTT+GGG + chr1_3:28778572-28778591 None:intergenic 40.0%
!! TATAAGGTTGGTTTGGTGGT+TGG + chr1_3:28778573-28778592 None:intergenic 40.0%
CATTCTTACAGTGATTAGGG+CGG + chr1_3:28778597-28778616 None:intergenic 40.0%
!!! CCCTTATTTGGCTTTTGAGT+TGG - chr1_3:28778896-28778915 Msa0113090:intron 40.0%
GTGTTTGAGTAGGGAACTTA+AGG - chr1_3:28778977-28778996 Msa0113090:intron 40.0%
! ATGAGTGTAGTGGAGGAAAA+TGG - chr1_3:28779037-28779056 Msa0113090:intron 40.0%
! TGTAGTGGAGGAAAATGGTA+AGG - chr1_3:28779042-28779061 Msa0113090:intron 40.0%
! GTAGTGGAGGAAAATGGTAA+GGG - chr1_3:28779043-28779062 Msa0113090:intron 40.0%
CAATAGTTGTAGGTTTACCG+AGG - chr1_3:28779115-28779134 Msa0113090:intron 40.0%
TCCTCAATCTTCGATAACAC+TGG + chr1_3:28779245-28779264 None:intergenic 40.0%
TATCGAAGATTGAGGACATG+TGG - chr1_3:28779249-28779268 Msa0113090:intron 40.0%
ATCGAAGATTGAGGACATGT+GGG - chr1_3:28779250-28779269 Msa0113090:intron 40.0%
GTGCATCAACGGGATATTAT+GGG - chr1_3:28779281-28779300 Msa0113090:intron 40.0%
CAAAAAGCCTTTCAGCTCTA+GGG + chr1_3:28779328-28779347 None:intergenic 40.0%
TCAAAAAGCCTTTCAGCTCT+AGG + chr1_3:28779329-28779348 None:intergenic 40.0%
!! TAGGGTTCTGATTTGGGTAT+GGG + chr1_3:28779870-28779889 None:intergenic 40.0%
AAACAAGTGTAGTTGAGGCA+AGG + chr1_3:28779915-28779934 None:intergenic 40.0%
GAGGTTGAACAGTTCATCAT+GGG - chr1_3:28779948-28779967 Msa0113090:intron 40.0%
ATCTGACAAAGGTCGAAGAT+AGG - chr1_3:28779986-28780005 Msa0113090:intron 40.0%
CCTTTACTTTCTGAGCACAT+GGG + chr1_3:28780080-28780099 None:intergenic 40.0%
ACCTTTACTTTCTGAGCACA+TGG + chr1_3:28780081-28780100 None:intergenic 40.0%
CAGAAAGTAAAGGTCACACA+AGG - chr1_3:28780087-28780106 Msa0113090:intron 40.0%
!! TTACTCTAGAACTCTCACCT+GGG + chr1_3:28780133-28780152 None:intergenic 40.0%
!! TTTACTCTAGAACTCTCACC+TGG + chr1_3:28780134-28780153 None:intergenic 40.0%
ATTCCCACTACAATTCTGAC+TGG - chr1_3:28780218-28780237 Msa0113090:intron 40.0%
TTCCCACTACAATTCTGACT+GGG - chr1_3:28780219-28780238 Msa0113090:intron 40.0%
CGACAATACATACACCACAT+GGG + chr1_3:28780301-28780320 None:intergenic 40.0%
ACGACAATACATACACCACA+TGG + chr1_3:28780302-28780321 None:intergenic 40.0%
!! CACAAACTGTGCTGCTTAAA+GGG + chr1_3:28780359-28780378 None:intergenic 40.0%
!! TCACAAACTGTGCTGCTTAA+AGG + chr1_3:28780360-28780379 None:intergenic 40.0%
TAAGCAGCACAGTTTGTGAA+TGG - chr1_3:28780361-28780380 Msa0113090:intron 40.0%
!!! TGTTTTGGGAGGAAAGTTCA+TGG - chr1_3:28780473-28780492 Msa0113090:intron 40.0%
!!! GTTTTGGGAGGAAAGTTCAT+GGG - chr1_3:28780474-28780493 Msa0113090:intron 40.0%
AGCAAAACCCAACTAACACT+TGG + chr1_3:28780564-28780583 None:intergenic 40.0%
! TTAGTTGGGTTTTGCTTCAG+TGG - chr1_3:28780568-28780587 Msa0113090:intron 40.0%
! TAGTTGGGTTTTGCTTCAGT+GGG - chr1_3:28780569-28780588 Msa0113090:intron 40.0%
TGCAGGCTTGAAAGTTATGA+TGG - chr1_3:28780625-28780644 Msa0113090:intron 40.0%
!! ATTAACCACTTGGTGGTGTA+AGG - chr1_3:28780739-28780758 Msa0113090:intron 40.0%
ATTACAACTTCATACCCCAG+TGG - chr1_3:28780798-28780817 Msa0113090:intron 40.0%
TGCTTATACCTCTTATGCCT+TGG - chr1_3:28780930-28780949 Msa0113090:intron 40.0%
ACTATTGTCCAAGGCATAAG+AGG + chr1_3:28780941-28780960 None:intergenic 40.0%
CTTTCTTTGCAGGCATATAG+CGG - chr1_3:28781036-28781055 Msa0113090:CDS 40.0%
TCTTTGATGTTGAGACTGAC+AGG - chr1_3:28781347-28781366 Msa0113090:intron 40.0%
!! ATGTATTTCTAGGGACACTC+TGG - chr1_3:28781490-28781509 Msa0113090:intron 40.0%
!! TGTATTTCTAGGGACACTCT+GGG - chr1_3:28781491-28781510 Msa0113090:intron 40.0%
TGTGTATGCTGGGATACAAA+TGG - chr1_3:28781523-28781542 Msa0113090:intron 40.0%
TTCATGAATGCAATCACCAG+AGG + chr1_3:28781599-28781618 None:intergenic 40.0%
TACTCCAACCTCTTGGTTAT+CGG - chr1_3:28781667-28781686 Msa0113090:intron 40.0%
TTGATATGTGCAGACATACC+TGG + chr1_3:28781699-28781718 None:intergenic 40.0%
CCCTAACTCTACTAACTGTT+AGG + chr1_3:28781775-28781794 None:intergenic 40.0%
!! GTGGTACTTTTTACTGGCAA+TGG + chr1_3:28782001-28782020 None:intergenic 40.0%
!! GGTATCGTGGTACTTTTTAC+TGG + chr1_3:28782007-28782026 None:intergenic 40.0%
CTATTCACAGTTTGGTATCG+TGG + chr1_3:28782020-28782039 None:intergenic 40.0%
ATATGCTCATTGGGATTCGA+AGG - chr1_3:28782273-28782292 Msa0113090:CDS 40.0%
TATGCTCATTGGGATTCGAA+GGG - chr1_3:28782274-28782293 Msa0113090:CDS 40.0%
TGATGAGACTTACTTCTACC+AGG + chr1_3:28782327-28782346 None:intergenic 40.0%
GGGTTAAGCAACGTAATCAT+TGG + chr1_3:28782603-28782622 None:intergenic 40.0%
!! ACTTACAGTCTTTGGAGCTA+TGG - chr1_3:28782868-28782887 Msa0113090:intron 40.0%
!! CTTTACTGACTTGTCATGAC+TGG + chr1_3:28782988-28783007 None:intergenic 40.0%
! GAAATAAAAAGTGCGACGCT+CGG - chr1_3:28783013-28783032 Msa0113090:five_prime_UTR 40.0%
! AAATAAAAAGTGCGACGCTC+GGG - chr1_3:28783014-28783033 Msa0113090:five_prime_UTR 40.0%
TTCGTGCTCTCAGTTAACAG+AGG + chr1_3:28766224-28766243 None:intergenic 45.0%
TCATGTGAGGAGGAGAATTC+GGG + chr1_3:28766257-28766276 None:intergenic 45.0%
GTCATGTGAGGAGGAGAATT+CGG + chr1_3:28766258-28766277 None:intergenic 45.0%
TCAAACACTGTCATGTGAGG+AGG + chr1_3:28766267-28766286 None:intergenic 45.0%
TGATCGTGGCTGCATTAATC+CGG - chr1_3:28766370-28766389 Msa0113090:exon 45.0%
AAGGTTTCTCCTGATCCAGT+AGG - chr1_3:28766749-28766768 Msa0113090:intron 45.0%
AATGCAGCAATTGATGCTCC+TGG - chr1_3:28766841-28766860 Msa0113090:intron 45.0%
CACTCGAAAAGAAAACCTCC+AGG + chr1_3:28766862-28766881 None:intergenic 45.0%
!! CTGGAGGTTTTCTTTTCGAG+TGG - chr1_3:28766860-28766879 Msa0113090:intron 45.0%
!!! GAGGTTTTCTTTTCGAGTGG+TGG - chr1_3:28766863-28766882 Msa0113090:intron 45.0%
!! TCTGGGACATTTTTATCGCC+AGG - chr1_3:28766893-28766912 Msa0113090:intron 45.0%
CCAAGCTCAGATGCAAAGAA+GGG - chr1_3:28767098-28767117 Msa0113090:intron 45.0%
GATCCTAATCATCCTCCCAT+TGG - chr1_3:28767120-28767139 Msa0113090:intron 45.0%
GTTCCAATGGGAGGATGATT+AGG + chr1_3:28767126-28767145 None:intergenic 45.0%
! CATTTTTGCAGCCAAAGCAG+TGG + chr1_3:28767199-28767218 None:intergenic 45.0%
CATCTGACTGTTTGGGCAAA+AGG + chr1_3:28767394-28767413 None:intergenic 45.0%
! CTTTTGCCCAAACAGTCAGA+TGG - chr1_3:28767392-28767411 Msa0113090:intron 45.0%
CCTTGAACCATCTGACTGTT+TGG + chr1_3:28767402-28767421 None:intergenic 45.0%
CCAAACAGTCAGATGGTTCA+AGG - chr1_3:28767399-28767418 Msa0113090:intron 45.0%
ATCAGCTTTGCAGCAAATGC+AGG - chr1_3:28767440-28767459 Msa0113090:intron 45.0%
! TCTAAATTTTCCTCCTCGGC+AGG - chr1_3:28767570-28767589 Msa0113090:intron 45.0%
! TTTTTGATATCCTGCCGAGG+AGG + chr1_3:28767583-28767602 None:intergenic 45.0%
!! TCGTTTTTGATATCCTGCCG+AGG + chr1_3:28767586-28767605 None:intergenic 45.0%
GGATCCTTCAATTTATGGGC+AGG - chr1_3:28767642-28767661 Msa0113090:intron 45.0%
GGTTAGAACTACTGGGGAAA+AGG - chr1_3:28767700-28767719 Msa0113090:CDS 45.0%
GGATTAAATCAGGGAGTTGG+TGG - chr1_3:28767971-28767990 Msa0113090:intron 45.0%
!! GTTGGTGGTCTCACATTGAA+AGG - chr1_3:28767986-28768005 Msa0113090:intron 45.0%
GTGGTCTCACATTGAAAGGA+TGG - chr1_3:28767990-28768009 Msa0113090:intron 45.0%
! GAACAAATTCGCCCAGGTTT+TGG - chr1_3:28768110-28768129 Msa0113090:intron 45.0%
GAACTTGAGCTCCAAAACCT+GGG + chr1_3:28768124-28768143 None:intergenic 45.0%
TGAACTTGAGCTCCAAAACC+TGG + chr1_3:28768125-28768144 None:intergenic 45.0%
! TGATTTGCACTCTGAAGGAG+AGG + chr1_3:28768152-28768171 None:intergenic 45.0%
! AGCTGCTGTTGTTGTTGTTG+TGG + chr1_3:28768188-28768207 None:intergenic 45.0%
GGTCAACCAATTGCAAACGA+TGG - chr1_3:28768317-28768336 Msa0113090:CDS 45.0%
TTTAGTCAGTGCACCTTGTC+TGG - chr1_3:28768383-28768402 Msa0113090:intron 45.0%
!! TTGGTCTGGTAGTATTGGCT+TGG - chr1_3:28768848-28768867 Msa0113090:intron 45.0%
!! TGGTCTGGTAGTATTGGCTT+GGG - chr1_3:28768849-28768868 Msa0113090:intron 45.0%
! GTCTCAGGTTCGATTTTCTC+CGG - chr1_3:28768896-28768915 Msa0113090:intron 45.0%
GAACGGTACTTAACTACCGT+TGG + chr1_3:28769346-28769365 None:intergenic 45.0%
TATCGGCGGACAAAACTGAA+CGG + chr1_3:28769363-28769382 None:intergenic 45.0%
CCACGGTAGACAACTATAGT+TGG + chr1_3:28769422-28769441 None:intergenic 45.0%
CCAACTATAGTTGTCTACCG+TGG - chr1_3:28769419-28769438 Msa0113090:intron 45.0%
!!! GATGCACCCTTTTTTTCCCT+AGG + chr1_3:28769660-28769679 None:intergenic 45.0%
GGGATGTGATGCAATAAGCA+AGG + chr1_3:28769964-28769983 None:intergenic 45.0%
CAACACAATGAAGGAGTTGG+AGG + chr1_3:28770104-28770123 None:intergenic 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_3:28770199-28770218 None:intergenic 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr1_3:28770200-28770219 None:intergenic 45.0%
GGCTATCCTAGATCTGTTGT+AGG - chr1_3:28770256-28770275 Msa0113090:intron 45.0%
CATTGTGTTAGGTGTGAAGG+GGG - chr1_3:28770419-28770438 Msa0113090:intron 45.0%
TCCCACATTGCCTAGAGATA+TGG - chr1_3:28770450-28770469 Msa0113090:intron 45.0%
GACCATATCTCTAGGCAATG+TGG + chr1_3:28770455-28770474 None:intergenic 45.0%
!! GGCTGTGTATTTGGTTCTGA+TGG + chr1_3:28771010-28771029 None:intergenic 45.0%
! CAAAGATGGGTTCTGCAATC+AGG + chr1_3:28771096-28771115 None:intergenic 45.0%
CAGTGTTTGACAATGAGGGT+AGG + chr1_3:28771467-28771486 None:intergenic 45.0%
GGAGCAGTGTTTGACAATGA+GGG + chr1_3:28771471-28771490 None:intergenic 45.0%
TGGAGCAGTGTTTGACAATG+AGG + chr1_3:28771472-28771491 None:intergenic 45.0%
AATCCTGGTCTAATGCCAAG+AGG + chr1_3:28771507-28771526 None:intergenic 45.0%
TCTTGGCATTAGACCAGGAT+TGG - chr1_3:28771506-28771525 Msa0113090:intron 45.0%
!! GAGATGGATTGTTGCATCTG+TGG + chr1_3:28771863-28771882 None:intergenic 45.0%
ATCATGTTGTTGCTGGGAGA+TGG + chr1_3:28771879-28771898 None:intergenic 45.0%
GCAAAGGATCATGTTGTTGC+TGG + chr1_3:28771886-28771905 None:intergenic 45.0%
TCCTTTGCATTCACAGCAAC+TGG - chr1_3:28771898-28771917 Msa0113090:intron 45.0%
ACCAGTTGCTGTGAATGCAA+AGG + chr1_3:28771902-28771921 None:intergenic 45.0%
GAATGTTGCTGGTGTATCCA+AGG - chr1_3:28772714-28772733 Msa0113090:intron 45.0%
! ATGTATGGTACTGAAGGAGC+AGG - chr1_3:28772745-28772764 Msa0113090:intron 45.0%
AAATAGCCGACCTCACTTAG+TGG - chr1_3:28772875-28772894 Msa0113090:intron 45.0%
AATAGCCGACCTCACTTAGT+GGG - chr1_3:28772876-28772895 Msa0113090:intron 45.0%
CATATCCCACTAAGTGAGGT+CGG + chr1_3:28772884-28772903 None:intergenic 45.0%
AAGCCATATCCCACTAAGTG+AGG + chr1_3:28772888-28772907 None:intergenic 45.0%
!!! GTTTTAGTTGCAGGATGGCT+TGG - chr1_3:28773346-28773365 Msa0113090:intron 45.0%
!! CAGGATGGCTTGGAACATTT+TGG - chr1_3:28773356-28773375 Msa0113090:intron 45.0%
!! ACAGGATGATGGTGATGGAA+AGG - chr1_3:28773421-28773440 Msa0113090:intron 45.0%
GGGAAATTATTAGCCAGTGC+TGG - chr1_3:28773642-28773661 Msa0113090:intron 45.0%
CCTTATCATGTGCACCAATC+GGG + chr1_3:28774190-28774209 None:intergenic 45.0%
GGTGCACATGATAAGGAGAT+AGG - chr1_3:28774194-28774213 Msa0113090:intron 45.0%
!! CTGGTGTTTGGTGCATCAAT+AGG - chr1_3:28774248-28774267 Msa0113090:intron 45.0%
CTTCAAACAAACACCCCCTA+AGG + chr1_3:28774331-28774350 None:intergenic 45.0%
!! CTTAGGGGGTGTTTGTTTGA+AGG - chr1_3:28774329-28774348 Msa0113090:intron 45.0%
! AGTTCCCAGGAATCTAAGGT+TGG - chr1_3:28774362-28774381 Msa0113090:intron 45.0%
GGTTCCCATCTACCAAACAA+AGG + chr1_3:28774403-28774422 None:intergenic 45.0%
GAATAAAACAGGGCAGAACG+TGG + chr1_3:28774482-28774501 None:intergenic 45.0%
AAAGTGGGGTTCTCAATCCT+GGG + chr1_3:28774534-28774553 None:intergenic 45.0%
AGGCAACCGCAAGTGAAATA+GGG + chr1_3:28774579-28774598 None:intergenic 45.0%
TAGGCAACCGCAAGTGAAAT+AGG + chr1_3:28774580-28774599 None:intergenic 45.0%
GTATAATAGAGCGGTGGAAG+CGG + chr1_3:28774813-28774832 None:intergenic 45.0%
GGCTTGCAGTGTTTATTCCT+GGG + chr1_3:28775017-28775036 None:intergenic 45.0%
! TGGCTTGCAGTGTTTATTCC+TGG + chr1_3:28775018-28775037 None:intergenic 45.0%
GAAGGGAAAATCCTGTTCCT+GGG + chr1_3:28775125-28775144 None:intergenic 45.0%
AGAAGGGAAAATCCTGTTCC+TGG + chr1_3:28775126-28775145 None:intergenic 45.0%
!! ACAAACGCCCCCTTAGTTTT+TGG - chr1_3:28775194-28775213 Msa0113090:intron 45.0%
TTCACCCATGCCTGTTAAGA+TGG + chr1_3:28775784-28775803 None:intergenic 45.0%
GACACTCATTGTGAAACGGA+GGG - chr1_3:28776130-28776149 Msa0113090:intron 45.0%
TGTGGTCAAGAATCAGCATG+AGG + chr1_3:28776246-28776265 None:intergenic 45.0%
GTAAAGAAGGACCAGCCATT+TGG - chr1_3:28776572-28776591 Msa0113090:intron 45.0%
CAAGAAGACAGCAGACCAAA+TGG + chr1_3:28776590-28776609 None:intergenic 45.0%
! CGAGGACCTATTTTGCTAAC+GGG + chr1_3:28777301-28777320 None:intergenic 45.0%
! GCGAGGACCTATTTTGCTAA+CGG + chr1_3:28777300-28777319 None:intergenic 45.0%
! GCGAGGACCTATTTTGCTAA+CGG - chr1_3:28777300-28777319 Msa0113090:intron 45.0%
AGCAAAACTAGGGAGTAGTG+AGG + chr1_3:28777746-28777765 None:intergenic 45.0%
CAGACCAAATTCAACTCAGC+TGG - chr1_3:28778249-28778268 Msa0113090:intron 45.0%
! GTTGCCAGCTGAGTTGAATT+TGG + chr1_3:28778256-28778275 None:intergenic 45.0%
TTGATACAACTGTGCGGCTT+TGG - chr1_3:28778284-28778303 Msa0113090:intron 45.0%
TGATACAACTGTGCGGCTTT+GGG - chr1_3:28778285-28778304 Msa0113090:intron 45.0%
TACCTGTCTTATGTTGTGGG+TGG - chr1_3:28778500-28778519 Msa0113090:intron 45.0%
ACCTGTCTTATGTTGTGGGT+GGG - chr1_3:28778501-28778520 Msa0113090:intron 45.0%
TGGAGTGATAAGGAGGTTGA+GGG + chr1_3:28778532-28778551 None:intergenic 45.0%
TAAGGAGTGGAGTGATAAGG+AGG + chr1_3:28778539-28778558 None:intergenic 45.0%
!! TAAGGTTGGTTTGGTGGTTG+GGG + chr1_3:28778571-28778590 None:intergenic 45.0%
!! CGGATATAAGGTTGGTTTGG+TGG + chr1_3:28778577-28778596 None:intergenic 45.0%
GATTAGGGCGGATATAAGGT+TGG + chr1_3:28778585-28778604 None:intergenic 45.0%
CAGTGATTAGGGCGGATATA+AGG + chr1_3:28778589-28778608 None:intergenic 45.0%
ACACAGCACCTAGACAATAC+TGG + chr1_3:28778624-28778643 None:intergenic 45.0%
! ATTGTCTAGGTGCTGTGTCT+AGG - chr1_3:28778626-28778645 Msa0113090:intron 45.0%
GATGCTTAACCAATACCCCT+GGG - chr1_3:28778792-28778811 Msa0113090:intron 45.0%
ATGCTTAACCAATACCCCTG+GGG - chr1_3:28778793-28778812 Msa0113090:intron 45.0%
!! AATGTTAAAGAGTGCCCCAG+GGG + chr1_3:28778810-28778829 None:intergenic 45.0%
!! GAATGTTAAAGAGTGCCCCA+GGG + chr1_3:28778811-28778830 None:intergenic 45.0%
!! AGAATGTTAAAGAGTGCCCC+AGG + chr1_3:28778812-28778831 None:intergenic 45.0%
TCTGAATCTGGTAGGATACC+TGG - chr1_3:28778933-28778952 Msa0113090:intron 45.0%
ATCTGGTAGGATACCTGGTT+TGG - chr1_3:28778938-28778957 Msa0113090:intron 45.0%
TCTGGTAGGATACCTGGTTT+GGG - chr1_3:28778939-28778958 Msa0113090:intron 45.0%
AGAATTGCTTATGCGGCAGT+TGG - chr1_3:28779001-28779020 Msa0113090:intron 45.0%
TAGGCAAATGAGTGTAGTGG+AGG - chr1_3:28779030-28779049 Msa0113090:intron 45.0%
!! CTCTCTAAGATCCAGCATGT+TGG + chr1_3:28779220-28779239 None:intergenic 45.0%
GCCAGTGTTATCGAAGATTG+AGG - chr1_3:28779241-28779260 Msa0113090:intron 45.0%
! TGAGGACATGTGGGCTAATA+AGG - chr1_3:28779259-28779278 Msa0113090:intron 45.0%
GGGCTAATAAGGTGCATCAA+CGG - chr1_3:28779270-28779289 Msa0113090:intron 45.0%
GGCTAATAAGGTGCATCAAC+GGG - chr1_3:28779271-28779290 Msa0113090:intron 45.0%
GGTGCATCAACGGGATATTA+TGG - chr1_3:28779280-28779299 Msa0113090:intron 45.0%
TGTAGTGGTGTTCATGAGCA+TGG - chr1_3:28779376-28779395 Msa0113090:intron 45.0%
CCAAGACTGAAACCAAAGCA+TGG + chr1_3:28779411-28779430 None:intergenic 45.0%
! CCATGCTTTGGTTTCAGTCT+TGG - chr1_3:28779408-28779427 Msa0113090:intron 45.0%
! TTTATCGTGATGCACTGACG+CGG + chr1_3:28779509-28779528 None:intergenic 45.0%
AAGGTCCAGGTGAGATGAAT+AGG - chr1_3:28779560-28779579 Msa0113090:intron 45.0%
AGGTCCAGGTGAGATGAATA+GGG - chr1_3:28779561-28779580 Msa0113090:intron 45.0%
TCTTCCCTATTCATCTCACC+TGG + chr1_3:28779568-28779587 None:intergenic 45.0%
!! AGGGTTCTGATTTGGGTATG+GGG + chr1_3:28779869-28779888 None:intergenic 45.0%
!! CTAGGGTTCTGATTTGGGTA+TGG + chr1_3:28779871-28779890 None:intergenic 45.0%
! GGTGTCTAGGGTTCTGATTT+GGG + chr1_3:28779876-28779895 None:intergenic 45.0%
! TGGTGTCTAGGGTTCTGATT+TGG + chr1_3:28779877-28779896 None:intergenic 45.0%
GGTGGAAACAAGTGTAGTTG+AGG + chr1_3:28779920-28779939 None:intergenic 45.0%
CGAGGTTGAACAGTTCATCA+TGG - chr1_3:28779947-28779966 Msa0113090:intron 45.0%
AGGTTTCACTCTAGACCTTG+TGG - chr1_3:28780034-28780053 Msa0113090:intron 45.0%
GGTTTCACTCTAGACCTTGT+GGG - chr1_3:28780035-28780054 Msa0113090:intron 45.0%
! CACATGGGCTATCTCAATGT+GGG + chr1_3:28780065-28780084 None:intergenic 45.0%
CCCATGTGCTCAGAAAGTAA+AGG - chr1_3:28780077-28780096 Msa0113090:intron 45.0%
ACTATCTTTGACCCAAACCC+AGG - chr1_3:28780113-28780132 Msa0113090:intron 45.0%
TAGAACTCTCACCTGGGTTT+GGG + chr1_3:28780127-28780146 None:intergenic 45.0%
ATTGGAGACGGAAGCAACAT+GGG + chr1_3:28780184-28780203 None:intergenic 45.0%
TATTGGAGACGGAAGCAACA+TGG + chr1_3:28780185-28780204 None:intergenic 45.0%
GAATGACACGCGTCTAGTAT+TGG + chr1_3:28780202-28780221 None:intergenic 45.0%
TCCCACTACAATTCTGACTG+GGG - chr1_3:28780220-28780239 Msa0113090:intron 45.0%
CATAGGACGTACACACCAAA+GGG + chr1_3:28780333-28780352 None:intergenic 45.0%
TCATAGGACGTACACACCAA+AGG + chr1_3:28780334-28780353 None:intergenic 45.0%
!! TGCTGCTTAAAGGGCATCAT+AGG + chr1_3:28780350-28780369 None:intergenic 45.0%
TTGGAATACAAGTCCACAGC+CGG + chr1_3:28780545-28780564 None:intergenic 45.0%
TGGGCTTCGGAGAAATGTAA+AGG - chr1_3:28780588-28780607 Msa0113090:intron 45.0%
TTATGATGGCACAGATTGGG+AGG - chr1_3:28780639-28780658 Msa0113090:intron 45.0%
TATGATGGCACAGATTGGGA+GGG - chr1_3:28780640-28780659 Msa0113090:intron 45.0%
!! AGGTATAAGCATTGAGCACC+TGG + chr1_3:28780921-28780940 None:intergenic 45.0%
TTAAAGCTGGCACTCACCTT+TGG - chr1_3:28780991-28781010 Msa0113090:intron 45.0%
TATGCCTGCAAAGAAAGGCT+TGG + chr1_3:28781033-28781052 None:intergenic 45.0%
CGCTATATGCCTGCAAAGAA+AGG + chr1_3:28781038-28781057 None:intergenic 45.0%
CAGGCAAATGCACTCATTAC+AGG - chr1_3:28781366-28781385 Msa0113090:intron 45.0%
!! GTATTTCTAGGGACACTCTG+GGG - chr1_3:28781492-28781511 Msa0113090:intron 45.0%
! GGAGGTACATTGTGTATGCT+GGG - chr1_3:28781513-28781532 Msa0113090:intron 45.0%
AAAGTTTGGTCACTTGCCTC+TGG - chr1_3:28781580-28781599 Msa0113090:intron 45.0%
CCAAGAGGTTGGAGTAACTT+GGG + chr1_3:28781663-28781682 None:intergenic 45.0%
ACCAAGAGGTTGGAGTAACT+TGG + chr1_3:28781664-28781683 None:intergenic 45.0%
TAGTAGAGTTAGGGTGCGTT+TGG - chr1_3:28781781-28781800 Msa0113090:intron 45.0%
AAAAATAAGTTGCGCCTGCC+TGG - chr1_3:28782306-28782325 Msa0113090:CDS 45.0%
TGATTACGTTGCTTAACCCC+TGG - chr1_3:28782604-28782623 Msa0113090:intron 45.0%
TATGACCATACCAGCTCATG+AGG - chr1_3:28782911-28782930 Msa0113090:intron 45.0%
ATGACCATACCAGCTCATGA+GGG - chr1_3:28782912-28782931 Msa0113090:intron 45.0%
GATATTACACCCTCATGAGC+TGG + chr1_3:28782924-28782943 None:intergenic 45.0%
TGTCACAGGTGATTGTGCTA+GGG + chr1_3:28782949-28782968 None:intergenic 45.0%
TAGCACAATCACCTGTGACA+GGG - chr1_3:28782949-28782968 Msa0113090:intron 45.0%
!!! TTTTATTATGATATTAAAAA+AGG + chr1_3:28766823-28766842 None:intergenic 5.0%
!! TTTATTATATTATATAATGT+GGG - chr1_3:28773761-28773780 Msa0113090:intron 5.0%
!! AATTTAATAAAATTTAAGTA+GGG + chr1_3:28777344-28777363 None:intergenic 5.0%
!! AAATTTAATAAAATTTAAGT+AGG + chr1_3:28777343-28777362 None:intergenic 5.0%
!!! CTTAAATTTTATTAAATTTT+TGG - chr1_3:28776727-28776746 Msa0113090:CDS 5.0%
!!! CTTAAATTTTATTAAATTTT+TGG + chr1_3:28776727-28776746 None:intergenic 5.0%
!! AAATTTAATAAAATTTAAGT+AGG - chr1_3:28777343-28777362 Msa0113090:intron 5.0%
!! AATTTAATAAAATTTAAGTA+GGG - chr1_3:28777344-28777363 Msa0113090:intron 5.0%
!! AATTAATTAACAAAAAAATA+CGG - chr1_3:28782090-28782109 Msa0113090:CDS 5.0%
CGAACCCTAATTCCCCGAAA+AGG - chr1_3:28766317-28766336 Msa0113090:three_prime_UTR 50.0%
GCATTGGGATGGATCATGGA+TGG + chr1_3:28766396-28766415 None:intergenic 50.0%
CACTGCATTGGGATGGATCA+TGG + chr1_3:28766400-28766419 None:intergenic 50.0%
ACTCACTCACCTACTGGATC+AGG + chr1_3:28766761-28766780 None:intergenic 50.0%
AGTGTGACTCACTCACCTAC+TGG + chr1_3:28766767-28766786 None:intergenic 50.0%
! TCGAGTGGTGGTCTGTTTTC+TGG - chr1_3:28766875-28766894 Msa0113090:intron 50.0%
! CGAGTGGTGGTCTGTTTTCT+GGG - chr1_3:28766876-28766895 Msa0113090:intron 50.0%
GCCAAGCTCAGATGCAAAGA+AGG - chr1_3:28767097-28767116 Msa0113090:intron 50.0%
CCCTTCTTTGCATCTGAGCT+TGG + chr1_3:28767101-28767120 None:intergenic 50.0%
GCAATCTACTGCCACTGCTT+TGG - chr1_3:28767185-28767204 Msa0113090:intron 50.0%
CATGCAGAGATCCTTACCTG+TGG - chr1_3:28767621-28767640 Msa0113090:intron 50.0%
CCTCCCTGCCCATAAATTGA+AGG + chr1_3:28767649-28767668 None:intergenic 50.0%
CCTTCAATTTATGGGCAGGG+AGG - chr1_3:28767646-28767665 Msa0113090:intron 50.0%
GGAGGATTGCAGTCAAAGTC+TGG - chr1_3:28767664-28767683 Msa0113090:intron 50.0%
GGCATAGAACAAATTCGCCC+AGG - chr1_3:28768104-28768123 Msa0113090:intron 50.0%
CTTGTGCATGTACCTGAGCA+AGG + chr1_3:28768211-28768230 None:intergenic 50.0%
CTTGCTCAGGTACATGCACA+AGG - chr1_3:28768209-28768228 Msa0113090:intron 50.0%
TAGAGATGAACCCACGGCTT+AGG - chr1_3:28768825-28768844 Msa0113090:intron 50.0%
TCGAACCTGAGACCTTGAGA+TGG + chr1_3:28768889-28768908 None:intergenic 50.0%
! TCAGGTTCGATTTTCTCCGG+TGG - chr1_3:28768899-28768918 Msa0113090:intron 50.0%
ACCCAAATGCCGCAATTAGG+CGG + chr1_3:28770064-28770083 None:intergenic 50.0%
GCAACCCAAATGCCGCAATT+AGG + chr1_3:28770067-28770086 None:intergenic 50.0%
CACAATGAAGGAGTTGGAGG+AGG + chr1_3:28770101-28770120 None:intergenic 50.0%
GGAAGCCCTACAACAGATCT+AGG + chr1_3:28770265-28770284 None:intergenic 50.0%
GTCCATGCTTCAGGCTCATT+GGG - chr1_3:28770291-28770310 Msa0113090:intron 50.0%
ATGCCGCAATTAGGCAGCTA+GGG + chr1_3:28770366-28770385 None:intergenic 50.0%
AATGCCGCAATTAGGCAGCT+AGG + chr1_3:28770367-28770386 None:intergenic 50.0%
AGCTGCCTAATTGCGGCATT+TGG - chr1_3:28770367-28770386 Msa0113090:intron 50.0%
GCTGCCTAATTGCGGCATTT+GGG - chr1_3:28770368-28770387 Msa0113090:intron 50.0%
GCAACCCAAATGCCGCAATT+AGG + chr1_3:28770067-28770086 None:intergenic 50.0%
GTCTCAATAACGGCCACTAC+AGG - chr1_3:28770670-28770689 Msa0113090:intron 50.0%
TTTCTCCAAACTCTCCGCCT+TGG + chr1_3:28770746-28770765 None:intergenic 50.0%
TTTGGAGAAAGCGGCTGAAG+CGG - chr1_3:28770756-28770775 Msa0113090:intron 50.0%
GCATTGTAGGGACCATTTGG+TGG + chr1_3:28771411-28771430 None:intergenic 50.0%
TCGGCATTGTAGGGACCATT+TGG + chr1_3:28771414-28771433 None:intergenic 50.0%
CTGGTCTAATGCCAAGAGGA+GGG + chr1_3:28771503-28771522 None:intergenic 50.0%
GAACACAGCATGACCAATCC+TGG + chr1_3:28771522-28771541 None:intergenic 50.0%
! GCATTCACAGCAACTGGTTC+AGG - chr1_3:28771904-28771923 Msa0113090:intron 50.0%
AGGAAAGGGCCTACATCTTC+AGG - chr1_3:28772580-28772599 Msa0113090:intron 50.0%
TTGGCAGCTCCTGAAGATGT+AGG + chr1_3:28772592-28772611 None:intergenic 50.0%
TCAGGAGCTGCCAATAGTAC+TGG - chr1_3:28772598-28772617 Msa0113090:intron 50.0%
!! GCTGCCAATAGTACTGGTAC+AGG - chr1_3:28772604-28772623 Msa0113090:intron 50.0%
!! TCCTGGTGATGGTGTTGCTA+TGG - chr1_3:28772678-28772697 Msa0113090:intron 50.0%
!! TGGTGATGGTGTTGCTATGG+CGG - chr1_3:28772681-28772700 Msa0113090:intron 50.0%
GGCAACTTGCAGAATGTTGC+TGG - chr1_3:28772703-28772722 Msa0113090:intron 50.0%
! TATGGTACTGAAGGAGCAGG+CGG - chr1_3:28772748-28772767 Msa0113090:intron 50.0%
TGCATCTTCCACAAACCAGC+TGG - chr1_3:28772774-28772793 Msa0113090:intron 50.0%
CGACCTCACTTAGTGGGATA+TGG - chr1_3:28772882-28772901 Msa0113090:intron 50.0%
! CTCTCACAGGATGATGGTGA+TGG - chr1_3:28773416-28773435 Msa0113090:intron 50.0%
AATCTGTAGCATGCTCGGCA+GGG + chr1_3:28773472-28773491 None:intergenic 50.0%
CTTCTTGTCATGTCCAGCAC+TGG + chr1_3:28773658-28773677 None:intergenic 50.0%
! CAGTGCTGGACATGACAAGA+AGG - chr1_3:28773656-28773675 Msa0113090:intron 50.0%
CCCGATTGGTGCACATGATA+AGG - chr1_3:28774187-28774206 Msa0113090:intron 50.0%
GAAAGTGGGGTTCTCAATCC+TGG + chr1_3:28774535-28774554 None:intergenic 50.0%
GGCAACCGCAAGTGAAATAG+GGG + chr1_3:28774578-28774597 None:intergenic 50.0%
ATCAGTGCAGCAGCGAAACA+TGG + chr1_3:28774723-28774742 None:intergenic 50.0%
! TGTTTCGCTGCTGCACTGAT+TGG - chr1_3:28774723-28774742 Msa0113090:intron 50.0%
TTAGTAAATCGGTGCAGCGG+CGG + chr1_3:28774843-28774862 None:intergenic 50.0%
!!! CTAAGGGGGCGTTTGTTTTG+CGG + chr1_3:28775190-28775209 None:intergenic 50.0%
!! AACGCCCCCTTAGTTTTTGG+TGG - chr1_3:28775197-28775216 Msa0113090:intron 50.0%
CGACACTCATTGTGAAACGG+AGG - chr1_3:28776129-28776148 Msa0113090:intron 50.0%
AGTTGTCGGGTCAAGGTTGA+CGG - chr1_3:28776316-28776335 Msa0113090:intron 50.0%
AAGACAGCAGACCAAATGGC+TGG + chr1_3:28776586-28776605 None:intergenic 50.0%
ACAAGCTAGCCAGCTACCTA+TGG + chr1_3:28777850-28777869 None:intergenic 50.0%
TCCCACCCACAACATAAGAC+AGG + chr1_3:28778505-28778524 None:intergenic 50.0%
GTGGAGTGATAAGGAGGTTG+AGG + chr1_3:28778533-28778552 None:intergenic 50.0%
! GGGCGGATATAAGGTTGGTT+TGG + chr1_3:28778580-28778599 None:intergenic 50.0%
GGATGCTTAACCAATACCCC+TGG - chr1_3:28778791-28778810 Msa0113090:intron 50.0%
ATTGGGATTAGGCCCAAACC+AGG + chr1_3:28778954-28778973 None:intergenic 50.0%
ATTGCTTATGCGGCAGTTGG+TGG - chr1_3:28779004-28779023 Msa0113090:intron 50.0%
TTGCTTATGCGGCAGTTGGT+GGG - chr1_3:28779005-28779024 Msa0113090:intron 50.0%
GGGTAGGCAAATGAGTGTAG+TGG - chr1_3:28779027-28779046 Msa0113090:intron 50.0%
TGGGAATGTTTCCCTTTGGG+TGG - chr1_3:28779300-28779319 Msa0113090:intron 50.0%
AGTGGTGTTCATGAGCATGG+AGG - chr1_3:28779379-28779398 Msa0113090:intron 50.0%
GTGGTGTTCATGAGCATGGA+GGG - chr1_3:28779380-28779399 Msa0113090:intron 50.0%
TGGAGGGTCATACCATGCTT+TGG - chr1_3:28779396-28779415 Msa0113090:intron 50.0%
AGTCTGCATCGAGGTTCTCT+TGG + chr1_3:28779436-28779455 None:intergenic 50.0%
AAGAGAACCTCGATGCAGAC+TGG - chr1_3:28779435-28779454 Msa0113090:intron 50.0%
AGAGAACCTCGATGCAGACT+GGG - chr1_3:28779436-28779455 Msa0113090:intron 50.0%
ATGATACCCAGTCTGCATCG+AGG + chr1_3:28779445-28779464 None:intergenic 50.0%
TCCAACCGCTACATGTGGTT+TGG + chr1_3:28779821-28779840 None:intergenic 50.0%
TTCTCTCCAACCGCTACATG+TGG + chr1_3:28779826-28779845 None:intergenic 50.0%
! CTCAACTGGTCTGGTGTCTA+GGG + chr1_3:28779888-28779907 None:intergenic 50.0%
TTGTTTCCACCTGTGAGTCG+AGG - chr1_3:28779929-28779948 Msa0113090:intron 50.0%
ACTGTTCAACCTCGACTCAC+AGG + chr1_3:28779941-28779960 None:intergenic 50.0%
! GCACATGGGCTATCTCAATG+TGG + chr1_3:28780066-28780085 None:intergenic 50.0%
CTAGAACTCTCACCTGGGTT+TGG + chr1_3:28780128-28780147 None:intergenic 50.0%
TTGGAGACGGAAGCAACATG+GGG + chr1_3:28780183-28780202 None:intergenic 50.0%
! CACGCGTCTAGTATTGGAGA+CGG + chr1_3:28780196-28780215 None:intergenic 50.0%
GCCCCAGTCAGAATTGTAGT+GGG + chr1_3:28780224-28780243 None:intergenic 50.0%
TGCCCCAGTCAGAATTGTAG+TGG + chr1_3:28780225-28780244 None:intergenic 50.0%
TTGTCGTTCTGCGAACCCTT+TGG - chr1_3:28780315-28780334 Msa0113090:intron 50.0%
GGGAGGAAAGTTCATGGGTT+TGG - chr1_3:28780479-28780498 Msa0113090:intron 50.0%
!! TATTGTGTTGACTCCGGCTG+TGG - chr1_3:28780529-28780548 Msa0113090:intron 50.0%
!! GGTTTTGCTTCAGTGGGCTT+CGG - chr1_3:28780575-28780594 Msa0113090:intron 50.0%
! ACAGATTGGGAGGGTTTGGT+GGG - chr1_3:28780649-28780668 Msa0113090:intron 50.0%
CCAAACCTTACACCACCAAG+TGG + chr1_3:28780747-28780766 None:intergenic 50.0%
!! CCACTTGGTGGTGTAAGGTT+TGG - chr1_3:28780744-28780763 Msa0113090:intron 50.0%
CACAACATTGCCAGATGCTG+CGG + chr1_3:28781323-28781342 None:intergenic 50.0%
! GGGAGGTACATTGTGTATGC+TGG - chr1_3:28781512-28781531 Msa0113090:intron 50.0%
CCCAAGTTACTCCAACCTCT+TGG - chr1_3:28781660-28781679 Msa0113090:intron 50.0%
TCCAACCTCTTGGTTATCGG+AGG - chr1_3:28781670-28781689 Msa0113090:intron 50.0%
TCCTCCGATAACCAAGAGGT+TGG + chr1_3:28781674-28781693 None:intergenic 50.0%
GGTATCCTCCGATAACCAAG+AGG + chr1_3:28781678-28781697 None:intergenic 50.0%
CTTGGTTATCGGAGGATACC+AGG - chr1_3:28781678-28781697 Msa0113090:intron 50.0%
GAGACTTACTTCTACCAGGC+AGG + chr1_3:28782323-28782342 None:intergenic 50.0%
!! TGGTGTTGATCGGACTACCA+GGG + chr1_3:28782624-28782643 None:intergenic 50.0%
!! GTCTTTGGAGCTATGGCACA+TGG - chr1_3:28782875-28782894 Msa0113090:intron 50.0%
TACACCCTCATGAGCTGGTA+TGG + chr1_3:28782919-28782938 None:intergenic 50.0%
CTGTCACAGGTGATTGTGCT+AGG + chr1_3:28782950-28782969 None:intergenic 50.0%
CTAGCACAATCACCTGTGAC+AGG - chr1_3:28782948-28782967 Msa0113090:intron 50.0%
ACAATCACCTGTGACAGGGA+TGG - chr1_3:28782953-28782972 Msa0113090:five_prime_UTR 50.0%
TGGGATGGATCATGGATGGC+CGG + chr1_3:28766392-28766411 None:intergenic 55.0%
GCAGCAATTGATGCTCCTGG+AGG - chr1_3:28766844-28766863 Msa0113090:intron 55.0%
AGAGGAGGAGTTCCAATGGG+AGG + chr1_3:28767135-28767154 None:intergenic 55.0%
ACAACAGCAGCTCCTTGCTC+AGG - chr1_3:28768196-28768215 Msa0113090:intron 55.0%
ATGCACCATGAGGCCAGACA+AGG + chr1_3:28768399-28768418 None:intergenic 55.0%
GATGAACCCACGGCTTAGGT+TGG - chr1_3:28768829-28768848 Msa0113090:intron 55.0%
ACCAGACCAACCTAAGCCGT+GGG + chr1_3:28768838-28768857 None:intergenic 55.0%
TACCAGACCAACCTAAGCCG+TGG + chr1_3:28768839-28768858 None:intergenic 55.0%
!! GTATTGGCTTGGGACCTGAG+AGG - chr1_3:28768859-28768878 Msa0113090:intron 55.0%
! CTTGAGATGGAGCACCTCTC+AGG + chr1_3:28768876-28768895 None:intergenic 55.0%
!! CTGAGAGGTGCTCCATCTCA+AGG - chr1_3:28768874-28768893 Msa0113090:intron 55.0%
GTGCTCCATCTCAAGGTCTC+AGG - chr1_3:28768881-28768900 Msa0113090:intron 55.0%
TTCCCCTAGCCGCCTAATTG+CGG - chr1_3:28770052-28770071 Msa0113090:intron 55.0%
ATGCCGCAATTAGGCGGCTA+GGG + chr1_3:28770058-28770077 None:intergenic 55.0%
AATGCCGCAATTAGGCGGCT+AGG + chr1_3:28770059-28770078 None:intergenic 55.0%
AGCCGCCTAATTGCGGCATT+TGG - chr1_3:28770059-28770078 Msa0113090:intron 55.0%
GCCGCCTAATTGCGGCATTT+GGG - chr1_3:28770060-28770079 Msa0113090:intron 55.0%
GTTGGAGGAGGCTGCAATGA+AGG + chr1_3:28770089-28770108 None:intergenic 55.0%
AGCCTGAAGCATGGACGATG+CGG + chr1_3:28770287-28770306 None:intergenic 55.0%
CGTCCATGCTTCAGGCTCAT+TGG - chr1_3:28770290-28770309 Msa0113090:intron 55.0%
CTAGGGGCGGACCACAATTA+AGG + chr1_3:28770349-28770368 None:intergenic 55.0%
TGCCGCAATTAGGCAGCTAG+GGG + chr1_3:28770365-28770384 None:intergenic 55.0%
TGTGTTAGGTGTGAAGGGGG+TGG - chr1_3:28770422-28770441 Msa0113090:intron 55.0%
GGCGGAGAGTTTGGAGAAAG+CGG - chr1_3:28770747-28770766 Msa0113090:intron 55.0%
TTGGAGAAAGCGGCTGAAGC+GGG - chr1_3:28770757-28770776 Msa0113090:intron 55.0%
GGAGCGAAGCGGGTATAAAG+CGG - chr1_3:28770790-28770809 Msa0113090:intron 55.0%
GAGCGAAGCGGGTATAAAGC+GGG - chr1_3:28770791-28770810 Msa0113090:intron 55.0%
TTAGTGTCCGCGCCACCAAA+TGG - chr1_3:28771396-28771415 Msa0113090:intron 55.0%
AATGCCAAGAGGAGGGCAGA+CGG + chr1_3:28771496-28771515 None:intergenic 55.0%
CCTGGTCTAATGCCAAGAGG+AGG + chr1_3:28771504-28771523 None:intergenic 55.0%
CCTCCTCTTGGCATTAGACC+AGG - chr1_3:28771501-28771520 Msa0113090:intron 55.0%
GCCATAGCAACACCATCACC+AGG + chr1_3:28772682-28772701 None:intergenic 55.0%
!! GGTGATGGTGTTGCTATGGC+GGG - chr1_3:28772682-28772701 Msa0113090:intron 55.0%
GAATCTGTAGCATGCTCGGC+AGG + chr1_3:28773473-28773492 None:intergenic 55.0%
TGCTCCTATTACGGCCCGAT+TGG - chr1_3:28774173-28774192 Msa0113090:intron 55.0%
TGCACCAATCGGGCCGTAAT+AGG + chr1_3:28774180-28774199 None:intergenic 55.0%
! ACACGAGATGCCCAGGGTTT+TGG + chr1_3:28776180-28776199 None:intergenic 55.0%
GGATAGACACGAGATGCCCA+GGG + chr1_3:28776186-28776205 None:intergenic 55.0%
AGGATAGACACGAGATGCCC+AGG + chr1_3:28776187-28776206 None:intergenic 55.0%
AGCAAACGGTGAAGCACACG+TGG - chr1_3:28776808-28776827 Msa0113090:intron 55.0%
AGCAAACGGTGAAGCACACG+TGG + chr1_3:28776808-28776827 None:intergenic 55.0%
TGGTTGGGGTGGGAGAGTTA+AGG + chr1_3:28778557-28778576 None:intergenic 55.0%
!! GTTGGTTTGGTGGTTGGGGT+GGG + chr1_3:28778567-28778586 None:intergenic 55.0%
!! AAAGAGTGCCCCAGGGGTAT+TGG + chr1_3:28778804-28778823 None:intergenic 55.0%
! TGCTTATGCGGCAGTTGGTG+GGG - chr1_3:28779006-28779025 Msa0113090:intron 55.0%
!! GCTCTAGGGATCCACCCAAA+GGG + chr1_3:28779314-28779333 None:intergenic 55.0%
!! AGCTCTAGGGATCCACCCAA+AGG + chr1_3:28779315-28779334 None:intergenic 55.0%
GGTGGATCCCTAGAGCTGAA+AGG - chr1_3:28779318-28779337 Msa0113090:intron 55.0%
GGACGCCAAACCACATGTAG+CGG - chr1_3:28779813-28779832 Msa0113090:intron 55.0%
GCCAAACCACATGTAGCGGT+TGG - chr1_3:28779817-28779836 Msa0113090:intron 55.0%
! CCTCAACTGGTCTGGTGTCT+AGG + chr1_3:28779889-28779908 None:intergenic 55.0%
CCTAGACACCAGACCAGTTG+AGG - chr1_3:28779886-28779905 Msa0113090:intron 55.0%
CAAGGTTGCCTCAACTGGTC+TGG + chr1_3:28779897-28779916 None:intergenic 55.0%
TGAGGCAAGGTTGCCTCAAC+TGG + chr1_3:28779902-28779921 None:intergenic 55.0%
GTTCAACCTCGACTCACAGG+TGG + chr1_3:28779938-28779957 None:intergenic 55.0%
TGGCACAGATTGGGAGGGTT+TGG - chr1_3:28780645-28780664 Msa0113090:intron 55.0%
CACAGATTGGGAGGGTTTGG+TGG - chr1_3:28780648-28780667 Msa0113090:intron 55.0%
!! CAGATTGGGAGGGTTTGGTG+GGG - chr1_3:28780650-28780669 Msa0113090:intron 55.0%
!! GGGTTTGGTGGGGTTACATG+TGG - chr1_3:28780660-28780679 Msa0113090:intron 55.0%
GCAGCCAAGCCTTTCTTTGC+AGG - chr1_3:28781026-28781045 Msa0113090:CDS 55.0%
CAAGCAGGGAGGATCTACAC+AGG - chr1_3:28781264-28781283 Msa0113090:intron 55.0%
AGGGAGGATCTACACAGGTG+AGG - chr1_3:28781269-28781288 Msa0113090:intron 55.0%
CACAGGTGAGGTTTCAGCCA+AGG - chr1_3:28781281-28781300 Msa0113090:intron 55.0%
GTGAGGTTTCAGCCAAGGAG+TGG - chr1_3:28781286-28781305 Msa0113090:intron 55.0%
! TTTCTAGGGACACTCTGGGG+AGG - chr1_3:28781495-28781514 Msa0113090:intron 55.0%
GCTCATTGGGATTCGAAGGG+TGG - chr1_3:28782277-28782296 Msa0113090:CDS 55.0%
TTGGGATTCGAAGGGTGGAG+CGG - chr1_3:28782282-28782301 Msa0113090:CDS 55.0%
!! GGTGTTGATCGGACTACCAG+GGG + chr1_3:28782623-28782642 None:intergenic 55.0%
!! CTGGTGTTGATCGGACTACC+AGG + chr1_3:28782625-28782644 None:intergenic 55.0%
!! TGCAGGGGACTGGTGTTGAT+CGG + chr1_3:28782634-28782653 None:intergenic 55.0%
AGCAGTCATTTGCAGGGGAC+TGG + chr1_3:28782644-28782663 None:intergenic 55.0%
GAAGCAACCATCCCTGTCAC+AGG + chr1_3:28782963-28782982 None:intergenic 55.0%
GTGCACCTTGTCTGGCCTCA+TGG - chr1_3:28768391-28768410 Msa0113090:intron 60.0%
!! ACCCACGGCTTAGGTTGGTC+TGG - chr1_3:28768834-28768853 Msa0113090:intron 60.0%
TGCCGCAATTAGGCGGCTAG+GGG + chr1_3:28770057-28770076 None:intergenic 60.0%
GCCACCCTCACCTTACAAGC+CGG - chr1_3:28770192-28770211 Msa0113090:intron 60.0%
!! ACCGGCTTGTAAGGTGAGGG+TGG + chr1_3:28770196-28770215 None:intergenic 60.0%
TCCCGCATCGTCCATGCTTC+AGG - chr1_3:28770282-28770301 Msa0113090:intron 60.0%
GCCTGAAGCATGGACGATGC+GGG + chr1_3:28770286-28770305 None:intergenic 60.0%
GGCCCAATGAGCCTGAAGCA+TGG + chr1_3:28770296-28770315 None:intergenic 60.0%
GCTCATTGGGCCTGAGCTTG+AGG - chr1_3:28770304-28770323 Msa0113090:intron 60.0%
CATTGGGCCTGAGCTTGAGG+AGG - chr1_3:28770307-28770326 Msa0113090:intron 60.0%
CACCACACCTCCTCAAGCTC+AGG + chr1_3:28770317-28770336 None:intergenic 60.0%
! CTGAGCTTGAGGAGGTGTGG+TGG - chr1_3:28770315-28770334 Msa0113090:intron 60.0%
CGCAATTAGGCAGCTAGGGG+CGG + chr1_3:28770362-28770381 None:intergenic 60.0%
CGCCCCTAGCTGCCTAATTG+CGG - chr1_3:28770360-28770379 Msa0113090:intron 60.0%
AGACACGATGCAGCGCTCCA+AGG - chr1_3:28770726-28770745 Msa0113090:intron 60.0%
!! GTAGGGACCATTTGGTGGCG+CGG + chr1_3:28771406-28771425 None:intergenic 60.0%
ATGCCAAGAGGAGGGCAGAC+GGG + chr1_3:28771495-28771514 None:intergenic 60.0%
AGAGCGGTGGAAGCGGAACA+TGG + chr1_3:28774806-28774825 None:intergenic 60.0%
GTCGGGTCAAGGTTGACGGA+TGG - chr1_3:28776320-28776339 Msa0113090:intron 60.0%
GAAAACGCAGAGCACGCCAG+AGG - chr1_3:28778195-28778214 Msa0113090:intron 60.0%
GGGGTGGGAGAGTTAAGGAG+TGG + chr1_3:28778552-28778571 None:intergenic 60.0%
!! GGTTGGTTTGGTGGTTGGGG+TGG + chr1_3:28778568-28778587 None:intergenic 60.0%
!! GCTTATGCGGCAGTTGGTGG+GGG - chr1_3:28779007-28779026 Msa0113090:intron 60.0%
TCAATGTGGGCTCGCCCACA+AGG + chr1_3:28780052-28780071 None:intergenic 60.0%
CACCACATGGGCTTGCAGCA+GGG + chr1_3:28780289-28780308 None:intergenic 60.0%
ACACCACATGGGCTTGCAGC+AGG + chr1_3:28780290-28780309 None:intergenic 60.0%
GCCAAGGAGTGGACACCTTC+TGG - chr1_3:28781297-28781316 Msa0113090:intron 60.0%
!! GCCAGAAGGTGTCCACTCCT+TGG + chr1_3:28781301-28781320 None:intergenic 60.0%
TGGGATTCGAAGGGTGGAGC+GGG - chr1_3:28782283-28782302 Msa0113090:CDS 60.0%
GGCCTGAGCTTGAGGAGGTG+TGG - chr1_3:28770312-28770331 Msa0113090:intron 65.0%
GGCCACTACAGGCGCTATCG+TGG - chr1_3:28770681-28770700 Msa0113090:intron 65.0%
CGCCACGATAGCGCCTGTAG+TGG + chr1_3:28770686-28770705 None:intergenic 65.0%
CACGATGCAGCGCTCCAAGG+CGG - chr1_3:28770729-28770748 Msa0113090:intron 65.0%
GCGCTCCAAGGCGGAGAGTT+TGG - chr1_3:28770738-28770757 Msa0113090:intron 65.0%
GCGCGATTGGTGGAGCGAAG+CGG - chr1_3:28770779-28770798 Msa0113090:intron 65.0%
CGCGATTGGTGGAGCGAAGC+GGG - chr1_3:28770780-28770799 Msa0113090:intron 65.0%
!! ATGCGGCAGTTGGTGGGGGT+AGG - chr1_3:28779011-28779030 Msa0113090:intron 65.0%
GTCCCTGCTGCAAGCCCATG+TGG - chr1_3:28780284-28780303 Msa0113090:intron 65.0%
CACCTTCTGGCCGCAGCATC+TGG - chr1_3:28781310-28781329 Msa0113090:intron 65.0%
TGCCAGATGCTGCGGCCAGA+AGG + chr1_3:28781315-28781334 None:intergenic 65.0%
GGCGCTATCGTGGCGCGAAG+CGG - chr1_3:28770691-28770710 Msa0113090:intron 70.0%
GCTGAAGCGGGCGCGATTGG+TGG - chr1_3:28770769-28770788 Msa0113090:intron 70.0%
CCAAGAGGAGGGCAGACGGG+TGG + chr1_3:28771492-28771511 None:intergenic 70.0%
CCACCCGTCTGCCCTCCTCT+TGG - chr1_3:28771489-28771508 Msa0113090:intron 70.0%
CGTGTGCACGCGCGTGCGTG+CGG - chr1_3:28769227-28769246 Msa0113090:intron 75.0%
GTGTGCACGCGCGTGCGTGC+GGG - chr1_3:28769228-28769247 Msa0113090:intron 75.0%
GCGGCTGAAGCGGGCGCGAT+TGG - chr1_3:28770766-28770785 Msa0113090:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 28766170 28783221 28766170 ID=Msa0113090;Name=Msa0113090
chr1_3 mRNA 28766170 28783221 28766170 ID=Msa0113090-mRNA-1;Parent=Msa0113090;Name=Msa0113090-mRNA-1;_AED=0.22;_eAED=0.22;_QI=308|0.75|0.82|1|0.81|0.82|17|202|717
chr1_3 exon 28766170 28766515 28766170 ID=Msa0113090-mRNA-1:exon:9510;Parent=Msa0113090-mRNA-1
chr1_3 exon 28767692 28767889 28767692 ID=Msa0113090-mRNA-1:exon:9509;Parent=Msa0113090-mRNA-1
chr1_3 exon 28768004 28768120 28768004 ID=Msa0113090-mRNA-1:exon:9508;Parent=Msa0113090-mRNA-1
chr1_3 exon 28768215 28768361 28768215 ID=Msa0113090-mRNA-1:exon:9507;Parent=Msa0113090-mRNA-1
chr1_3 exon 28771073 28771222 28771073 ID=Msa0113090-mRNA-1:exon:9506;Parent=Msa0113090-mRNA-1
chr1_3 exon 28775714 28775823 28775714 ID=Msa0113090-mRNA-1:exon:9505;Parent=Msa0113090-mRNA-1
chr1_3 exon 28775891 28776032 28775891 ID=Msa0113090-mRNA-1:exon:9504;Parent=Msa0113090-mRNA-1
chr1_3 exon 28776596 28776823 28776596 ID=Msa0113090-mRNA-1:exon:9503;Parent=Msa0113090-mRNA-1
chr1_3 exon 28781015 28781173 28781015 ID=Msa0113090-mRNA-1:exon:9502;Parent=Msa0113090-mRNA-1
chr1_3 exon 28781370 28781419 28781370 ID=Msa0113090-mRNA-1:exon:9501;Parent=Msa0113090-mRNA-1
chr1_3 exon 28781691 28781799 28781691 ID=Msa0113090-mRNA-1:exon:9500;Parent=Msa0113090-mRNA-1
chr1_3 exon 28781909 28781984 28781909 ID=Msa0113090-mRNA-1:exon:9499;Parent=Msa0113090-mRNA-1
chr1_3 exon 28782069 28782352 28782069 ID=Msa0113090-mRNA-1:exon:9498;Parent=Msa0113090-mRNA-1
chr1_3 exon 28782434 28782543 28782434 ID=Msa0113090-mRNA-1:exon:9497;Parent=Msa0113090-mRNA-1
chr1_3 exon 28782621 28782718 28782621 ID=Msa0113090-mRNA-1:exon:9496;Parent=Msa0113090-mRNA-1
chr1_3 exon 28782801 28782869 28782801 ID=Msa0113090-mRNA-1:exon:9495;Parent=Msa0113090-mRNA-1
chr1_3 exon 28782951 28783221 28782951 ID=Msa0113090-mRNA-1:exon:9494;Parent=Msa0113090-mRNA-1
chr1_3 five_prime_UTR 28782951 28783221 28782951 ID=Msa0113090-mRNA-1:five_prime_utr;Parent=Msa0113090-mRNA-1
chr1_3 five_prime_UTR 28782833 28782869 28782833 ID=Msa0113090-mRNA-1:five_prime_utr;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28782801 28782832 28782801 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28782621 28782718 28782621 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28782434 28782543 28782434 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28782069 28782352 28782069 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28781909 28781984 28781909 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28781691 28781799 28781691 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28781370 28781419 28781370 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28781015 28781173 28781015 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28776596 28776823 28776596 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28775891 28776032 28775891 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28775714 28775823 28775714 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28771073 28771222 28771073 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28768215 28768361 28768215 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28768004 28768120 28768004 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28767692 28767889 28767692 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 CDS 28766372 28766515 28766372 ID=Msa0113090-mRNA-1:cds;Parent=Msa0113090-mRNA-1
chr1_3 three_prime_UTR 28766170 28766371 28766170 ID=Msa0113090-mRNA-1:three_prime_utr;Parent=Msa0113090-mRNA-1
Gene Sequence

>Msa0113090

ATGGCGCAGAGTAATTGGGAAGCAGATAAGATGCTTGATGTTTACATATATGATTATTTGGTCAAGAAAAAGTTGCACAATACTGCTAAGTCATTTATGACAGAAGGGAAGGTTTCTCCTGATCCAGTAGCAATTGATGCTCCTGGAGGTTTTCTTTTCGAGTGGTGGTCTGTTTTCTGGGACATTTTTATCGCCAGGACAAACGAGAAACATTCTGATAATGCTGCAGCATATTTAGAGGCTCAACAGCTTAAAGCAAAAGAACAACAATTGCAAATGCAGCAGTTGCAATTAATGCGCCAAGCTCAGATGCAAAGAAGGGATCCTAATCATCCTCCCATTGGAACTCCTCCTCTAAATGCTATCACTACAGAAGGAATGCTAGGGCAATCTACTGCCACTGCTTTGGCTGCAAAAATGTATGAGGATCGGATGAAAAACTCTAACCCTATGGATACAGAGACATCATCCCAACCACTTTTAGATGCTAGAATGGCCCTTTTGAAATCAACAAATCATCCTGGTCAGATGGTTCAAGGAAATTCAGTAAGTGTGACATCAGCTTTGCAGCAAATGCAGGCTCGAACTCAACAAGCCCCTGATATCAAAAACGAAGTCAACATGGGAAACATGCAGAGATCCTTACCTGTGGATCCTTCAATTTATGGGCAGGGAGGATTGCAGTCAAAGTCTGGAATCACAAATGCAGGATTAAATCAGGGAGTTGGTGGTCTCACATTGAAAGGATGGCCTTTAACTGTACATGCACAAGGAAATATTGGCAATTCACAAGTGTATGGAGATATGGATCCACAACGATTAAGAGGATTAGCTAGAGGAGGTTTGAATGTGAAAGACGGTCAACCAATTGCAAACGATGGATCAATAGGTTCTCCAATGCAATCTACTTCATCTAAGAATAACCGAAAAAGGAAAGGGCCTACATCTTCAGGAGCTGCCAATAGTACTGGTACAGGAAATACACTTGGCCCTTCTAATTCTCAACCGTCAACTCCATCTATTCATACTCCTGGTGATGGTGTTGCTATGGCGGGCAACTTGCAGAATGTTGCTGGTGTATCCAAGGGTATGATGATGTATGGTACTGAAGGAGCAGGCGGTCTTGCATCTTCCACAAACCAGCTGGATGGCTTGGAACATTTTGGAGATGTTGGCTCCTTAGATGATAATGTGGAATCATTTCTCTCACAGGATGATGGTGATGGAAAGGACTTATTTGGGACGTTGAAACGGAACCCTGCCGAGCATGCTACAGATTCTTCAAAAGGCTTTTCCTTCAGTGAAGTTAGTTCTATACGCAAAAGCAATGGAAAAGTTGTTTGCTGTCATTTCTCTTCAGATGGGAAATTATTAGCCAGTGCTGGACATGACAAGAAGGTTGTTCTTTGGAACATGGAGACACTGAAAACGCAGAGCACGCCAGAGGAACACACTGTTATTATTGCTGACGTTCGCTTCAGACCAAATTCAACTCAGCTGGCAACATCTTCGTTTGATACAACTGTGCGGCTTTGGGATGCTGCTGATCCAAGCCTTTCTTTGCAGGCATATAGCGGTCATACTTCACATGTTGCATCCCTTGATTTCCACCCTAAGAAAAATGACCTTTTCTGTTCCTGTGATGATAACAATGAGATTCGCTTCTGGAATATTAGTCAATATTCTTGTACTCGTGGAGGATCTACACAGGTGAGGTTTCAGCCAAGGAGTGGACACCTTCTGGCCGCAGCATCTGGCAATGTTGTGTCTCTCTTTGATGTTGAGACTGACAGGCAAATGCACTCATTACAGGGACACTCTGGGGAGGTACATTGTGTATGCTGGGATACAAATGGAGATTATTTGGCATCTGTGAGTCAAGAATCTGTCAAAGTTTGGTCACTTGCCTCTGGTGATTGCATTCATGAACTTAATTCCAGTGGAAACATGTTTCATTCTTGTGTTTTTCACCCAAGTTACTCCAACCTCTTGGTTATCGGAGGATACCAGTCTTTGGAGCTATGGCACATGGCCGAAAACAAATGTATGACCATACCAGCTCATGAGGGTGTAATATCAGCCCTAGCACAATCACCTGTGACAGGGATGGTTGCTTCTGCCAGTCATGACAAGTCAGTAAAGATATGGAAATAA
Protein sequence

>Msa0113090

MAQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWDIFIARTNEKHSDNAAAYLEAQQLKAKEQQLQMQQLQLMRQAQMQRRDPNHPPIGTPPLNAITTEGMLGQSTATALAAKMYEDRMKNSNPMDTETSSQPLLDARMALLKSTNHPGQMVQGNSVSVTSALQQMQARTQQAPDIKNEVNMGNMQRSLPVDPSIYGQGGLQSKSGITNAGLNQGVGGLTLKGWPLTVHAQGNIGNSQVYGDMDPQRLRGLARGGLNVKDGQPIANDGSIGSPMQSTSSKNNRKRKGPTSSGAANSTGTGNTLGPSNSQPSTPSIHTPGDGVAMAGNLQNVAGVSKGMMMYGTEGAGGLASSTNQLDGLEHFGDVGSLDDNVESFLSQDDGDGKDLFGTLKRNPAEHATDSSKGFSFSEVSSIRKSNGKVVCCHFSSDGKLLASAGHDKKVVLWNMETLKTQSTPEEHTVIIADVRFRPNSTQLATSSFDTTVRLWDAADPSLSLQAYSGHTSHVASLDFHPKKNDLFCSCDDNNEIRFWNISQYSCTRGGSTQVRFQPRSGHLLAAASGNVVSLFDVETDRQMHSLQGHSGEVHCVCWDTNGDYLASVSQESVKVWSLASGDCIHELNSSGNMFHSCVFHPSYSNLLVIGGYQSLELWHMAENKCMTIPAHEGVISALAQSPVTGMVASASHDKSVKIWK*