AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0121700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121700 MtrunA17_Chr1g0181001 98.430 446 7 0 32 477 18 463 0.0 903
Msa0121700 MtrunA17_Chr8g0343641 40.187 107 62 2 351 456 543 648 9.40e-17 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0121700 AT2G37025.2 50.000 114 56 1 335 447 271 384 1.98e-30 122
Msa0121700 AT2G37025.3 50.000 114 56 1 335 447 271 384 1.98e-30 122
Msa0121700 AT2G37025.1 50.000 114 56 1 335 447 271 384 1.98e-30 122
Msa0121700 AT1G72650.1 45.652 92 49 1 351 442 530 620 9.38e-19 89.7
Msa0121700 AT1G72650.2 45.652 92 49 1 351 442 536 626 9.39e-19 89.7
Msa0121700 AT1G17460.1 29.741 232 96 5 245 413 327 554 6.57e-18 87.0
Msa0121700 AT1G17460.3 29.741 232 96 5 245 413 306 533 6.78e-18 87.0
Msa0121700 AT1G17460.2 29.741 232 96 5 245 413 347 574 9.12e-18 86.7

Find 114 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATCTTGTTGAAATTT+TGG 0.114851 1_3:+47783273 Msa0121700:three_prime_UTR
GAAAATAGTACCTCTTTCTT+TGG 0.210015 1_3:-47781726 None:intergenic
TAATTATGATGCTGTACTTA+TGG 0.215451 1_3:+47783467 Msa0121700:three_prime_UTR
AATGAAACATGATCATTTCT+AGG 0.222946 1_3:-47780151 None:intergenic
TCTGTATAACCGAAGTGATT+TGG 0.275056 1_3:+47783542 Msa0121700:three_prime_UTR
ACTGAAGGGGTTAGGCATTA+AGG 0.278001 1_3:-47783417 None:intergenic
GTGTAGTACAGGCTCTTAAA+AGG 0.294514 1_3:-47782809 None:intergenic
AATTATGATGCTGTACTTAT+GGG 0.315796 1_3:+47783468 Msa0121700:three_prime_UTR
ACTCGGCTAGCCACACTAAA+AGG 0.320293 1_3:-47783084 None:intergenic
GGATTTAGATTGTGTACTAT+TGG 0.323521 1_3:-47781262 None:intergenic
TTTGAATGACAAAGATGATT+TGG 0.323845 1_3:+47780676 Msa0121700:CDS
TCAGACTCTTCCGAGGAAAA+AGG 0.330555 1_3:-47782517 None:intergenic
TTGTTTCGTCGCTTTGGGTA+TGG 0.332970 1_3:-47783129 None:intergenic
GATTTAGATTGTGTACTATT+GGG 0.352272 1_3:-47781261 None:intergenic
CTGTATAACCGAAGTGATTT+GGG 0.355693 1_3:+47783543 Msa0121700:three_prime_UTR
CTCATCCAGAGATTTAATTT+CGG 0.364384 1_3:-47781283 None:intergenic
ATGTACTGTTAGGTCCTTGA+TGG 0.365380 1_3:+47780908 Msa0121700:intron
TTGTAAACTTGAGGAATCAT+TGG 0.382117 1_3:+47783372 Msa0121700:three_prime_UTR
CTTCCATTTCATCATCTTGA+AGG 0.382415 1_3:-47780108 None:intergenic
CTTGATGGATTCCTTGGAGA+TGG 0.383282 1_3:+47780923 Msa0121700:CDS
TAGAAATGATCATGTTTCAT+TGG 0.391808 1_3:+47780153 Msa0121700:CDS
TGCATGTGGAGGTTATTTCT+TGG 0.392226 1_3:+47781000 Msa0121700:CDS
TAGGTCCTTGATGGATTCCT+TGG 0.398304 1_3:+47780917 Msa0121700:intron
TGTTTCGTCGCTTTGGGTAT+GGG 0.398644 1_3:-47783128 None:intergenic
TGCTTATGAAGACTCGCCTT+TGG 0.398646 1_3:+47781158 Msa0121700:CDS
CATCTGCATGAGTTGAATAA+TGG 0.398801 1_3:+47781399 Msa0121700:CDS
TAAATCCGAAATTAAATCTC+TGG 0.403561 1_3:+47781278 Msa0121700:CDS
TACATGCAATCTACATTTGA+TGG 0.413497 1_3:-47781354 None:intergenic
GCATGTGGAGGTTATTTCTT+GGG 0.424530 1_3:+47781001 Msa0121700:CDS
ATTCCTTGGAGATGGATTCC+TGG 0.426741 1_3:+47780931 Msa0121700:CDS
CTCCCTTCAAGATGATGAAA+TGG 0.431701 1_3:+47780105 Msa0121700:CDS
AGTCATTCTCCAGGATTTAG+TGG 0.434512 1_3:+47781198 Msa0121700:CDS
TATACCTCTGAGTAGGCTTT+CGG 0.437182 1_3:-47781512 None:intergenic
TATACAGAAAATATATTTGA+AGG 0.437441 1_3:-47783527 None:intergenic
CCCTGACATCTGTGGGAGTT+CGG 0.439169 1_3:-47782702 None:intergenic
ACCGAACTCCCACAGATGTC+AGG 0.444681 1_3:+47782701 Msa0121700:CDS
AATGATCATGTTTCATTGGA+TGG 0.447117 1_3:+47780157 Msa0121700:CDS
AATAATGGTTATCCTTTAGC+TGG 0.452055 1_3:+47781414 Msa0121700:CDS
CACTAAAAGGTAAGATCCGC+GGG 0.452158 1_3:-47783071 None:intergenic
TTTCGGAATCTCTTCTCTCT+AGG 0.461041 1_3:-47781495 None:intergenic
ATTGACGGCATATCTCAATA+TGG 0.461167 1_3:+47782628 Msa0121700:CDS
ATGCTGTACTTATGGGTTAG+TGG 0.463108 1_3:+47783475 Msa0121700:three_prime_UTR
TAGTGTGGCTAGCCGAGTGC+TGG 0.464765 1_3:+47783089 Msa0121700:CDS
TCTACATTTGATGGTTGACT+TGG 0.468639 1_3:-47781345 None:intergenic
ATGATACACATGGTGTCTTC+AGG 0.468776 1_3:+47781316 Msa0121700:CDS
TAAGGATTGCAAACTTCTGC+AGG 0.471578 1_3:-47783399 None:intergenic
GGAATCTCTTCTCTCTAGGT+GGG 0.472128 1_3:-47781491 None:intergenic
GGCTAGCCGAGTGCTGGAAT+TGG 0.480997 1_3:+47783095 Msa0121700:CDS
CTACTGGTGTAAAACGTAAA+CGG 0.490582 1_3:+47781577 Msa0121700:CDS
CTCAATATGGAGTTGGTCGT+TGG 0.495896 1_3:+47782641 Msa0121700:CDS
AATTCAGAAAGTCATTCTCC+AGG 0.495964 1_3:+47781189 Msa0121700:CDS
GAAGTGACAAAGTTAATTGA+CGG 0.500151 1_3:+47782613 Msa0121700:CDS
GAAGAAAGAATCAAAGGATG+TGG 0.504028 1_3:+47782581 Msa0121700:CDS
CGGAATCTCTTCTCTCTAGG+TGG 0.508662 1_3:-47781492 None:intergenic
GCTGAATTTCTGTGTAGTAC+AGG 0.508716 1_3:-47782820 None:intergenic
GAAATAACCTCCACATGCAT+TGG 0.510672 1_3:-47780996 None:intergenic
TATGGTCCATCTAGTAGTCT+TGG 0.511541 1_3:+47783174 Msa0121700:CDS
TTCCATTTCATCATCTTGAA+GGG 0.518648 1_3:-47780107 None:intergenic
GGCATATCTCAATATGGAGT+TGG 0.522814 1_3:+47782634 Msa0121700:CDS
ATCACAATACTGAAGGGGTT+AGG 0.524670 1_3:-47783425 None:intergenic
GTTGACATCAATGATCTTGA+AGG 0.524785 1_3:+47780959 Msa0121700:CDS
CCACTACTAGACTCGTCGCT+TGG 0.525921 1_3:-47781657 None:intergenic
TGAAGACACCATGTGTATCA+TGG 0.526838 1_3:-47781314 None:intergenic
ATTTCATCATCTTGAAGGGA+GGG 0.528637 1_3:-47780103 None:intergenic
TAGTATATTGTCTTGTAAGA+AGG 0.534253 1_3:+47781437 Msa0121700:CDS
GTGCTACTTCCACTAAATCC+TGG 0.534846 1_3:-47781207 None:intergenic
ATACAGAAAATATATTTGAA+GGG 0.536441 1_3:-47783526 None:intergenic
AATTTCAAATTGTAAACTTG+AGG 0.538777 1_3:+47783363 Msa0121700:three_prime_UTR
ACAGAAATTCAGCATGAAAG+AGG 0.539273 1_3:+47782830 Msa0121700:CDS
AATTTGTCAGAGCTGAGTGT+TGG 0.541161 1_3:+47779629 Msa0121700:CDS
GACAATATACTACCAGCTAA+AGG 0.542357 1_3:-47781426 None:intergenic
CAAGAAGCATCCAAAGAAAG+AGG 0.542469 1_3:+47781716 Msa0121700:CDS
AGATGGACCATAGCTTTCAA+TGG 0.551522 1_3:-47783163 None:intergenic
TACAGAAAATATATTTGAAG+GGG 0.552233 1_3:-47783525 None:intergenic
TTTAGTGGAAGTAGCACTGT+TGG 0.554801 1_3:+47781213 Msa0121700:CDS
TGCTGTACTTATGGGTTAGT+GGG 0.555328 1_3:+47783476 Msa0121700:three_prime_UTR
CATTTCATCATCTTGAAGGG+AGG 0.558348 1_3:-47780104 None:intergenic
AGATTCACCATTGAAAGCTA+TGG 0.560358 1_3:+47783156 Msa0121700:CDS
AAGAAAATCACAATACTGAA+GGG 0.561026 1_3:-47783431 None:intergenic
AAGATCGAAGAAAGAATCAA+AGG 0.561345 1_3:+47782575 Msa0121700:CDS
TTCTGCTTCCCAAATCACTT+CGG 0.566383 1_3:-47783551 None:intergenic
CATTGATGTCAACATCATCC+AGG 0.573797 1_3:-47780949 None:intergenic
AGTGGAAGTAGCACTGTTGG+TGG 0.573972 1_3:+47781216 Msa0121700:CDS
TCTTCAATATACCTCTGAGT+AGG 0.580112 1_3:-47781519 None:intergenic
GTTTAGCCAATTCCAGCACT+CGG 0.584124 1_3:-47783101 None:intergenic
GTGGAAGTAGCACTGTTGGT+GGG 0.586298 1_3:+47781217 Msa0121700:CDS
TGTTGGAAAATGTGTCTGAT+GGG 0.587527 1_3:+47779646 Msa0121700:CDS
CAAAGATGATTTGGAACTAG+AGG 0.590374 1_3:+47780685 Msa0121700:CDS
CATCTCCAAGGAATCCATCA+AGG 0.593123 1_3:-47780922 None:intergenic
GTGTTGGAAAATGTGTCTGA+TGG 0.595688 1_3:+47779645 Msa0121700:CDS
GAATCTCTTCTCTCTAGGTG+GGG 0.598491 1_3:-47781490 None:intergenic
TACAGTACCCTGACATCTGT+GGG 0.600151 1_3:-47782709 None:intergenic
CAAGAAAATCACAATACTGA+AGG 0.602552 1_3:-47783432 None:intergenic
ATCATCTTTGTCATTCAAAG+CGG 0.620385 1_3:-47780672 None:intergenic
GAAGACACCATGTGTATCAT+GGG 0.623115 1_3:-47781313 None:intergenic
CCGAACTCCCACAGATGTCA+GGG 0.624929 1_3:+47782702 Msa0121700:CDS
TATGATTTATGCAGGACAAG+TGG 0.628551 1_3:+47782781 Msa0121700:intron
GTACAGTACCCTGACATCTG+TGG 0.628681 1_3:-47782710 None:intergenic
AGAAAATCACAATACTGAAG+GGG 0.638151 1_3:-47783430 None:intergenic
TTGGCAAAAGAAATTTACGT+AGG 0.641798 1_3:+47783193 Msa0121700:CDS
TTCTGCTTGTAAATCTACAG+AGG 0.644121 1_3:+47783334 Msa0121700:three_prime_UTR
CATCCAGGAATCCATCTCCA+AGG 0.645479 1_3:-47780934 None:intergenic
CCAAGCGACGAGTCTAGTAG+TGG 0.649826 1_3:+47781657 Msa0121700:CDS
ACACTAAAAGGTAAGATCCG+CGG 0.650416 1_3:-47783072 None:intergenic
TTCATCCTCAGACTCTTCCG+AGG 0.663673 1_3:-47782524 None:intergenic
GGGGATTGTTGAGATATGTA+CGG 0.667163 1_3:+47779666 Msa0121700:CDS
GTTGGAAAATGTGTCTGATG+GGG 0.691797 1_3:+47779647 Msa0121700:CDS
GTTCTCACAGAATATAACGA+TGG 0.693576 1_3:-47779599 None:intergenic
AAGGTTGAGATACTAGAACA+TGG 0.703668 1_3:+47781135 Msa0121700:CDS
ACAGTCACCCATGATACACA+TGG 0.714461 1_3:+47781306 Msa0121700:CDS
GATTCCGAAAGCCTACTCAG+AGG 0.733180 1_3:+47781508 Msa0121700:CDS
CTGGTGTAAAACGTAAACGG+CGG 0.772509 1_3:+47781580 Msa0121700:CDS
ACTAAAAGGTAAGATCCGCG+GGG 0.799147 1_3:-47783070 None:intergenic
AAAATGATGAGACTGCCCCG+CGG 0.836893 1_3:+47783055 Msa0121700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTTATTTATTAAATAGTAA+AGG - chr1_3:47779994-47780013 None:intergenic 10.0%
!! ATAAAATAAATTAACACAAA+TGG - chr1_3:47780299-47780318 None:intergenic 10.0%
!!! TTGTGTTAATTTATTTTATT+TGG + chr1_3:47780300-47780319 Msa0121700:intron 10.0%
!! TAGATAACTTATTATATTTA+TGG + chr1_3:47780502-47780521 Msa0121700:intron 10.0%
!!! AAAATAAATTTTATGAGAAA+TGG - chr1_3:47782989-47783008 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781850-47781869 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781850-47781869 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781850-47781869 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781850-47781869 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781850-47781869 None:intergenic 100.0%
!! ATCTAGTATATTGAAAATTA+AGG - chr1_3:47779889-47779908 None:intergenic 15.0%
!!! TACCTTTAAAATATAATGTT+TGG + chr1_3:47780478-47780497 Msa0121700:intron 15.0%
!!! AACCAAACATTATATTTTAA+AGG - chr1_3:47780483-47780502 None:intergenic 15.0%
!! ATAACTTATTATATTTATGG+TGG + chr1_3:47780505-47780524 Msa0121700:intron 15.0%
!! TGCATTAAATTTATTACTTA+TGG + chr1_3:47780778-47780797 Msa0121700:intron 15.0%
!!! TTCTCATAAAATTTATTTTG+AGG + chr1_3:47782990-47783009 Msa0121700:intron 15.0%
!! ATACAGAAAATATATTTGAA+GGG - chr1_3:47783529-47783548 None:intergenic 15.0%
!! TATACAGAAAATATATTTGA+AGG - chr1_3:47783530-47783549 None:intergenic 15.0%
!! TATGGATCATAGAATATAAT+GGG - chr1_3:47779731-47779750 None:intergenic 20.0%
!! ATATGGATCATAGAATATAA+TGG - chr1_3:47779732-47779751 None:intergenic 20.0%
!!! GCTTTTTTACATCATATATA+TGG - chr1_3:47779749-47779768 None:intergenic 20.0%
!!! AATCAAAAAGAACAACTTTT+AGG - chr1_3:47780233-47780252 None:intergenic 20.0%
!! CAAGTCTATTTATTAGTAAA+TGG + chr1_3:47780261-47780280 Msa0121700:intron 20.0%
!! ATAAGTTTAATAAAATGCTG+AGG + chr1_3:47780349-47780368 Msa0121700:intron 20.0%
!!! TCAATTCTTTAGTTTTTGTA+TGG - chr1_3:47781629-47781648 None:intergenic 20.0%
!! AGAAAATCTTCATTTACTAA+AGG - chr1_3:47781778-47781797 None:intergenic 20.0%
!!! TTTTTAATGGCAATACAAAA+GGG - chr1_3:47781820-47781839 None:intergenic 20.0%
!!! TTTTTTAATGGCAATACAAA+AGG - chr1_3:47781821-47781840 None:intergenic 20.0%
!!! GGGCTTTTTTTTTTTTTTAA+TGG - chr1_3:47781833-47781852 None:intergenic 20.0%
!!! CAATTTGTTTTATCAAACAA+CGG - chr1_3:47782465-47782484 None:intergenic 20.0%
!! ATATTTAGAAAACACAAAGT+TGG - chr1_3:47782764-47782783 None:intergenic 20.0%
!! TTTCTAAATATGATTTATGC+AGG + chr1_3:47782773-47782792 Msa0121700:intron 20.0%
!! AGTTAATGTAAACAATCATT+TGG + chr1_3:47783016-47783035 Msa0121700:intron 20.0%
!!! AAAGAATCTTGTTGAAATTT+TGG + chr1_3:47783273-47783292 Msa0121700:three_prime_UTR 20.0%
!! AATTTCAAATTGTAAACTTG+AGG + chr1_3:47783363-47783382 Msa0121700:three_prime_UTR 20.0%
!! TACAGAAAATATATTTGAAG+GGG - chr1_3:47783528-47783547 None:intergenic 20.0%
! ATGGATCATAGAATATAATG+GGG - chr1_3:47779730-47779749 None:intergenic 25.0%
! ATGATGTAAAAAAGCTGATT+AGG + chr1_3:47779754-47779773 Msa0121700:intron 25.0%
! CCAAACACTTAAATATGTTA+CGG - chr1_3:47779866-47779885 None:intergenic 25.0%
! AATGAAACATGATCATTTCT+AGG - chr1_3:47780154-47780173 None:intergenic 25.0%
! TAGAAATGATCATGTTTCAT+TGG + chr1_3:47780153-47780172 Msa0121700:CDS 25.0%
! TAATATTTGCTTTCATGCTT+TGG + chr1_3:47780555-47780574 Msa0121700:intron 25.0%
! TTTGAATGACAAAGATGATT+TGG + chr1_3:47780676-47780695 Msa0121700:CDS 25.0%
! CAGATTTAACTGAAAAATAC+AGG - chr1_3:47780760-47780779 None:intergenic 25.0%
! CTGATAAAATATGTACTGTT+AGG + chr1_3:47780898-47780917 Msa0121700:intron 25.0%
!! TTTTACTATGATGCTTTCAT+AGG + chr1_3:47781044-47781063 Msa0121700:intron 25.0%
! CAAATCAAAATCTGTAGATT+GGG - chr1_3:47781112-47781131 None:intergenic 25.0%
!! TCTGAATTTGAATTTTCCAA+AGG - chr1_3:47781177-47781196 None:intergenic 25.0%
! GATTTAGATTGTGTACTATT+GGG - chr1_3:47781264-47781283 None:intergenic 25.0%
! TAAATCCGAAATTAAATCTC+TGG + chr1_3:47781278-47781297 Msa0121700:CDS 25.0%
! TAGTATATTGTCTTGTAAGA+AGG + chr1_3:47781437-47781456 Msa0121700:CDS 25.0%
!!! AAAGAAAAAGTATCAACTAC+TGG + chr1_3:47781561-47781580 Msa0121700:CDS 25.0%
!!! AAGAGGTACTATTTTCTTTT+TGG + chr1_3:47781733-47781752 Msa0121700:intron 25.0%
!!! AGAGGTACTATTTTCTTTTT+GGG + chr1_3:47781734-47781753 Msa0121700:intron 25.0%
! TATAAATTCTGCAATTCTGA+AGG + chr1_3:47782257-47782276 Msa0121700:intron 25.0%
!!! TCTACAACTGATTTTGTAAT+TGG + chr1_3:47782280-47782299 Msa0121700:intron 25.0%
!!! AAGTTTTTGTTTTCTTCTGA+AGG + chr1_3:47782676-47782695 Msa0121700:CDS 25.0%
! ACAGAATAAAGTTTCAGATA+AGG - chr1_3:47782871-47782890 None:intergenic 25.0%
! ATCAAATCTTCACAAATCAT+AGG + chr1_3:47782893-47782912 Msa0121700:intron 25.0%
! ACTAATTACTTAATGTGACA+TGG + chr1_3:47782931-47782950 Msa0121700:intron 25.0%
! AAGAAAATCACAATACTGAA+GGG - chr1_3:47783434-47783453 None:intergenic 25.0%
! TAATTATGATGCTGTACTTA+TGG + chr1_3:47783467-47783486 Msa0121700:three_prime_UTR 25.0%
! AATTATGATGCTGTACTTAT+GGG + chr1_3:47783468-47783487 Msa0121700:three_prime_UTR 25.0%
TACGGTATATTAGTCATGTA+GGG + chr1_3:47779684-47779703 Msa0121700:intron 30.0%
AAAAAAGCTGATTAGGAACT+TGG + chr1_3:47779761-47779780 Msa0121700:intron 30.0%
CCGTAACATATTTAAGTGTT+TGG + chr1_3:47779863-47779882 Msa0121700:intron 30.0%
ATAAACTTCAAGTGTCCATA+TGG + chr1_3:47780008-47780027 Msa0121700:intron 30.0%
! GATCTCTTTCAAATTTTCCT+AGG + chr1_3:47780057-47780076 Msa0121700:intron 30.0%
TTCCATTTCATCATCTTGAA+GGG - chr1_3:47780110-47780129 None:intergenic 30.0%
AATGATCATGTTTCATTGGA+TGG + chr1_3:47780157-47780176 Msa0121700:CDS 30.0%
! AGAACAACTTTTAGGCATTT+GGG - chr1_3:47780225-47780244 None:intergenic 30.0%
! AAGAACAACTTTTAGGCATT+TGG - chr1_3:47780226-47780245 None:intergenic 30.0%
ATTGTTCATCAACAAGATAC+AGG - chr1_3:47780326-47780345 None:intergenic 30.0%
! TGTATCTTGTTGATGAACAA+TGG + chr1_3:47780325-47780344 Msa0121700:intron 30.0%
TAAAATGCTGAGGTGAAAAA+TGG + chr1_3:47780359-47780378 Msa0121700:intron 30.0%
GATATAACATACATGCAAAC+AGG - chr1_3:47780590-47780609 None:intergenic 30.0%
ATCATCTTTGTCATTCAAAG+CGG - chr1_3:47780675-47780694 None:intergenic 30.0%
CATGCAATTGACATTAGATT+AGG - chr1_3:47780822-47780841 None:intergenic 30.0%
!! CAGCAATTTAAACGGATTAA+GGG - chr1_3:47780851-47780870 None:intergenic 30.0%
!! ACAGCAATTTAAACGGATTA+AGG - chr1_3:47780852-47780871 None:intergenic 30.0%
AAAGGACACAGCAATTTAAA+CGG - chr1_3:47780859-47780878 None:intergenic 30.0%
TATATTCACAACCACACAAA+AGG - chr1_3:47780877-47780896 None:intergenic 30.0%
CCAAATCAAAATCTGTAGAT+TGG - chr1_3:47781113-47781132 None:intergenic 30.0%
!!! CCAATCTACAGATTTTGATT+TGG + chr1_3:47781110-47781129 Msa0121700:intron 30.0%
GGATTTAGATTGTGTACTAT+TGG - chr1_3:47781265-47781284 None:intergenic 30.0%
! CTCATCCAGAGATTTAATTT+CGG - chr1_3:47781286-47781305 None:intergenic 30.0%
TACATGCAATCTACATTTGA+TGG - chr1_3:47781357-47781376 None:intergenic 30.0%
AATAATGGTTATCCTTTAGC+TGG + chr1_3:47781414-47781433 Msa0121700:CDS 30.0%
GAAAATAGTACCTCTTTCTT+TGG - chr1_3:47781729-47781748 None:intergenic 30.0%
!! GAGGTACTATTTTCTTTTTG+GGG + chr1_3:47781735-47781754 Msa0121700:intron 30.0%
ATCATTTATCATCTTCATCG+TGG + chr1_3:47782175-47782194 Msa0121700:intron 30.0%
AAGAACCTAATATTCATGTC+TGG + chr1_3:47782418-47782437 Msa0121700:intron 30.0%
AAGATCGAAGAAAGAATCAA+AGG + chr1_3:47782575-47782594 Msa0121700:CDS 30.0%
GAAGTGACAAAGTTAATTGA+CGG + chr1_3:47782613-47782632 Msa0121700:CDS 30.0%
TTAGAAAACACAAAGTTGGA+CGG - chr1_3:47782760-47782779 None:intergenic 30.0%
! AACAATCATTTGGTGATTGT+AGG + chr1_3:47783026-47783045 Msa0121700:intron 30.0%
TTGGCAAAAGAAATTTACGT+AGG + chr1_3:47783193-47783212 Msa0121700:CDS 30.0%
!! CAACAAGATTCTTTTGACTA+TGG - chr1_3:47783267-47783286 None:intergenic 30.0%
TTGTAAACTTGAGGAATCAT+TGG + chr1_3:47783372-47783391 Msa0121700:three_prime_UTR 30.0%
AGAAAATCACAATACTGAAG+GGG - chr1_3:47783433-47783452 None:intergenic 30.0%
CAAGAAAATCACAATACTGA+AGG - chr1_3:47783435-47783454 None:intergenic 30.0%
! CTTCAGTATTGTGATTTTCT+TGG + chr1_3:47783433-47783452 Msa0121700:three_prime_UTR 30.0%
GTTCTCACAGAATATAACGA+TGG - chr1_3:47779602-47779621 None:intergenic 35.0%
TGTTGGAAAATGTGTCTGAT+GGG + chr1_3:47779646-47779665 Msa0121700:CDS 35.0%
GTACGGTATATTAGTCATGT+AGG + chr1_3:47779683-47779702 Msa0121700:intron 35.0%
GTCAAAATATGAAGCTTGTG+AGG - chr1_3:47779912-47779931 None:intergenic 35.0%
GACATAAATCTACACAAGTG+TGG - chr1_3:47779962-47779981 None:intergenic 35.0%
TTCAAGTGTCCATATGGTAT+CGG + chr1_3:47780014-47780033 Msa0121700:intron 35.0%
ATGCTTTAACCGATACCATA+TGG - chr1_3:47780026-47780045 None:intergenic 35.0%
ATTTCATCATCTTGAAGGGA+GGG - chr1_3:47780106-47780125 None:intergenic 35.0%
CTTCCATTTCATCATCTTGA+AGG - chr1_3:47780111-47780130 None:intergenic 35.0%
TATCTCCATCAACAATACTC+GGG - chr1_3:47780406-47780425 None:intergenic 35.0%
CTATCTCCATCAACAATACT+CGG - chr1_3:47780407-47780426 None:intergenic 35.0%
! TATTGTTGATGGAGATAGCT+AGG + chr1_3:47780409-47780428 Msa0121700:intron 35.0%
! CAAAGATGATTTGGAACTAG+AGG + chr1_3:47780685-47780704 Msa0121700:CDS 35.0%
!! TAGAGGTACTTGTCTAAACT+TGG + chr1_3:47780702-47780721 Msa0121700:intron 35.0%
TTGTCTAAACTTGGTTACTG+TGG + chr1_3:47780711-47780730 Msa0121700:intron 35.0%
TGTCTAAACTTGGTTACTGT+GGG + chr1_3:47780712-47780731 Msa0121700:intron 35.0%
TTGACATTAGATTAGGCACA+AGG - chr1_3:47780815-47780834 None:intergenic 35.0%
GTTGACATCAATGATCTTGA+AGG + chr1_3:47780959-47780978 Msa0121700:CDS 35.0%
!!! TACAGATTTTGATTTGGCGA+AGG + chr1_3:47781116-47781135 Msa0121700:intron 35.0%
AAGGTTGAGATACTAGAACA+TGG + chr1_3:47781135-47781154 Msa0121700:CDS 35.0%
AATTCAGAAAGTCATTCTCC+AGG + chr1_3:47781189-47781208 Msa0121700:CDS 35.0%
! TCTACATTTGATGGTTGACT+TGG - chr1_3:47781348-47781367 None:intergenic 35.0%
! CATCTGCATGAGTTGAATAA+TGG + chr1_3:47781399-47781418 Msa0121700:CDS 35.0%
GACAATATACTACCAGCTAA+AGG - chr1_3:47781429-47781448 None:intergenic 35.0%
TCTTCAATATACCTCTGAGT+AGG - chr1_3:47781522-47781541 None:intergenic 35.0%
CTACTGGTGTAAAACGTAAA+CGG + chr1_3:47781577-47781596 Msa0121700:CDS 35.0%
AGTCATTCGACTAGATTTAC+AGG - chr1_3:47782026-47782045 None:intergenic 35.0%
GCATAACGAAAGCAAATTCA+TGG - chr1_3:47782093-47782112 None:intergenic 35.0%
GCAACAGAAAATCATGTACA+AGG - chr1_3:47782152-47782171 None:intergenic 35.0%
! TTGGACAAGTTGAAACGAAA+TGG + chr1_3:47782299-47782318 Msa0121700:intron 35.0%
GTTGAAACGAAATGGTTACA+TGG + chr1_3:47782307-47782326 Msa0121700:intron 35.0%
GAACATTTGACACCAAAAAG+AGG + chr1_3:47782544-47782563 Msa0121700:CDS 35.0%
! TCTTTTGATCTGCCTCTTTT+TGG - chr1_3:47782559-47782578 None:intergenic 35.0%
GAAGAAAGAATCAAAGGATG+TGG + chr1_3:47782581-47782600 Msa0121700:CDS 35.0%
ATTGACGGCATATCTCAATA+TGG + chr1_3:47782628-47782647 Msa0121700:CDS 35.0%
TATGATTTATGCAGGACAAG+TGG + chr1_3:47782781-47782800 Msa0121700:intron 35.0%
ACAGAAATTCAGCATGAAAG+AGG + chr1_3:47782830-47782849 Msa0121700:CDS 35.0%
CAAATCATAGGAACTTCAGT+TGG + chr1_3:47782905-47782924 Msa0121700:intron 35.0%
!! TCTTTTTGTTTCGTCGCTTT+GGG - chr1_3:47783137-47783156 None:intergenic 35.0%
AGATTCACCATTGAAAGCTA+TGG + chr1_3:47783156-47783175 Msa0121700:CDS 35.0%
! ATTCACTGGACTTTTACACA+TGG - chr1_3:47783244-47783263 None:intergenic 35.0%
!! TCTTTTGACTATGGATTCAC+TGG - chr1_3:47783258-47783277 None:intergenic 35.0%
TTCTGCTTGTAAATCTACAG+AGG + chr1_3:47783334-47783353 Msa0121700:three_prime_UTR 35.0%
! CAGTATTGTGATTTTCTTGG+TGG + chr1_3:47783436-47783455 Msa0121700:three_prime_UTR 35.0%
TCTGTATAACCGAAGTGATT+TGG + chr1_3:47783542-47783561 Msa0121700:three_prime_UTR 35.0%
CTGTATAACCGAAGTGATTT+GGG + chr1_3:47783543-47783562 Msa0121700:three_prime_UTR 35.0%
AATTTGTCAGAGCTGAGTGT+TGG + chr1_3:47779629-47779648 Msa0121700:CDS 40.0%
GTGTTGGAAAATGTGTCTGA+TGG + chr1_3:47779645-47779664 Msa0121700:CDS 40.0%
GTTGGAAAATGTGTCTGATG+GGG + chr1_3:47779647-47779666 Msa0121700:CDS 40.0%
GGGGATTGTTGAGATATGTA+CGG + chr1_3:47779666-47779685 Msa0121700:CDS 40.0%
! TTTTCCACTTTCCACTAGGT+GGG + chr1_3:47779816-47779835 Msa0121700:intron 40.0%
ATGTAATCAATCCCACCTAG+TGG - chr1_3:47779830-47779849 None:intergenic 40.0%
ACTAGGTGGGATTGATTACA+TGG + chr1_3:47779829-47779848 Msa0121700:intron 40.0%
TGATTCATCAAGCTGAACCT+AGG - chr1_3:47780077-47780096 None:intergenic 40.0%
CATTTCATCATCTTGAAGGG+AGG - chr1_3:47780107-47780126 None:intergenic 40.0%
CTCCCTTCAAGATGATGAAA+TGG + chr1_3:47780105-47780124 Msa0121700:CDS 40.0%
!! TATGGTGGATAAAGCTGTGT+TGG + chr1_3:47780520-47780539 Msa0121700:intron 40.0%
CTAGTGTGCTTACATTCATC+AGG + chr1_3:47780632-47780651 Msa0121700:intron 40.0%
GTCTAAACTTGGTTACTGTG+GGG + chr1_3:47780713-47780732 Msa0121700:intron 40.0%
TCTAAACTTGGTTACTGTGG+GGG + chr1_3:47780714-47780733 Msa0121700:intron 40.0%
! AATTGCTGTGTCCTTTTGTG+TGG + chr1_3:47780863-47780882 Msa0121700:intron 40.0%
ATGTACTGTTAGGTCCTTGA+TGG + chr1_3:47780908-47780927 Msa0121700:intron 40.0%
CATTGATGTCAACATCATCC+AGG - chr1_3:47780952-47780971 None:intergenic 40.0%
! GATGTTTTCTCCAATGCATG+TGG + chr1_3:47780986-47781005 Msa0121700:CDS 40.0%
GAAATAACCTCCACATGCAT+TGG - chr1_3:47780999-47781018 None:intergenic 40.0%
!! TGCATGTGGAGGTTATTTCT+TGG + chr1_3:47781000-47781019 Msa0121700:CDS 40.0%
!! GCATGTGGAGGTTATTTCTT+GGG + chr1_3:47781001-47781020 Msa0121700:CDS 40.0%
AGTCATTCTCCAGGATTTAG+TGG + chr1_3:47781198-47781217 Msa0121700:CDS 40.0%
TTTAGTGGAAGTAGCACTGT+TGG + chr1_3:47781213-47781232 Msa0121700:CDS 40.0%
GAAGACACCATGTGTATCAT+GGG - chr1_3:47781316-47781335 None:intergenic 40.0%
TGAAGACACCATGTGTATCA+TGG - chr1_3:47781317-47781336 None:intergenic 40.0%
ATGATACACATGGTGTCTTC+AGG + chr1_3:47781316-47781335 Msa0121700:CDS 40.0%
TTTCGGAATCTCTTCTCTCT+AGG - chr1_3:47781498-47781517 None:intergenic 40.0%
TATACCTCTGAGTAGGCTTT+CGG - chr1_3:47781515-47781534 None:intergenic 40.0%
!! CAAGAAGCATCCAAAGAAAG+AGG + chr1_3:47781716-47781735 Msa0121700:CDS 40.0%
! GTTTTACGTTTTCCATGCTC+TGG + chr1_3:47781922-47781941 Msa0121700:intron 40.0%
AAATCATGTACAAGGAAGCC+AGG - chr1_3:47782144-47782163 None:intergenic 40.0%
GCAGACCAGACATGAATATT+AGG - chr1_3:47782426-47782445 None:intergenic 40.0%
! TGACTATGAGCCTTTTTCCT+CGG + chr1_3:47782507-47782526 Msa0121700:CDS 40.0%
GGCATATCTCAATATGGAGT+TGG + chr1_3:47782634-47782653 Msa0121700:CDS 40.0%
GTGTAGTACAGGCTCTTAAA+AGG - chr1_3:47782812-47782831 None:intergenic 40.0%
GCTGAATTTCTGTGTAGTAC+AGG - chr1_3:47782823-47782842 None:intergenic 40.0%
ACACTAAAAGGTAAGATCCG+CGG - chr1_3:47783075-47783094 None:intergenic 40.0%
!! CTCTTTTTGTTTCGTCGCTT+TGG - chr1_3:47783138-47783157 None:intergenic 40.0%
AGATGGACCATAGCTTTCAA+TGG - chr1_3:47783166-47783185 None:intergenic 40.0%
TATGGTCCATCTAGTAGTCT+TGG + chr1_3:47783174-47783193 Msa0121700:CDS 40.0%
! CTTTTGCCAAGACTACTAGA+TGG - chr1_3:47783183-47783202 None:intergenic 40.0%
TAAGGATTGCAAACTTCTGC+AGG - chr1_3:47783402-47783421 None:intergenic 40.0%
ATCACAATACTGAAGGGGTT+AGG - chr1_3:47783428-47783447 None:intergenic 40.0%
!! ATGCTGTACTTATGGGTTAG+TGG + chr1_3:47783475-47783494 Msa0121700:three_prime_UTR 40.0%
!! TGCTGTACTTATGGGTTAGT+GGG + chr1_3:47783476-47783495 Msa0121700:three_prime_UTR 40.0%
TTCTGCTTCCCAAATCACTT+CGG - chr1_3:47783554-47783573 None:intergenic 40.0%
! AGGCTTGGTAGTAGTTGTTG+TGG - chr1_3:47779797-47779816 None:intergenic 45.0%
AGTGGAAAGTGGAAAAGGCT+TGG - chr1_3:47779812-47779831 None:intergenic 45.0%
! AGCCTTTTCCACTTTCCACT+AGG + chr1_3:47779812-47779831 Msa0121700:intron 45.0%
CACCTAGTGGAAAGTGGAAA+AGG - chr1_3:47779817-47779836 None:intergenic 45.0%
! CTTTTCCACTTTCCACTAGG+TGG + chr1_3:47779815-47779834 Msa0121700:intron 45.0%
!! TAGGTCCTTGATGGATTCCT+TGG + chr1_3:47780917-47780936 Msa0121700:intron 45.0%
CATCTCCAAGGAATCCATCA+AGG - chr1_3:47780925-47780944 None:intergenic 45.0%
!! CTTGATGGATTCCTTGGAGA+TGG + chr1_3:47780923-47780942 Msa0121700:CDS 45.0%
! ATTCCTTGGAGATGGATTCC+TGG + chr1_3:47780931-47780950 Msa0121700:CDS 45.0%
! GTTTTCTCCAATGCATGTGG+AGG + chr1_3:47780989-47781008 Msa0121700:CDS 45.0%
!! GTGGAGGTTATTTCTTGGGT+AGG + chr1_3:47781005-47781024 Msa0121700:intron 45.0%
TGCTTATGAAGACTCGCCTT+TGG + chr1_3:47781158-47781177 Msa0121700:CDS 45.0%
!! GTGCTACTTCCACTAAATCC+TGG - chr1_3:47781210-47781229 None:intergenic 45.0%
ACAGTCACCCATGATACACA+TGG + chr1_3:47781306-47781325 Msa0121700:CDS 45.0%
GAATCTCTTCTCTCTAGGTG+GGG - chr1_3:47781493-47781512 None:intergenic 45.0%
GGAATCTCTTCTCTCTAGGT+GGG - chr1_3:47781494-47781513 None:intergenic 45.0%
CTGGTGTAAAACGTAAACGG+CGG + chr1_3:47781580-47781599 Msa0121700:CDS 45.0%
TCTCCATCCAACTACAAGAG+GGG - chr1_3:47781876-47781895 None:intergenic 45.0%
CTCTCCATCCAACTACAAGA+GGG - chr1_3:47781877-47781896 None:intergenic 45.0%
ACTCTCCATCCAACTACAAG+AGG - chr1_3:47781878-47781897 None:intergenic 45.0%
!! CGTTTTCCATGCTCTGGTTT+CGG + chr1_3:47781928-47781947 Msa0121700:intron 45.0%
AAGTATCCGAAACCAGAGCA+TGG - chr1_3:47781937-47781956 None:intergenic 45.0%
TCAGACTCTTCCGAGGAAAA+AGG - chr1_3:47782520-47782539 None:intergenic 45.0%
! TTTTTCCTCGGAAGAGTCTG+AGG + chr1_3:47782519-47782538 Msa0121700:CDS 45.0%
! CTCAATATGGAGTTGGTCGT+TGG + chr1_3:47782641-47782660 Msa0121700:CDS 45.0%
TACAGTACCCTGACATCTGT+GGG - chr1_3:47782712-47782731 None:intergenic 45.0%
ACTAAAAGGTAAGATCCGCG+GGG - chr1_3:47783073-47783092 None:intergenic 45.0%
CACTAAAAGGTAAGATCCGC+GGG - chr1_3:47783074-47783093 None:intergenic 45.0%
! GCGGATCTTACCTTTTAGTG+TGG + chr1_3:47783074-47783093 Msa0121700:CDS 45.0%
GTTTAGCCAATTCCAGCACT+CGG - chr1_3:47783104-47783123 None:intergenic 45.0%
! TGTTTCGTCGCTTTGGGTAT+GGG - chr1_3:47783131-47783150 None:intergenic 45.0%
! TTGTTTCGTCGCTTTGGGTA+TGG - chr1_3:47783132-47783151 None:intergenic 45.0%
ACTGAAGGGGTTAGGCATTA+AGG - chr1_3:47783420-47783439 None:intergenic 45.0%
CAATCCCACCTAGTGGAAAG+TGG - chr1_3:47779823-47779842 None:intergenic 50.0%
! GAGTGCCCGAGTATTGTTGA+TGG + chr1_3:47780398-47780417 Msa0121700:intron 50.0%
CATCCAGGAATCCATCTCCA+AGG - chr1_3:47780937-47780956 None:intergenic 50.0%
AGTGGAAGTAGCACTGTTGG+TGG + chr1_3:47781216-47781235 Msa0121700:CDS 50.0%
GTGGAAGTAGCACTGTTGGT+GGG + chr1_3:47781217-47781236 Msa0121700:CDS 50.0%
CGGAATCTCTTCTCTCTAGG+TGG - chr1_3:47781495-47781514 None:intergenic 50.0%
GATTCCGAAAGCCTACTCAG+AGG + chr1_3:47781508-47781527 Msa0121700:CDS 50.0%
TCCATCCAACTACAAGAGGG+GGG - chr1_3:47781874-47781893 None:intergenic 50.0%
CTCCATCCAACTACAAGAGG+GGG - chr1_3:47781875-47781894 None:intergenic 50.0%
CCGTTCAAGCAAAGAGAGGA+GGG - chr1_3:47782118-47782137 None:intergenic 50.0%
CCCTCCTCTCTTTGCTTGAA+CGG + chr1_3:47782115-47782134 Msa0121700:intron 50.0%
CCTCCTCTCTTTGCTTGAAC+GGG + chr1_3:47782116-47782135 Msa0121700:intron 50.0%
CTCCTCTCTTTGCTTGAACG+GGG + chr1_3:47782117-47782136 Msa0121700:intron 50.0%
TCCTCTCTTTGCTTGAACGG+GGG + chr1_3:47782118-47782137 Msa0121700:intron 50.0%
TTCATCCTCAGACTCTTCCG+AGG - chr1_3:47782527-47782546 None:intergenic 50.0%
GTACAGTACCCTGACATCTG+TGG - chr1_3:47782713-47782732 None:intergenic 50.0%
AAAATGATGAGACTGCCCCG+CGG + chr1_3:47783055-47783074 Msa0121700:CDS 50.0%
! ACTCGGCTAGCCACACTAAA+AGG - chr1_3:47783087-47783106 None:intergenic 50.0%
CCACTACTAGACTCGTCGCT+TGG - chr1_3:47781660-47781679 None:intergenic 55.0%
CCAAGCGACGAGTCTAGTAG+TGG + chr1_3:47781657-47781676 Msa0121700:CDS 55.0%
ATCCAACTACAAGAGGGGGG+GGG - chr1_3:47781871-47781890 None:intergenic 55.0%
CATCCAACTACAAGAGGGGG+GGG - chr1_3:47781872-47781891 None:intergenic 55.0%
CCATCCAACTACAAGAGGGG+GGG - chr1_3:47781873-47781892 None:intergenic 55.0%
CCCGTTCAAGCAAAGAGAGG+AGG - chr1_3:47782119-47782138 None:intergenic 55.0%
ACCGAACTCCCACAGATGTC+AGG + chr1_3:47782701-47782720 Msa0121700:CDS 55.0%
CCCTGACATCTGTGGGAGTT+CGG - chr1_3:47782705-47782724 None:intergenic 55.0%
CCGAACTCCCACAGATGTCA+GGG + chr1_3:47782702-47782721 Msa0121700:CDS 55.0%
TCCAACTACAAGAGGGGGGG+GGG - chr1_3:47781870-47781889 None:intergenic 60.0%
CCCCCCCTCTTGTAGTTGGA+TGG + chr1_3:47781870-47781889 Msa0121700:intron 60.0%
GCCCCCGTTCAAGCAAAGAG+AGG - chr1_3:47782122-47782141 None:intergenic 60.0%
TCTTTGCTTGAACGGGGGCC+TGG + chr1_3:47782123-47782142 Msa0121700:intron 60.0%
! TAGTGTGGCTAGCCGAGTGC+TGG + chr1_3:47783089-47783108 Msa0121700:CDS 60.0%
!! GGCTAGCCGAGTGCTGGAAT+TGG + chr1_3:47783095-47783114 Msa0121700:CDS 60.0%
AACTACAAGAGGGGGGGGGG+GGG - chr1_3:47781867-47781886 None:intergenic 65.0%
CAACTACAAGAGGGGGGGGG+GGG - chr1_3:47781868-47781887 None:intergenic 65.0%
CCAACTACAAGAGGGGGGGG+GGG - chr1_3:47781869-47781888 None:intergenic 65.0%
ACTACAAGAGGGGGGGGGGG+GGG - chr1_3:47781866-47781885 None:intergenic 70.0%
CCCCCCCCCCCTCTTGTAGT+TGG + chr1_3:47781866-47781885 Msa0121700:intron 70.0%
TACAAGAGGGGGGGGGGGGG+GGG - chr1_3:47781864-47781883 None:intergenic 75.0%
CTACAAGAGGGGGGGGGGGG+GGG - chr1_3:47781865-47781884 None:intergenic 75.0%
! ACAAGAGGGGGGGGGGGGGG+GGG - chr1_3:47781863-47781882 None:intergenic 80.0%
! AAGAGGGGGGGGGGGGGGGG+GGG - chr1_3:47781861-47781880 None:intergenic 85.0%
! CAAGAGGGGGGGGGGGGGGG+GGG - chr1_3:47781862-47781881 None:intergenic 85.0%
! AGAGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781860-47781879 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781858-47781877 None:intergenic 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG - chr1_3:47781859-47781878 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 47779595 47783585 47779595 ID=Msa0121700;Name=Msa0121700
chr1_3 mRNA 47779595 47783585 47779595 ID=Msa0121700-mRNA-1;Parent=Msa0121700;Name=Msa0121700-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.85|0.87|0.87|1|1|8|355|477
chr1_3 exon 47779595 47779687 47779595 ID=Msa0121700-mRNA-1:exon:14396;Parent=Msa0121700-mRNA-1
chr1_3 exon 47780079 47780178 47780079 ID=Msa0121700-mRNA-1:exon:14397;Parent=Msa0121700-mRNA-1
chr1_3 exon 47780654 47780706 47780654 ID=Msa0121700-mRNA-1:exon:14398;Parent=Msa0121700-mRNA-1
chr1_3 exon 47780920 47781022 47780920 ID=Msa0121700-mRNA-1:exon:14399;Parent=Msa0121700-mRNA-1
chr1_3 exon 47781121 47781737 47781121 ID=Msa0121700-mRNA-1:exon:14400;Parent=Msa0121700-mRNA-1
chr1_3 exon 47782496 47782723 47782496 ID=Msa0121700-mRNA-1:exon:14401;Parent=Msa0121700-mRNA-1
chr1_3 exon 47782795 47782851 47782795 ID=Msa0121700-mRNA-1:exon:14402;Parent=Msa0121700-mRNA-1
chr1_3 exon 47783048 47783585 47783048 ID=Msa0121700-mRNA-1:exon:14403;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47779595 47779687 47779595 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47780079 47780178 47780079 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47780654 47780706 47780654 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47780920 47781022 47780920 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47781121 47781737 47781121 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47782496 47782723 47782496 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47782795 47782851 47782795 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 CDS 47783048 47783230 47783048 ID=Msa0121700-mRNA-1:cds;Parent=Msa0121700-mRNA-1
chr1_3 three_prime_UTR 47783231 47783585 47783231 ID=Msa0121700-mRNA-1:three_prime_utr;Parent=Msa0121700-mRNA-1
Gene Sequence

>Msa0121700

ATGACCATCGTTATATTCTGTGAGAACTTCACTCAATTTGTCAGAGCTGAGTGTTGGAAAATGTGTCTGATGGGGATTGTTGAGATATGTACGGTTCAGCTTGATGAATCATACGTGCCCTCCCTTCAAGATGATGAAATGGAAGTTGAGCATTTGCTTGAAGAACCTAGAAATGATCATGTTTCATTGGATGGCACTTTAACTTCTCATACCGCTTTGAATGACAAAGATGATTTGGAACTAGAGGTCCTTGATGGATTCCTTGGAGATGGATTCCTGGATGATGTTGACATCAATGATCTTGAAGGAACTGATGTTTTCTCCAATGCATGTGGAGGTTATTTCTTGGATTTTGATTTGGCGAAGGTTGAGATACTAGAACATGGTGCTTATGAAGACTCGCCTTTGGAAAATTCAAATTCAGAAAGTCATTCTCCAGGATTTAGTGGAAGTAGCACTGTTGGTGGGATATCAGAATCAACAAAAGCACCCAATAGTACACAATCTAAATCCGAAATTAAATCTCTGGATGAGACAGTCACCCATGATACACATGGTGTCTTCAGGAACAATCCAAGTCAACCATCAAATGTAGATTGCATGTACAACATTTCACTTGATATACAGCATCTGCATGAGTTGAATAATGGTTATCCTTTAGCTGGTAGTATATTGTCTTGTAAGAAGGAAAATGTTACTGTTGAACAATGTCAATCTGCCCCACCTAGAGAGAAGAGATTCCGAAAGCCTACTCAGAGGTATATTGAAGAATCTTCAAATTTGAAGTCAAAAGAAAAAGTATCAACTACTGGTGTAAAACGTAAACGGCGGACTGTGTCATTAAGCAATGAGTTCCATACAAAAACTAAAGAATTGAAAGATATTCCAAGCGACGAGTCTAGTAGTGGTAATAGTGATGTGACGCTTTCTGAGTTGCAACACTGCAAGAAGCATCCAAAGAAAGAGAAGCTCGAGTATGACTATGAGCCTTTTTCCTCGGAAGAGTCTGAGGATGAACATTTGACACCAAAAAGAGGCAGATCAAAAGATCGAAGAAAGAATCAAAGGATGTGGACAGTCTCTGAAGTGACAAAGTTAATTGACGGCATATCTCAATATGGAGTTGGTCGTTGGACTGATATACAGAAGTTTTTGTTTTCTTCTGAAGGTTACCGAACTCCCACAGATGTCAGGGACAAGTGGCGTAACCTTTTAAGAGCCTGTACTACACAGAAATTCAGCATGAAAGAGGATGAGCAAAATGATGAGACTGCCCCGCGGATCTTACCTTTTAGTGTGGCTAGCCGAGTGCTGGAATTGGCTAAACTTCACCCATACCCAAAGCGACGAAACAAAAAGAGATTCACCATTGAAAGCTATGGTCCATCTAGTAGTCTTGGCAAAAGAAATTTACGTAGGAAGAAGTGTACTTAG
Protein sequence

>Msa0121700

MTIVIFCENFTQFVRAECWKMCLMGIVEICTVQLDESYVPSLQDDEMEVEHLLEEPRNDHVSLDGTLTSHTALNDKDDLELEVLDGFLGDGFLDDVDINDLEGTDVFSNACGGYFLDFDLAKVEILEHGAYEDSPLENSNSESHSPGFSGSSTVGGISESTKAPNSTQSKSEIKSLDETVTHDTHGVFRNNPSQPSNVDCMYNISLDIQHLHELNNGYPLAGSILSCKKENVTVEQCQSAPPREKRFRKPTQRYIEESSNLKSKEKVSTTGVKRKRRTVSLSNEFHTKTKELKDIPSDESSSGNSDVTLSELQHCKKHPKKEKLEYDYEPFSSEESEDEHLTPKRGRSKDRRKNQRMWTVSEVTKLIDGISQYGVGRWTDIQKFLFSSEGYRTPTDVRDKWRNLLRACTTQKFSMKEDEQNDETAPRILPFSVASRVLELAKLHPYPKRRNKKRFTIESYGPSSSLGKRNLRRKKCT*