Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127920 | AES61616.2 | 82.222 | 495 | 16 | 4 | 1 | 473 | 1 | 445 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127920 | sp|Q8VZL6|SWC4_ARATH | 53.233 | 464 | 137 | 11 | 2 | 447 | 5 | 406 | 1.42e-152 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127920 | G7ICU5 | 82.222 | 495 | 16 | 4 | 1 | 473 | 1 | 445 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0127920 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127920 | MtrunA17_Chr1g0194351 | 85.906 | 447 | 13 | 3 | 1 | 447 | 1 | 397 | 0.0 | 760 |
| Msa0127920 | MtrunA17_Chr7g0270251 | 61.339 | 463 | 101 | 7 | 1 | 447 | 1 | 401 | 0.0 | 534 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127920 | AT2G47210.3 | 53.233 | 464 | 137 | 11 | 2 | 447 | 5 | 406 | 1.45e-153 | 444 |
| Msa0127920 | AT2G47210.1 | 53.233 | 464 | 137 | 11 | 2 | 447 | 5 | 406 | 1.45e-153 | 444 |
| Msa0127920 | AT2G47210.2 | 53.233 | 464 | 137 | 11 | 2 | 447 | 5 | 406 | 1.45e-153 | 444 |
Find 143 sgRNAs with CRISPR-Local
Find 558 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATCCATGGAAATATTT+AGG | 0.080842 | 1_3:+57558449 | None:intergenic |
| CATAAGCATCTGCAAATTTC+TGG | 0.180541 | 1_3:+57550778 | None:intergenic |
| ATTAGGATTTGTATATAATT+AGG | 0.201527 | 1_3:-57550820 | Msa0127920:three_prime_UTR |
| TGTATTTAGCTAAGCTAATA+AGG | 0.227370 | 1_3:-57558759 | Msa0127920:five_prime_UTR |
| ATATATAGTTTCGGGCTTAA+AGG | 0.229525 | 1_3:+57550740 | None:intergenic |
| CACATCCATGGAAATATTTA+GGG | 0.243709 | 1_3:+57558450 | None:intergenic |
| CAGCAGATTCAAATTGTAAA+TGG | 0.262132 | 1_3:-57555812 | Msa0127920:CDS |
| ATATATAAGGATGTAGAAAT+TGG | 0.273437 | 1_3:-57550723 | Msa0127920:three_prime_UTR |
| ACATCCTTATATATAGTTTC+GGG | 0.289226 | 1_3:+57550732 | None:intergenic |
| TACATCCTTATATATAGTTT+CGG | 0.295613 | 1_3:+57550731 | None:intergenic |
| GTTCCAGATAACACAAGTTC+TGG | 0.296830 | 1_3:-57551601 | Msa0127920:CDS |
| TTATAGGTGTATGCACTTAC+TGG | 0.300360 | 1_3:-57558275 | Msa0127920:intron |
| TTTGTTTCAGCTGCAAAATA+AGG | 0.323047 | 1_3:-57551863 | Msa0127920:intron |
| TTTGCTAGGGTGATTGGAAT+TGG | 0.331225 | 1_3:+57552183 | None:intergenic |
| CGAGGAGTATGAGAAATATT+TGG | 0.337332 | 1_3:-57555602 | Msa0127920:CDS |
| ATCAAACTTTGCTGGAACTT+GGG | 0.341194 | 1_3:-57553152 | Msa0127920:CDS |
| TTGACCTTAAAATTATTATC+AGG | 0.343373 | 1_3:+57552118 | None:intergenic |
| AGCTCAAAACTTTGGCGCTT+CGG | 0.346640 | 1_3:-57558579 | Msa0127920:five_prime_UTR |
| ATCTCCTGTGAAACGTTATA+TGG | 0.347225 | 1_3:+57554381 | None:intergenic |
| TAAGCCCGAAACTATATATA+AGG | 0.349686 | 1_3:-57550736 | Msa0127920:three_prime_UTR |
| CAGTTGATCTGTTTCCTCCT+TGG | 0.354649 | 1_3:+57554857 | None:intergenic |
| AAAGCCTCCTTCAGACAAAA+AGG | 0.356170 | 1_3:-57558204 | Msa0127920:intron |
| ACGTGTTGATCAAACTTTGC+TGG | 0.359797 | 1_3:-57553160 | Msa0127920:CDS |
| ATTTGTATATAATTAGGATT+AGG | 0.361154 | 1_3:-57550814 | Msa0127920:three_prime_UTR |
| TTTCCCTCATTCAGGTCATT+TGG | 0.362778 | 1_3:-57556618 | Msa0127920:intron |
| AGGGACCAACCAAGCTCATT+AGG | 0.363260 | 1_3:-57550837 | Msa0127920:three_prime_UTR |
| TGCAGTGGATCCACTTGTTC+AGG | 0.368298 | 1_3:-57554560 | Msa0127920:intron |
| GATCAAACTTTGCTGGAACT+TGG | 0.378095 | 1_3:-57553153 | Msa0127920:CDS |
| GTAAATGGTGTTCCACCAAC+AGG | 0.383590 | 1_3:-57555797 | Msa0127920:CDS |
| ATGTAGAAATTGGTTTGTTA+AGG | 0.386930 | 1_3:-57550713 | Msa0127920:three_prime_UTR |
| TGCATTTACCTTGTTATACT+TGG | 0.387949 | 1_3:+57555760 | None:intergenic |
| ATCATGGAAGGCACGACTAT+TGG | 0.390462 | 1_3:+57553617 | None:intergenic |
| GCTTTGTTTGAGAGAGGATC+AGG | 0.395914 | 1_3:+57554337 | None:intergenic |
| ATCCGTAGAAGATGGATTCC+TGG | 0.400770 | 1_3:+57554585 | None:intergenic |
| GGTGGAAGTTCTGTCTTTGA+TGG | 0.403854 | 1_3:+57553638 | None:intergenic |
| TCTTCAACAGTTCGAGATGA+AGG | 0.406013 | 1_3:+57554780 | None:intergenic |
| GGTCCCTAGCACCTGGTGGC+TGG | 0.406645 | 1_3:+57550853 | None:intergenic |
| TACAAATCGCAACACCATTC+CGG | 0.417236 | 1_3:+57551089 | None:intergenic |
| CTTGCTGAATCTTCAGAAAC+AGG | 0.417237 | 1_3:-57551993 | Msa0127920:intron |
| GTCCTTGCCATGCAGTATCC+CGG | 0.421755 | 1_3:-57554621 | Msa0127920:intron |
| AACCTATGCACTTGGACAAA+TGG | 0.426661 | 1_3:-57553223 | Msa0127920:CDS |
| TGAGTTGGATGTTGCTTCAA+AGG | 0.427293 | 1_3:-57553708 | Msa0127920:CDS |
| TTCCAGATAACACAAGTTCT+GGG | 0.430784 | 1_3:-57551600 | Msa0127920:CDS |
| CCTACTCTCAGTGAAAATAT+AGG | 0.431705 | 1_3:+57553872 | None:intergenic |
| TGATCTTCAGCTTCACCATT+GGG | 0.438327 | 1_3:-57556560 | Msa0127920:intron |
| GATTTATTGTTATAGCTGAT+AGG | 0.439661 | 1_3:-57554806 | Msa0127920:CDS |
| TGCATTATCTGTCGATATCA+TGG | 0.441207 | 1_3:+57553601 | None:intergenic |
| TCGAACTGTTGAAGAATTGA+AGG | 0.443297 | 1_3:-57554772 | Msa0127920:CDS |
| AATCAAAATCATCAACTAAA+GGG | 0.449696 | 1_3:-57558539 | Msa0127920:five_prime_UTR |
| TCCTGGCAATTAACATAGCC+CGG | 0.451028 | 1_3:+57554602 | None:intergenic |
| TATCAGCTATAACAATAAAT+CGG | 0.454968 | 1_3:+57554808 | None:intergenic |
| GCTTTCTGTTAGGTGGCAAC+CGG | 0.455766 | 1_3:-57551108 | Msa0127920:intron |
| AAATCAAAATCATCAACTAA+AGG | 0.456338 | 1_3:-57558540 | Msa0127920:five_prime_UTR |
| AAATCAACTGCTGGCATAAG+AGG | 0.458830 | 1_3:+57558242 | None:intergenic |
| GGGTCACACTGCGAAACAAC+GGG | 0.473685 | 1_3:-57551814 | Msa0127920:CDS |
| TTTGCATCGAGGCGGAGATC+AGG | 0.475049 | 1_3:-57551635 | Msa0127920:CDS |
| TATACAAATCCTAATGAGCT+TGG | 0.482672 | 1_3:+57550828 | None:intergenic |
| ATAAAGTTCACTTCCTCTGT+GGG | 0.493810 | 1_3:+57550904 | None:intergenic |
| ACAGTTCTAATTTCATTCCC+AGG | 0.497347 | 1_3:+57553914 | None:intergenic |
| CTTGTTGCTTTGTTTGAGAG+AGG | 0.497997 | 1_3:+57554331 | None:intergenic |
| ATAAACCCTAAATATTTCCA+TGG | 0.499501 | 1_3:-57558455 | Msa0127920:exon |
| CTGTTAGGTGGCAACCGGAA+TGG | 0.501065 | 1_3:-57551103 | Msa0127920:intron |
| TGATGGAGATACAGTTTCAC+CGG | 0.502528 | 1_3:+57553655 | None:intergenic |
| CCCGGGCTATGTTAATTGCC+AGG | 0.503662 | 1_3:-57554603 | Msa0127920:CDS |
| ATGGAAGGCACGACTATTGG+TGG | 0.505977 | 1_3:+57553620 | None:intergenic |
| GATACCAGCCACCAGGTGCT+AGG | 0.506076 | 1_3:-57550857 | Msa0127920:three_prime_UTR |
| CAATCTGCAAGCTCATCAGC+TGG | 0.509587 | 1_3:-57553198 | Msa0127920:CDS |
| GTCGACCACACCTGAACAAG+TGG | 0.512934 | 1_3:+57554550 | None:intergenic |
| CAAATCCTAATGAGCTTGGT+TGG | 0.514431 | 1_3:+57550832 | None:intergenic |
| CTTGGTTGGTCCCTAGCACC+TGG | 0.514527 | 1_3:+57550846 | None:intergenic |
| ATGATCTTCAGCTTCACCAT+TGG | 0.514864 | 1_3:-57556561 | Msa0127920:CDS |
| TGCATAATATATCTAAAGTC+CGG | 0.516488 | 1_3:-57558732 | Msa0127920:five_prime_UTR |
| CAACATCCAACTCAGACTCT+CGG | 0.518492 | 1_3:+57553717 | None:intergenic |
| AGCAGTGAACTCAAAACTCC+TGG | 0.521665 | 1_3:-57551028 | Msa0127920:CDS |
| AACATCCAACTCAGACTCTC+GGG | 0.521677 | 1_3:+57553718 | None:intergenic |
| TCAAACTTTGCTGGAACTTG+GGG | 0.524390 | 1_3:-57553151 | Msa0127920:intron |
| AGATACAGTTTCACCGGGGT+TGG | 0.525293 | 1_3:+57553661 | None:intergenic |
| TTGAAGGATCGATATTATAG+TGG | 0.527157 | 1_3:-57554756 | Msa0127920:intron |
| AACAGAGACAAATCAACTGC+TGG | 0.529934 | 1_3:+57558233 | None:intergenic |
| CTAAAGTCCGGTTTGAACCT+CGG | 0.535643 | 1_3:-57558720 | Msa0127920:five_prime_UTR |
| ATATAACGTTTCACAGGAGA+TGG | 0.536143 | 1_3:-57554379 | Msa0127920:CDS |
| TGCCAGGAATCCATCTTCTA+CGG | 0.537155 | 1_3:-57554587 | Msa0127920:CDS |
| TGCAGGTCAATTTGAAACCA+AGG | 0.539590 | 1_3:-57552072 | Msa0127920:intron |
| CTTCAACAGTTCGAGATGAA+GGG | 0.541369 | 1_3:+57554781 | None:intergenic |
| CTAGAATTCTTCTCCTGAAG+TGG | 0.542194 | 1_3:+57558391 | None:intergenic |
| ACTGCAACATCCGTAGAAGA+TGG | 0.546115 | 1_3:+57554577 | None:intergenic |
| CACCATTTGTCCAAGTGCAT+AGG | 0.547944 | 1_3:+57553221 | None:intergenic |
| TCCTTGCCATGCAGTATCCC+GGG | 0.551210 | 1_3:-57554620 | Msa0127920:intron |
| TCATTCAGGTCATTTGGCGA+TGG | 0.553815 | 1_3:-57556612 | Msa0127920:intron |
| AAATTATTATCAGGAAGTGC+AGG | 0.555199 | 1_3:+57552127 | None:intergenic |
| TACCATGCGAAGAGAGGCTA+TGG | 0.556004 | 1_3:+57553574 | None:intergenic |
| CAAGCTCATCAGCTGGACTT+CGG | 0.556264 | 1_3:-57553191 | Msa0127920:CDS |
| ACAAGAGCGAAGAGATGAAG+AGG | 0.556809 | 1_3:-57554313 | Msa0127920:intron |
| AACTGTTTGACTTGTGTGAG+AGG | 0.559257 | 1_3:-57554839 | Msa0127920:CDS |
| TATTCAAGAACCTATGCACT+TGG | 0.559755 | 1_3:-57553231 | Msa0127920:CDS |
| TAGGTGTATGCACTTACTGG+TGG | 0.572395 | 1_3:-57558272 | Msa0127920:CDS |
| AAAGAATAGTCCCCTGTTGG+TGG | 0.572554 | 1_3:+57555785 | None:intergenic |
| ATACCAGCCACCAGGTGCTA+GGG | 0.573561 | 1_3:-57550856 | Msa0127920:three_prime_UTR |
| ACTCCTGGCAGTTCTGATTG+TGG | 0.575737 | 1_3:-57551013 | Msa0127920:CDS |
| GCAGGTCAATTTGAAACCAA+GGG | 0.576834 | 1_3:-57552071 | Msa0127920:intron |
| TTAACTTACCATGCGAAGAG+AGG | 0.578824 | 1_3:+57553568 | None:intergenic |
| GGAACCATATAACGTTTCAC+AGG | 0.582270 | 1_3:-57554385 | Msa0127920:CDS |
| CTTTGTTTGAGAGAGGATCA+GGG | 0.585863 | 1_3:+57554338 | None:intergenic |
| GGTTGCCCGAGAGTCTGAGT+TGG | 0.587360 | 1_3:-57553723 | Msa0127920:CDS |
| ATCTTCTACGGATGTTGCAG+TGG | 0.587379 | 1_3:-57554575 | Msa0127920:CDS |
| CGGGTCACACTGCGAAACAA+CGG | 0.588101 | 1_3:-57551815 | Msa0127920:CDS |
| TACCATAGCCTCTCTTCGCA+TGG | 0.588204 | 1_3:-57553576 | Msa0127920:intron |
| AATAAAGTTCACTTCCTCTG+TGG | 0.589152 | 1_3:+57550903 | None:intergenic |
| GTTTCAGCTGCAAAATAAGG+AGG | 0.600246 | 1_3:-57551860 | Msa0127920:intron |
| ATTCTTCTCCTGAAGTGGGA+AGG | 0.601079 | 1_3:+57558396 | None:intergenic |
| CCTGGCAATTAACATAGCCC+GGG | 0.603428 | 1_3:+57554603 | None:intergenic |
| TAACCACAATCAGAACTGCC+AGG | 0.606641 | 1_3:+57551010 | None:intergenic |
| CGAAACAACGGGAACACCAA+AGG | 0.608995 | 1_3:-57551803 | Msa0127920:intron |
| GATGGAGATACAGTTTCACC+GGG | 0.610196 | 1_3:+57553656 | None:intergenic |
| TTGTGCAAACGTTACAGAGA+GGG | 0.610465 | 1_3:-57553684 | Msa0127920:CDS |
| GCAAAAGAATAGTCCCCTGT+TGG | 0.610779 | 1_3:+57555782 | None:intergenic |
| TAAATGGTGTTCCACCAACA+GGG | 0.611976 | 1_3:-57555796 | Msa0127920:CDS |
| CTGCAAAATAAGGAGGCTGA+AGG | 0.613211 | 1_3:-57551853 | Msa0127920:CDS |
| TAGAATTCTTCTCCTGAAGT+GGG | 0.615625 | 1_3:+57558392 | None:intergenic |
| TCCAGATAACACAAGTTCTG+GGG | 0.616535 | 1_3:-57551599 | Msa0127920:CDS |
| TTATCTGTCGATATCATGGA+AGG | 0.626460 | 1_3:+57553605 | None:intergenic |
| TTAGAGTGATACCAGCCACC+AGG | 0.626927 | 1_3:-57550864 | Msa0127920:three_prime_UTR |
| GGTTGGTCCCTAGCACCTGG+TGG | 0.629488 | 1_3:+57550849 | None:intergenic |
| CTGTTTCTGAAGATTCAGCA+AGG | 0.629529 | 1_3:+57551994 | None:intergenic |
| CATAACAAGATACACGGACG+AGG | 0.639523 | 1_3:-57555620 | Msa0127920:CDS |
| GAATTCGTGATTAGAAAGAG+TGG | 0.650216 | 1_3:-57558502 | Msa0127920:five_prime_UTR |
| ACTGTGCTGTAAGACTGTAA+TGG | 0.655044 | 1_3:-57558614 | Msa0127920:five_prime_UTR |
| CAGTGCTACATGGAGCAATG+AGG | 0.668897 | 1_3:-57550951 | Msa0127920:three_prime_UTR |
| ACGTTTCACAGGAGATGGAG+CGG | 0.669816 | 1_3:-57554374 | Msa0127920:CDS |
| CCAGATAACACAAGTTCTGG+GGG | 0.671324 | 1_3:-57551598 | Msa0127920:intron |
| TGCCGACAGCGTTTGCATCG+AGG | 0.672897 | 1_3:-57551646 | Msa0127920:intron |
| TCAGGAGAAGAATTCTAGCG+AGG | 0.675024 | 1_3:-57558386 | Msa0127920:intron |
| GTTACAGAGAGGGCCAACCC+CGG | 0.680256 | 1_3:-57553674 | Msa0127920:CDS |
| TAAAGTTCACTTCCTCTGTG+GGG | 0.681936 | 1_3:+57550905 | None:intergenic |
| ATTTATGTAGAAATGGACCA+AGG | 0.683713 | 1_3:-57554874 | Msa0127920:intron |
| TGAATTACGCATAACGACCA+AGG | 0.689788 | 1_3:-57554151 | Msa0127920:intron |
| AAATGGTGTTCCACCAACAG+GGG | 0.698079 | 1_3:-57555795 | Msa0127920:CDS |
| TGTTGACATAACAAGATACA+CGG | 0.700844 | 1_3:-57555626 | Msa0127920:CDS |
| CTTGTGCAAACGTTACAGAG+AGG | 0.710038 | 1_3:-57553685 | Msa0127920:CDS |
| CGACAGCGTTTGCATCGAGG+CGG | 0.711723 | 1_3:-57551643 | Msa0127920:intron |
| TATGTAGAAATGGACCAAGG+AGG | 0.727348 | 1_3:-57554871 | Msa0127920:intron |
| CATCAAATACATCCCCACAG+AGG | 0.759825 | 1_3:-57550917 | Msa0127920:three_prime_UTR |
| ATGGAGATACAGTTTCACCG+GGG | 0.808137 | 1_3:+57553657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCAATAATTTATTTTTC+TGG | - | chr1_3:57551149-57551168 | Msa0127920:intron | 10.0% |
| !!! | TTTTCATATAAAAAAAAACA+AGG | - | chr1_3:57551451-57551470 | Msa0127920:intron | 10.0% |
| !! | TTTCATATAAAAAAAAACAA+GGG | - | chr1_3:57551452-57551471 | Msa0127920:intron | 10.0% |
| !! | TAAACGAAAATTATTTAAAT+GGG | + | chr1_3:57552167-57552186 | None:intergenic | 10.0% |
| !! | AAATTATATTTATGTAGAAA+TGG | - | chr1_3:57554577-57554596 | Msa0127920:CDS | 10.0% |
| !! | TAAATAATACTTATTAAAAG+GGG | + | chr1_3:57555183-57555202 | None:intergenic | 10.0% |
| !! | ATGTTTAAATAAAATGAAAT+TGG | + | chr1_3:57555504-57555523 | None:intergenic | 10.0% |
| !! | TGAAATAAAAAACGTTAAAT+TGG | + | chr1_3:57551135-57551154 | None:intergenic | 15.0% |
| !!! | ATATGAAAATTTTAGTATGT+TGG | + | chr1_3:57551440-57551459 | None:intergenic | 15.0% |
| !! | GTAAACGAAAATTATTTAAA+TGG | + | chr1_3:57552168-57552187 | None:intergenic | 15.0% |
| !!! | CTTTTCTTATTTAGAATAAT+GGG | + | chr1_3:57552660-57552679 | None:intergenic | 15.0% |
| !!! | ACTTTTCTTATTTAGAATAA+TGG | + | chr1_3:57552661-57552680 | None:intergenic | 15.0% |
| !! | AGTTATGAACAAAAAATATT+AGG | - | chr1_3:57553240-57553259 | Msa0127920:CDS | 15.0% |
| !!! | CAAATATAGAAATATTGTTT+TGG | + | chr1_3:57554205-57554224 | None:intergenic | 15.0% |
| !!! | AAATAAACAACTTTTAAGTT+AGG | + | chr1_3:57554268-57554287 | None:intergenic | 15.0% |
| !! | TCTACATAAATATAATTTCA+TGG | + | chr1_3:57554575-57554594 | None:intergenic | 15.0% |
| !! | AAACTAAGAATAAAAGAAAA+TGG | + | chr1_3:57554772-57554791 | None:intergenic | 15.0% |
| !!! | AACATTTTTTTTATTTGTTC+AGG | - | chr1_3:57555519-57555538 | Msa0127920:intron | 15.0% |
| !!! | ACATTTTTTTTATTTGTTCA+GGG | - | chr1_3:57555520-57555539 | Msa0127920:intron | 15.0% |
| !! | ATATTTATATTCCACAAATT+TGG | + | chr1_3:57555645-57555664 | None:intergenic | 15.0% |
| !!! | TATTTGATTTTGTTTCTTTT+AGG | - | chr1_3:57555714-57555733 | Msa0127920:intron | 15.0% |
| !!! | TACTAATGTCATTTTTTTAT+AGG | - | chr1_3:57557518-57557537 | Msa0127920:intron | 15.0% |
| !! | ATTAGGATTTGTATATAATT+AGG | - | chr1_3:57558638-57558657 | Msa0127920:five_prime_UTR | 15.0% |
| !! | ATTTGTATATAATTAGGATT+AGG | - | chr1_3:57558644-57558663 | Msa0127920:five_prime_UTR | 15.0% |
| !! | AAATCAAAATCATCAACTAA+AGG | - | chr1_3:57550918-57550937 | Msa0127920:three_prime_UTR | 20.0% |
| !! | AATCAAAATCATCAACTAAA+GGG | - | chr1_3:57550919-57550938 | Msa0127920:three_prime_UTR | 20.0% |
| !!! | AGGTATTTTTTTTTTCTTGT+TGG | - | chr1_3:57551274-57551293 | Msa0127920:intron | 20.0% |
| !!! | AAGAAGATTGTAAATTTTTC+CGG | + | chr1_3:57551478-57551497 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAGTAAC+CGG | + | chr1_3:57551862-57551881 | None:intergenic | 20.0% |
| !!! | AAGCAAAAAAACACTTTTTT+AGG | - | chr1_3:57551873-57551892 | Msa0127920:intron | 20.0% |
| !! | TCATAAGAAGATACATTATT+AGG | - | chr1_3:57552076-57552095 | Msa0127920:intron | 20.0% |
| !!! | TTTCAGTCAATAATTTGTTT+AGG | + | chr1_3:57552497-57552516 | None:intergenic | 20.0% |
| !!! | AACAAATTATTGACTGAAAT+TGG | - | chr1_3:57552498-57552517 | Msa0127920:intron | 20.0% |
| !!! | ACAAATTATTGACTGAAATT+GGG | - | chr1_3:57552499-57552518 | Msa0127920:intron | 20.0% |
| !! | ATACCATATCTAAATATCTT+TGG | + | chr1_3:57553421-57553440 | None:intergenic | 20.0% |
| !! | TTGATTCATTAATTGGAAAA+TGG | - | chr1_3:57553569-57553588 | Msa0127920:intron | 20.0% |
| !! | TGATTCATTAATTGGAAAAT+GGG | - | chr1_3:57553570-57553589 | Msa0127920:intron | 20.0% |
| !! | ATAGTTAGAATGTATATGAA+AGG | - | chr1_3:57554048-57554067 | Msa0127920:intron | 20.0% |
| !! | TATCAGCTATAACAATAAAT+CGG | + | chr1_3:57554653-57554672 | None:intergenic | 20.0% |
| !! | AGAGAAAATGAAGTAAATAT+AGG | - | chr1_3:57555227-57555246 | Msa0127920:intron | 20.0% |
| !! | ATGAAGTAAATATAGGTATT+AGG | - | chr1_3:57555234-57555253 | Msa0127920:intron | 20.0% |
| !!! | CATTTTTTTTATTTGTTCAG+GGG | - | chr1_3:57555521-57555540 | Msa0127920:intron | 20.0% |
| !! | TCAAGAAATATAGAATAACA+AGG | - | chr1_3:57556022-57556041 | Msa0127920:intron | 20.0% |
| !! | TTCTTTGTATTCTACATATT+TGG | - | chr1_3:57557045-57557064 | Msa0127920:intron | 20.0% |
| !!! | ACTTCCTGATAATAATTTTA+AGG | - | chr1_3:57557336-57557355 | Msa0127920:intron | 20.0% |
| !! | TTGACCTTAAAATTATTATC+AGG | + | chr1_3:57557343-57557362 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAATCTAACCTT+TGG | + | chr1_3:57557674-57557693 | None:intergenic | 20.0% |
| !!! | TTTTTTCTGTCTTTTTGATT+GGG | + | chr1_3:57558188-57558207 | None:intergenic | 20.0% |
| !! | TACATCCTTATATATAGTTT+CGG | + | chr1_3:57558730-57558749 | None:intergenic | 20.0% |
| !! | ATATATAAGGATGTAGAAAT+TGG | - | chr1_3:57558735-57558754 | Msa0127920:five_prime_UTR | 20.0% |
| ! | TGTATTTAGCTAAGCTAATA+AGG | - | chr1_3:57550699-57550718 | Msa0127920:three_prime_UTR | 25.0% |
| !! | TGCATAATATATCTAAAGTC+CGG | - | chr1_3:57550726-57550745 | Msa0127920:three_prime_UTR | 25.0% |
| ! | ATAAACCCTAAATATTTCCA+TGG | - | chr1_3:57551003-57551022 | Msa0127920:exon | 25.0% |
| !! | AAAAATACCTTTTTGTCTGA+AGG | + | chr1_3:57551264-57551283 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTGTTGGTTGT+TGG | - | chr1_3:57551281-57551300 | Msa0127920:intron | 25.0% |
| ! | TGTTTGAACAAAATTAGAGT+CGG | - | chr1_3:57551340-57551359 | Msa0127920:intron | 25.0% |
| ! | ATATAAAAAAAAACAAGGGC+CGG | - | chr1_3:57551456-57551475 | Msa0127920:intron | 25.0% |
| ! | GGAAAAATTTACAATCTTCT+TGG | - | chr1_3:57551477-57551496 | Msa0127920:intron | 25.0% |
| ! | AAACAGAATCTATATCCTAT+GGG | + | chr1_3:57551650-57551669 | None:intergenic | 25.0% |
| !!! | AAAACACTTTTTTAGGTTCA+TGG | - | chr1_3:57551880-57551899 | Msa0127920:intron | 25.0% |
| !!! | TTTTAGGTTCATTGAATAAC+AGG | + | chr1_3:57551944-57551963 | None:intergenic | 25.0% |
| ! | TTATTCAATGAACCTAAAAG+TGG | - | chr1_3:57551945-57551964 | Msa0127920:intron | 25.0% |
| !!! | AAAAACCAAAAACCACTTTT+AGG | + | chr1_3:57551960-57551979 | None:intergenic | 25.0% |
| ! | TAAAATAAGTCAATCCAAAC+TGG | - | chr1_3:57552052-57552071 | Msa0127920:CDS | 25.0% |
| ! | ATTATTAGGAAGAAGAAAGA+AGG | - | chr1_3:57552090-57552109 | Msa0127920:intron | 25.0% |
| ! | TCTTAAAAGCTTAGGTTATT+AGG | + | chr1_3:57552564-57552583 | None:intergenic | 25.0% |
| ! | ATTGACTATCTTAAAAGCTT+AGG | + | chr1_3:57552572-57552591 | None:intergenic | 25.0% |
| ! | AAGATAGTCAATCAATGATA+TGG | - | chr1_3:57552580-57552599 | Msa0127920:intron | 25.0% |
| !! | TTAGAATAATGGGATCAATA+AGG | + | chr1_3:57552650-57552669 | None:intergenic | 25.0% |
| ! | AATTTCAACAATATGTTGTG+TGG | - | chr1_3:57552683-57552702 | Msa0127920:intron | 25.0% |
| ! | ATTTCAACAATATGTTGTGT+GGG | - | chr1_3:57552684-57552703 | Msa0127920:intron | 25.0% |
| ! | CCAATTATTGTAAAAGCTTA+AGG | + | chr1_3:57552790-57552809 | None:intergenic | 25.0% |
| !! | CCTTAAGCTTTTACAATAAT+TGG | - | chr1_3:57552787-57552806 | Msa0127920:intron | 25.0% |
| ! | ATTTATAACGATGCAGATAT+TGG | - | chr1_3:57553118-57553137 | Msa0127920:intron | 25.0% |
| ! | TTTATAACGATGCAGATATT+GGG | - | chr1_3:57553119-57553138 | Msa0127920:intron | 25.0% |
| ! | ACACCAAAGATATTTAGATA+TGG | - | chr1_3:57553415-57553434 | Msa0127920:intron | 25.0% |
| ! | GTATGCTTTGATTCATTAAT+TGG | - | chr1_3:57553562-57553581 | Msa0127920:intron | 25.0% |
| ! | TTGTGAATCAAATCATGAAT+AGG | + | chr1_3:57553600-57553619 | None:intergenic | 25.0% |
| !! | GCTACAAAAAACTGAATTTT+AGG | - | chr1_3:57553975-57553994 | Msa0127920:intron | 25.0% |
| ! | CATATACATTCTAACTATAC+AGG | + | chr1_3:57554046-57554065 | None:intergenic | 25.0% |
| !! | AAAGTTGTTTATTTGCTAGT+TGG | - | chr1_3:57554274-57554293 | Msa0127920:intron | 25.0% |
| !!! | TTCTGTGTTATTTTAAGAGT+TGG | - | chr1_3:57554471-57554490 | Msa0127920:intron | 25.0% |
| ! | GATTTATTGTTATAGCTGAT+AGG | - | chr1_3:57554652-57554671 | Msa0127920:intron | 25.0% |
| !! | AATAAAACCTTTTCAGCATT+AGG | - | chr1_3:57555005-57555024 | Msa0127920:intron | 25.0% |
| ! | TTAACTACTGTATTATATGC+AGG | - | chr1_3:57555259-57555278 | Msa0127920:intron | 25.0% |
| ! | ACAACCATTAAAAATTACCT+TGG | + | chr1_3:57555327-57555346 | None:intergenic | 25.0% |
| ! | ATGACACTTATAATTACATG+TGG | - | chr1_3:57555353-57555372 | Msa0127920:intron | 25.0% |
| !! | AAAGGCATAATTAGATAGTA+TGG | + | chr1_3:57555398-57555417 | None:intergenic | 25.0% |
| ! | ATGAGAAAAACTAAGCAAAA+AGG | + | chr1_3:57555416-57555435 | None:intergenic | 25.0% |
| !! | TAGGTTATTGTTAGTTTCAT+TGG | - | chr1_3:57555605-57555624 | Msa0127920:CDS | 25.0% |
| ! | TTAGTTTCATTGGATCAATT+GGG | - | chr1_3:57555615-57555634 | Msa0127920:CDS | 25.0% |
| ! | AAATATTTACACCCAAACTT+TGG | - | chr1_3:57555659-57555678 | Msa0127920:intron | 25.0% |
| ! | TTATGAAAATTTGACTGTAG+AGG | - | chr1_3:57556061-57556080 | Msa0127920:intron | 25.0% |
| ! | TTGAAAATTGTGTTTCACAA+GGG | + | chr1_3:57556134-57556153 | None:intergenic | 25.0% |
| !! | AGGGTATCATATAATGTTAT+TGG | + | chr1_3:57556415-57556434 | None:intergenic | 25.0% |
| ! | ATTCTACATTTCACTATTTC+AGG | - | chr1_3:57556438-57556457 | Msa0127920:intron | 25.0% |
| ! | AAACTTTCAAATAACGTTTC+TGG | - | chr1_3:57556726-57556745 | Msa0127920:intron | 25.0% |
| ! | TCTCACATTTCAAACATAAA+TGG | - | chr1_3:57556918-57556937 | Msa0127920:intron | 25.0% |
| !! | AGTTTCAGCTTTTAGTATAA+TGG | - | chr1_3:57557002-57557021 | Msa0127920:intron | 25.0% |
| !! | GTTTCAGCTTTTAGTATAAT+GGG | - | chr1_3:57557003-57557022 | Msa0127920:intron | 25.0% |
| ! | AATTGGACTACATTCATTAA+TGG | + | chr1_3:57557261-57557280 | None:intergenic | 25.0% |
| ! | TAAATAATGTGCTTTAGCAT+TGG | + | chr1_3:57558092-57558111 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTGTCTTTTTGAT+TGG | + | chr1_3:57558189-57558208 | None:intergenic | 25.0% |
| ! | AAAAAGACAGAAAAAACTGA+AGG | - | chr1_3:57558192-57558211 | Msa0127920:intron | 25.0% |
| ! | TACAGAATCAAACAAAAGAT+AGG | + | chr1_3:57558260-57558279 | None:intergenic | 25.0% |
| !! | TTTTTATATTCAGTGCTACA+TGG | - | chr1_3:57558497-57558516 | Msa0127920:five_prime_UTR | 25.0% |
| ! | ACATCCTTATATATAGTTTC+GGG | + | chr1_3:57558729-57558748 | None:intergenic | 25.0% |
| !!! | ATGTAGAAATTGGTTTGTTA+AGG | - | chr1_3:57558745-57558764 | Msa0127920:five_prime_UTR | 25.0% |
| !!! | CAAACTTTTTTTTTTGTCCG+AGG | + | chr1_3:57550758-57550777 | None:intergenic | 30.0% |
| CACATCCATGGAAATATTTA+GGG | + | chr1_3:57551011-57551030 | None:intergenic | 30.0% | |
| TCACATCCATGGAAATATTT+AGG | + | chr1_3:57551012-57551031 | None:intergenic | 30.0% | |
| ! | AAGGATATTTTTCACATCCA+TGG | + | chr1_3:57551023-57551042 | None:intergenic | 30.0% |
| ATGGATGTGAAAAATATCCT+TGG | - | chr1_3:57551022-57551041 | Msa0127920:CDS | 30.0% | |
| !! | ATTTTTCACCAAAGCACTTA+GGG | - | chr1_3:57551104-57551123 | Msa0127920:intron | 30.0% |
| !! | TCTGGTGTTGTTGAATTTAT+AGG | - | chr1_3:57551167-57551186 | Msa0127920:intron | 30.0% |
| AACAAAATTAGAGTCGGAAA+CGG | - | chr1_3:57551346-57551365 | Msa0127920:intron | 30.0% | |
| GATATACAACATGTCAAGTT+TGG | - | chr1_3:57551529-57551548 | Msa0127920:intron | 30.0% | |
| AACAGAATCTATATCCTATG+GGG | + | chr1_3:57551649-57551668 | None:intergenic | 30.0% | |
| CAAACAGAATCTATATCCTA+TGG | + | chr1_3:57551651-57551670 | None:intergenic | 30.0% | |
| CATAGGATATAGATTCTGTT+TGG | - | chr1_3:57551649-57551668 | Msa0127920:intron | 30.0% | |
| !! | TGTTTTTATGAGCTATTACG+AGG | - | chr1_3:57551789-57551808 | Msa0127920:intron | 30.0% |
| TTCATTGAATAACAGGTATC+TGG | + | chr1_3:57551937-57551956 | None:intergenic | 30.0% | |
| ! | ATGAACCTAAAAGTGGTTTT+TGG | - | chr1_3:57551952-57551971 | Msa0127920:intron | 30.0% |
| CACTCTAAATCTTTCTTCTT+CGG | + | chr1_3:57552190-57552209 | None:intergenic | 30.0% | |
| TTCAATAGATTCTCAGACAT+TGG | + | chr1_3:57552426-57552445 | None:intergenic | 30.0% | |
| !! | GAAGAAGAAAAGTACCAAAT+AGG | - | chr1_3:57552443-57552462 | Msa0127920:intron | 30.0% |
| ATTAGGTGAGAGCAATTTAA+TGG | + | chr1_3:57552547-57552566 | None:intergenic | 30.0% | |
| GTCAATCAATGATATGGATA+TGG | - | chr1_3:57552586-57552605 | Msa0127920:intron | 30.0% | |
| CAATGATATGGATATGGTAT+TGG | - | chr1_3:57552592-57552611 | Msa0127920:intron | 30.0% | |
| !!! | TTTGATTTTTTCCCTCATTC+AGG | - | chr1_3:57552832-57552851 | Msa0127920:intron | 30.0% |
| ! | TTACGAGCAGAATTTTTGAA+AGG | + | chr1_3:57552875-57552894 | None:intergenic | 30.0% |
| ATGCTCCAAGATAACATAAA+GGG | + | chr1_3:57552961-57552980 | None:intergenic | 30.0% | |
| TTATAACGATGCAGATATTG+GGG | - | chr1_3:57553120-57553139 | Msa0127920:intron | 30.0% | |
| !! | TTTGTTCATAACTTGTTTGC+AGG | + | chr1_3:57553233-57553252 | None:intergenic | 30.0% |
| ! | AGAAGATTGGTAATAGTGTT+GGG | - | chr1_3:57553301-57553320 | Msa0127920:intron | 30.0% |
| ! | GATTCACAATTTGATGATCA+CGG | - | chr1_3:57553611-57553630 | Msa0127920:CDS | 30.0% |
| CAGCAGATTCAAATTGTAAA+TGG | - | chr1_3:57553646-57553665 | Msa0127920:CDS | 30.0% | |
| ! | TTCTTTTGCCAAGTATAACA+AGG | - | chr1_3:57553690-57553709 | Msa0127920:CDS | 30.0% |
| ! | TGCATTTACCTTGTTATACT+TGG | + | chr1_3:57553701-57553720 | None:intergenic | 30.0% |
| AAGTATAACAAGGTAAATGC+AGG | - | chr1_3:57553700-57553719 | Msa0127920:CDS | 30.0% | |
| ! | TTCTGATTTTCTATCTTGAC+TGG | - | chr1_3:57553756-57553775 | Msa0127920:intron | 30.0% |
| ! | TCTGATTTTCTATCTTGACT+GGG | - | chr1_3:57553757-57553776 | Msa0127920:intron | 30.0% |
| TGTTGACATAACAAGATACA+CGG | - | chr1_3:57553832-57553851 | Msa0127920:intron | 30.0% | |
| AAATATTTGGCAAATCCTGT+AGG | - | chr1_3:57553869-57553888 | Msa0127920:intron | 30.0% | |
| ! | TGTTGTTTAAGCAATCTCAA+AGG | + | chr1_3:57553937-57553956 | None:intergenic | 30.0% |
| ! | ATGTATATGAAAGGCCTTTT+CGG | - | chr1_3:57554057-57554076 | Msa0127920:intron | 30.0% |
| TTAAGATGTATACACCGAAA+AGG | + | chr1_3:57554074-57554093 | None:intergenic | 30.0% | |
| ! | TTTCGGTGTATACATCTTAA+AGG | - | chr1_3:57554074-57554093 | Msa0127920:intron | 30.0% |
| ! | TTCGGTGTATACATCTTAAA+GGG | - | chr1_3:57554075-57554094 | Msa0127920:intron | 30.0% |
| CTTCCTTAACTGTATCTTTA+GGG | + | chr1_3:57554116-57554135 | None:intergenic | 30.0% | |
| ! | TTTTTATAACCAATGCCCTA+AGG | - | chr1_3:57554225-57554244 | Msa0127920:intron | 30.0% |
| ! | TTTTATAACCAATGCCCTAA+GGG | - | chr1_3:57554226-57554245 | Msa0127920:intron | 30.0% |
| GGGTAAGTGCATTTATAAAA+CGG | + | chr1_3:57554433-57554452 | None:intergenic | 30.0% | |
| ATTTATGTAGAAATGGACCA+AGG | - | chr1_3:57554584-57554603 | Msa0127920:CDS | 30.0% | |
| TTGAAGGATCGATATTATAG+TGG | - | chr1_3:57554702-57554721 | Msa0127920:intron | 30.0% | |
| ! | TTCAGCAATTCTTTTTGCTT+CGG | + | chr1_3:57555291-57555310 | None:intergenic | 30.0% |
| ! | ACGACCAAGGTAATTTTTAA+TGG | - | chr1_3:57555320-57555339 | Msa0127920:intron | 30.0% |
| ACTTATAATTACATGTGGAG+AGG | - | chr1_3:57555358-57555377 | Msa0127920:intron | 30.0% | |
| GAAACATCTCTTAGTATTTG+AGG | + | chr1_3:57555456-57555475 | None:intergenic | 30.0% | |
| ! | GTTAGTTTCATTGGATCAAT+TGG | - | chr1_3:57555614-57555633 | Msa0127920:CDS | 30.0% |
| TAGTTTCATTGGATCAATTG+GGG | - | chr1_3:57555616-57555635 | Msa0127920:CDS | 30.0% | |
| CGCATGGTAAGTTAAAAATA+AGG | - | chr1_3:57555898-57555917 | Msa0127920:intron | 30.0% | |
| CTTGAAAATTGTGTTTCACA+AGG | + | chr1_3:57556135-57556154 | None:intergenic | 30.0% | |
| !! | CACAATTTTCAAGCATTTGT+TGG | - | chr1_3:57556142-57556161 | Msa0127920:intron | 30.0% |
| ACATCAGAAATGCATTAAAG+AGG | + | chr1_3:57556345-57556364 | None:intergenic | 30.0% | |
| !! | TAATGTTATTGGTACTGATC+AGG | + | chr1_3:57556404-57556423 | None:intergenic | 30.0% |
| TAGTGAAATGTAGAATGCAA+GGG | + | chr1_3:57556434-57556453 | None:intergenic | 30.0% | |
| ATAGTGAAATGTAGAATGCA+AGG | + | chr1_3:57556435-57556454 | None:intergenic | 30.0% | |
| ACATTTCACTATTTCAGGAT+TGG | - | chr1_3:57556443-57556462 | Msa0127920:intron | 30.0% | |
| TGGTTAATGAGTTTCAGTTA+AGG | + | chr1_3:57556642-57556661 | None:intergenic | 30.0% | |
| CAAGTAGTGTCTTAATAGTT+CGG | - | chr1_3:57556787-57556806 | Msa0127920:intron | 30.0% | |
| ! | GTATTTCTATTAGAAGCCTA+AGG | + | chr1_3:57557187-57557206 | None:intergenic | 30.0% |
| GGTATTTCGTCTTCAAAAAA+AGG | + | chr1_3:57557313-57557332 | None:intergenic | 30.0% | |
| ! | AAATTATTATCAGGAAGTGC+AGG | + | chr1_3:57557334-57557353 | None:intergenic | 30.0% |
| TTTCTTTGTACTATGATTGC+AGG | - | chr1_3:57557369-57557388 | Msa0127920:intron | 30.0% | |
| GCTGAAACAAATTAAAGACA+CGG | + | chr1_3:57557586-57557605 | None:intergenic | 30.0% | |
| TTTGTTTCAGCTGCAAAATA+AGG | - | chr1_3:57557595-57557614 | Msa0127920:intron | 30.0% | |
| ! | CCATTCTTTTTCTCAAATCA+CGG | - | chr1_3:57557772-57557791 | Msa0127920:intron | 30.0% |
| ! | CATTCTTTTTCTCAAATCAC+GGG | - | chr1_3:57557773-57557792 | Msa0127920:intron | 30.0% |
| TAGATGAAATTTCTAACGCT+TGG | + | chr1_3:57557929-57557948 | None:intergenic | 30.0% | |
| AGAATCAAACAAAAGATAGG+AGG | + | chr1_3:57558257-57558276 | None:intergenic | 30.0% | |
| ! | ATTTGTAGTGCTCTTTTGAT+AGG | - | chr1_3:57558385-57558404 | Msa0127920:intron | 30.0% |
| !!! | AAGTGAACTTTATTTTGTGC+TGG | - | chr1_3:57558564-57558583 | Msa0127920:five_prime_UTR | 30.0% |
| TATACAAATCCTAATGAGCT+TGG | + | chr1_3:57558633-57558652 | None:intergenic | 30.0% | |
| ATATATAGTTTCGGGCTTAA+AGG | + | chr1_3:57558721-57558740 | None:intergenic | 30.0% | |
| TAAGCCCGAAACTATATATA+AGG | - | chr1_3:57558722-57558741 | Msa0127920:five_prime_UTR | 30.0% | |
| ! | TTTTTCGCAGCTCAAAACTT+TGG | - | chr1_3:57550871-57550890 | Msa0127920:three_prime_UTR | 35.0% |
| GAATTCGTGATTAGAAAGAG+TGG | - | chr1_3:57550956-57550975 | Msa0127920:three_prime_UTR | 35.0% | |
| GATGTGAAAAATATCCTTGG+AGG | - | chr1_3:57551025-57551044 | Msa0127920:CDS | 35.0% | |
| AAAAATTGGGTAATCCTCCA+AGG | + | chr1_3:57551042-57551061 | None:intergenic | 35.0% | |
| TGAAGTGGGAAGGAAAAATT+GGG | + | chr1_3:57551055-57551074 | None:intergenic | 35.0% | |
| TAGAATTCTTCTCCTGAAGT+GGG | + | chr1_3:57551069-57551088 | None:intergenic | 35.0% | |
| !! | CATTTTTCACCAAAGCACTT+AGG | - | chr1_3:57551103-57551122 | Msa0127920:intron | 35.0% |
| TTATAGGTGTATGCACTTAC+TGG | - | chr1_3:57551183-57551202 | Msa0127920:intron | 35.0% | |
| ! | AATACCTTTTTGTCTGAAGG+AGG | + | chr1_3:57551261-57551280 | None:intergenic | 35.0% |
| TTGTGATTAGTGTTGCAGTA+TGG | - | chr1_3:57551306-57551325 | Msa0127920:intron | 35.0% | |
| ACAAAATTAGAGTCGGAAAC+GGG | - | chr1_3:57551347-57551366 | Msa0127920:intron | 35.0% | |
| TGCTTATAATAGTAACCGGA+GGG | + | chr1_3:57551858-57551877 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTAACCGG+AGG | + | chr1_3:57551859-57551878 | None:intergenic | 35.0% | |
| !!! | TTTGGTTTTTATAGTGACCG+AGG | - | chr1_3:57551970-57551989 | Msa0127920:intron | 35.0% |
| GTTAATGACATGTACTTCCT+CGG | + | chr1_3:57551990-57552009 | None:intergenic | 35.0% | |
| AAGTAATTGTGCAACTGCTT+GGG | + | chr1_3:57552016-57552035 | None:intergenic | 35.0% | |
| TAAGTAATTGTGCAACTGCT+TGG | + | chr1_3:57552017-57552036 | None:intergenic | 35.0% | |
| TATCTTCTTATGAGCCAGTT+TGG | + | chr1_3:57552069-57552088 | None:intergenic | 35.0% | |
| !! | TCTGTTTGGCACTTGTTTTT+GGG | - | chr1_3:57552347-57552366 | Msa0127920:intron | 35.0% |
| GGTTCATAAACACACATGAA+TGG | + | chr1_3:57552397-57552416 | None:intergenic | 35.0% | |
| !! | ATTCTCAGACATTGGCTTAT+AGG | + | chr1_3:57552418-57552437 | None:intergenic | 35.0% |
| !! | GAAGAAAAGTACCAAATAGG+TGG | - | chr1_3:57552446-57552465 | Msa0127920:intron | 35.0% |
| ! | ACCTCTAGAAAACTTGGTTA+GGG | + | chr1_3:57552623-57552642 | None:intergenic | 35.0% |
| TTACAAACGAACTTACCCAA+TGG | + | chr1_3:57552916-57552935 | None:intergenic | 35.0% | |
| GTTAGCCCTTTATGTTATCT+TGG | - | chr1_3:57552953-57552972 | Msa0127920:intron | 35.0% | |
| CATGCTCCAAGATAACATAA+AGG | + | chr1_3:57552962-57552981 | None:intergenic | 35.0% | |
| CTTTATGTTATCTTGGAGCA+TGG | - | chr1_3:57552960-57552979 | Msa0127920:intron | 35.0% | |
| ! | ACACTTCATGCAATCTGTTT+TGG | + | chr1_3:57553044-57553063 | None:intergenic | 35.0% |
| TTATAAATGCAACGGAGTTG+GGG | + | chr1_3:57553106-57553125 | None:intergenic | 35.0% | |
| GTTATAAATGCAACGGAGTT+GGG | + | chr1_3:57553107-57553126 | None:intergenic | 35.0% | |
| CTGCATCGTTATAAATGCAA+CGG | + | chr1_3:57553114-57553133 | None:intergenic | 35.0% | |
| TATAACGATGCAGATATTGG+GGG | - | chr1_3:57553121-57553140 | Msa0127920:intron | 35.0% | |
| AGAGAGCTAAACAATCAATG+TGG | - | chr1_3:57553150-57553169 | Msa0127920:intron | 35.0% | |
| GAGAGCTAAACAATCAATGT+GGG | - | chr1_3:57553151-57553170 | Msa0127920:intron | 35.0% | |
| AGAGCTAAACAATCAATGTG+GGG | - | chr1_3:57553152-57553171 | Msa0127920:CDS | 35.0% | |
| !! | GAATGGATTTGGTAATGAGT+GGG | - | chr1_3:57553179-57553198 | Msa0127920:CDS | 35.0% |
| ! | GAGAAGATTGGTAATAGTGT+TGG | - | chr1_3:57553300-57553319 | Msa0127920:intron | 35.0% |
| ! | GAAGATTGGTAATAGTGTTG+GGG | - | chr1_3:57553302-57553321 | Msa0127920:intron | 35.0% |
| AAATGGGCAGCTGAAAATAT+AGG | - | chr1_3:57553467-57553486 | Msa0127920:intron | 35.0% | |
| AATGGGCAGCTGAAAATATA+GGG | - | chr1_3:57553468-57553487 | Msa0127920:intron | 35.0% | |
| AAATCAGAAAAATGCAGACC+AGG | + | chr1_3:57553745-57553764 | None:intergenic | 35.0% | |
| ! | CGAGGAGTATGAGAAATATT+TGG | - | chr1_3:57553856-57553875 | Msa0127920:intron | 35.0% |
| AATCTAGACATGATACCTAC+AGG | + | chr1_3:57553887-57553906 | None:intergenic | 35.0% | |
| ! | GGTGATGATGTATCATGTTA+AGG | - | chr1_3:57553996-57554015 | Msa0127920:intron | 35.0% |
| GTTCCCTAAAGATACAGTTA+AGG | - | chr1_3:57554110-57554129 | Msa0127920:intron | 35.0% | |
| GCTTCCTTAACTGTATCTTT+AGG | + | chr1_3:57554117-57554136 | None:intergenic | 35.0% | |
| AATTACACAGTTGTGCTTGA+GGG | + | chr1_3:57554453-57554472 | None:intergenic | 35.0% | |
| AGTTGGATTTCGATATGCAT+TGG | - | chr1_3:57554488-57554507 | Msa0127920:intron | 35.0% | |
| GATATGCATTGGACATTCTA+CGG | - | chr1_3:57554499-57554518 | Msa0127920:intron | 35.0% | |
| ATATGCATTGGACATTCTAC+GGG | - | chr1_3:57554500-57554519 | Msa0127920:intron | 35.0% | |
| TCGAACTGTTGAAGAATTGA+AGG | - | chr1_3:57554686-57554705 | Msa0127920:intron | 35.0% | |
| GTTATATGGTTCCTGCATTA+AGG | + | chr1_3:57555066-57555085 | None:intergenic | 35.0% | |
| ATCTCCTGTGAAACGTTATA+TGG | + | chr1_3:57555080-57555099 | None:intergenic | 35.0% | |
| ATATAACGTTTCACAGGAGA+TGG | - | chr1_3:57555079-57555098 | Msa0127920:intron | 35.0% | |
| ! | ACAGTTCTAATTTCATTCCC+AGG | + | chr1_3:57555547-57555566 | None:intergenic | 35.0% |
| CCTACTCTCAGTGAAAATAT+AGG | + | chr1_3:57555589-57555608 | None:intergenic | 35.0% | |
| ! | CCTATATTTTCACTGAGAGT+AGG | - | chr1_3:57555586-57555605 | Msa0127920:intron | 35.0% |
| AATTGGGGAAACCAAATTTG+TGG | - | chr1_3:57555631-57555650 | Msa0127920:CDS | 35.0% | |
| TTATCTGTCGATATCATGGA+AGG | + | chr1_3:57555856-57555875 | None:intergenic | 35.0% | |
| TGCATTATCTGTCGATATCA+TGG | + | chr1_3:57555860-57555879 | None:intergenic | 35.0% | |
| TGTCAACAGAAAAGAGACAT+CGG | + | chr1_3:57555939-57555958 | None:intergenic | 35.0% | |
| ! | TTCTTTCTCTTTTTGTGCTG+GGG | + | chr1_3:57555997-57556016 | None:intergenic | 35.0% |
| ! | GTTCTTTCTCTTTTTGTGCT+GGG | + | chr1_3:57555998-57556017 | None:intergenic | 35.0% |
| ! | TGTTCTTTCTCTTTTTGTGC+TGG | + | chr1_3:57555999-57556018 | None:intergenic | 35.0% |
| TATTCAAGAACCTATGCACT+TGG | - | chr1_3:57556227-57556246 | Msa0127920:intron | 35.0% | |
| ATCAAACTTTGCTGGAACTT+GGG | - | chr1_3:57556306-57556325 | Msa0127920:intron | 35.0% | |
| TCAACCACTTGGTTTACTTT+GGG | - | chr1_3:57556669-57556688 | Msa0127920:intron | 35.0% | |
| TTAAGACACTACTTGAGCTA+AGG | + | chr1_3:57556782-57556801 | None:intergenic | 35.0% | |
| ATTGTAGACACACTTGATCA+TGG | + | chr1_3:57556885-57556904 | None:intergenic | 35.0% | |
| GGTTCAAACTTAAATGAGCT+TGG | + | chr1_3:57557113-57557132 | None:intergenic | 35.0% | |
| ! | AGCTCATTTAAGTTTGAACC+TGG | - | chr1_3:57557113-57557132 | Msa0127920:intron | 35.0% |
| TTTCTATTAGAAGCCTAAGG+AGG | + | chr1_3:57557184-57557203 | None:intergenic | 35.0% | |
| ! | TCTTCAAAAAAAGGAAGTGC+AGG | + | chr1_3:57557304-57557323 | None:intergenic | 35.0% |
| GTTAGTGAACAAACCAATGT+TGG | + | chr1_3:57557554-57557573 | None:intergenic | 35.0% | |
| CCGTGATTTGAGAAAAAGAA+TGG | + | chr1_3:57557775-57557794 | None:intergenic | 35.0% | |
| TTCCAGATAACACAAGTTCT+GGG | - | chr1_3:57557858-57557877 | Msa0127920:intron | 35.0% | |
| ATTGTATGCATGCAATGAAC+TGG | - | chr1_3:57557960-57557979 | Msa0127920:intron | 35.0% | |
| AGGGGAAAGAATTGGTAAAA+GGG | - | chr1_3:57557987-57558006 | Msa0127920:intron | 35.0% | |
| TGAATTGAAGCTCTTACTAG+GGG | + | chr1_3:57558234-57558253 | None:intergenic | 35.0% | |
| GTGAATTGAAGCTCTTACTA+GGG | + | chr1_3:57558235-57558254 | None:intergenic | 35.0% | |
| ATAAAGTTCACTTCCTCTGT+GGG | + | chr1_3:57558557-57558576 | None:intergenic | 35.0% | |
| AATAAAGTTCACTTCCTCTG+TGG | + | chr1_3:57558558-57558577 | None:intergenic | 35.0% | |
| CATAAGCATCTGCAAATTTC+TGG | + | chr1_3:57558683-57558702 | None:intergenic | 35.0% | |
| ! | TTTTTGTCCGAGGTTCAAAC+CGG | + | chr1_3:57550748-57550767 | None:intergenic | 40.0% |
| ACTGTGCTGTAAGACTGTAA+TGG | - | chr1_3:57550844-57550863 | Msa0127920:three_prime_UTR | 40.0% | |
| CTGAAGTGGGAAGGAAAAAT+TGG | + | chr1_3:57551056-57551075 | None:intergenic | 40.0% | |
| ! | CAATTTTTCCTTCCCACTTC+AGG | - | chr1_3:57551054-57551073 | Msa0127920:CDS | 40.0% |
| CTAGAATTCTTCTCCTGAAG+TGG | + | chr1_3:57551070-57551089 | None:intergenic | 40.0% | |
| TGGTTAAACCCTAAGTGCTT+TGG | + | chr1_3:57551115-57551134 | None:intergenic | 40.0% | |
| AAATCAACTGCTGGCATAAG+AGG | + | chr1_3:57551219-57551238 | None:intergenic | 40.0% | |
| AACAGAGACAAATCAACTGC+TGG | + | chr1_3:57551228-57551247 | None:intergenic | 40.0% | |
| AAAGCCTCCTTCAGACAAAA+AGG | - | chr1_3:57551254-57551273 | Msa0127920:intron | 40.0% | |
| CAAAATTAGAGTCGGAAACG+GGG | - | chr1_3:57551348-57551367 | Msa0127920:intron | 40.0% | |
| AATAACTTACGTACTCCCTC+CGG | - | chr1_3:57551840-57551859 | Msa0127920:CDS | 40.0% | |
| !! | GTCTGTTTGGCACTTGTTTT+TGG | - | chr1_3:57552346-57552365 | Msa0127920:intron | 40.0% |
| !!! | TTTGGCACTTGTTTTTGGGT+AGG | - | chr1_3:57552351-57552370 | Msa0127920:intron | 40.0% |
| !!! | ACTTGTTTTTGGGTAGGTTG+AGG | - | chr1_3:57552357-57552376 | Msa0127920:intron | 40.0% |
| ! | TAGGTTGAGGAATTCATGCA+TGG | - | chr1_3:57552370-57552389 | Msa0127920:intron | 40.0% |
| GCATGTACTATCCACCTATT+TGG | + | chr1_3:57552460-57552479 | None:intergenic | 40.0% | |
| ! | TCCCTAACCAAGTTTTCTAG+AGG | - | chr1_3:57552619-57552638 | Msa0127920:intron | 40.0% |
| ! | GACCTCTAGAAAACTTGGTT+AGG | + | chr1_3:57552624-57552643 | None:intergenic | 40.0% |
| TTGAAGCCTAAACAATGTCC+GGG | + | chr1_3:57552710-57552729 | None:intergenic | 40.0% | |
| CTTGAAGCCTAAACAATGTC+CGG | + | chr1_3:57552711-57552730 | None:intergenic | 40.0% | |
| AGCTCATACAAGAGCCATTT+GGG | + | chr1_3:57552734-57552753 | None:intergenic | 40.0% | |
| TTTCCCTCATTCAGGTCATT+TGG | - | chr1_3:57552840-57552859 | Msa0127920:intron | 40.0% | |
| ATGATCTTCAGCTTCACCAT+TGG | - | chr1_3:57552897-57552916 | Msa0127920:intron | 40.0% | |
| TGATCTTCAGCTTCACCATT+GGG | - | chr1_3:57552898-57552917 | Msa0127920:intron | 40.0% | |
| TGGAAATATTGCCTCTTCCA+TGG | - | chr1_3:57552980-57552999 | Msa0127920:intron | 40.0% | |
| TAAGGATATGCATCGGAATG+CGG | + | chr1_3:57553016-57553035 | None:intergenic | 40.0% | |
| !!! | CAATCTGTTTTGGTGGTGTA+AGG | + | chr1_3:57553034-57553053 | None:intergenic | 40.0% |
| !! | CTTCATGCAATCTGTTTTGG+TGG | + | chr1_3:57553041-57553060 | None:intergenic | 40.0% |
| ! | GATTGCATGAAGTGTTTCCT+TGG | - | chr1_3:57553049-57553068 | Msa0127920:intron | 40.0% |
| GTGAATCTGGCACATTATTC+TGG | + | chr1_3:57553078-57553097 | None:intergenic | 40.0% | |
| CGTTATAAATGCAACGGAGT+TGG | + | chr1_3:57553108-57553127 | None:intergenic | 40.0% | |
| CTAAACAATCAATGTGGGGT+GGG | - | chr1_3:57553156-57553175 | Msa0127920:CDS | 40.0% | |
| TAAACAATCAATGTGGGGTG+GGG | - | chr1_3:57553157-57553176 | Msa0127920:CDS | 40.0% | |
| !! | GGAATGGATTTGGTAATGAG+TGG | - | chr1_3:57553178-57553197 | Msa0127920:CDS | 40.0% |
| ! | TGCAAGAATCTTGTTTGCTG+CGG | - | chr1_3:57553205-57553224 | Msa0127920:CDS | 40.0% |
| !!! | CAATGGAGGCTTGTCATTTT+AGG | + | chr1_3:57553340-57553359 | None:intergenic | 40.0% |
| CTAAAATGACAAGCCTCCAT+TGG | - | chr1_3:57553338-57553357 | Msa0127920:intron | 40.0% | |
| TTAATTGTCCTTGCCAATGG+AGG | + | chr1_3:57553354-57553373 | None:intergenic | 40.0% | |
| AGCTTAATTGTCCTTGCCAA+TGG | + | chr1_3:57553357-57553376 | None:intergenic | 40.0% | |
| TGAGAGCAGAGAGACTAAAT+GGG | - | chr1_3:57553451-57553470 | Msa0127920:intron | 40.0% | |
| TAAATGGTGTTCCACCAACA+GGG | - | chr1_3:57553662-57553681 | Msa0127920:CDS | 40.0% | |
| AATGCTAATGAGTGCCCTTA+GGG | + | chr1_3:57554243-57554262 | None:intergenic | 40.0% | |
| AAATGCTAATGAGTGCCCTT+AGG | + | chr1_3:57554244-57554263 | None:intergenic | 40.0% | |
| AAGATGCAGATGCAAAGTGA+CGG | + | chr1_3:57554389-57554408 | None:intergenic | 40.0% | |
| GAATTACACAGTTGTGCTTG+AGG | + | chr1_3:57554454-57554473 | None:intergenic | 40.0% | |
| TATGTAGAAATGGACCAAGG+AGG | - | chr1_3:57554587-57554606 | Msa0127920:CDS | 40.0% | |
| !! | AACTGTTTGACTTGTGTGAG+AGG | - | chr1_3:57554619-57554638 | Msa0127920:intron | 40.0% |
| CTTCAACAGTTCGAGATGAA+GGG | + | chr1_3:57554680-57554699 | None:intergenic | 40.0% | |
| TCTTCAACAGTTCGAGATGA+AGG | + | chr1_3:57554681-57554700 | None:intergenic | 40.0% | |
| GCAACATCCTAATGCTGAAA+AGG | + | chr1_3:57555015-57555034 | None:intergenic | 40.0% | |
| TTATTCTCCCTCCTTAATGC+AGG | - | chr1_3:57555052-57555071 | Msa0127920:intron | 40.0% | |
| TATGGTTCCTGCATTAAGGA+GGG | + | chr1_3:57555062-57555081 | None:intergenic | 40.0% | |
| ATATGGTTCCTGCATTAAGG+AGG | + | chr1_3:57555063-57555082 | None:intergenic | 40.0% | |
| GGAACCATATAACGTTTCAC+AGG | - | chr1_3:57555073-57555092 | Msa0127920:intron | 40.0% | |
| ! | CTTTGTTTGAGAGAGGATCA+GGG | + | chr1_3:57555123-57555142 | None:intergenic | 40.0% |
| !! | CTTGTTGCTTTGTTTGAGAG+AGG | + | chr1_3:57555130-57555149 | None:intergenic | 40.0% |
| TGAATTACGCATAACGACCA+AGG | - | chr1_3:57555307-57555326 | Msa0127920:intron | 40.0% | |
| ! | AGTATTTGAGGTTCACTAGC+AGG | + | chr1_3:57555444-57555463 | None:intergenic | 40.0% |
| !! | TTTTTATTTGTTCAGGGGCC+TGG | - | chr1_3:57555526-57555545 | Msa0127920:intron | 40.0% |
| !! | TTTTATTTGTTCAGGGGCCT+GGG | - | chr1_3:57555527-57555546 | Msa0127920:intron | 40.0% |
| ! | TGAGTTGGATGTTGCTTCAA+AGG | - | chr1_3:57555750-57555769 | Msa0127920:intron | 40.0% |
| TTGTGCAAACGTTACAGAGA+GGG | - | chr1_3:57555774-57555793 | Msa0127920:CDS | 40.0% | |
| TGATGGAGATACAGTTTCAC+CGG | + | chr1_3:57555806-57555825 | None:intergenic | 40.0% | |
| TTAACTTACCATGCGAAGAG+AGG | + | chr1_3:57555893-57555912 | None:intergenic | 40.0% | |
| AGAGACATCGGGTGAATAAT+TGG | + | chr1_3:57555927-57555946 | None:intergenic | 40.0% | |
| GTCAACAGAAAAGAGACATC+GGG | + | chr1_3:57555938-57555957 | None:intergenic | 40.0% | |
| ! | TCTTTCTCTTTTTGTGCTGG+GGG | + | chr1_3:57555996-57556015 | None:intergenic | 40.0% |
| AACCTATGCACTTGGACAAA+TGG | - | chr1_3:57556235-57556254 | Msa0127920:intron | 40.0% | |
| ! | ACGTGTTGATCAAACTTTGC+TGG | - | chr1_3:57556298-57556317 | Msa0127920:intron | 40.0% |
| GATCAAACTTTGCTGGAACT+TGG | - | chr1_3:57556305-57556324 | Msa0127920:intron | 40.0% | |
| TCAAACTTTGCTGGAACTTG+GGG | - | chr1_3:57556307-57556326 | Msa0127920:intron | 40.0% | |
| !! | ATTTTAACCCTCCTGTTCCT+AGG | - | chr1_3:57556513-57556532 | Msa0127920:intron | 40.0% |
| ! | TTTTAACCCTCCTGTTCCTA+GGG | - | chr1_3:57556514-57556533 | Msa0127920:intron | 40.0% |
| TCAGTTAAGGACGAAACGTT+CGG | + | chr1_3:57556629-57556648 | None:intergenic | 40.0% | |
| CTCAACCACTTGGTTTACTT+TGG | - | chr1_3:57556668-57556687 | Msa0127920:intron | 40.0% | |
| CAACCACTTGGTTTACTTTG+GGG | - | chr1_3:57556670-57556689 | Msa0127920:intron | 40.0% | |
| AACCACTTGGTTTACTTTGG+GGG | - | chr1_3:57556671-57556690 | Msa0127920:intron | 40.0% | |
| !!! | AGCTCTTTTAGAGCTTGACT+TGG | - | chr1_3:57556752-57556771 | Msa0127920:intron | 40.0% |
| TCAAACATAAATGGCTCGTG+TGG | - | chr1_3:57556927-57556946 | Msa0127920:intron | 40.0% | |
| TTATGAACACATACTGAGCC+AGG | + | chr1_3:57557134-57557153 | None:intergenic | 40.0% | |
| TTTGCTAGGGTGATTGGAAT+TGG | + | chr1_3:57557278-57557297 | None:intergenic | 40.0% | |
| ! | AGGTATTTTGCTAGGGTGAT+TGG | + | chr1_3:57557284-57557303 | None:intergenic | 40.0% |
| ! | GAAGTGCAGGTATTTTGCTA+GGG | + | chr1_3:57557291-57557310 | None:intergenic | 40.0% |
| ! | TGCAGGTCAATTTGAAACCA+AGG | - | chr1_3:57557386-57557405 | Msa0127920:intron | 40.0% |
| ! | GCAGGTCAATTTGAAACCAA+GGG | - | chr1_3:57557387-57557406 | Msa0127920:intron | 40.0% |
| ! | TCTGCACAAACAGCTTTTGT+TGG | + | chr1_3:57557415-57557434 | None:intergenic | 40.0% |
| !! | CTGTTTCTGAAGATTCAGCA+AGG | + | chr1_3:57557467-57557486 | None:intergenic | 40.0% |
| CTTGCTGAATCTTCAGAAAC+AGG | - | chr1_3:57557465-57557484 | Msa0127920:intron | 40.0% | |
| AGGATTACCAACACCAACAT+TGG | - | chr1_3:57557538-57557557 | Msa0127920:intron | 40.0% | |
| GAACAAACCAATGTTGGTGT+TGG | + | chr1_3:57557548-57557567 | None:intergenic | 40.0% | |
| GTTTCAGCTGCAAAATAAGG+AGG | - | chr1_3:57557598-57557617 | Msa0127920:intron | 40.0% | |
| ! | GAAGGTTCATCTTTTCGTGA+CGG | - | chr1_3:57557623-57557642 | Msa0127920:intron | 40.0% |
| ! | AAGGTTCATCTTTTCGTGAC+GGG | - | chr1_3:57557624-57557643 | Msa0127920:intron | 40.0% |
| GTTCCAGATAACACAAGTTC+TGG | - | chr1_3:57557857-57557876 | Msa0127920:intron | 40.0% | |
| TCCAGATAACACAAGTTCTG+GGG | - | chr1_3:57557859-57557878 | Msa0127920:intron | 40.0% | |
| CTTGGAGAAATTCAGATAGC+AGG | + | chr1_3:57557911-57557930 | None:intergenic | 40.0% | |
| ! | CATGCAATGAACTGGTTTCA+GGG | - | chr1_3:57557968-57557987 | Msa0127920:intron | 40.0% |
| ! | ATGCAATGAACTGGTTTCAG+GGG | - | chr1_3:57557969-57557988 | Msa0127920:intron | 40.0% |
| CAGGGGAAAGAATTGGTAAA+AGG | - | chr1_3:57557986-57558005 | Msa0127920:intron | 40.0% | |
| ! | TAAAAGGGATCAAAAGCGCA+AGG | - | chr1_3:57558002-57558021 | Msa0127920:intron | 40.0% |
| !! | TTCTGTCTTTTTGATTGGGC+TGG | + | chr1_3:57558184-57558203 | None:intergenic | 40.0% |
| GGTGAATTGAAGCTCTTACT+AGG | + | chr1_3:57558236-57558255 | None:intergenic | 40.0% | |
| TCCACTGTAGTCACTAAATG+AGG | - | chr1_3:57558320-57558339 | Msa0127920:intron | 40.0% | |
| ACCTCATTTAGTGACTACAG+TGG | + | chr1_3:57558324-57558343 | None:intergenic | 40.0% | |
| AGGTTTGCATGCTTTCTGTT+AGG | - | chr1_3:57558340-57558359 | Msa0127920:intron | 40.0% | |
| TTTGCATGCTTTCTGTTAGG+TGG | - | chr1_3:57558343-57558362 | Msa0127920:intron | 40.0% | |
| TACAAATCGCAACACCATTC+CGG | + | chr1_3:57558372-57558391 | None:intergenic | 40.0% | |
| TAAAGTTCACTTCCTCTGTG+GGG | + | chr1_3:57558556-57558575 | None:intergenic | 40.0% | |
| CAAATCCTAATGAGCTTGGT+TGG | + | chr1_3:57558629-57558648 | None:intergenic | 40.0% | |
| ! | CTAAAGTCCGGTTTGAACCT+CGG | - | chr1_3:57550738-57550757 | Msa0127920:three_prime_UTR | 45.0% |
| AGCTCAAAACTTTGGCGCTT+CGG | - | chr1_3:57550879-57550898 | Msa0127920:three_prime_UTR | 45.0% | |
| ATTCTTCTCCTGAAGTGGGA+AGG | + | chr1_3:57551065-57551084 | None:intergenic | 45.0% | |
| TCAGGAGAAGAATTCTAGCG+AGG | - | chr1_3:57551072-57551091 | Msa0127920:CDS | 45.0% | |
| TAGGTGTATGCACTTACTGG+TGG | - | chr1_3:57551186-57551205 | Msa0127920:intron | 45.0% | |
| !! | AGCACAACTGGTTTGAGGTA+AGG | - | chr1_3:57551377-57551396 | Msa0127920:intron | 45.0% |
| !! | GCACAACTGGTTTGAGGTAA+GGG | - | chr1_3:57551378-57551397 | Msa0127920:intron | 45.0% |
| ! | TGGTTTGAGGTAAGGGATCA+GGG | - | chr1_3:57551385-57551404 | Msa0127920:intron | 45.0% |
| AGGGATCAGGGTTCAAAACT+TGG | - | chr1_3:57551397-57551416 | Msa0127920:intron | 45.0% | |
| TCTTTACTCTTGTGCCCCAT+AGG | - | chr1_3:57551632-57551651 | Msa0127920:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1_3:57552231-57552250 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1_3:57552232-57552251 | None:intergenic | 45.0% |
| CCAAACAGACTAAACCAGCA+AGG | + | chr1_3:57552336-57552355 | None:intergenic | 45.0% | |
| !! | CCTTGCTGGTTTAGTCTGTT+TGG | - | chr1_3:57552333-57552352 | Msa0127920:intron | 45.0% |
| ! | GGATCGACCTCTAGAAAACT+TGG | + | chr1_3:57552629-57552648 | None:intergenic | 45.0% |
| AACAATATGTTGTGTGGGCC+CGG | - | chr1_3:57552689-57552708 | Msa0127920:intron | 45.0% | |
| GTTTAGGCTTCAAGCCCAAA+TGG | - | chr1_3:57552717-57552736 | Msa0127920:intron | 45.0% | |
| CAGCTCATACAAGAGCCATT+TGG | + | chr1_3:57552735-57552754 | None:intergenic | 45.0% | |
| TCGCCAAATGACCTGAATGA+GGG | + | chr1_3:57552846-57552865 | None:intergenic | 45.0% | |
| ATCGCCAAATGACCTGAATG+AGG | + | chr1_3:57552847-57552866 | None:intergenic | 45.0% | |
| TCATTCAGGTCATTTGGCGA+TGG | - | chr1_3:57552846-57552865 | Msa0127920:intron | 45.0% | |
| ! | GTTGTTGACTACCATGGAAG+AGG | + | chr1_3:57552994-57553013 | None:intergenic | 45.0% |
| ! | AATGCGGTTGTTGACTACCA+TGG | + | chr1_3:57553000-57553019 | None:intergenic | 45.0% |
| GGTGGTGTAAGGATATGCAT+CGG | + | chr1_3:57553023-57553042 | None:intergenic | 45.0% | |
| GCACATTATTCTGGCAACCA+AGG | + | chr1_3:57553069-57553088 | None:intergenic | 45.0% | |
| AGTTGGGGTTCTTGTGAATC+TGG | + | chr1_3:57553091-57553110 | None:intergenic | 45.0% | |
| GCTAAACAATCAATGTGGGG+TGG | - | chr1_3:57553155-57553174 | Msa0127920:CDS | 45.0% | |
| ! | GCAAGAATCTTGTTTGCTGC+GGG | - | chr1_3:57553206-57553225 | Msa0127920:CDS | 45.0% |
| ! | CAAGAATCTTGTTTGCTGCG+GGG | - | chr1_3:57553207-57553226 | Msa0127920:CDS | 45.0% |
| ACAATTAAGCTCCAGCAGTG+AGG | - | chr1_3:57553366-57553385 | Msa0127920:intron | 45.0% | |
| CAATTAAGCTCCAGCAGTGA+GGG | - | chr1_3:57553367-57553386 | Msa0127920:intron | 45.0% | |
| AGTGAGGGTTGCGTGTTTAA+AGG | - | chr1_3:57553382-57553401 | Msa0127920:intron | 45.0% | |
| GTGAGGGTTGCGTGTTTAAA+GGG | - | chr1_3:57553383-57553402 | Msa0127920:intron | 45.0% | |
| CTGAGAGCAGAGAGACTAAA+TGG | - | chr1_3:57553450-57553469 | Msa0127920:intron | 45.0% | |
| GTAAATGGTGTTCCACCAAC+AGG | - | chr1_3:57553661-57553680 | Msa0127920:CDS | 45.0% | |
| AAATGGTGTTCCACCAACAG+GGG | - | chr1_3:57553663-57553682 | Msa0127920:CDS | 45.0% | |
| AAAGAATAGTCCCCTGTTGG+TGG | + | chr1_3:57553676-57553695 | None:intergenic | 45.0% | |
| GCAAAAGAATAGTCCCCTGT+TGG | + | chr1_3:57553679-57553698 | None:intergenic | 45.0% | |
| TCAGTCTTTACCTTCATGCC+TGG | - | chr1_3:57553724-57553743 | Msa0127920:CDS | 45.0% | |
| AAAATGCAGACCAGGCATGA+AGG | + | chr1_3:57553737-57553756 | None:intergenic | 45.0% | |
| CATAACAAGATACACGGACG+AGG | - | chr1_3:57553838-57553857 | Msa0127920:intron | 45.0% | |
| CAGTTGATCTGTTTCCTCCT+TGG | + | chr1_3:57554604-57554623 | None:intergenic | 45.0% | |
| TCCTGGCAATTAACATAGCC+CGG | + | chr1_3:57554859-57554878 | None:intergenic | 45.0% | |
| TGCCAGGAATCCATCTTCTA+CGG | - | chr1_3:57554871-57554890 | Msa0127920:intron | 45.0% | |
| ! | ATCCGTAGAAGATGGATTCC+TGG | + | chr1_3:57554876-57554895 | None:intergenic | 45.0% |
| ACTGCAACATCCGTAGAAGA+TGG | + | chr1_3:57554884-57554903 | None:intergenic | 45.0% | |
| ATCTTCTACGGATGTTGCAG+TGG | - | chr1_3:57554883-57554902 | Msa0127920:intron | 45.0% | |
| !! | GCTTTGTTTGAGAGAGGATC+AGG | + | chr1_3:57555124-57555143 | None:intergenic | 45.0% |
| ACAAGAGCGAAGAGATGAAG+AGG | - | chr1_3:57555145-57555164 | Msa0127920:intron | 45.0% | |
| AACATCCAACTCAGACTCTC+GGG | + | chr1_3:57555743-57555762 | None:intergenic | 45.0% | |
| CAACATCCAACTCAGACTCT+CGG | + | chr1_3:57555744-57555763 | None:intergenic | 45.0% | |
| CTTGTGCAAACGTTACAGAG+AGG | - | chr1_3:57555773-57555792 | Msa0127920:CDS | 45.0% | |
| ATGGAGATACAGTTTCACCG+GGG | + | chr1_3:57555804-57555823 | None:intergenic | 45.0% | |
| GATGGAGATACAGTTTCACC+GGG | + | chr1_3:57555805-57555824 | None:intergenic | 45.0% | |
| GGTGGAAGTTCTGTCTTTGA+TGG | + | chr1_3:57555823-57555842 | None:intergenic | 45.0% | |
| ! | ATCATGGAAGGCACGACTAT+TGG | + | chr1_3:57555844-57555863 | None:intergenic | 45.0% |
| CACCATTTGTCCAAGTGCAT+AGG | + | chr1_3:57556240-57556259 | None:intergenic | 45.0% | |
| GACTACAACAGGGAGGATAA+AGG | + | chr1_3:57556370-57556389 | None:intergenic | 45.0% | |
| GCTGCTACATGACTACAACA+GGG | + | chr1_3:57556380-57556399 | None:intergenic | 45.0% | |
| AGCTGCTACATGACTACAAC+AGG | + | chr1_3:57556381-57556400 | None:intergenic | 45.0% | |
| TTTAACCCTCCTGTTCCTAG+GGG | - | chr1_3:57556515-57556534 | Msa0127920:intron | 45.0% | |
| ATGGTAATCCGGACTTAGCT+GGG | - | chr1_3:57556547-57556566 | Msa0127920:intron | 45.0% | |
| TTCCTGACTGGAACAATCCT+TGG | + | chr1_3:57556590-57556609 | None:intergenic | 45.0% | |
| TTCCAGTCAGGAATCGAACT+CGG | - | chr1_3:57556597-57556616 | Msa0127920:CDS | 45.0% | |
| CAGTTAAGGACGAAACGTTC+GGG | + | chr1_3:57556628-57556647 | None:intergenic | 45.0% | |
| AACCCCCAAAGTAAACCAAG+TGG | + | chr1_3:57556676-57556695 | None:intergenic | 45.0% | |
| ! | CTTGGTTTACTTTGGGGGTT+TGG | - | chr1_3:57556676-57556695 | Msa0127920:intron | 45.0% |
| !!! | GGGGTTTGGTTTTGAGATTG+TGG | - | chr1_3:57556690-57556709 | Msa0127920:intron | 45.0% |
| !! | TAGAAGCCTAAGGAGGCATT+TGG | + | chr1_3:57557177-57557196 | None:intergenic | 45.0% |
| !! | GGAAGTGCAGGTATTTTGCT+AGG | + | chr1_3:57557292-57557311 | None:intergenic | 45.0% |
| ! | ACAGCTTTTGTTGGAACCCT+TGG | + | chr1_3:57557406-57557425 | None:intergenic | 45.0% |
| CTGCAAAATAAGGAGGCTGA+AGG | - | chr1_3:57557605-57557624 | Msa0127920:intron | 45.0% | |
| ! | CCAGATAACACAAGTTCTGG+GGG | - | chr1_3:57557860-57557879 | Msa0127920:intron | 45.0% |
| ! | GCATGCAATGAACTGGTTTC+AGG | - | chr1_3:57557967-57557986 | Msa0127920:intron | 45.0% |
| CTGGTTTCAGGGGAAAGAAT+TGG | - | chr1_3:57557979-57557998 | Msa0127920:intron | 45.0% | |
| ACGTTACCTGTAAATGCGTC+TGG | - | chr1_3:57558133-57558152 | Msa0127920:intron | 45.0% | |
| AGCAGTGAACTCAAAACTCC+TGG | - | chr1_3:57558430-57558449 | Msa0127920:CDS | 45.0% | |
| TAACCACAATCAGAACTGCC+AGG | + | chr1_3:57558451-57558470 | None:intergenic | 45.0% | |
| CATCAAATACATCCCCACAG+AGG | - | chr1_3:57558541-57558560 | Msa0127920:five_prime_UTR | 45.0% | |
| !! | ATAAATAATACTTATTAAAA+GGG | + | chr1_3:57555184-57555203 | None:intergenic | 5.0% |
| !! | TATAAATAATACTTATTAAA+AGG | + | chr1_3:57555185-57555204 | None:intergenic | 5.0% |
| !! | TTTAATAAGTATTATTTATA+TGG | - | chr1_3:57555185-57555204 | Msa0127920:intron | 5.0% |
| !!! | TTCTTTTTAATTAAATTTTT+AGG | - | chr1_3:57557690-57557709 | Msa0127920:intron | 5.0% |
| !!! | TTTATTTATTTATTTTATCT+TGG | - | chr1_3:57558108-57558127 | Msa0127920:intron | 5.0% |
| ATTAGAGTCGGAAACGGGGT+TGG | - | chr1_3:57551352-57551371 | Msa0127920:intron | 50.0% | |
| TTAGAGTCGGAAACGGGGTT+GGG | - | chr1_3:57551353-57551372 | Msa0127920:intron | 50.0% | |
| !! | TGGGTAGCACAACTGGTTTG+AGG | - | chr1_3:57551372-57551391 | Msa0127920:intron | 50.0% |
| ! | CTGGTTTGAGGTAAGGGATC+AGG | - | chr1_3:57551384-57551403 | Msa0127920:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr1_3:57552227-57552246 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1_3:57552233-57552252 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1_3:57552230-57552249 | Msa0127920:intron | 50.0% | |
| GCAAGGAACTTTCAAGCGAG+TGG | + | chr1_3:57552319-57552338 | None:intergenic | 50.0% | |
| CTCGCTTGAAAGTTCCTTGC+TGG | - | chr1_3:57552319-57552338 | Msa0127920:intron | 50.0% | |
| CGATGCAGATATTGGGGGAA+CGG | - | chr1_3:57553126-57553145 | Msa0127920:intron | 50.0% | |
| GATGCAGATATTGGGGGAAC+GGG | - | chr1_3:57553127-57553146 | Msa0127920:intron | 50.0% | |
| AATCAATGTGGGGTGGGGAA+TGG | - | chr1_3:57553162-57553181 | Msa0127920:CDS | 50.0% | |
| TCGTCACATGTCTCTCAGCA+TGG | - | chr1_3:57553267-57553286 | Msa0127920:intron | 50.0% | |
| TCTCTCAGCATGGACTTGCA+TGG | - | chr1_3:57553277-57553296 | Msa0127920:intron | 50.0% | |
| CTCTCAGCATGGACTTGCAT+GGG | - | chr1_3:57553278-57553297 | Msa0127920:intron | 50.0% | |
| GGACTTGCATGGGAGAAGAT+TGG | - | chr1_3:57553288-57553307 | Msa0127920:intron | 50.0% | |
| ATGACAAGCCTCCATTGGCA+AGG | - | chr1_3:57553343-57553362 | Msa0127920:intron | 50.0% | |
| AGGGTTGCGTGTTTAAAGGG+AGG | - | chr1_3:57553386-57553405 | Msa0127920:intron | 50.0% | |
| AATGAGTGCCCTTAGGGCAT+TGG | + | chr1_3:57554237-57554256 | None:intergenic | 50.0% | |
| GCAGATGCAAAGTGACGGTT+AGG | + | chr1_3:57554384-57554403 | None:intergenic | 50.0% | |
| CCTGGCAATTAACATAGCCC+GGG | + | chr1_3:57554858-57554877 | None:intergenic | 50.0% | |
| TGCAGTGGATCCACTTGTTC+AGG | - | chr1_3:57554898-57554917 | Msa0127920:intron | 50.0% | |
| TGGATCCACTTGTTCAGGTG+TGG | - | chr1_3:57554903-57554922 | Msa0127920:intron | 50.0% | |
| ACGTTTCACAGGAGATGGAG+CGG | - | chr1_3:57555084-57555103 | Msa0127920:intron | 50.0% | |
| AGATACAGTTTCACCGGGGT+TGG | + | chr1_3:57555800-57555819 | None:intergenic | 50.0% | |
| ! | ATGGAAGGCACGACTATTGG+TGG | + | chr1_3:57555841-57555860 | None:intergenic | 50.0% |
| TACCATAGCCTCTCTTCGCA+TGG | - | chr1_3:57555882-57555901 | Msa0127920:intron | 50.0% | |
| TACCATGCGAAGAGAGGCTA+TGG | + | chr1_3:57555887-57555906 | None:intergenic | 50.0% | |
| ! | TCTTTTTGTGCTGGGGGAAC+AGG | + | chr1_3:57555990-57556009 | None:intergenic | 50.0% |
| CAATCTGCAAGCTCATCAGC+TGG | - | chr1_3:57556260-57556279 | Msa0127920:intron | 50.0% | |
| CAAGCTCATCAGCTGGACTT+CGG | - | chr1_3:57556267-57556286 | Msa0127920:intron | 50.0% | |
| GCTACATGACTACAACAGGG+AGG | + | chr1_3:57556377-57556396 | None:intergenic | 50.0% | |
| CAGCTAAGTCCGGATTACCA+TGG | + | chr1_3:57556548-57556567 | None:intergenic | 50.0% | |
| CATGGTAATCCGGACTTAGC+TGG | - | chr1_3:57556546-57556565 | Msa0127920:intron | 50.0% | |
| ACTTACCTCCCAGCTAAGTC+CGG | + | chr1_3:57556558-57556577 | None:intergenic | 50.0% | |
| GCTGGGAGGTAAGTAAAGTC+CGG | - | chr1_3:57556564-57556583 | Msa0127920:CDS | 50.0% | |
| AGGTAAGTAAAGTCCGGCCA+AGG | - | chr1_3:57556570-57556589 | Msa0127920:CDS | 50.0% | |
| TGACTGGAACAATCCTTGGC+CGG | + | chr1_3:57556586-57556605 | None:intergenic | 50.0% | |
| TCCAGTCAGGAATCGAACTC+GGG | - | chr1_3:57556598-57556617 | Msa0127920:CDS | 50.0% | |
| ACCACTTGAGCTCAACCACT+TGG | - | chr1_3:57556658-57556677 | Msa0127920:intron | 50.0% | |
| ACCAAGTGGTTGAGCTCAAG+TGG | + | chr1_3:57556662-57556681 | None:intergenic | 50.0% | |
| GCTCTTCCAAATGCCTCCTT+AGG | - | chr1_3:57557168-57557187 | Msa0127920:intron | 50.0% | |
| CGAAACAACGGGAACACCAA+AGG | - | chr1_3:57557655-57557674 | Msa0127920:intron | 50.0% | |
| CCCCCAGAACTTGTGTTATC+TGG | + | chr1_3:57557863-57557882 | None:intergenic | 50.0% | |
| ! | GGGATCAAAAGCGCAAGGTA+CGG | - | chr1_3:57558007-57558026 | Msa0127920:intron | 50.0% |
| TGTCGTCCAGACGCATTTAC+AGG | + | chr1_3:57558142-57558161 | None:intergenic | 50.0% | |
| GCTTTCTGTTAGGTGGCAAC+CGG | - | chr1_3:57558350-57558369 | Msa0127920:intron | 50.0% | |
| ! | ACTCCTGGCAGTTCTGATTG+TGG | - | chr1_3:57558445-57558464 | Msa0127920:exon | 50.0% |
| CAGTGCTACATGGAGCAATG+AGG | - | chr1_3:57558507-57558526 | Msa0127920:five_prime_UTR | 50.0% | |
| TTAGAGTGATACCAGCCACC+AGG | - | chr1_3:57558594-57558613 | Msa0127920:five_prime_UTR | 50.0% | |
| AGGGACCAACCAAGCTCATT+AGG | - | chr1_3:57558621-57558640 | Msa0127920:five_prime_UTR | 50.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1_3:57552225-57552244 | Msa0127920:intron | 55.0% | |
| TGTGGGCCCGGACATTGTTT+AGG | - | chr1_3:57552701-57552720 | Msa0127920:intron | 55.0% | |
| ! | TGTGGGGTGGGGAATGGATT+TGG | - | chr1_3:57553168-57553187 | Msa0127920:CDS | 55.0% |
| AAACACGCAACCCTCACTGC+TGG | + | chr1_3:57553380-57553399 | None:intergenic | 55.0% | |
| GTCCTTGCCATGCAGTATCC+CGG | - | chr1_3:57554837-57554856 | Msa0127920:CDS | 55.0% | |
| TCCTTGCCATGCAGTATCCC+GGG | - | chr1_3:57554838-57554857 | Msa0127920:CDS | 55.0% | |
| ACATAGCCCGGGATACTGCA+TGG | + | chr1_3:57554847-57554866 | None:intergenic | 55.0% | |
| CCCGGGCTATGTTAATTGCC+AGG | - | chr1_3:57554855-57554874 | Msa0127920:CDS | 55.0% | |
| GTCGACCACACCTGAACAAG+TGG | + | chr1_3:57554911-57554930 | None:intergenic | 55.0% | |
| ! | TTTTGTGCTGGGGGAACAGG+TGG | + | chr1_3:57555987-57556006 | None:intergenic | 55.0% |
| CCTTTCCCCTAGGAACAGGA+GGG | + | chr1_3:57556523-57556542 | None:intergenic | 55.0% | |
| CCTCCTGTTCCTAGGGGAAA+GGG | - | chr1_3:57556521-57556540 | Msa0127920:intron | 55.0% | |
| CTCCTGTTCCTAGGGGAAAG+GGG | - | chr1_3:57556522-57556541 | Msa0127920:intron | 55.0% | |
| GGAAAGGGGCCATGGTAATC+CGG | - | chr1_3:57556536-57556555 | Msa0127920:intron | 55.0% | |
| GTAATCCGGACTTAGCTGGG+AGG | - | chr1_3:57556550-57556569 | Msa0127920:intron | 55.0% | |
| GGCCAAGGATTGTTCCAGTC+AGG | - | chr1_3:57556585-57556604 | Msa0127920:CDS | 55.0% | |
| ACCCGAGTTCGATTCCTGAC+TGG | + | chr1_3:57556602-57556621 | None:intergenic | 55.0% | |
| CGGGTCACACTGCGAAACAA+CGG | - | chr1_3:57557643-57557662 | Msa0127920:intron | 55.0% | |
| GGGTCACACTGCGAAACAAC+GGG | - | chr1_3:57557644-57557663 | Msa0127920:intron | 55.0% | |
| TTTGCATCGAGGCGGAGATC+AGG | - | chr1_3:57557823-57557842 | Msa0127920:intron | 55.0% | |
| CTGTTAGGTGGCAACCGGAA+TGG | - | chr1_3:57558355-57558374 | Msa0127920:intron | 55.0% | |
| ATACCAGCCACCAGGTGCTA+GGG | - | chr1_3:57558602-57558621 | Msa0127920:five_prime_UTR | 55.0% | |
| ACGGGGTTGGGTAGCACAAC+TGG | - | chr1_3:57551365-57551384 | Msa0127920:intron | 60.0% | |
| ACTAAGTGGGGTCGGCTGCA+TGG | + | chr1_3:57552219-57552238 | None:intergenic | 60.0% | |
| ATGCAGCCGACCCCACTTAG+TGG | - | chr1_3:57552218-57552237 | Msa0127920:intron | 60.0% | |
| TGCAGCCGACCCCACTTAGT+GGG | - | chr1_3:57552219-57552238 | Msa0127920:intron | 60.0% | |
| GGTTGCCCGAGAGTCTGAGT+TGG | - | chr1_3:57555735-57555754 | Msa0127920:intron | 60.0% | |
| GTTACAGAGAGGGCCAACCC+CGG | - | chr1_3:57555784-57555803 | Msa0127920:CDS | 60.0% | |
| GGAACAGGTGGAGATGGGGA+AGG | + | chr1_3:57555975-57555994 | None:intergenic | 60.0% | |
| TGGGGGAACAGGTGGAGATG+GGG | + | chr1_3:57555979-57555998 | None:intergenic | 60.0% | |
| CTGGGGGAACAGGTGGAGAT+GGG | + | chr1_3:57555980-57555999 | None:intergenic | 60.0% | |
| CCCTCCTGTTCCTAGGGGAA+AGG | - | chr1_3:57556520-57556539 | Msa0127920:intron | 60.0% | |
| CCCTTTCCCCTAGGAACAGG+AGG | + | chr1_3:57556524-57556543 | None:intergenic | 60.0% | |
| TTCCTAGGGGAAAGGGGCCA+TGG | - | chr1_3:57556528-57556547 | Msa0127920:intron | 60.0% | |
| TACCATGGCCCCTTTCCCCT+AGG | + | chr1_3:57556533-57556552 | None:intergenic | 60.0% | |
| TGCCGACAGCGTTTGCATCG+AGG | - | chr1_3:57557812-57557831 | Msa0127920:intron | 60.0% | |
| CGCCTCGATGCAAACGCTGT+CGG | + | chr1_3:57557817-57557836 | None:intergenic | 60.0% | |
| CGACAGCGTTTGCATCGAGG+CGG | - | chr1_3:57557815-57557834 | Msa0127920:intron | 60.0% | |
| GATACCAGCCACCAGGTGCT+AGG | - | chr1_3:57558601-57558620 | Msa0127920:five_prime_UTR | 60.0% | |
| ! | CTTGGTTGGTCCCTAGCACC+TGG | + | chr1_3:57558615-57558634 | None:intergenic | 60.0% |
| GCCCGGGATACTGCATGGCA+AGG | + | chr1_3:57554842-57554861 | None:intergenic | 65.0% | |
| GCTGGGGGAACAGGTGGAGA+TGG | + | chr1_3:57555981-57556000 | None:intergenic | 65.0% | |
| GGCCCCTTTCCCCTAGGAAC+AGG | + | chr1_3:57556527-57556546 | None:intergenic | 65.0% | |
| ! | GGTTGGTCCCTAGCACCTGG+TGG | + | chr1_3:57558612-57558631 | None:intergenic | 65.0% |
| GGTCCCTAGCACCTGGTGGC+TGG | + | chr1_3:57558608-57558627 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 57550692 | 57558788 | 57550692 | ID=Msa0127920;Name=Msa0127920 |
| chr1_3 | mRNA | 57550692 | 57558788 | 57550692 | ID=Msa0127920-mRNA-1;Parent=Msa0127920;Name=Msa0127920-mRNA-1;_AED=0.26;_eAED=0.26;_QI=330|0.68|0.88|0.88|1|1|17|317|482 |
| chr1_3 | exon | 57550692 | 57551118 | 57550692 | ID=Msa0127920-mRNA-1:exon:18318;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57551599 | 57551659 | 57551599 | ID=Msa0127920-mRNA-1:exon:18317;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57551804 | 57551875 | 57551804 | ID=Msa0127920-mRNA-1:exon:18316;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57551994 | 57552089 | 57551994 | ID=Msa0127920-mRNA-1:exon:18315;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57552123 | 57552206 | 57552123 | ID=Msa0127920-mRNA-1:exon:18314;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57553152 | 57553262 | 57553152 | ID=Msa0127920-mRNA-1:exon:18313;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57553577 | 57553744 | 57553577 | ID=Msa0127920-mRNA-1:exon:18312;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57553877 | 57553939 | 57553877 | ID=Msa0127920-mRNA-1:exon:18311;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57554152 | 57554199 | 57554152 | ID=Msa0127920-mRNA-1:exon:18310;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57554314 | 57554406 | 57554314 | ID=Msa0127920-mRNA-1:exon:18309;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57554561 | 57554628 | 57554561 | ID=Msa0127920-mRNA-1:exon:18308;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57554757 | 57554886 | 57554757 | ID=Msa0127920-mRNA-1:exon:18307;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57555594 | 57555650 | 57555594 | ID=Msa0127920-mRNA-1:exon:18306;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57555769 | 57555831 | 57555769 | ID=Msa0127920-mRNA-1:exon:18305;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57556561 | 57556626 | 57556561 | ID=Msa0127920-mRNA-1:exon:18304;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57558205 | 57558291 | 57558205 | ID=Msa0127920-mRNA-1:exon:18303;Parent=Msa0127920-mRNA-1 |
| chr1_3 | exon | 57558387 | 57558788 | 57558387 | ID=Msa0127920-mRNA-1:exon:18302;Parent=Msa0127920-mRNA-1 |
| chr1_3 | five_prime_UTR | 57558459 | 57558788 | 57558459 | ID=Msa0127920-mRNA-1:five_prime_utr;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57558387 | 57558458 | 57558387 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57558205 | 57558291 | 57558205 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57556561 | 57556626 | 57556561 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57555769 | 57555831 | 57555769 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57555594 | 57555650 | 57555594 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57554757 | 57554886 | 57554757 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57554561 | 57554628 | 57554561 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57554314 | 57554406 | 57554314 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57554152 | 57554199 | 57554152 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57553877 | 57553939 | 57553877 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57553577 | 57553744 | 57553577 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57553152 | 57553262 | 57553152 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57552123 | 57552206 | 57552123 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57551994 | 57552089 | 57551994 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57551804 | 57551875 | 57551804 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57551599 | 57551659 | 57551599 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | CDS | 57551009 | 57551118 | 57551009 | ID=Msa0127920-mRNA-1:cds;Parent=Msa0127920-mRNA-1 |
| chr1_3 | three_prime_UTR | 57550692 | 57551008 | 57550692 | ID=Msa0127920-mRNA-1:three_prime_utr;Parent=Msa0127920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
