AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0128190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128190 MtrunA17_Chr1g0194741 96.285 646 21 2 1 643 7 652 0.0 1270
Msa0128190 MtrunA17_Chr1g0197591 61.887 1102 346 20 4 1090 3 1045 0.0 1228
Msa0128190 MtrunA17_Chr1g0194731 95.415 458 19 2 643 1099 1 457 0.0 834
Msa0128190 MtrunA17_Chr8g0371601 28.772 570 352 17 123 668 196 735 1.65e-42 169
Msa0128190 MtrunA17_Chr8g0371601 31.658 199 111 7 906 1081 957 1153 1.28e-16 85.5
Msa0128190 MtrunA17_Chr5g0405701 33.690 374 228 9 297 668 418 773 7.53e-42 167
Msa0128190 MtrunA17_Chr5g0405701 34.483 145 71 4 960 1081 1040 1183 3.51e-16 84.3
Msa0128190 MtrunA17_Chr8g0343551 73.239 71 19 0 1020 1090 12 82 2.17e-31 118
Msa0128190 MtrunA17_Chr8g0377481 28.079 406 223 12 377 764 381 735 2.36e-30 130
Msa0128190 MtrunA17_Chr8g0377481 32.609 138 69 6 967 1091 838 964 1.25e-13 75.9
Msa0128190 MtrunA17_Chr3g0122391 28.251 446 254 17 266 672 305 723 1.03e-29 127
Msa0128190 MtrunA17_Chr3g0122391 32.716 162 83 8 942 1091 874 1021 3.01e-14 77.8
Msa0128190 MtrunA17_Chr5g0447641 26.111 360 214 11 345 679 576 908 3.08e-23 107
Msa0128190 MtrunA17_Chr5g0447641 33.333 150 62 7 970 1093 1074 1211 1.68e-12 72.0
Msa0128190 MtrunA17_Chr8g0392301 26.075 372 221 9 345 678 340 695 3.13e-22 103
Msa0128190 MtrunA17_Chr8g0392301 32.727 165 86 5 944 1091 835 991 6.78e-15 79.7
Msa0128190 MtrunA17_Chr3g0136601 29.464 336 180 14 361 663 335 646 7.39e-20 95.9
Msa0128190 MtrunA17_Chr4g0013831 27.273 352 192 11 372 702 324 632 2.87e-18 90.5
Msa0128190 MtrunA17_Chr1g0150511 26.027 365 203 12 393 707 381 728 5.67e-18 89.7
Msa0128190 MtrunA17_Chr7g0269631 28.448 232 126 7 448 672 393 591 6.75e-16 82.8
Msa0128190 MtrunA17_Chr8g0364781 36.496 137 61 6 973 1096 15 138 4.90e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0128190 AT2G47430.1 38.153 1148 613 25 5 1095 12 1119 0.0 680
Msa0128190 AT2G17820.1 33.858 381 232 9 290 668 400 762 4.15e-44 175
Msa0128190 AT2G17820.1 31.658 199 97 7 921 1090 1004 1192 3.37e-16 84.7
Msa0128190 AT1G27320.1 26.316 532 297 19 266 763 315 785 1.25e-30 131
Msa0128190 AT1G27320.1 29.221 154 75 5 967 1096 887 1030 1.19e-11 69.7
Msa0128190 AT2G01830.2 27.869 366 220 11 332 671 415 762 2.10e-28 124
Msa0128190 AT2G01830.2 37.037 135 67 4 967 1091 942 1068 7.01e-16 83.6
Msa0128190 AT2G01830.5 27.869 366 220 11 332 671 404 751 2.60e-28 124
Msa0128190 AT2G01830.5 37.500 136 65 5 967 1091 931 1057 7.85e-16 83.6
Msa0128190 AT2G01830.1 27.869 366 220 11 332 671 392 739 2.80e-28 124
Msa0128190 AT2G01830.1 37.037 135 67 4 967 1091 919 1045 7.94e-16 83.6
Msa0128190 AT2G01830.4 27.869 366 220 11 332 671 392 739 2.80e-28 124
Msa0128190 AT2G01830.4 37.037 135 67 4 967 1091 919 1045 7.94e-16 83.6
Msa0128190 AT2G01830.6 27.869 366 220 11 332 671 392 739 2.80e-28 124
Msa0128190 AT2G01830.6 37.037 135 67 4 967 1091 919 1045 7.94e-16 83.6
Msa0128190 AT2G01830.3 27.869 366 220 11 332 671 392 739 2.80e-28 124
Msa0128190 AT2G01830.3 37.037 135 67 4 967 1091 919 1045 7.94e-16 83.6
Msa0128190 AT5G35750.1 29.217 332 172 12 374 674 573 872 4.55e-25 113
Msa0128190 AT5G35750.1 31.544 149 68 5 967 1091 1032 1170 9.87e-12 70.1
Msa0128190 AT1G66340.1 27.532 316 178 9 372 680 323 594 4.09e-19 93.6
Msa0128190 AT5G10720.1 30.037 273 154 11 393 663 371 608 3.57e-18 90.9
Msa0128190 AT2G40940.1 25.538 325 185 9 358 670 309 588 2.36e-15 81.3

Find 201 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1_3:-57854961 Msa0128190:CDS
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1_3:-57858232 Msa0128190:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1_3:+57859633 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1_3:+57860158 None:intergenic
TGTGATCTAGGTTCATTTCT+TGG 0.224149 1_3:+57855293 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1_3:-57859607 Msa0128190:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1_3:-57858185 Msa0128190:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1_3:-57859331 Msa0128190:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1_3:-57859391 Msa0128190:CDS
TTGCTACCCCATTGATATAA+TGG 0.245070 1_3:-57859212 Msa0128190:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1_3:-57859422 Msa0128190:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1_3:+57858159 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1_3:+57857445 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1_3:-57859572 Msa0128190:CDS
CACAGGTTGGATATAGTATA+TGG 0.279878 1_3:+57859687 None:intergenic
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1_3:+57858276 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1_3:-57858241 Msa0128190:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1_3:+57858195 None:intergenic
ACAAAAGTCCTATGTTAATC+TGG 0.291733 1_3:-57855213 Msa0128190:CDS
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1_3:+57855134 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1_3:+57854672 None:intergenic
TTCCTGAGTTCGGTGGTAAT+TGG 0.302430 1_3:-57855334 Msa0128190:CDS
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1_3:-57858155 Msa0128190:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1_3:-57858487 Msa0128190:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1_3:-57860550 Msa0128190:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1_3:+57858101 None:intergenic
TTGGAAGGTACTTGTGATCT+AGG 0.351381 1_3:+57855281 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1_3:-57857670 Msa0128190:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1_3:+57860159 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1_3:-57859325 Msa0128190:CDS
TTCTATTCCCATTATATCAA+TGG 0.357816 1_3:+57859204 None:intergenic
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1_3:-57855361 Msa0128190:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1_3:+57855461 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1_3:-57855386 Msa0128190:CDS
TGCTACCCCATTGATATAAT+GGG 0.365131 1_3:-57859211 Msa0128190:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1_3:-57857506 Msa0128190:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1_3:-57855941 Msa0128190:CDS
TCTATTCCCATTATATCAAT+GGG 0.382599 1_3:+57859205 None:intergenic
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1_3:+57854677 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1_3:+57857796 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1_3:-57856007 Msa0128190:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1_3:-57859571 Msa0128190:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1_3:-57857478 Msa0128190:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1_3:-57855466 Msa0128190:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1_3:+57855262 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1_3:-57857379 Msa0128190:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1_3:+57855896 None:intergenic
AACACTCTTGTGGTTAGTCT+TGG 0.410012 1_3:+57857600 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1_3:-57855685 Msa0128190:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1_3:+57855515 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1_3:+57855374 None:intergenic
ATTAGGCTTCTTCCTGAGTT+CGG 0.422475 1_3:-57855344 Msa0128190:CDS
ACATTTCAATCAAACCAATA+AGG 0.422617 1_3:+57858218 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1_3:-57855809 Msa0128190:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1_3:+57860205 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1_3:-57859409 Msa0128190:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1_3:-57855068 Msa0128190:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1_3:-57854952 Msa0128190:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1_3:+57857506 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1_3:-57855808 Msa0128190:CDS
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1_3:-57855462 Msa0128190:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1_3:+57858148 None:intergenic
CATAAGACATGGATCTTGTT+GGG 0.439105 1_3:+57857507 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1_3:-57854717 Msa0128190:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1_3:-57855633 Msa0128190:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1_3:-57855626 Msa0128190:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1_3:-57855699 Msa0128190:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1_3:-57858451 Msa0128190:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1_3:+57856021 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.447417 1_3:-57857782 Msa0128190:CDS
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1_3:-57857391 Msa0128190:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1_3:+57855411 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1_3:-57858134 Msa0128190:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1_3:-57858452 Msa0128190:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1_3:-57855539 Msa0128190:CDS
GACACTCTTGATTGTAATGA+TGG 0.452822 1_3:-57858425 Msa0128190:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1_3:-57855203 Msa0128190:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1_3:-57859312 Msa0128190:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1_3:-57860367 Msa0128190:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1_3:+57854813 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1_3:+57857383 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1_3:-57857378 Msa0128190:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1_3:-57857385 Msa0128190:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1_3:-57857397 Msa0128190:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1_3:-57859493 Msa0128190:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1_3:-57854630 None:intergenic
TGATATAATGGGAATAGAAT+CGG 0.482331 1_3:-57859200 Msa0128190:intron
TTGATCACTGAGCCATTACA+AGG 0.483090 1_3:+57857757 None:intergenic
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1_3:+57855888 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1_3:-57857362 Msa0128190:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1_3:+57854960 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1_3:-57859508 Msa0128190:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1_3:-57855140 Msa0128190:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1_3:-57854814 Msa0128190:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1_3:+57854685 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1_3:+57855434 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1_3:+57858102 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1_3:-57857732 Msa0128190:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1_3:+57859838 None:intergenic
GTTGTATTGGACCCTTGTAA+TGG 0.497519 1_3:-57857769 Msa0128190:CDS
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1_3:-57856082 Msa0128190:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1_3:-57859802 Msa0128190:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1_3:-57857406 Msa0128190:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1_3:+57858245 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1_3:+57855351 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1_3:+57854980 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1_3:-57856112 Msa0128190:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1_3:-57855087 Msa0128190:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1_3:+57859670 None:intergenic
CATCCAATGGCAATGAAGAA+AGG 0.508058 1_3:-57857799 Msa0128190:CDS
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1_3:+57859674 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1_3:-57854821 Msa0128190:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1_3:+57855626 None:intergenic
CAAAAGTCCTATGTTAATCT+GGG 0.514695 1_3:-57855212 Msa0128190:CDS
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1_3:-57856073 Msa0128190:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1_3:+57855554 None:intergenic
CTATCAATATTGATGCAAGT+TGG 0.529019 1_3:-57859615 Msa0128190:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1_3:-57856103 Msa0128190:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1_3:-57854822 Msa0128190:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1_3:-57855795 Msa0128190:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1_3:+57855878 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1_3:-57858109 Msa0128190:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1_3:+57859450 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1_3:+57858303 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1_3:-57859793 Msa0128190:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1_3:-57855995 Msa0128190:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1_3:-57855849 Msa0128190:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1_3:-57859438 Msa0128190:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1_3:-57857477 Msa0128190:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1_3:-57855170 Msa0128190:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1_3:-57859505 Msa0128190:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1_3:-57857889 Msa0128190:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1_3:-57859726 Msa0128190:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1_3:-57855038 Msa0128190:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1_3:-57854777 Msa0128190:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1_3:-57857739 Msa0128190:CDS
TGGAGATCTAATAAGGAATG+AGG 0.562999 1_3:-57859305 Msa0128190:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1_3:-57859797 Msa0128190:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1_3:+57860552 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1_3:-57857669 Msa0128190:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1_3:-57860320 Msa0128190:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1_3:-57857386 Msa0128190:CDS
TCTTGCAAGGAGCAAGCTGT+TGG 0.570849 1_3:-57859274 Msa0128190:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1_3:-57854806 Msa0128190:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1_3:-57859439 Msa0128190:CDS
AGTTGATTTGTATCATCCAA+TGG 0.573037 1_3:-57857812 Msa0128190:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1_3:+57855860 None:intergenic
CACACACTTTCATCATTGGA+AGG 0.574607 1_3:+57855266 None:intergenic
GTGTTATGAAACATTTGTCT+TGG 0.576661 1_3:-57857582 Msa0128190:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1_3:-57855009 Msa0128190:CDS
ATCCAATTACCACCGAACTC+AGG 0.583478 1_3:+57855332 None:intergenic
GCTGACCACTGAGACTGGAA+TGG 0.584171 1_3:-57854712 Msa0128190:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1_3:-57857893 Msa0128190:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1_3:-57855708 Msa0128190:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1_3:-57860330 Msa0128190:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1_3:-57855240 Msa0128190:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1_3:-57856095 Msa0128190:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1_3:-57855188 Msa0128190:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1_3:+57855030 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1_3:+57855089 None:intergenic
AGGCTTCTTCCTGAGTTCGG+TGG 0.599749 1_3:-57855341 Msa0128190:CDS
GGCACATAACAGTTAGAGCA+TGG 0.600016 1_3:-57857648 Msa0128190:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1_3:-57857839 Msa0128190:CDS
TGAGGAAGCTGTATCTTGCA+AGG 0.603521 1_3:-57859287 Msa0128190:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1_3:+57855879 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1_3:+57855866 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1_3:-57854790 Msa0128190:CDS
GAAGTGGATGATACAGGGAA+AGG 0.611039 1_3:-57857472 Msa0128190:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1_3:-57855244 Msa0128190:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1_3:-57859727 Msa0128190:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1_3:+57855689 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1_3:-57859673 Msa0128190:CDS
AATGTTTCATAACACTCTTG+TGG 0.617188 1_3:+57857590 None:intergenic
AACTACATCCTCAAGGAGAG+AGG 0.617424 1_3:+57857831 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1_3:-57856089 Msa0128190:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1_3:-57854997 Msa0128190:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1_3:-57854805 Msa0128190:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1_3:-57859725 Msa0128190:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1_3:+57860332 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1_3:-57855239 Msa0128190:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1_3:-57859504 Msa0128190:CDS
ACAAATCAACTACATCCTCA+AGG 0.638204 1_3:+57857824 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1_3:+57857496 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1_3:-57855008 Msa0128190:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1_3:-57859724 Msa0128190:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1_3:+57860138 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1_3:-57855030 Msa0128190:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1_3:+57855877 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1_3:-57855255 Msa0128190:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1_3:-57859668 Msa0128190:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1_3:+57860327 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1_3:+57854963 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1_3:-57854826 Msa0128190:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1_3:+57859808 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1_3:+57854707 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1_3:-57859503 Msa0128190:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1_3:-57855889 Msa0128190:CDS
TGATCACTGAGCCATTACAA+GGG 0.704208 1_3:+57857758 None:intergenic
CTTCTCTGATGTTCACACCA+AGG 0.706528 1_3:-57860137 Msa0128190:intron
CTATTCCCATTATATCAATG+GGG 0.724239 1_3:+57859206 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1_3:+57860316 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTAGTAAAATTATTTTTT+GGG + chr1_3:57856165-57856184 None:intergenic 10.0%
!!! AAAGTAGTAAAATTATTTTT+TGG + chr1_3:57856166-57856185 None:intergenic 10.0%
!!! GTATTTGAATTTTTTTTTTA+TGG + chr1_3:57856359-57856378 None:intergenic 10.0%
!!! AAAATATTTATGGTTTTGAA+GGG + chr1_3:57855111-57855130 None:intergenic 15.0%
!! ATAAGCAAACAAAATATTTA+TGG + chr1_3:57855121-57855140 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + chr1_3:57856456-57856475 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + chr1_3:57856457-57856476 None:intergenic 15.0%
!!! AACTAATTTTATTAAATGTC+AGG - chr1_3:57856684-57856703 Msa0128190:intron 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG - chr1_3:57857268-57857287 Msa0128190:intron 15.0%
!!! TGATTTTTTTACAACTAAAA+GGG + chr1_3:57859042-57859061 None:intergenic 15.0%
!!! ATGATTTTTTTACAACTAAA+AGG + chr1_3:57859043-57859062 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG - chr1_3:57859060-57859079 Msa0128190:intron 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + chr1_3:57859244-57859263 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - chr1_3:57860324-57860343 Msa0128190:CDS 15.0%
!!! TTGATTTGTAACAAAGATTA+AGG - chr1_3:57854741-57854760 Msa0128190:CDS 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - chr1_3:57854825-57854844 Msa0128190:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + chr1_3:57855112-57855131 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG - chr1_3:57855309-57855328 Msa0128190:CDS 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - chr1_3:57855333-57855352 Msa0128190:CDS 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + chr1_3:57855364-57855383 None:intergenic 20.0%
!! TATCGTTAAAAATCATCAAA+CGG + chr1_3:57855846-57855865 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG + chr1_3:57856089-57856108 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + chr1_3:57856139-57856158 None:intergenic 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + chr1_3:57856342-57856361 None:intergenic 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + chr1_3:57856543-57856562 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + chr1_3:57857007-57857026 None:intergenic 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - chr1_3:57857014-57857033 Msa0128190:intron 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + chr1_3:57857073-57857092 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + chr1_3:57857207-57857226 None:intergenic 20.0%
!! AAATGTTTGATATATAAGAG+AGG + chr1_3:57858132-57858151 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - chr1_3:57858767-57858786 Msa0128190:intron 20.0%
!! AGTTCATATATGATATAGAA+AGG - chr1_3:57858859-57858878 Msa0128190:intron 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + chr1_3:57858998-57859017 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + chr1_3:57859245-57859264 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - chr1_3:57859462-57859481 Msa0128190:CDS 20.0%
!! ATGATAATCAAAACAAAACT+TGG + chr1_3:57859648-57859667 None:intergenic 20.0%
!! ATTAAGATATAATCATAAGG+AGG + chr1_3:57860239-57860258 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - chr1_3:57860238-57860257 Msa0128190:CDS 20.0%
!! TCCATTAAGATATAATCATA+AGG + chr1_3:57860242-57860261 None:intergenic 20.0%
!!! TTTGTTGATGATGATTTCAT+TGG + chr1_3:57854997-57855016 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + chr1_3:57855092-57855111 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + chr1_3:57855093-57855112 None:intergenic 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + chr1_3:57855569-57855588 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + chr1_3:57855806-57855825 None:intergenic 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - chr1_3:57855808-57855827 Msa0128190:CDS 25.0%
! TCTATTCCCATTATATCAAT+GGG + chr1_3:57855997-57856016 None:intergenic 25.0%
! TTCTATTCCCATTATATCAA+TGG + chr1_3:57855998-57856017 None:intergenic 25.0%
!! TGATATAATGGGAATAGAAT+CGG - chr1_3:57855999-57856018 Msa0128190:CDS 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + chr1_3:57856138-57856157 None:intergenic 25.0%
! ATGACATTTGTGAACATATT+TGG + chr1_3:57856621-57856640 None:intergenic 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - chr1_3:57856747-57856766 Msa0128190:intron 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - chr1_3:57856748-57856767 Msa0128190:intron 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - chr1_3:57856820-57856839 Msa0128190:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + chr1_3:57856984-57857003 None:intergenic 25.0%
! TACAAAATATTGTTAACGAG+CGG - chr1_3:57857222-57857241 Msa0128190:intron 25.0%
! CTGTTAAATTTACTGATGAA+GGG - chr1_3:57857530-57857549 Msa0128190:CDS 25.0%
! AATACAAAATCCATAAGACA+TGG + chr1_3:57857706-57857725 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - chr1_3:57857711-57857730 Msa0128190:CDS 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - chr1_3:57857918-57857937 Msa0128190:intron 25.0%
! TGTTTCATTAGAATGAATCA+AGG + chr1_3:57858737-57858756 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG + chr1_3:57859039-57859058 None:intergenic 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG - chr1_3:57859071-57859090 Msa0128190:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + chr1_3:57859239-57859258 None:intergenic 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - chr1_3:57859461-57859480 Msa0128190:CDS 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + chr1_3:57859687-57859706 None:intergenic 25.0%
! AAAAACTTCTTTCCACTTAA+TGG + chr1_3:57860074-57860093 None:intergenic 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG - chr1_3:57860073-57860092 Msa0128190:intron 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - chr1_3:57860247-57860266 Msa0128190:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - chr1_3:57860356-57860375 Msa0128190:intron 25.0%
GGTGACATTAGTAGAATTAA+GGG + chr1_3:57855043-57855062 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG + chr1_3:57855044-57855063 None:intergenic 30.0%
!!! TATTTTTTTTCTTTTCGCGC+TGG + chr1_3:57855294-57855313 None:intergenic 30.0%
ATTTATTTGCACTTTGTAGG+TGG - chr1_3:57855336-57855355 Msa0128190:CDS 30.0%
TTGACACAAATCTCATACAT+AGG - chr1_3:57855397-57855416 Msa0128190:CDS 30.0%
ACAAATCTCATACATAGGAA+TGG - chr1_3:57855402-57855421 Msa0128190:CDS 30.0%
! TTTTTCACACACTACAATGA+TGG - chr1_3:57855433-57855452 Msa0128190:CDS 30.0%
CTATCAATATTGATGCAAGT+TGG - chr1_3:57855584-57855603 Msa0128190:CDS 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - chr1_3:57855592-57855611 Msa0128190:CDS 30.0%
TTCACATGAATTTGCATCAT+TGG - chr1_3:57855627-57855646 Msa0128190:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - chr1_3:57855628-57855647 Msa0128190:CDS 30.0%
TCAAGGGACAAAATCATATT+TGG - chr1_3:57855777-57855796 Msa0128190:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - chr1_3:57855868-57855887 Msa0128190:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - chr1_3:57855874-57855893 Msa0128190:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - chr1_3:57855887-57855906 Msa0128190:CDS 30.0%
CTATTCCCATTATATCAATG+GGG + chr1_3:57855996-57856015 None:intergenic 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + chr1_3:57856125-57856144 None:intergenic 30.0%
! TTTGGGTACAAAGTACTATT+TGG + chr1_3:57856148-57856167 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - chr1_3:57856233-57856252 Msa0128190:intron 30.0%
! AATCCCTTTTCTTTATGACT+TGG + chr1_3:57856754-57856773 None:intergenic 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + chr1_3:57857043-57857062 None:intergenic 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - chr1_3:57857044-57857063 Msa0128190:intron 30.0%
TGATTTACCTAGCAAATCTT+GGG + chr1_3:57857100-57857119 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + chr1_3:57857101-57857120 None:intergenic 30.0%
TTTGCTAGGTAAATCATCAT+AGG - chr1_3:57857104-57857123 Msa0128190:intron 30.0%
TGCTACCAATGTTGTTAAAT+AGG - chr1_3:57857131-57857150 Msa0128190:intron 30.0%
GCTACCAATGTTGTTAAATA+GGG - chr1_3:57857132-57857151 Msa0128190:intron 30.0%
!! AGTTGATTTGTATCATCCAA+TGG - chr1_3:57857387-57857406 Msa0128190:CDS 30.0%
GCTGTTAAATTTACTGATGA+AGG - chr1_3:57857529-57857548 Msa0128190:CDS 30.0%
! AGTCTTGGATTTTTGCAATT+TGG + chr1_3:57857587-57857606 None:intergenic 30.0%
AATGTTTCATAACACTCTTG+TGG + chr1_3:57857612-57857631 None:intergenic 30.0%
GTGTTATGAAACATTTGTCT+TGG - chr1_3:57857617-57857636 Msa0128190:CDS 30.0%
! TATTTGAAGTGGATGATACA+GGG - chr1_3:57857722-57857741 Msa0128190:CDS 30.0%
CAAGTTAAAGAGAATTCTGT+TGG - chr1_3:57857793-57857812 Msa0128190:CDS 30.0%
GACTCTTATCGTCTATAAAT+AGG + chr1_3:57858157-57858176 None:intergenic 30.0%
! CACACATTTTACCCATTTAT+AGG - chr1_3:57858186-57858205 Msa0128190:CDS 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + chr1_3:57858277-57858296 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + chr1_3:57858413-57858432 None:intergenic 30.0%
CCTATGAATAGGTAAAATGT+TGG + chr1_3:57858615-57858634 None:intergenic 30.0%
! CCAACATTTTACCTATTCAT+AGG - chr1_3:57858612-57858631 Msa0128190:intron 30.0%
AGAGTCATATTGTTTGTGTT+GGG + chr1_3:57858669-57858688 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG + chr1_3:57858670-57858689 None:intergenic 30.0%
AAAGACAAAAGAGAAGTGAT+TGG + chr1_3:57858807-57858826 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + chr1_3:57859342-57859361 None:intergenic 30.0%
CATTCTTTACATTACTGATG+AGG - chr1_3:57859350-57859369 Msa0128190:CDS 30.0%
ATTATCATTGATGCAAATGC+AGG - chr1_3:57859660-57859679 Msa0128190:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - chr1_3:57859733-57859752 Msa0128190:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + chr1_3:57859768-57859787 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG + chr1_3:57859791-57859810 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - chr1_3:57859813-57859832 Msa0128190:CDS 30.0%
AACAATCTACTACCATGAAA+TGG + chr1_3:57859828-57859847 None:intergenic 30.0%
ACAAAAGTCCTATGTTAATC+TGG - chr1_3:57859986-57860005 Msa0128190:intron 30.0%
CAAAAGTCCTATGTTAATCT+GGG - chr1_3:57859987-57860006 Msa0128190:intron 30.0%
! TTTTCTTCCCAGATTAACAT+AGG + chr1_3:57859997-57860016 None:intergenic 30.0%
TATGTTAATCTGGGAAGAAA+AGG - chr1_3:57859996-57860015 Msa0128190:intron 30.0%
TTCTTTCCACTTAATGGTTT+AGG + chr1_3:57860068-57860087 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + chr1_3:57860113-57860132 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - chr1_3:57860112-57860131 Msa0128190:intron 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + chr1_3:57860530-57860549 None:intergenic 30.0%
AGCAAGATCATGAAAGATGA+AGG + chr1_3:57854650-57854669 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - chr1_3:57854649-57854668 Msa0128190:CDS 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG + chr1_3:57854718-57854737 None:intergenic 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - chr1_3:57854832-57854851 Msa0128190:intron 35.0%
TACAAGAAATGGGTATACCT+TGG + chr1_3:57855082-57855101 None:intergenic 35.0%
! TTTTTATTACCGAACTGTCG+TGG - chr1_3:57855169-57855188 Msa0128190:CDS 35.0%
AATGTACTCTAGATTTGCGA+AGG - chr1_3:57855253-57855272 Msa0128190:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + chr1_3:57855394-57855413 None:intergenic 35.0%
ATCTCATACATAGGAATGGA+AGG - chr1_3:57855406-57855425 Msa0128190:CDS 35.0%
ATGTACTCTAACTCATCTAG+TGG - chr1_3:57855472-57855491 Msa0128190:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - chr1_3:57855473-57855492 Msa0128190:CDS 35.0%
! CACAGGTTGGATATAGTATA+TGG + chr1_3:57855515-57855534 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - chr1_3:57855539-57855558 Msa0128190:CDS 35.0%
TCAGCTAGAATCAACAGAAT+AGG - chr1_3:57855691-57855710 Msa0128190:CDS 35.0%
CTAGAATCAACAGAATAGGA+GGG - chr1_3:57855695-57855714 Msa0128190:CDS 35.0%
TAGAATCAACAGAATAGGAG+GGG - chr1_3:57855696-57855715 Msa0128190:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG + chr1_3:57855752-57855771 None:intergenic 35.0%
TCATATTTGGCTACCAAAGA+TGG - chr1_3:57855790-57855809 Msa0128190:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG - chr1_3:57855894-57855913 Msa0128190:CDS 35.0%
TTGCTACCCCATTGATATAA+TGG - chr1_3:57855987-57856006 Msa0128190:CDS 35.0%
TGCTACCCCATTGATATAAT+GGG - chr1_3:57855988-57856007 Msa0128190:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - chr1_3:57856429-57856448 Msa0128190:intron 35.0%
! AGATGAGAGATCCATTTTGT+GGG + chr1_3:57856726-57856745 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + chr1_3:57856727-57856746 None:intergenic 35.0%
GACACTCTTGATTGTAATGA+TGG - chr1_3:57856774-57856793 Msa0128190:intron 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + chr1_3:57856926-57856945 None:intergenic 35.0%
GGAGACCAACTTAAAACAAA+TGG - chr1_3:57857065-57857084 Msa0128190:intron 35.0%
TGTGCCCTATTTAACAACAT+TGG + chr1_3:57857139-57857158 None:intergenic 35.0%
AAAAATGCAACTAGAGGAAG+AGG - chr1_3:57857333-57857352 Msa0128190:intron 35.0%
ACAAATCAACTACATCCTCA+AGG + chr1_3:57857378-57857397 None:intergenic 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - chr1_3:57857417-57857436 Msa0128190:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - chr1_3:57857460-57857479 Msa0128190:CDS 35.0%
CATAAGACATGGATCTTGTT+GGG + chr1_3:57857695-57857714 None:intergenic 35.0%
! GTATTTGAAGTGGATGATAC+AGG - chr1_3:57857721-57857740 Msa0128190:CDS 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + chr1_3:57857757-57857776 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG - chr1_3:57857991-57858010 Msa0128190:intron 35.0%
AAATGGGTAAAATGTGTGAG+TGG + chr1_3:57858184-57858203 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG + chr1_3:57858227-57858246 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + chr1_3:57858274-57858293 None:intergenic 35.0%
TTGGATTAAGTATAGGAGGT+GGG + chr1_3:57858406-57858425 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG + chr1_3:57858407-57858426 None:intergenic 35.0%
GTGTTTGGATTAAGTATAGG+AGG + chr1_3:57858410-57858429 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + chr1_3:57858568-57858587 None:intergenic 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + chr1_3:57858569-57858588 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG - chr1_3:57858571-57858590 Msa0128190:intron 35.0%
! CCTTAAGGCATTAGGTATAT+GGG - chr1_3:57858572-57858591 Msa0128190:intron 35.0%
AAATGTTGGAAACGTAAGAG+AGG + chr1_3:57858601-57858620 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG - chr1_3:57859192-57859211 Msa0128190:intron 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - chr1_3:57859391-57859410 Msa0128190:CDS 35.0%
TATCAGTGATCAAAGTTCAC+CGG - chr1_3:57859491-57859510 Msa0128190:CDS 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - chr1_3:57859566-57859585 Msa0128190:CDS 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - chr1_3:57859737-57859756 Msa0128190:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + chr1_3:57859741-57859760 None:intergenic 35.0%
GTAGATTGTTCCAAGTCATT+AGG - chr1_3:57859838-57859857 Msa0128190:CDS 35.0%
TGTGATCTAGGTTCATTTCT+TGG + chr1_3:57859909-57859928 None:intergenic 35.0%
TAGACACACACTTTCATCAT+TGG + chr1_3:57859940-57859959 None:intergenic 35.0%
AGAAAAGGTTCTGTTCATCA+AGG - chr1_3:57860011-57860030 Msa0128190:intron 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - chr1_3:57860029-57860048 Msa0128190:intron 35.0%
AGCAATCCTAAACCATTAAG+TGG - chr1_3:57860059-57860078 Msa0128190:intron 35.0%
ACTATTGACCAATGTGAGAA+TGG - chr1_3:57860161-57860180 Msa0128190:CDS 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + chr1_3:57860222-57860241 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + chr1_3:57860517-57860536 None:intergenic 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + chr1_3:57860525-57860544 None:intergenic 35.0%
! ATACCAACATGGTGTCAATG+AGG + chr1_3:57854875-57854894 None:intergenic 40.0%
!! CGCGAAGGAAATTCACTTTT+TGG - chr1_3:57855216-57855235 Msa0128190:CDS 40.0%
GTACTCTAACTCATCTAGTG+GGG - chr1_3:57855474-57855493 Msa0128190:CDS 40.0%
TACTCTAACTCATCTAGTGG+GGG - chr1_3:57855475-57855494 Msa0128190:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + chr1_3:57855540-57855559 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - chr1_3:57855538-57855557 Msa0128190:CDS 40.0%
! TGACACTGGAATGGTTTTTG+GGG - chr1_3:57855540-57855559 Msa0128190:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - chr1_3:57855694-57855713 Msa0128190:CDS 40.0%
CAAGATAAGCACGAAGATCA+TGG + chr1_3:57856957-57856976 None:intergenic 40.0%
TTGGTCTCCAATTCTGAACT+TGG + chr1_3:57857054-57857073 None:intergenic 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - chr1_3:57857090-57857109 Msa0128190:intron 40.0%
TTGTTAACGAGCGGCTATAA+TGG - chr1_3:57857231-57857250 Msa0128190:intron 40.0%
ACTTGACACAAGCAAGATTG+AGG - chr1_3:57857306-57857325 Msa0128190:intron 40.0%
TGATTTATCCTCTCTCCTTG+AGG - chr1_3:57857360-57857379 Msa0128190:intron 40.0%
CATCCAATGGCAATGAAGAA+AGG - chr1_3:57857400-57857419 Msa0128190:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG + chr1_3:57857406-57857425 None:intergenic 40.0%
GTTGTATTGGACCCTTGTAA+TGG - chr1_3:57857430-57857449 Msa0128190:CDS 40.0%
TGATCACTGAGCCATTACAA+GGG + chr1_3:57857444-57857463 None:intergenic 40.0%
TTGATCACTGAGCCATTACA+AGG + chr1_3:57857445-57857464 None:intergenic 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - chr1_3:57857467-57857486 Msa0128190:CDS 40.0%
!! AACACTCTTGTGGTTAGTCT+TGG + chr1_3:57857602-57857621 None:intergenic 40.0%
CCATAAGACATGGATCTTGT+TGG + chr1_3:57857696-57857715 None:intergenic 40.0%
CCAACAAGATCCATGTCTTA+TGG - chr1_3:57857693-57857712 Msa0128190:CDS 40.0%
GTCTCACGTCACCTATAAAT+GGG + chr1_3:57858200-57858219 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG + chr1_3:57858201-57858220 None:intergenic 40.0%
AGGGAGAATCTTGGGTTTAT+GGG + chr1_3:57858373-57858392 None:intergenic 40.0%
AACAAGTGGTATTAGTGCCT+TGG + chr1_3:57858467-57858486 None:intergenic 40.0%
! AAGGCACTAATACCACTTGT+TGG - chr1_3:57858466-57858485 Msa0128190:CDS 40.0%
AGGCACTAATACCACTTGTT+GGG - chr1_3:57858467-57858486 Msa0128190:CDS 40.0%
CTCTTGTGGTTATGGAACAT+TGG + chr1_3:57858525-57858544 None:intergenic 40.0%
GTCTATGTCTCTTGTGGTTA+TGG + chr1_3:57858533-57858552 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + chr1_3:57858565-57858584 None:intergenic 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - chr1_3:57858564-57858583 Msa0128190:intron 40.0%
CCCATATACCTAATGCCTTA+AGG + chr1_3:57858575-57858594 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG + chr1_3:57858626-57858645 None:intergenic 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG + chr1_3:57858658-57858677 None:intergenic 40.0%
TTCTAGGTACGTTTGATGCA+TGG - chr1_3:57859087-57859106 Msa0128190:intron 40.0%
AGACATTGGTATTGTGGACA+AGG - chr1_3:57859110-57859129 Msa0128190:intron 40.0%
CACTGTCTCATTCTCACATA+AGG + chr1_3:57859181-57859200 None:intergenic 40.0%
TATGAGTATGGATCAACCTC+AGG - chr1_3:57859204-57859223 Msa0128190:CDS 40.0%
ACAATTCGTACTGCTAGTTC+TGG - chr1_3:57859258-57859277 Msa0128190:CDS 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - chr1_3:57859390-57859409 Msa0128190:CDS 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - chr1_3:57859404-57859423 Msa0128190:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + chr1_3:57859576-57859595 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - chr1_3:57859573-57859592 Msa0128190:CDS 40.0%
ATTAGGCTTCTTCCTGAGTT+CGG - chr1_3:57859855-57859874 Msa0128190:intron 40.0%
!! TTGGAAGGTACTTGTGATCT+AGG + chr1_3:57859921-57859940 None:intergenic 40.0%
CACACACTTTCATCATTGGA+AGG + chr1_3:57859936-57859955 None:intergenic 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - chr1_3:57859944-57859963 Msa0128190:intron 40.0%
GTCTAAGTGTGGAACAATGT+TGG - chr1_3:57859955-57859974 Msa0128190:intron 40.0%
AAGTGTGGAACAATGTTGGA+AGG - chr1_3:57859959-57859978 Msa0128190:intron 40.0%
AGTGTGGAACAATGTTGGAA+GGG - chr1_3:57859960-57859979 Msa0128190:intron 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - chr1_3:57860131-57860150 Msa0128190:intron 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - chr1_3:57860202-57860221 Msa0128190:CDS 40.0%
AACAAGGGAGATAAGAGAGA+TGG - chr1_3:57860409-57860428 Msa0128190:intron 40.0%
AGAGAGATGGAGAAACACTA+TGG - chr1_3:57860422-57860441 Msa0128190:intron 40.0%
! AACATGGTGTCAATGAGGCA+AGG + chr1_3:57854870-57854889 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG - chr1_3:57854869-57854888 Msa0128190:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - chr1_3:57854879-57854898 Msa0128190:intron 45.0%
GTGACCATGAGATACCAACA+TGG + chr1_3:57854886-57854905 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + chr1_3:57855064-57855083 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG - chr1_3:57855062-57855081 Msa0128190:CDS 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - chr1_3:57855201-57855220 Msa0128190:CDS 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + chr1_3:57855532-57855551 None:intergenic 45.0%
TGTGAACCATGACACTGGAA+TGG - chr1_3:57855531-57855550 Msa0128190:CDS 45.0%
TGAGGAAGCTGTATCTTGCA+AGG - chr1_3:57855912-57855931 Msa0128190:CDS 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - chr1_3:57856712-57856731 Msa0128190:intron 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + chr1_3:57856899-57856918 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG - chr1_3:57856958-57856977 Msa0128190:intron 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - chr1_3:57856967-57856986 Msa0128190:intron 45.0%
GGCAGGAAAAATGCAACTAG+AGG - chr1_3:57857327-57857346 Msa0128190:intron 45.0%
AACTACATCCTCAAGGAGAG+AGG + chr1_3:57857371-57857390 None:intergenic 45.0%
GGCACATAACAGTTAGAGCA+TGG - chr1_3:57857551-57857570 Msa0128190:CDS 45.0%
GAAGTGGATGATACAGGGAA+AGG - chr1_3:57857727-57857746 Msa0128190:CDS 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - chr1_3:57857802-57857821 Msa0128190:CDS 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - chr1_3:57857837-57857856 Msa0128190:CDS 45.0%
ATAATGCTCCTGACTCTCCT+CGG + chr1_3:57857977-57857996 None:intergenic 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG - chr1_3:57857977-57857996 Msa0128190:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG - chr1_3:57857978-57857997 Msa0128190:intron 45.0%
CTTGAGGGAGAGAGATTGTT+GGG + chr1_3:57858241-57858260 None:intergenic 45.0%
AACAAGTGGTTGCAATGTGC+TGG + chr1_3:57858333-57858352 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG - chr1_3:57858332-57858351 Msa0128190:CDS 45.0%
GCACATTGCAACCACTTGTT+GGG - chr1_3:57858333-57858352 Msa0128190:CDS 45.0%
GGGAGAATCTTGGGTTTATG+GGG + chr1_3:57858372-57858391 None:intergenic 45.0%
GAGGGAGAATCTTGGGTTTA+TGG + chr1_3:57858374-57858393 None:intergenic 45.0%
CTCACTTGAGGGAGAATCTT+GGG + chr1_3:57858381-57858400 None:intergenic 45.0%
ACTCACTTGAGGGAGAATCT+TGG + chr1_3:57858382-57858401 None:intergenic 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + chr1_3:57858425-57858444 None:intergenic 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG + chr1_3:57858457-57858476 None:intergenic 45.0%
! GGCACTAATACCACTTGTTG+GGG - chr1_3:57858468-57858487 Msa0128190:CDS 45.0%
TGGGGAATCTGAGGAAACAT+CGG - chr1_3:57858486-57858505 Msa0128190:CDS 45.0%
TGTGGTGTCTATGTCTCTTG+TGG + chr1_3:57858539-57858558 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1_3:57858557-57858576 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1_3:57858557-57858576 Msa0128190:intron 45.0%
CGTTTGATGCATGGAGACAT+TGG - chr1_3:57859096-57859115 Msa0128190:intron 45.0%
GCATGGAGACATTGGTATTG+TGG - chr1_3:57859104-57859123 Msa0128190:intron 45.0%
GGTATTGTGGACAAGGAAGT+TGG - chr1_3:57859117-57859136 Msa0128190:intron 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - chr1_3:57859126-57859145 Msa0128190:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + chr1_3:57859223-57859242 None:intergenic 45.0%
AGAATGACATGTGAAGGCTC+AGG + chr1_3:57859336-57859355 None:intergenic 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - chr1_3:57859500-57859519 Msa0128190:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - chr1_3:57859514-57859533 Msa0128190:CDS 45.0%
CAGGAAGAAGCCTAATGACT+TGG + chr1_3:57859851-57859870 None:intergenic 45.0%
! TTCCTGAGTTCGGTGGTAAT+TGG - chr1_3:57859865-57859884 Msa0128190:intron 45.0%
ATCCAATTACCACCGAACTC+AGG + chr1_3:57859870-57859889 None:intergenic 45.0%
CCTCTTCACCATTCTCACAT+TGG + chr1_3:57860172-57860191 None:intergenic 45.0%
CCAATGTGAGAATGGTGAAG+AGG - chr1_3:57860169-57860188 Msa0128190:CDS 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - chr1_3:57860191-57860210 Msa0128190:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG + chr1_3:57860368-57860387 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - chr1_3:57860373-57860392 Msa0128190:intron 45.0%
GAAATCCATTCCAGTCTCAG+TGG + chr1_3:57860495-57860514 None:intergenic 45.0%
CCACTTTGACCACGACAGTT+CGG + chr1_3:57855181-57855200 None:intergenic 50.0%
CAGTGTCATGGTTCACAGGT+TGG + chr1_3:57855528-57855547 None:intergenic 50.0%
CAACCTGTGAACCATGACAC+TGG - chr1_3:57855526-57855545 Msa0128190:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - chr1_3:57855706-57855725 Msa0128190:CDS 50.0%
ACTCGCATTGTCGATCGTCA+AGG - chr1_3:57855760-57855779 Msa0128190:CDS 50.0%
CTCGCATTGTCGATCGTCAA+GGG - chr1_3:57855761-57855780 Msa0128190:CDS 50.0%
TCTTGCAAGGAGCAAGCTGT+TGG - chr1_3:57855925-57855944 Msa0128190:CDS 50.0%
GACACAAGCAAGATTGAGGC+AGG - chr1_3:57857310-57857329 Msa0128190:intron 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - chr1_3:57857808-57857827 Msa0128190:CDS 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - chr1_3:57857821-57857840 Msa0128190:CDS 50.0%
ACAATCTGTTAGAGAGCCCG+AGG - chr1_3:57857957-57857976 Msa0128190:intron 50.0%
TAATGCTCCTGACTCTCCTC+GGG + chr1_3:57857976-57857995 None:intergenic 50.0%
CTCTCTCTCTCTCTCTCTCA+TGG + chr1_3:57858018-57858037 None:intergenic 50.0%
GCTTGAGGGAGAGAGATTGT+TGG + chr1_3:57858242-57858261 None:intergenic 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG + chr1_3:57858328-57858347 None:intergenic 50.0%
! CATTGCAACCACTTGTTGGG+CGG - chr1_3:57858336-57858355 Msa0128190:CDS 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + chr1_3:57858439-57858458 None:intergenic 50.0%
TCTTCCACCAAGCTGAACCA+AGG - chr1_3:57858447-57858466 Msa0128190:CDS 50.0%
! ACCACTTGTTGGGGAATCTG+AGG - chr1_3:57858477-57858496 Msa0128190:CDS 50.0%
TCCTCAGATTCCCCAACAAG+TGG + chr1_3:57858481-57858500 None:intergenic 50.0%
GGGGAATCTGAGGAAACATC+GGG - chr1_3:57858487-57858506 Msa0128190:CDS 50.0%
GGGAATCTGAGGAAACATCG+GGG - chr1_3:57858488-57858507 Msa0128190:CDS 50.0%
GGAATCTGAGGAAACATCGG+GGG - chr1_3:57858489-57858508 Msa0128190:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + chr1_3:57859306-57859325 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + chr1_3:57859513-57859532 None:intergenic 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - chr1_3:57860190-57860209 Msa0128190:CDS 50.0%
GACAGATGCCAGTGAAGGAT+GGG - chr1_3:57860378-57860397 Msa0128190:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - chr1_3:57860393-57860412 Msa0128190:intron 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - chr1_3:57860394-57860413 Msa0128190:intron 50.0%
CCGAACTGTCGTGGTCAAAG+TGG - chr1_3:57855178-57855197 Msa0128190:CDS 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - chr1_3:57857813-57857832 Msa0128190:CDS 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - chr1_3:57857814-57857833 Msa0128190:CDS 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + chr1_3:57857819-57857838 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - chr1_3:57857820-57857839 Msa0128190:CDS 55.0%
GGAGGTGAGAACTCGCTTGA+GGG + chr1_3:57858256-57858275 None:intergenic 55.0%
AGGAGGTGAGAACTCGCTTG+AGG + chr1_3:57858257-57858276 None:intergenic 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + chr1_3:57858305-57858324 None:intergenic 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG + chr1_3:57858323-57858342 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG + chr1_3:57858392-57858411 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG + chr1_3:57858393-57858412 None:intergenic 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + chr1_3:57858440-57858459 None:intergenic 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + chr1_3:57858446-57858465 None:intergenic 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG + chr1_3:57858454-57858473 None:intergenic 55.0%
GGAAACATCGGGGGCAACAA+CGG - chr1_3:57858498-57858517 Msa0128190:intron 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - chr1_3:57859310-57859329 Msa0128190:CDS 55.0%
AGGCTTCTTCCTGAGTTCGG+TGG - chr1_3:57859858-57859877 Msa0128190:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - chr1_3:57860377-57860396 Msa0128190:intron 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - chr1_3:57860385-57860404 Msa0128190:intron 55.0%
GCCTCAAACCCATCCTTCAC+TGG + chr1_3:57860389-57860408 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - chr1_3:57860482-57860501 Msa0128190:intron 55.0%
GCTGACCACTGAGACTGGAA+TGG - chr1_3:57860487-57860506 Msa0128190:intron 55.0%
TAGAGAGCCCGAGGAGAGTC+AGG - chr1_3:57857966-57857985 Msa0128190:intron 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + chr1_3:57858306-57858325 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG + chr1_3:57858320-57858339 None:intergenic 60.0%
CCAACAGACCGCCCAACAAG+TGG + chr1_3:57858347-57858366 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG - chr1_3:57858344-57858363 Msa0128190:CDS 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + chr1_3:57859314-57859333 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + chr1_3:57859323-57859342 None:intergenic 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + chr1_3:57859324-57859343 None:intergenic 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + chr1_3:57859325-57859344 None:intergenic 60.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG + chr1_3:57858312-57858331 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 57854632 57860589 57854632 ID=Msa0128190;Name=Msa0128190
chr1_3 mRNA 57854632 57860589 57854632 ID=Msa0128190-mRNA-1;Parent=Msa0128190;Name=Msa0128190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|7|0|1099
chr1_3 exon 57860551 57860589 57860551 ID=Msa0128190-mRNA-1:exon:18481;Parent=Msa0128190-mRNA-1
chr1_3 exon 57860138 57860374 57860138 ID=Msa0128190-mRNA-1:exon:18480;Parent=Msa0128190-mRNA-1
chr1_3 exon 57859201 57859866 57859201 ID=Msa0128190-mRNA-1:exon:18479;Parent=Msa0128190-mRNA-1
chr1_3 exon 57858110 57858515 57858110 ID=Msa0128190-mRNA-1:exon:18478;Parent=Msa0128190-mRNA-1
chr1_3 exon 57857363 57857931 57857363 ID=Msa0128190-mRNA-1:exon:18477;Parent=Msa0128190-mRNA-1
chr1_3 exon 57854953 57856128 57854953 ID=Msa0128190-mRNA-1:exon:18476;Parent=Msa0128190-mRNA-1
chr1_3 exon 57854632 57854838 57854632 ID=Msa0128190-mRNA-1:exon:18475;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57860551 57860589 57860551 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57860138 57860374 57860138 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57859201 57859866 57859201 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57858110 57858515 57858110 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57857363 57857931 57857363 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57854953 57856128 57854953 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
chr1_3 CDS 57854632 57854838 57854632 ID=Msa0128190-mRNA-1:cds;Parent=Msa0128190-mRNA-1
Gene Sequence

>Msa0128190

ATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAACGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGAAGCTGTATCTTGCAAGGAGCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATAATGGGAATAGAATCGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGGTGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTATCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACCCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAAGCCAAATTGCAAAAATCCAAGACTAACCACAAGAGTGTTATGAAACATTTGTCTTGGTTGTTTAGTAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTCGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAACCTAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAGTCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>Msa0128190

MALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEEAVSCKEQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMVMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDPCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNHKSVMKHLSWLFSKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNEPRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM*