AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0132370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132370 MtrunA17_Chr1g0201621 97.890 474 9 1 1 473 1 474 0.0 955
Msa0132370 MtrunA17_Chr1g0201311 96.835 474 14 1 1 473 1 474 0.0 947
Msa0132370 MtrunA17_Chr3g0125251 41.453 234 134 3 12 244 1253 1484 1.72e-55 200
Msa0132370 MtrunA17_Chr6g0477001 43.519 216 118 4 11 226 42 253 1.98e-48 169
Msa0132370 MtrunA17_Chr1g0201321 97.590 83 1 1 271 352 1 83 4.92e-48 160
Msa0132370 MtrunA17_Chr2g0305371 34.677 248 145 5 1 248 266 496 6.02e-41 153
Msa0132370 MtrunA17_Chr2g0297191 40.323 124 73 1 96 219 1044 1166 4.03e-23 103
Msa0132370 MtrunA17_Chr5g0403241 35.503 169 94 2 66 219 1334 1502 4.09e-23 103
Msa0132370 MtrunA17_Chr4g0075321 34.706 170 92 3 67 219 892 1059 4.43e-23 103
Msa0132370 MtrunA17_Chr8g0354821 32.836 201 97 6 61 224 489 688 5.65e-21 96.3
Msa0132370 MtrunA17_Chr7g0235081 39.844 128 70 1 85 205 195 322 1.05e-20 93.2
Msa0132370 MtrunA17_Chr5g0401921 36.095 169 92 3 42 203 672 831 1.06e-20 95.5
Msa0132370 MtrunA17_Chr3g0126701 36.242 149 91 3 78 223 915 1062 4.96e-20 93.6
Msa0132370 MtrunA17_Chr8g0347071 36.424 151 92 3 76 223 799 948 5.73e-20 93.6
Msa0132370 MtrunA17_Chr5g0399801 34.343 198 92 8 61 223 894 1088 7.30e-20 93.2
Msa0132370 MtrunA17_Chr8g0373821 34.337 166 95 3 67 219 369 533 8.21e-20 92.0
Msa0132370 MtrunA17_Chr7g0275611 38.158 152 88 4 76 223 814 963 1.14e-19 92.4
Msa0132370 MtrunA17_Chr7g0221611 36.943 157 89 3 90 245 911 1058 1.50e-19 92.0
Msa0132370 MtrunA17_Chr7g0255181 32.065 184 103 5 61 223 522 704 1.78e-19 91.7
Msa0132370 MtrunA17_Chr1g0147121 35.762 151 93 3 76 223 884 1033 2.55e-19 91.3
Msa0132370 MtrunA17_Chr4g0003511 31.658 199 90 7 61 220 857 1048 8.04e-19 89.7
Msa0132370 MtrunA17_Chr1g0194631 36.923 130 80 1 73 202 599 726 1.39e-18 89.0
Msa0132370 MtrunA17_Chr1g0170651 37.107 159 77 7 75 220 394 542 2.22e-18 87.8
Msa0132370 MtrunA17_Chr1g0149611 35.461 141 86 2 88 223 367 507 3.61e-18 87.0
Msa0132370 MtrunA17_Chr1g0149581 35.461 141 86 2 88 223 1525 1665 3.74e-18 88.2
Msa0132370 MtrunA17_Chr4g0003501 31.606 193 96 7 61 220 762 951 1.55e-17 85.9
Msa0132370 MtrunA17_Chr3g0080761 31.980 197 95 7 61 219 464 659 7.86e-17 83.2
Msa0132370 MtrunA17_Chr6g0460921 32.450 151 86 4 67 201 247 397 8.12e-15 76.3
Msa0132370 MtrunA17_Chr7g0270001 36.697 109 67 1 95 203 159 265 7.29e-14 72.4
Msa0132370 MtrunA17_Chr7g0232981 28.788 198 100 8 37 203 301 488 8.91e-14 73.6
Msa0132370 MtrunA17_Chr7g0252211 30.198 202 101 7 61 223 556 756 3.98e-13 71.6
Msa0132370 MtrunA17_Chr1g0183321 29.050 179 95 6 67 219 569 741 5.00e-13 71.6
Msa0132370 MtrunA17_Chr6g0476121 30.198 202 101 7 61 223 442 642 1.04e-11 67.4
Msa0132370 MtrunA17_Chr7g0262001 28.324 173 104 5 67 219 525 697 9.37e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0132370 AT1G76710.2 64.375 480 155 6 6 470 11 489 0.0 612
Msa0132370 AT1G76710.1 64.375 480 155 6 6 470 11 489 0.0 612
Msa0132370 AT1G76710.4 63.190 489 155 7 6 470 11 498 0.0 603
Msa0132370 AT1G76710.3 60.947 507 155 7 6 470 11 516 0.0 597
Msa0132370 AT1G77300.2 42.060 233 127 4 15 244 958 1185 2.90e-56 202
Msa0132370 AT1G77300.1 42.060 233 127 4 15 244 958 1185 2.96e-56 202
Msa0132370 AT4G30860.1 37.387 222 128 4 7 228 259 469 1.26e-40 152
Msa0132370 AT3G59960.3 43.503 177 78 4 67 226 81 252 2.16e-34 130
Msa0132370 AT3G59960.2 43.503 177 78 4 67 226 81 252 2.16e-34 130
Msa0132370 AT3G59960.4 43.503 177 78 4 67 226 81 252 2.16e-34 130
Msa0132370 AT2G44150.1 35.808 229 118 4 12 226 44 257 7.93e-34 131
Msa0132370 AT3G59960.1 42.775 173 85 2 67 226 81 252 1.22e-33 129
Msa0132370 AT5G42400.7 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.2 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.8 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.5 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.4 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.1 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.3 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT5G42400.6 42.742 124 70 1 96 219 1261 1383 3.69e-25 110
Msa0132370 AT1G05830.2 36.257 171 96 5 68 234 900 1061 9.24e-21 96.3
Msa0132370 AT1G05830.4 36.257 171 96 5 68 234 900 1061 9.24e-21 96.3
Msa0132370 AT1G05830.1 36.257 171 96 5 68 234 900 1061 9.24e-21 96.3
Msa0132370 AT1G05830.3 36.257 171 96 5 68 234 900 1061 9.24e-21 96.3
Msa0132370 AT2G35160.2 36.872 179 87 8 61 223 625 793 1.15e-20 95.9
Msa0132370 AT2G35160.3 36.872 179 87 8 61 223 625 793 1.15e-20 95.9
Msa0132370 AT2G35160.1 36.872 179 87 8 61 223 625 793 1.15e-20 95.9
Msa0132370 AT2G35160.4 36.872 179 87 8 61 223 625 793 1.15e-20 95.9
Msa0132370 AT2G35160.5 36.932 176 85 8 61 220 589 754 1.19e-20 95.9
Msa0132370 AT3G03750.2 36.667 180 94 6 59 219 167 345 2.86e-20 92.4
Msa0132370 AT4G27910.1 36.424 151 92 3 76 223 877 1026 3.48e-20 94.7
Msa0132370 AT1G02580.1 33.728 169 95 3 48 211 518 674 6.54e-20 93.2
Msa0132370 AT2G23740.3 37.255 153 75 4 66 200 1206 1355 8.86e-20 93.6
Msa0132370 AT2G23740.6 37.255 153 75 4 66 200 1206 1355 8.86e-20 93.6
Msa0132370 AT2G23740.2 37.255 153 75 4 66 200 1206 1355 8.86e-20 93.6
Msa0132370 AT2G23740.1 37.255 153 75 4 66 200 1199 1348 9.33e-20 93.6
Msa0132370 AT2G23380.1 38.168 131 79 1 73 203 741 869 1.72e-19 92.4
Msa0132370 AT3G61740.2 37.255 153 89 4 76 223 831 981 2.41e-19 92.0
Msa0132370 AT2G23380.2 38.168 131 79 1 73 203 514 642 2.69e-19 91.3
Msa0132370 AT3G61740.1 37.255 153 89 4 76 223 867 1017 2.70e-19 91.7
Msa0132370 AT2G31650.1 35.673 171 97 5 68 234 879 1040 6.71e-19 90.5
Msa0132370 AT5G53430.1 35.099 151 94 3 76 223 893 1042 5.05e-18 87.8
Msa0132370 AT4G02020.1 36.154 130 81 1 73 202 696 823 5.77e-18 87.4
Msa0132370 AT5G04940.2 30.653 199 101 7 61 224 474 670 3.44e-17 84.7
Msa0132370 AT5G04940.1 30.653 199 101 7 61 224 474 670 3.44e-17 84.7
Msa0132370 AT2G22740.2 32.512 203 96 8 58 223 591 789 2.43e-16 82.4
Msa0132370 AT2G22740.1 32.512 203 96 8 58 223 591 789 2.43e-16 82.4
Msa0132370 AT1G17770.1 32.105 190 93 8 65 219 500 688 2.87e-16 82.0
Msa0132370 AT2G24740.1 28.796 191 100 6 69 224 566 755 1.30e-14 77.0
Msa0132370 AT2G23740.4 39.286 112 51 3 66 163 1206 1314 3.94e-14 75.9
Msa0132370 AT2G23740.5 39.286 112 51 3 66 163 1206 1314 3.94e-14 75.9
Msa0132370 AT3G04380.1 28.261 184 94 7 67 221 285 459 3.75e-12 68.6
Msa0132370 AT3G04380.2 28.261 184 94 7 67 221 258 432 3.91e-12 68.6
Msa0132370 AT3G04380.6 28.261 184 94 7 67 221 258 432 4.05e-12 68.6
Msa0132370 AT3G04380.3 28.261 184 94 7 67 221 269 443 4.09e-12 68.6
Msa0132370 AT3G04380.4 28.261 184 94 7 67 221 285 459 4.18e-12 68.6
Msa0132370 AT3G04380.5 28.261 184 94 7 67 221 242 416 5.19e-12 68.2

Find 124 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAAATTTGTTGGTGAAAA+AGG 0.121521 1_3:-63360824 Msa0132370:five_prime_UTR
AGGCCGAGGGTGGGGTCTTT+TGG 0.223348 1_3:-63357524 Msa0132370:CDS
GACCTTGAGTTTCATAAGTA+TGG 0.226901 1_3:+63357316 None:intergenic
TGAATAGGGAATTTGATTTC+TGG 0.240243 1_3:+63360733 None:intergenic
TTTGGCTGATGAGGAAATTA+AGG 0.256975 1_3:-63357506 Msa0132370:intron
TCTCAGGTTATTCATTGATA+TGG 0.257467 1_3:-63360597 Msa0132370:intron
GTGCTTCCTTTGATGCTAAA+AGG 0.263819 1_3:+63355526 None:intergenic
GAAGATCCTGTTTGGTATCT+TGG 0.294712 1_3:+63355679 None:intergenic
CAAGATTTATAAACCATTCC+TGG 0.303845 1_3:-63357142 Msa0132370:intron
CAATAAGAGGAATGGGAAAA+TGG 0.327420 1_3:+63360631 None:intergenic
AGAAGCGAGAAAAGGGGTTT+GGG 0.332370 1_3:+63360667 None:intergenic
ATTCAACCACTGAATTCAAT+TGG 0.332627 1_3:-63355768 Msa0132370:CDS
GCACTGGAAGATATTCCTAT+TGG 0.334570 1_3:-63356921 Msa0132370:CDS
CAAACTGTGAGACAAGAAAA+TGG 0.346413 1_3:-63356977 Msa0132370:CDS
AGCAGGAGGATACTTATCTA+TGG 0.346424 1_3:-63356329 Msa0132370:intron
ATGATCGAAGAAATTTGAAT+AGG 0.356481 1_3:+63360718 None:intergenic
AAGATCCTGTTTGGTATCTT+GGG 0.359715 1_3:+63355680 None:intergenic
CAGAAGCGAGAAAAGGGGTT+TGG 0.375404 1_3:+63360666 None:intergenic
GCTTGGCCGGGTGCCCTTTG+AGG 0.389466 1_3:+63354846 None:intergenic
ATCCTTCTCGTGTTCTTCAA+TGG 0.405165 1_3:+63354983 None:intergenic
CTGAATTCAATTGGGATCAA+TGG 0.406898 1_3:-63355759 Msa0132370:CDS
TATCATACAGTAAAATTTGT+TGG 0.409284 1_3:-63360833 Msa0132370:five_prime_UTR
TGATCGAAGAAATTTGAATA+GGG 0.412142 1_3:+63360719 None:intergenic
GAAGCGAGAAAAGGGGTTTG+GGG 0.412473 1_3:+63360668 None:intergenic
ATTCTTTATACAATGAAATA+CGG 0.412721 1_3:-63355010 Msa0132370:CDS
TCCTCCGCAGAGTCATATAA+AGG 0.419793 1_3:+63355882 None:intergenic
CCCGACAGTGCCTGTGGAGA+TGG 0.424956 1_3:-63358300 Msa0132370:CDS
AAGCGAGAAAAGGGGTTTGG+GGG 0.426634 1_3:+63360669 None:intergenic
CTCAAATGTTCTGAATTCCT+TGG 0.432418 1_3:-63356828 Msa0132370:CDS
ATGCCACAAGGGCAAAATCC+AGG 0.434511 1_3:+63358243 None:intergenic
TTTCATTGTATAAAGAATCA+AGG 0.435719 1_3:+63355015 None:intergenic
TTCTCGTGTTCTTCAATGGC+AGG 0.436989 1_3:+63354987 None:intergenic
ATCTCTACCAAAAGATCAAA+GGG 0.444160 1_3:-63355603 Msa0132370:CDS
AGCTTGCAGAAGCGAGAAAA+GGG 0.459582 1_3:+63360660 None:intergenic
CTTCTTGCGTTGCGTTGCGT+TGG 0.461571 1_3:+63360769 None:intergenic
TATTCCTATTGGAACTGAAC+TGG 0.465129 1_3:-63356910 Msa0132370:CDS
ATAAGTATGGGATCTGCGCT+TGG 0.465834 1_3:+63357329 None:intergenic
AGTAGCAGAGAAGTGGATAC+AGG 0.474675 1_3:-63354937 Msa0132370:CDS
TTGAAGAGGTTTACCAGGAA+TGG 0.476963 1_3:+63357129 None:intergenic
ACCAGCACTGAATGCACCCC+TGG 0.480052 1_3:-63358261 Msa0132370:CDS
TATGCCAGTTCAGTTCCAAT+AGG 0.481653 1_3:+63356906 None:intergenic
TCAATTGGGATCAATGGCTT+AGG 0.484206 1_3:-63355753 Msa0132370:CDS
AAAACTGAAGGCCGAGGGTG+GGG 0.484563 1_3:-63357532 Msa0132370:CDS
GAACAAAAGTTGGCAATAAG+AGG 0.484609 1_3:+63360618 None:intergenic
ACCTTGAGTTTCATAAGTAT+GGG 0.487157 1_3:+63357317 None:intergenic
GCGAGAAAAGGGGTTTGGGG+GGG 0.487175 1_3:+63360671 None:intergenic
TTCAACCACTGAATTCAATT+GGG 0.488608 1_3:-63355767 Msa0132370:CDS
AGCTTTCAGTATAATAGCCA+TGG 0.489595 1_3:+63355821 None:intergenic
TCTATCGATGCAACTAGAAA+AGG 0.490560 1_3:-63357173 Msa0132370:CDS
AGGGCACCCGGCCAAGCAAA+AGG 0.495569 1_3:-63354840 Msa0132370:CDS
AAAGTTGGCAATAAGAGGAA+TGG 0.497255 1_3:+63360623 None:intergenic
AAGTTGGCAATAAGAGGAAT+GGG 0.502123 1_3:+63360624 None:intergenic
TGTCGTAGATACACTGTCTT+GGG 0.502526 1_3:+63354959 None:intergenic
CCATCTCCACAGGCACTGTC+GGG 0.506283 1_3:+63358300 None:intergenic
AAGCTTGCAGAAGCGAGAAA+AGG 0.513314 1_3:+63360659 None:intergenic
CCCATCTCCACAGGCACTGT+CGG 0.518933 1_3:+63358299 None:intergenic
AGCGAGAAAAGGGGTTTGGG+GGG 0.519042 1_3:+63360670 None:intergenic
ACCAAGTTATTTAAAACTGA+AGG 0.520954 1_3:-63357544 Msa0132370:CDS
AAGAGTTGGAATATTTGCAC+TGG 0.522066 1_3:-63356937 Msa0132370:CDS
CCGACAGTGCCTGTGGAGAT+GGG 0.523601 1_3:-63358299 Msa0132370:CDS
TTCATTGTATAAAGAATCAA+GGG 0.526900 1_3:+63355016 None:intergenic
TCCAGGGGTGCATTCAGTGC+TGG 0.526955 1_3:+63358260 None:intergenic
TGTTGCTTGTACTCCTCAAA+GGG 0.529187 1_3:-63354859 Msa0132370:CDS
ATGTTGCTTGTACTCCTCAA+AGG 0.530019 1_3:-63354860 Msa0132370:CDS
TGCCACAAGGGCAAAATCCA+GGG 0.530653 1_3:+63358244 None:intergenic
AATAACCTGAGAACAAAAGT+TGG 0.533960 1_3:+63360608 None:intergenic
AATGGTTTATAAATCTTGCA+AGG 0.536559 1_3:+63357147 None:intergenic
CAGCCAAAAGACCCCACCCT+CGG 0.537785 1_3:+63357521 None:intergenic
CATCTCTACCAAAAGATCAA+AGG 0.539479 1_3:-63355604 Msa0132370:CDS
CGCATTCGAAGTAACACTGC+AGG 0.543043 1_3:-63355636 Msa0132370:CDS
CTGTCGTAGATACACTGTCT+TGG 0.543309 1_3:+63354958 None:intergenic
ACAAGAAAATGGAATGTCAT+GGG 0.544715 1_3:-63356966 Msa0132370:CDS
ATTGATGCAAAGTATGCAGC+TGG 0.547593 1_3:-63355549 Msa0132370:CDS
TTTAGCATCAAAGGAAGCAC+AGG 0.547737 1_3:-63355523 Msa0132370:CDS
TGATTGATATGAATGTATTG+AGG 0.557044 1_3:+63360434 None:intergenic
TGAATGGTTTGGAGGTGCAA+AGG 0.560782 1_3:-63356871 Msa0132370:CDS
GCAGGAGGATACTTATCTAT+GGG 0.561610 1_3:-63356328 Msa0132370:intron
TAAAACTGAAGGCCGAGGGT+GGG 0.562493 1_3:-63357533 Msa0132370:CDS
CTACGACAGTAGCAGAGAAG+TGG 0.567208 1_3:-63354944 Msa0132370:CDS
AGCATCAAAGGAAGCACAGG+AGG 0.568189 1_3:-63355520 Msa0132370:CDS
GACAAGAAAATGGAATGTCA+TGG 0.568296 1_3:-63356967 Msa0132370:CDS
TTGATCCCAATTGAATTCAG+TGG 0.569284 1_3:+63355762 None:intergenic
GCATAAGAAGCAGAAGGAGG+AGG 0.570658 1_3:-63358361 Msa0132370:CDS
GTACTCCCAAGATACCAAAC+AGG 0.572352 1_3:-63355685 Msa0132370:CDS
ATATTGCTATATGTGAATGC+AGG 0.572676 1_3:-63358338 Msa0132370:CDS
TATGGGAAGATGATGATGAC+AGG 0.584972 1_3:-63356311 Msa0132370:intron
TTCCTTGGAGCAAAATCTCG+TGG 0.586918 1_3:-63356813 Msa0132370:CDS
TTATTTAAAACTGAAGGCCG+AGG 0.589346 1_3:-63357538 Msa0132370:CDS
TTTAAAACAGTGGACTCCGA+TGG 0.593496 1_3:+63355792 None:intergenic
GATGAACTCACGTCAAATGT+TGG 0.593891 1_3:-63355861 Msa0132370:CDS
GGCTTCCTGCCTAAAACTCA+AGG 0.598288 1_3:-63354916 Msa0132370:CDS
TGCCATTGAAGAACACGAGA+AGG 0.599044 1_3:-63354985 Msa0132370:CDS
ACTGAAAGCTGAAGAACCAT+CGG 0.600098 1_3:-63355808 Msa0132370:CDS
GTGCAGGCATAAGAAGCAGA+AGG 0.601872 1_3:-63358367 Msa0132370:intron
TGGACAGAGTGAACAATCCA+TGG 0.605363 1_3:-63355838 Msa0132370:CDS
TTAAAACTGAAGGCCGAGGG+TGG 0.605393 1_3:-63357534 Msa0132370:CDS
TGTACTCCTCAAAGGGCACC+CGG 0.607570 1_3:-63354852 Msa0132370:CDS
AAATAGAAAGCGAGGACATG+AGG 0.607787 1_3:-63355710 Msa0132370:CDS
GAAAAGAAAAGATGACGCTA+CGG 0.608952 1_3:-63355042 Msa0132370:CDS
CTCTACCAAAAGATCAAAGG+GGG 0.611270 1_3:-63355601 Msa0132370:CDS
GAAAACTGAAATAGAAAGCG+AGG 0.615849 1_3:-63355718 Msa0132370:CDS
TCCTTTATATGACTCTGCGG+AGG 0.618388 1_3:-63355883 Msa0132370:CDS
TATTTAAAACTGAAGGCCGA+GGG 0.619845 1_3:-63357537 Msa0132370:CDS
CGTTGGTACTGTAGTGGTAG+CGG 0.621056 1_3:+63360786 None:intergenic
TCCCATACTTATGAAACTCA+AGG 0.623281 1_3:-63357318 Msa0132370:intron
GCAAAGGTTCGCTGCCTCTG+TGG 0.623435 1_3:-63356855 Msa0132370:CDS
ATTTAGACACCCATCTCCAC+AGG 0.625505 1_3:+63358290 None:intergenic
GGCAAATCTTCAGCAGCATG+AGG 0.632645 1_3:+63360455 None:intergenic
CAGTTTGTCATTGAATACTG+TGG 0.640591 1_3:-63357375 Msa0132370:CDS
CAAGAAAATGGAATGTCATG+GGG 0.642373 1_3:-63356965 Msa0132370:CDS
GAACTCACGTCAAATGTTGG+TGG 0.647867 1_3:-63355858 Msa0132370:CDS
CAGGCATAAGAAGCAGAAGG+AGG 0.647886 1_3:-63358364 Msa0132370:CDS
TGGTTGAATATTTAAAACAG+TGG 0.648383 1_3:+63355782 None:intergenic
ATTCGAAGTAACACTGCAGG+AGG 0.651046 1_3:-63355633 Msa0132370:CDS
GATGATCCCGACAGTGCCTG+TGG 0.661300 1_3:-63358306 Msa0132370:CDS
GCGTTGCGTTGGTACTGTAG+TGG 0.671813 1_3:+63360780 None:intergenic
AACATTTGAGCGCACCACAG+AGG 0.676482 1_3:+63356841 None:intergenic
GCTTGCAGAAGCGAGAAAAG+GGG 0.677415 1_3:+63360661 None:intergenic
GCCACAAGGGCAAAATCCAG+GGG 0.678890 1_3:+63358245 None:intergenic
AAGAAAATGGAATGTCATGG+GGG 0.698806 1_3:-63356964 Msa0132370:CDS
AATTCCTTTATATGACTCTG+CGG 0.704826 1_3:-63355886 Msa0132370:CDS
TCTACCAAAAGATCAAAGGG+GGG 0.707770 1_3:-63355600 Msa0132370:CDS
TCTCTACCAAAAGATCAAAG+GGG 0.724844 1_3:-63355602 Msa0132370:CDS
TTCCTGCCTAAAACTCAAGG+CGG 0.738527 1_3:-63354913 Msa0132370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTCTTTTGATATATTA+CGG - chr1_3:63359040-63359059 Msa0132370:intron 10.0%
!! ATTATTAAAATAATCATCTT+TGG + chr1_3:63360290-63360309 None:intergenic 10.0%
!! AAACAAAATTGTAATAAAGA+GGG + chr1_3:63355091-63355110 None:intergenic 15.0%
!!! CATTTTCTTATCATTTATTT+AGG - chr1_3:63355277-63355296 Msa0132370:intron 15.0%
!! TTGTTAAAAATATTATCACT+CGG - chr1_3:63355361-63355380 Msa0132370:intron 15.0%
!!! TCAGTTTTATAAAGAAAAAA+AGG + chr1_3:63355638-63355657 None:intergenic 15.0%
!!! AAAAAATGCTCAAAATATTT+TGG + chr1_3:63356314-63356333 None:intergenic 15.0%
!! AAAGAAAAATAACCATATTA+AGG + chr1_3:63358195-63358214 None:intergenic 15.0%
!! AATCCTAATATTAAATGAAA+TGG - chr1_3:63358549-63358568 Msa0132370:intron 15.0%
!!! TCTTTTTCATTGATTATTAT+TGG - chr1_3:63359255-63359274 Msa0132370:intron 15.0%
!! ATTCTTTATACAATGAAATA+CGG - chr1_3:63360640-63360659 Msa0132370:five_prime_UTR 15.0%
!! TATCATACAGTAAAATTTGT+TGG - chr1_3:63354817-63354836 Msa0132370:CDS 20.0%
!!! TAAAATTTGTTGGTGAAAAA+GGG - chr1_3:63354827-63354846 Msa0132370:CDS 20.0%
!! GAAACAAAATTGTAATAAAG+AGG + chr1_3:63355092-63355111 None:intergenic 20.0%
!!! AAAATGATTTTTTTATGCGA+AGG - chr1_3:63355238-63355257 Msa0132370:intron 20.0%
!! ATTACTGTTATGAGTTATTT+AGG - chr1_3:63355440-63355459 Msa0132370:intron 20.0%
!!! TTATGAGTTATTTAGGTTAT+AGG - chr1_3:63355447-63355466 Msa0132370:intron 20.0%
!! AATATTGAAAATTATTGGAC+CGG + chr1_3:63355560-63355579 None:intergenic 20.0%
!! AATTCAATATGGAAAAGTTT+CGG + chr1_3:63356144-63356163 None:intergenic 20.0%
!! TTTATAATCAGAAAAAGAGA+GGG + chr1_3:63356241-63356260 None:intergenic 20.0%
!!! TTTTATAATCAGAAAAAGAG+AGG + chr1_3:63356242-63356261 None:intergenic 20.0%
!! TTTAGTAGAACTAAAACAAA+GGG + chr1_3:63356602-63356621 None:intergenic 20.0%
!! ATTTAGTAGAACTAAAACAA+AGG + chr1_3:63356603-63356622 None:intergenic 20.0%
!! CAGAACATTATATTGTATAT+AGG - chr1_3:63356944-63356963 Msa0132370:CDS 20.0%
!!! AAAAAGTATGCAATGAAAAT+AGG + chr1_3:63357721-63357740 None:intergenic 20.0%
!! AAATTAAGGTAATCATATAC+TGG - chr1_3:63358158-63358177 Msa0132370:intron 20.0%
!! AATTAAGGTAATCATATACT+GGG - chr1_3:63358159-63358178 Msa0132370:intron 20.0%
!! TTTGTTTGTTTATTTCATAC+AGG - chr1_3:63358247-63358266 Msa0132370:CDS 20.0%
!!! CATATGACTATAATTTTGAA+TGG - chr1_3:63358763-63358782 Msa0132370:intron 20.0%
!! TTCAGTGTTAATAAATAATG+AGG - chr1_3:63359093-63359112 Msa0132370:intron 20.0%
!!! TTATGTAAGTTTTGATATAG+TGG - chr1_3:63359138-63359157 Msa0132370:intron 20.0%
!! AATAATCAATGAAAAAGAGA+AGG + chr1_3:63359253-63359272 None:intergenic 20.0%
!! GTTCTTACAAATTATAACAA+GGG + chr1_3:63360345-63360364 None:intergenic 20.0%
!! TGTTCTTACAAATTATAACA+AGG + chr1_3:63360346-63360365 None:intergenic 20.0%
!! TTCATTGTATAAAGAATCAA+GGG + chr1_3:63360637-63360656 None:intergenic 20.0%
!! TTTCATTGTATAAAGAATCA+AGG + chr1_3:63360638-63360657 None:intergenic 20.0%
!!! GTAAAATTTGTTGGTGAAAA+AGG - chr1_3:63354826-63354845 Msa0132370:CDS 25.0%
! TGATCGAAGAAATTTGAATA+GGG + chr1_3:63354934-63354953 None:intergenic 25.0%
! ATGATCGAAGAAATTTGAAT+AGG + chr1_3:63354935-63354954 None:intergenic 25.0%
! TGATTGATATGAATGTATTG+AGG + chr1_3:63355219-63355238 None:intergenic 25.0%
! TAACTGGTTATGTTAATTAC+TGG - chr1_3:63355393-63355412 Msa0132370:intron 25.0%
!! GAACTTTTCTGTATTCAATT+AGG - chr1_3:63355493-63355512 Msa0132370:intron 25.0%
! CAGCGAATATTGAAAATTAT+TGG + chr1_3:63355565-63355584 None:intergenic 25.0%
!! ATAATTTTCAATATTCGCTG+AGG - chr1_3:63355565-63355584 Msa0132370:CDS 25.0%
!! GAAGACAAATCAATTTTTGT+TGG - chr1_3:63355656-63355675 Msa0132370:CDS 25.0%
!! ACAAATCAATTTTTGTTGGT+GGG - chr1_3:63355660-63355679 Msa0132370:CDS 25.0%
! AACATCGATCAATCAATTAA+CGG - chr1_3:63355808-63355827 Msa0132370:CDS 25.0%
! TTGAAGAATATATCCATTGA+AGG + chr1_3:63356011-63356030 None:intergenic 25.0%
! ATATTCTTCAATGTAACTTC+CGG - chr1_3:63356020-63356039 Msa0132370:intron 25.0%
! AAAAAAATTGATATATCCGC+CGG + chr1_3:63356117-63356136 None:intergenic 25.0%
! ATTCAATATGGAAAAGTTTC+GGG + chr1_3:63356143-63356162 None:intergenic 25.0%
! AGCTAGTGAACAAATAATAA+AGG + chr1_3:63356265-63356284 None:intergenic 25.0%
! AGGATATAATACAATTCGAT+TGG + chr1_3:63357072-63357091 None:intergenic 25.0%
! TCCTATTTAAATCCAAACAA+TGG - chr1_3:63357088-63357107 Msa0132370:intron 25.0%
! TCCATTGTTTGGATTTAAAT+AGG + chr1_3:63357092-63357111 None:intergenic 25.0%
!!! TTGCATATTTTTTTTTCGAG+TGG - chr1_3:63357597-63357616 Msa0132370:intron 25.0%
!! ATCTGAAGTAAAGTTTAAGT+AGG + chr1_3:63357755-63357774 None:intergenic 25.0%
! GAAAACGAGAATATTTCTTT+AGG + chr1_3:63358006-63358025 None:intergenic 25.0%
!! ACCAAGTTATTTAAAACTGA+AGG - chr1_3:63358106-63358125 Msa0132370:intron 25.0%
! ATTAAGGTAATCATATACTG+GGG - chr1_3:63358160-63358179 Msa0132370:intron 25.0%
! CAAATAAATAAATGAGCGTA+TGG + chr1_3:63358231-63358250 None:intergenic 25.0%
! AATGGTTTATAAATCTTGCA+AGG + chr1_3:63358506-63358525 None:intergenic 25.0%
!!! ATTAGGATTTTTGTTTGAAG+AGG + chr1_3:63358538-63358557 None:intergenic 25.0%
! GGTCCATTTCATTTAATATT+AGG + chr1_3:63358555-63358574 None:intergenic 25.0%
!! GACTATAATTTTGAATGGTT+TGG - chr1_3:63358768-63358787 Msa0132370:intron 25.0%
!!! TATAATTTTGAATGGTTTGG+AGG - chr1_3:63358771-63358790 Msa0132370:intron 25.0%
!!! TCAAGCGTTTTAACATTTAT+AGG + chr1_3:63358897-63358916 None:intergenic 25.0%
! AAAAAACTAAGCACAAAAGT+GGG + chr1_3:63359529-63359548 None:intergenic 25.0%
! AAATACTTTGAATTGCTTTC+AGG + chr1_3:63359573-63359592 None:intergenic 25.0%
!!! TTATATGGTTTTGGATAAAG+AGG + chr1_3:63359613-63359632 None:intergenic 25.0%
! TTGATATTGCAGAAGTTATA+TGG + chr1_3:63359628-63359647 None:intergenic 25.0%
!!! ATATCCTGGTTTTAAAGTTT+TGG - chr1_3:63359707-63359726 Msa0132370:intron 25.0%
!!! TAAACCAAAACTTTAAAACC+AGG + chr1_3:63359714-63359733 None:intergenic 25.0%
!! TGGTTGAATATTTAAAACAG+TGG + chr1_3:63359871-63359890 None:intergenic 25.0%
! AGATGATGATATTCAGTAAT+TGG + chr1_3:63360205-63360224 None:intergenic 25.0%
! AACTACAAAGTTAAAATACC+AGG + chr1_3:63360267-63360286 None:intergenic 25.0%
!! GCCAAAATAATTGAATTTTC+AGG - chr1_3:63360440-63360459 Msa0132370:CDS 25.0%
!! GCCTGAAAATTCAATTATTT+TGG + chr1_3:63360444-63360463 None:intergenic 25.0%
!! TGATTGTCATTTATATTCTC+TGG - chr1_3:63360550-63360569 Msa0132370:intron 25.0%
! TGAATAGGGAATTTGATTTC+TGG + chr1_3:63354920-63354939 None:intergenic 30.0%
AATAACCTGAGAACAAAAGT+TGG + chr1_3:63355045-63355064 None:intergenic 30.0%
TCTCAGGTTATTCATTGATA+TGG - chr1_3:63355053-63355072 Msa0132370:intron 30.0%
TCACATAAAGTCGAATATGA+AGG + chr1_3:63355114-63355133 None:intergenic 30.0%
TGCTATCTTCTACTTATGAT+TGG - chr1_3:63355315-63355334 Msa0132370:intron 30.0%
GTATTCAATTAGGCTTACTT+TGG - chr1_3:63355503-63355522 Msa0132370:CDS 30.0%
!! TTGGATTAGTTTCTCTCTTA+TGG - chr1_3:63355522-63355541 Msa0132370:CDS 30.0%
! ATTAGTTTCTCTCTTATGGT+AGG - chr1_3:63355526-63355545 Msa0132370:CDS 30.0%
! GACAAATCAATTTTTGTTGG+TGG - chr1_3:63355659-63355678 Msa0132370:CDS 30.0%
AATTGATTGATCGATGTTAC+CGG + chr1_3:63355806-63355825 None:intergenic 30.0%
TATATCCATTGAAGGAAGAT+TGG + chr1_3:63356003-63356022 None:intergenic 30.0%
!!! TATTTTGACCTATGTCATAC+TGG - chr1_3:63356065-63356084 Msa0132370:intron 30.0%
!! ATTTTGACCTATGTCATACT+GGG - chr1_3:63356066-63356085 Msa0132370:intron 30.0%
AATGAAAATATCCACTAGCT+GGG + chr1_3:63356172-63356191 None:intergenic 30.0%
AAATGAAAATATCCACTAGC+TGG + chr1_3:63356173-63356192 None:intergenic 30.0%
! AGTGCTTGTATTTGTTAGAT+AGG - chr1_3:63356365-63356384 Msa0132370:intron 30.0%
ACATTAAAGATGAAAGAGAG+AGG + chr1_3:63356438-63356457 None:intergenic 30.0%
AGTAAAAACCATCATTCTCA+TGG - chr1_3:63356532-63356551 Msa0132370:intron 30.0%
GTAAAAACCATCATTCTCAT+GGG - chr1_3:63356533-63356552 Msa0132370:intron 30.0%
! TCTAGAGAGTTTACTCTTTT+AGG + chr1_3:63356707-63356726 None:intergenic 30.0%
! TAGTGCGATATTTGATTTCA+GGG + chr1_3:63356801-63356820 None:intergenic 30.0%
ATATTGCTATATGTGAATGC+AGG - chr1_3:63357312-63357331 Msa0132370:intron 30.0%
! AACTCACCTGATTTTTACAA+AGG + chr1_3:63357433-63357452 None:intergenic 30.0%
CTTGTAGAACAAAATAACCA+GGG + chr1_3:63357653-63357672 None:intergenic 30.0%
ACTTGTAGAACAAAATAACC+AGG + chr1_3:63357654-63357673 None:intergenic 30.0%
TTCTAGTCAGTTAACTTAAC+TGG - chr1_3:63357840-63357859 Msa0132370:intron 30.0%
! AACTTTTCTTCTAAGTAGTG+CGG - chr1_3:63357936-63357955 Msa0132370:intron 30.0%
GCTATAGATATCATTGCAAT+CGG - chr1_3:63357958-63357977 Msa0132370:intron 30.0%
!!! GCCTTCAGTTTTAAATAACT+TGG + chr1_3:63358110-63358129 None:intergenic 30.0%
TTTGTTTATTTCATACAGGC+AGG - chr1_3:63358251-63358270 Msa0132370:CDS 30.0%
ACCTTGAGTTTCATAAGTAT+GGG + chr1_3:63358336-63358355 None:intergenic 30.0%
!! AAACTTTTGTTTGCTTTTGC+AGG - chr1_3:63358414-63358433 Msa0132370:intron 30.0%
CAAGATTTATAAACCATTCC+TGG - chr1_3:63358508-63358527 Msa0132370:intron 30.0%
AAATAGGAGGATAACAAAAC+AGG + chr1_3:63358601-63358620 None:intergenic 30.0%
ACAAGAAAATGGAATGTCAT+GGG - chr1_3:63358684-63358703 Msa0132370:intron 30.0%
! AGTTAAGCCTTTTAAATGCA+TGG - chr1_3:63358943-63358962 Msa0132370:intron 30.0%
! GTTAAGCCTTTTAAATGCAT+GGG - chr1_3:63358944-63358963 Msa0132370:intron 30.0%
GTGTTAATAAATAATGAGGC+TGG - chr1_3:63359097-63359116 Msa0132370:intron 30.0%
AAAAACTAAGCACAAAAGTG+GGG + chr1_3:63359528-63359547 None:intergenic 30.0%
CAAAAAACTAAGCACAAAAG+TGG + chr1_3:63359530-63359549 None:intergenic 30.0%
! TTGCAGAAGTTATATGGTTT+TGG + chr1_3:63359622-63359641 None:intergenic 30.0%
TCATATTTCTTGTCATATCC+TGG - chr1_3:63359693-63359712 Msa0132370:intron 30.0%
AATTCCTTTATATGACTCTG+CGG - chr1_3:63359764-63359783 Msa0132370:intron 30.0%
ATTCAACCACTGAATTCAAT+TGG - chr1_3:63359882-63359901 Msa0132370:intron 30.0%
TTCAACCACTGAATTCAATT+GGG - chr1_3:63359883-63359902 Msa0132370:intron 30.0%
ATCTCTACCAAAAGATCAAA+GGG - chr1_3:63360047-63360066 Msa0132370:intron 30.0%
GCTTTCAATTATGTTACTAG+TGG - chr1_3:63360226-63360245 Msa0132370:intron 30.0%
CAATAAGAGGAATGGGAAAA+TGG + chr1_3:63355022-63355041 None:intergenic 35.0%
AAGTTGGCAATAAGAGGAAT+GGG + chr1_3:63355029-63355048 None:intergenic 35.0%
AAAGTTGGCAATAAGAGGAA+TGG + chr1_3:63355030-63355049 None:intergenic 35.0%
GAACAAAAGTTGGCAATAAG+AGG + chr1_3:63355035-63355054 None:intergenic 35.0%
! TATTGCCAACTTTTGTTCTC+AGG - chr1_3:63355037-63355056 Msa0132370:CDS 35.0%
!!! GACTTTTTTATCTGCGTATG+AGG - chr1_3:63355612-63355631 Msa0132370:CDS 35.0%
ATTGAGAAGAGAACCTACAA+GGG + chr1_3:63355725-63355744 None:intergenic 35.0%
AATTGAGAAGAGAACCTACA+AGG + chr1_3:63355726-63355745 None:intergenic 35.0%
ATTGATTGATCGATGTTACC+GGG + chr1_3:63355805-63355824 None:intergenic 35.0%
ATCGATCAATCAATTAACGG+CGG - chr1_3:63355811-63355830 Msa0132370:CDS 35.0%
TTGAAGGAAGATTGGACAAT+GGG + chr1_3:63355995-63356014 None:intergenic 35.0%
ATTGAAGGAAGATTGGACAA+TGG + chr1_3:63355996-63356015 None:intergenic 35.0%
ATTGTCCAATCTTCCTTCAA+TGG - chr1_3:63355995-63356014 Msa0132370:intron 35.0%
GCTGGGAGATTAATTCAATA+TGG + chr1_3:63356155-63356174 None:intergenic 35.0%
AAAGAGAGGGATAAGAGAAT+TGG + chr1_3:63356228-63356247 None:intergenic 35.0%
!!! AAAATATTTTGGTTGCGAGG+CGG + chr1_3:63356303-63356322 None:intergenic 35.0%
!!! CTCAAAATATTTTGGTTGCG+AGG + chr1_3:63356306-63356325 None:intergenic 35.0%
TGTACTCTTACAAAAGCAGA+GGG + chr1_3:63356415-63356434 None:intergenic 35.0%
! CTTTTAGGCGAATAGCAATA+AGG + chr1_3:63356692-63356711 None:intergenic 35.0%
TAGAAATTTCATCCGACTTC+TGG - chr1_3:63356723-63356742 Msa0132370:intron 35.0%
TGACTAAAAACTATCCCACA+AGG + chr1_3:63356749-63356768 None:intergenic 35.0%
!!! TGGGATAGTTTTTAGTCAGT+GGG - chr1_3:63356751-63356770 Msa0132370:intron 35.0%
!! TTTTTAGTCAGTGGGATAGA+AGG - chr1_3:63356759-63356778 Msa0132370:intron 35.0%
! GATATTTGATTTCAGGGCAT+CGG + chr1_3:63356795-63356814 None:intergenic 35.0%
! CTAGTGCGATATTTGATTTC+AGG + chr1_3:63356802-63356821 None:intergenic 35.0%
TTATGAGTTCGTCAACAGAA+TGG + chr1_3:63356842-63356861 None:intergenic 35.0%
TTCTGTATTATGAAGCAGGA+AGG + chr1_3:63356894-63356913 None:intergenic 35.0%
CATAATACAGAAGAGGAAGT+TGG - chr1_3:63356902-63356921 Msa0132370:CDS 35.0%
TGAGGGATCTAAATTCCAAT+GGG + chr1_3:63357122-63357141 None:intergenic 35.0%
! TTTTACAAAGGATGCCACAA+GGG + chr1_3:63357421-63357440 None:intergenic 35.0%
! TTTTTACAAAGGATGCCACA+AGG + chr1_3:63357422-63357441 None:intergenic 35.0%
TGGCATCCTTTGTAAAAATC+AGG - chr1_3:63357424-63357443 Msa0132370:intron 35.0%
TATTTGTATTCTGCTTTCCC+TGG - chr1_3:63357633-63357652 Msa0132370:intron 35.0%
GTTAACTTAACTGGCATAAC+TGG - chr1_3:63357849-63357868 Msa0132370:intron 35.0%
TAGCAGTCTGTAGTTACAAT+TGG - chr1_3:63357902-63357921 Msa0132370:intron 35.0%
! TTATTTAAAACTGAAGGCCG+AGG - chr1_3:63358112-63358131 Msa0132370:intron 35.0%
! TATTTAAAACTGAAGGCCGA+GGG - chr1_3:63358113-63358132 Msa0132370:intron 35.0%
TTTGGCTGATGAGGAAATTA+AGG - chr1_3:63358144-63358163 Msa0132370:intron 35.0%
ATCATATACTGGGGAAATTC+AGG - chr1_3:63358169-63358188 Msa0132370:intron 35.0%
CAGTTTGTCATTGAATACTG+TGG - chr1_3:63358275-63358294 Msa0132370:CDS 35.0%
TCCCATACTTATGAAACTCA+AGG - chr1_3:63358332-63358351 Msa0132370:CDS 35.0%
GACCTTGAGTTTCATAAGTA+TGG + chr1_3:63358337-63358356 None:intergenic 35.0%
TCTATCGATGCAACTAGAAA+AGG - chr1_3:63358477-63358496 Msa0132370:intron 35.0%
TTTGTTTGAAGAGGTTTACC+AGG + chr1_3:63358529-63358548 None:intergenic 35.0%
TACAATACTTGCATATTGGC+AGG + chr1_3:63358576-63358595 None:intergenic 35.0%
GGTCTACAATACTTGCATAT+TGG + chr1_3:63358580-63358599 None:intergenic 35.0%
! TTCAGTTGATGTCAAACCTT+GGG + chr1_3:63358631-63358650 None:intergenic 35.0%
! ATTCAGTTGATGTCAAACCT+TGG + chr1_3:63358632-63358651 None:intergenic 35.0%
! CATTTTCTTGTCTCACAGTT+TGG + chr1_3:63358675-63358694 None:intergenic 35.0%
CAAACTGTGAGACAAGAAAA+TGG - chr1_3:63358673-63358692 Msa0132370:intron 35.0%
GACAAGAAAATGGAATGTCA+TGG - chr1_3:63358683-63358702 Msa0132370:intron 35.0%
CAAGAAAATGGAATGTCATG+GGG - chr1_3:63358685-63358704 Msa0132370:intron 35.0%
AAGAAAATGGAATGTCATGG+GGG - chr1_3:63358686-63358705 Msa0132370:intron 35.0%
AAGAGTTGGAATATTTGCAC+TGG - chr1_3:63358713-63358732 Msa0132370:intron 35.0%
TATTCCTATTGGAACTGAAC+TGG - chr1_3:63358740-63358759 Msa0132370:intron 35.0%
! CTCAAATGTTCTGAATTCCT+TGG - chr1_3:63358822-63358841 Msa0132370:intron 35.0%
ATCATGCCCATGCATTTAAA+AGG + chr1_3:63358953-63358972 None:intergenic 35.0%
ATCACCTTTCAAGCTATTAG+CGG + chr1_3:63359008-63359027 None:intergenic 35.0%
! TTCCTCGTGTTTGGAATAAT+CGG - chr1_3:63359298-63359317 Msa0132370:intron 35.0%
GTGCTGTATTCATCTCTAAA+AGG - chr1_3:63359385-63359404 Msa0132370:intron 35.0%
! TCGTTTTATCTGTTACTGAC+TGG - chr1_3:63359414-63359433 Msa0132370:intron 35.0%
TGCTAGGATCTCATCATTAT+GGG + chr1_3:63359478-63359497 None:intergenic 35.0%
ATAATGATGAGATCCTAGCA+CGG - chr1_3:63359478-63359497 Msa0132370:intron 35.0%
AAAACTAAGCACAAAAGTGG+GGG + chr1_3:63359527-63359546 None:intergenic 35.0%
!!! ATGGTTTTGGATAAAGAGGA+AGG + chr1_3:63359609-63359628 None:intergenic 35.0%
AGCTTTCAGTATAATAGCCA+TGG + chr1_3:63359832-63359851 None:intergenic 35.0%
TTGATCCCAATTGAATTCAG+TGG + chr1_3:63359891-63359910 None:intergenic 35.0%
CTGAATTCAATTGGGATCAA+TGG - chr1_3:63359891-63359910 Msa0132370:intron 35.0%
GAAAACTGAAATAGAAAGCG+AGG - chr1_3:63359932-63359951 Msa0132370:intron 35.0%
AAGATCCTGTTTGGTATCTT+GGG + chr1_3:63359973-63359992 None:intergenic 35.0%
! CTTTGATCTTTTGGTAGAGA+TGG + chr1_3:63360048-63360067 None:intergenic 35.0%
CATCTCTACCAAAAGATCAA+AGG - chr1_3:63360046-63360065 Msa0132370:intron 35.0%
TCTCTACCAAAAGATCAAAG+GGG - chr1_3:63360048-63360067 Msa0132370:intron 35.0%
! GGAGGAGATTTTAGATTATG+AGG - chr1_3:63360148-63360167 Msa0132370:intron 35.0%
TGGACTAAAACTTAGTTACC+TGG - chr1_3:63360246-63360265 Msa0132370:intron 35.0%
! TGTCATTTCATAGTACGATC+TGG - chr1_3:63360315-63360334 Msa0132370:intron 35.0%
ATGAGAACTGTCATGAATCA+CGG - chr1_3:63360473-63360492 Msa0132370:intron 35.0%
AAACGACAATGAAGCATGTA+CGG + chr1_3:63360514-63360533 None:intergenic 35.0%
! GTCATCTTTTCTTTTCTGCA+TGG + chr1_3:63360604-63360623 None:intergenic 35.0%
GAAAAGAAAAGATGACGCTA+CGG - chr1_3:63360608-63360627 Msa0132370:five_prime_UTR 35.0%
CACTCGATTGACATAAAGGA+AGG + chr1_3:63355839-63355858 None:intergenic 40.0%
TCGATTGAGACAGAGAGTAA+AGG - chr1_3:63355882-63355901 Msa0132370:CDS 40.0%
GGGATCTTTACCTAATGATG+CGG + chr1_3:63355974-63355993 None:intergenic 40.0%
TGAAGGAAGATTGGACAATG+GGG + chr1_3:63355994-63356013 None:intergenic 40.0%
ATTAGCTACGCGATTCTTAC+CGG + chr1_3:63356042-63356061 None:intergenic 40.0%
GCTGGTAGAGTTTGTATATG+TGG + chr1_3:63356095-63356114 None:intergenic 40.0%
CATATACAAACTCTACCAGC+CGG - chr1_3:63356095-63356114 Msa0132370:intron 40.0%
TGAATTAATCTCCCAGCTAG+TGG - chr1_3:63356158-63356177 Msa0132370:intron 40.0%
AGCACTGCGCAAGATTAATT+TGG + chr1_3:63356351-63356370 None:intergenic 40.0%
GTGTACTCTTACAAAAGCAG+AGG + chr1_3:63356416-63356435 None:intergenic 40.0%
ACTTTGTAAAGCTGTCCTGA+CGG + chr1_3:63356515-63356534 None:intergenic 40.0%
ACTAAAGATCCAGCATAAGC+GGG + chr1_3:63356572-63356591 None:intergenic 40.0%
CACTAAAGATCCAGCATAAG+CGG + chr1_3:63356573-63356592 None:intergenic 40.0%
!!! GTGGGATAGTTTTTAGTCAG+TGG - chr1_3:63356750-63356769 Msa0132370:intron 40.0%
GAATGGAATTGGAAGTGAAG+TGG + chr1_3:63356825-63356844 None:intergenic 40.0%
GTTCGTCAACAGAATGGAAT+TGG + chr1_3:63356836-63356855 None:intergenic 40.0%
! ACTAGATAACTTGTGACAGC+GGG + chr1_3:63356870-63356889 None:intergenic 40.0%
! CACTAGATAACTTGTGACAG+CGG + chr1_3:63356871-63356890 None:intergenic 40.0%
CCTCTTCTGTATTATGAAGC+AGG + chr1_3:63356898-63356917 None:intergenic 40.0%
CCTGCTTCATAATACAGAAG+AGG - chr1_3:63356895-63356914 Msa0132370:CDS 40.0%
! CAAATCAAAGGGTACAAGGT+TGG + chr1_3:63357008-63357027 None:intergenic 40.0%
CAACCTTGTACCCTTTGATT+TGG - chr1_3:63357006-63357025 Msa0132370:intron 40.0%
!! CTTGTACCCTTTGATTTGGA+GGG - chr1_3:63357010-63357029 Msa0132370:intron 40.0%
TTCCTACCCTCCAAATCAAA+GGG + chr1_3:63357019-63357038 None:intergenic 40.0%
TTTCCTACCCTCCAAATCAA+AGG + chr1_3:63357020-63357039 None:intergenic 40.0%
!! TTTGATTTGGAGGGTAGGAA+AGG - chr1_3:63357019-63357038 Msa0132370:intron 40.0%
GTGAGGGATCTAAATTCCAA+TGG + chr1_3:63357123-63357142 None:intergenic 40.0%
CTTTGAATTGGTGGAATTGG+TGG + chr1_3:63357145-63357164 None:intergenic 40.0%
CACCAATTCCACCAATTCAA+AGG - chr1_3:63357143-63357162 Msa0132370:CDS 40.0%
AGCCTTTGAATTGGTGGAAT+TGG + chr1_3:63357148-63357167 None:intergenic 40.0%
TTCCACCAATTCAAAGGCTA+TGG - chr1_3:63357149-63357168 Msa0132370:CDS 40.0%
ATAGGCCATAGCCTTTGAAT+TGG + chr1_3:63357157-63357176 None:intergenic 40.0%
AATTCAAAGGCTATGGCCTA+TGG - chr1_3:63357156-63357175 Msa0132370:CDS 40.0%
! CATTCGATTTTCCATTCCTC+TGG + chr1_3:63357195-63357214 None:intergenic 40.0%
ACTTCTCTTTATCTCTGTGC+AGG - chr1_3:63357267-63357286 Msa0132370:intron 40.0%
AAATCAGGTGAGTTCGTGTT+TGG - chr1_3:63357439-63357458 Msa0132370:intron 40.0%
AATCAGGTGAGTTCGTGTTT+GGG - chr1_3:63357440-63357459 Msa0132370:intron 40.0%
!! CTTTTTAACTACCAGCAGGA+TGG + chr1_3:63357505-63357524 None:intergenic 40.0%
!! CCAACTTTTTAACTACCAGC+AGG + chr1_3:63357509-63357528 None:intergenic 40.0%
CCTGCTGGTAGTTAAAAAGT+TGG - chr1_3:63357506-63357525 Msa0132370:intron 40.0%
ATTTCTGCAAGCATGAGACA+TGG + chr1_3:63358063-63358082 None:intergenic 40.0%
GGGAAATTCAGGCCTTAATA+TGG - chr1_3:63358180-63358199 Msa0132370:intron 40.0%
!! GTTTGCTTTTGCAGGTCTTA+AGG - chr1_3:63358422-63358441 Msa0132370:intron 40.0%
TTGAAGAGGTTTACCAGGAA+TGG + chr1_3:63358524-63358543 None:intergenic 40.0%
GCACTGGAAGATATTCCTAT+TGG - chr1_3:63358729-63358748 Msa0132370:intron 40.0%
TATGCCAGTTCAGTTCCAAT+AGG + chr1_3:63358747-63358766 None:intergenic 40.0%
! TAGCGGGTCTTAAAAACTCA+TGG + chr1_3:63358991-63359010 None:intergenic 40.0%
TCACCTTTCAAGCTATTAGC+GGG + chr1_3:63359007-63359026 None:intergenic 40.0%
GCTAATAGCTTGAAAGGTGA+TGG - chr1_3:63359007-63359026 Msa0132370:intron 40.0%
AGCAGGAGGATACTTATCTA+TGG - chr1_3:63359321-63359340 Msa0132370:intron 40.0%
GCAGGAGGATACTTATCTAT+GGG - chr1_3:63359322-63359341 Msa0132370:intron 40.0%
! TATGGGAAGATGATGATGAC+AGG - chr1_3:63359339-63359358 Msa0132370:intron 40.0%
ATCTCATCATTATGGGGTCT+TGG + chr1_3:63359471-63359490 None:intergenic 40.0%
GCTAGGATCTCATCATTATG+GGG + chr1_3:63359477-63359496 None:intergenic 40.0%
GTGCTAGGATCTCATCATTA+TGG + chr1_3:63359479-63359498 None:intergenic 40.0%
ACTGAAAGCTGAAGAACCAT+CGG - chr1_3:63359842-63359861 Msa0132370:intron 40.0%
! TTTAAAACAGTGGACTCCGA+TGG + chr1_3:63359861-63359880 None:intergenic 40.0%
TCAATTGGGATCAATGGCTT+AGG - chr1_3:63359897-63359916 Msa0132370:intron 40.0%
AAATAGAAAGCGAGGACATG+AGG - chr1_3:63359940-63359959 Msa0132370:intron 40.0%
GAAGATCCTGTTTGGTATCT+TGG + chr1_3:63359974-63359993 None:intergenic 40.0%
!! TTTTTGGGGAAGATCCTGTT+TGG + chr1_3:63359982-63360001 None:intergenic 40.0%
!!! CGCGATATCGCATTTTTTTG+GGG + chr1_3:63359996-63360015 None:intergenic 40.0%
!!! GCGCGATATCGCATTTTTTT+GGG + chr1_3:63359997-63360016 None:intergenic 40.0%
!!! TGCGCGATATCGCATTTTTT+TGG + chr1_3:63359998-63360017 None:intergenic 40.0%
CTCTACCAAAAGATCAAAGG+GGG - chr1_3:63360049-63360068 Msa0132370:intron 40.0%
TCTACCAAAAGATCAAAGGG+GGG - chr1_3:63360050-63360069 Msa0132370:intron 40.0%
ATTGATGCAAAGTATGCAGC+TGG - chr1_3:63360101-63360120 Msa0132370:intron 40.0%
GTGCTTCCTTTGATGCTAAA+AGG + chr1_3:63360127-63360146 None:intergenic 40.0%
! TTTAGCATCAAAGGAAGCAC+AGG - chr1_3:63360127-63360146 Msa0132370:intron 40.0%
TGACAGATGATGTGTGCATT+TGG + chr1_3:63360389-63360408 None:intergenic 40.0%
ATCCTTCTCGTGTTCTTCAA+TGG + chr1_3:63360670-63360689 None:intergenic 40.0%
TGTCGTAGATACACTGTCTT+GGG + chr1_3:63360694-63360713 None:intergenic 40.0%
! ATGTTGCTTGTACTCCTCAA+AGG - chr1_3:63360790-63360809 Msa0132370:five_prime_UTR 40.0%
! TGTTGCTTGTACTCCTCAAA+GGG - chr1_3:63360791-63360810 Msa0132370:five_prime_UTR 40.0%
! GTTGGTGAAAAAGGGAAGTG+AGG - chr1_3:63354835-63354854 Msa0132370:CDS 45.0%
AGAAGCGAGAAAAGGGGTTT+GGG + chr1_3:63354986-63355005 None:intergenic 45.0%
AGCTTGCAGAAGCGAGAAAA+GGG + chr1_3:63354993-63355012 None:intergenic 45.0%
AAGCTTGCAGAAGCGAGAAA+AGG + chr1_3:63354994-63355013 None:intergenic 45.0%
CACTCGGTAGCATTACTAAC+TGG - chr1_3:63355377-63355396 Msa0132370:intron 45.0%
TCTCTCTTATGGTAGGTTCC+AGG - chr1_3:63355533-63355552 Msa0132370:CDS 45.0%
GAAAATTATTGGACCGGACC+TGG + chr1_3:63355554-63355573 None:intergenic 45.0%
ACCACTGAATCCCTTGCTTT+CGG + chr1_3:63355686-63355705 None:intergenic 45.0%
! GATTCAGTGGTCTTACCCTT+GGG - chr1_3:63355695-63355714 Msa0132370:CDS 45.0%
CAGGCACTCGATTGACATAA+AGG + chr1_3:63355843-63355862 None:intergenic 45.0%
TAAACAGCTGAGTCCGAGAT+TGG - chr1_3:63355916-63355935 Msa0132370:intron 45.0%
AAACAGCTGAGTCCGAGATT+GGG - chr1_3:63355917-63355936 Msa0132370:intron 45.0%
! GCTAGTTCTTCTCCCAATCT+CGG + chr1_3:63355932-63355951 None:intergenic 45.0%
CTAATGATGCGGAGCGAATT+CGG + chr1_3:63355963-63355982 None:intergenic 45.0%
AAATTGATATATCCGCCGGC+TGG + chr1_3:63356113-63356132 None:intergenic 45.0%
TGCATAGCCCATGAGAATGA+TGG + chr1_3:63356543-63356562 None:intergenic 45.0%
TAAAGATCCAGCATAAGCGG+GGG + chr1_3:63356570-63356589 None:intergenic 45.0%
CTAAAGATCCAGCATAAGCG+GGG + chr1_3:63356571-63356590 None:intergenic 45.0%
TTAGTCAGTGGGATAGAAGG+TGG - chr1_3:63356762-63356781 Msa0132370:intron 45.0%
! CCTCCAAATCAAAGGGTACA+AGG + chr1_3:63357012-63357031 None:intergenic 45.0%
!! CCTTGTACCCTTTGATTTGG+AGG - chr1_3:63357009-63357028 Msa0132370:intron 45.0%
!! TACCCTTTGATTTGGAGGGT+AGG - chr1_3:63357014-63357033 Msa0132370:intron 45.0%
AGGTGGAGTGTGGAGTATAA+TGG - chr1_3:63357039-63357058 Msa0132370:intron 45.0%
!! TGGGCTGGTATTCCATTGTT+TGG + chr1_3:63357103-63357122 None:intergenic 45.0%
ACAATGGAATACCAGCCCAT+TGG - chr1_3:63357104-63357123 Msa0132370:intron 45.0%
GGATCTAAATTCCAATGGGC+TGG + chr1_3:63357118-63357137 None:intergenic 45.0%
!! ATTGGTGGAATTGGTGGTGA+GGG + chr1_3:63357139-63357158 None:intergenic 45.0%
!! AATTGGTGGAATTGGTGGTG+AGG + chr1_3:63357140-63357159 None:intergenic 45.0%
ATTTAGACACCCATCTCCAC+AGG + chr1_3:63357363-63357382 None:intergenic 45.0%
GCTTTAACCTGTGTCTCTGA+AGG - chr1_3:63357558-63357577 Msa0132370:CDS 45.0%
ATAAGTATGGGATCTGCGCT+TGG + chr1_3:63358324-63358343 None:intergenic 45.0%
! AGTTGATGTCAAACCTTGGG+CGG + chr1_3:63358628-63358647 None:intergenic 45.0%
GTCATGGGGGAAATAAGAGT+TGG - chr1_3:63358699-63358718 Msa0132370:intron 45.0%
! TGAATGGTTTGGAGGTGCAA+AGG - chr1_3:63358779-63358798 Msa0132370:intron 45.0%
TTCCTTGGAGCAAAATCTCG+TGG - chr1_3:63358837-63358856 Msa0132370:intron 45.0%
! AACCACGAGATTTTGCTCCA+AGG + chr1_3:63358842-63358861 None:intergenic 45.0%
AGACCCGCTAATAGCTTGAA+AGG - chr1_3:63359001-63359020 Msa0132370:intron 45.0%
! TAGCTTGAAAGGTGATGGCT+AGG - chr1_3:63359012-63359031 Msa0132370:intron 45.0%
CTACTCTTCTTCCTCGTGTT+TGG - chr1_3:63359289-63359308 Msa0132370:intron 45.0%
CTCCGATTATTCCAAACACG+AGG + chr1_3:63359303-63359322 None:intergenic 45.0%
! GTGTTTGGAATAATCGGAGC+AGG - chr1_3:63359304-63359323 Msa0132370:intron 45.0%
! TTTGGAATAATCGGAGCAGG+AGG - chr1_3:63359307-63359326 Msa0132370:intron 45.0%
TCATTATGGGGTCTTGGAGT+GGG + chr1_3:63359465-63359484 None:intergenic 45.0%
ATCATTATGGGGTCTTGGAG+TGG + chr1_3:63359466-63359485 None:intergenic 45.0%
TCCTTTATATGACTCTGCGG+AGG - chr1_3:63359767-63359786 Msa0132370:intron 45.0%
TCCTCCGCAGAGTCATATAA+AGG + chr1_3:63359771-63359790 None:intergenic 45.0%
TGGACAGAGTGAACAATCCA+TGG - chr1_3:63359812-63359831 Msa0132370:intron 45.0%
GTACTCCCAAGATACCAAAC+AGG - chr1_3:63359965-63359984 Msa0132370:intron 45.0%
ATTCGAAGTAACACTGCAGG+AGG - chr1_3:63360017-63360036 Msa0132370:intron 45.0%
! CTTTCCCCCCTTTGATCTTT+TGG + chr1_3:63360057-63360076 None:intergenic 45.0%
!!! AGCTGGCCTTTTAGCATCAA+AGG - chr1_3:63360118-63360137 Msa0132370:intron 45.0%
TTCTCGTGTTCTTCAATGGC+AGG + chr1_3:63360666-63360685 None:intergenic 45.0%
TGCCATTGAAGAACACGAGA+AGG - chr1_3:63360665-63360684 Msa0132370:five_prime_UTR 45.0%
CTGTCGTAGATACACTGTCT+TGG + chr1_3:63360695-63360714 None:intergenic 45.0%
AGTAGCAGAGAAGTGGATAC+AGG - chr1_3:63360713-63360732 Msa0132370:five_prime_UTR 45.0%
TTCCTGCCTAAAACTCAAGG+CGG - chr1_3:63360737-63360756 Msa0132370:five_prime_UTR 45.0%
! CAAACTCCGCCTTGAGTTTT+AGG + chr1_3:63360746-63360765 None:intergenic 45.0%
! TTCAGTACCTTTTGCTTGGC+CGG + chr1_3:63360820-63360839 None:intergenic 45.0%
! CGACTTCAGTACCTTTTGCT+TGG + chr1_3:63360824-63360843 None:intergenic 45.0%
!!! TATTATTATTATTATTTTGA+AGG - chr1_3:63355170-63355189 Msa0132370:intron 5.0%
CGTTGGTACTGTAGTGGTAG+CGG + chr1_3:63354867-63354886 None:intergenic 50.0%
AAGCGAGAAAAGGGGTTTGG+GGG + chr1_3:63354984-63355003 None:intergenic 50.0%
GAAGCGAGAAAAGGGGTTTG+GGG + chr1_3:63354985-63355004 None:intergenic 50.0%
CAGAAGCGAGAAAAGGGGTT+TGG + chr1_3:63354987-63355006 None:intergenic 50.0%
GCTTGCAGAAGCGAGAAAAG+GGG + chr1_3:63354992-63355011 None:intergenic 50.0%
GGCAAATCTTCAGCAGCATG+AGG + chr1_3:63355198-63355217 None:intergenic 50.0%
CTTATGGTAGGTTCCAGGTC+CGG - chr1_3:63355538-63355557 Msa0132370:CDS 50.0%
! GGATTCAGTGGTCTTACCCT+TGG - chr1_3:63355694-63355713 Msa0132370:CDS 50.0%
AGAAGAGAACCTACAAGGGC+CGG + chr1_3:63355721-63355740 None:intergenic 50.0%
GCCTGACTTCTCTATCTGAC+CGG - chr1_3:63355858-63355877 Msa0132370:CDS 50.0%
ACTCTCTGTCTCAATCGAGC+CGG + chr1_3:63355880-63355899 None:intergenic 50.0%
! CAGAGAGTAAAGGCGCGAAT+CGG - chr1_3:63355892-63355911 Msa0132370:CDS 50.0%
CGAATTCGCTCCGCATCATT+AGG - chr1_3:63355961-63355980 Msa0132370:intron 50.0%
ATACAAACTCTACCAGCCGG+CGG - chr1_3:63356098-63356117 Msa0132370:intron 50.0%
!!! ATTTTGGTTGCGAGGCGGAA+GGG + chr1_3:63356298-63356317 None:intergenic 50.0%
!!! TATTTTGGTTGCGAGGCGGA+AGG + chr1_3:63356299-63356318 None:intergenic 50.0%
ATACTCTTGCGAAGACCGTC+AGG - chr1_3:63356497-63356516 Msa0132370:intron 50.0%
AAAGATCCAGCATAAGCGGG+GGG + chr1_3:63356569-63356588 None:intergenic 50.0%
TATCCCACAAGGCCAGAAGT+CGG + chr1_3:63356738-63356757 None:intergenic 50.0%
GATTTGGAGGGTAGGAAAGG+TGG - chr1_3:63357022-63357041 Msa0132370:intron 50.0%
GGCCATAGCCTTTGAATTGG+TGG + chr1_3:63357154-63357173 None:intergenic 50.0%
AGGCTATGGCCTATGGTACA+AGG - chr1_3:63357163-63357182 Msa0132370:CDS 50.0%
! GATTTTCCATTCCTCTGGCC+TGG + chr1_3:63357190-63357209 None:intergenic 50.0%
GTGCAGGCATAAGAAGCAGA+AGG - chr1_3:63357283-63357302 Msa0132370:intron 50.0%
CAGGCATAAGAAGCAGAAGG+AGG - chr1_3:63357286-63357305 Msa0132370:intron 50.0%
GCATAAGAAGCAGAAGGAGG+AGG - chr1_3:63357289-63357308 Msa0132370:intron 50.0%
TGCCACAAGGGCAAAATCCA+GGG + chr1_3:63357409-63357428 None:intergenic 50.0%
ATGCCACAAGGGCAAAATCC+AGG + chr1_3:63357410-63357429 None:intergenic 50.0%
TCGCACTATAACCATCCTGC+TGG - chr1_3:63357491-63357510 Msa0132370:intron 50.0%
ACAAGTGCCTTCAGAGACAC+AGG + chr1_3:63357568-63357587 None:intergenic 50.0%
TTAAAACTGAAGGCCGAGGG+TGG - chr1_3:63358116-63358135 Msa0132370:intron 50.0%
TAAAACTGAAGGCCGAGGGT+GGG - chr1_3:63358117-63358136 Msa0132370:intron 50.0%
AACATTTGAGCGCACCACAG+AGG + chr1_3:63358812-63358831 None:intergenic 50.0%
CATTATGGGGTCTTGGAGTG+GGG + chr1_3:63359464-63359483 None:intergenic 50.0%
CAAGCACAAGTTTCCGTGCT+AGG + chr1_3:63359494-63359513 None:intergenic 50.0%
CGCATTCGAAGTAACACTGC+AGG - chr1_3:63360014-63360033 Msa0132370:intron 50.0%
! AGCATCAAAGGAAGCACAGG+AGG - chr1_3:63360130-63360149 Msa0132370:intron 50.0%
CTACGACAGTAGCAGAGAAG+TGG - chr1_3:63360706-63360725 Msa0132370:five_prime_UTR 50.0%
GGCTTCCTGCCTAAAACTCA+AGG - chr1_3:63360734-63360753 Msa0132370:five_prime_UTR 50.0%
! TCAGTACCTTTTGCTTGGCC+GGG + chr1_3:63360819-63360838 None:intergenic 50.0%
! GCGTTGCGTTGGTACTGTAG+TGG + chr1_3:63354873-63354892 None:intergenic 55.0%
CTTCTTGCGTTGCGTTGCGT+TGG + chr1_3:63354884-63354903 None:intergenic 55.0%
AGCGAGAAAAGGGGTTTGGG+GGG + chr1_3:63354983-63355002 None:intergenic 55.0%
! TTGTTGGTGGGCCGAAAGCA+AGG - chr1_3:63355672-63355691 Msa0132370:CDS 55.0%
! TGTTGGTGGGCCGAAAGCAA+GGG - chr1_3:63355673-63355692 Msa0132370:CDS 55.0%
GCCGAAAGCAAGGGATTCAG+TGG - chr1_3:63355682-63355701 Msa0132370:CDS 55.0%
! CTGTCTCTGTTGCTGCTTCC+CGG - chr1_3:63355784-63355803 Msa0132370:CDS 55.0%
GCCGGTCAGATAGAGAAGTC+AGG + chr1_3:63355862-63355881 None:intergenic 55.0%
GTGGTCGCCCAGTATGACAT+AGG + chr1_3:63356076-63356095 None:intergenic 55.0%
!! TCATCCGACTTCTGGCCTTG+TGG - chr1_3:63356731-63356750 Msa0132370:intron 55.0%
!! CATCCGACTTCTGGCCTTGT+GGG - chr1_3:63356732-63356751 Msa0132370:intron 55.0%
AGGGTAGGAAAGGTGGAGTG+TGG - chr1_3:63357029-63357048 Msa0132370:intron 55.0%
TGGCCTATGGTACAAGGACC+AGG - chr1_3:63357169-63357188 Msa0132370:CDS 55.0%
TGGCCTGGTCCTTGTACCAT+AGG + chr1_3:63357175-63357194 None:intergenic 55.0%
! ACCCCTGGATTTTGCCCTTG+TGG - chr1_3:63357404-63357423 Msa0132370:intron 55.0%
GCCACAAGGGCAAAATCCAG+GGG + chr1_3:63357408-63357427 None:intergenic 55.0%
AAAACTGAAGGCCGAGGGTG+GGG - chr1_3:63358118-63358137 Msa0132370:intron 55.0%
!! GTGGGGTCTTTTGGCTGATG+AGG - chr1_3:63358135-63358154 Msa0132370:intron 55.0%
AACCTTGGGCGGTGGGAAAT+AGG + chr1_3:63358617-63358636 None:intergenic 55.0%
GATGTCAAACCTTGGGCGGT+GGG + chr1_3:63358624-63358643 None:intergenic 55.0%
TGATGTCAAACCTTGGGCGG+TGG + chr1_3:63358625-63358644 None:intergenic 55.0%
!!! CTCCGCCTTGAGTTTTAGGC+AGG + chr1_3:63360742-63360761 None:intergenic 55.0%
!! TGTACTCCTCAAAGGGCACC+CGG - chr1_3:63360798-63360817 Msa0132370:five_prime_UTR 55.0%
GCGAGAAAAGGGGTTTGGGG+GGG + chr1_3:63354982-63355001 None:intergenic 60.0%
! CAGTGGTCTTACCCTTGGGC+CGG - chr1_3:63355699-63355718 Msa0132370:CDS 60.0%
GCATTTCCCCCCGCTTATGC+TGG - chr1_3:63356560-63356579 Msa0132370:intron 60.0%
TGGTACAAGGACCAGGCCAG+AGG - chr1_3:63357176-63357195 Msa0132370:CDS 60.0%
CAAGGACCAGGCCAGAGGAA+TGG - chr1_3:63357181-63357200 Msa0132370:CDS 60.0%
GATGATCCCGACAGTGCCTG+TGG - chr1_3:63357344-63357363 Msa0132370:CDS 60.0%
! CCATCTCCACAGGCACTGTC+GGG + chr1_3:63357353-63357372 None:intergenic 60.0%
! CCCATCTCCACAGGCACTGT+CGG + chr1_3:63357354-63357373 None:intergenic 60.0%
CCGACAGTGCCTGTGGAGAT+GGG - chr1_3:63357351-63357370 Msa0132370:CDS 60.0%
! ACCAGCACTGAATGCACCCC+TGG - chr1_3:63357389-63357408 Msa0132370:intron 60.0%
! TCCAGGGGTGCATTCAGTGC+TGG + chr1_3:63357393-63357412 None:intergenic 60.0%
CAGCCAAAAGACCCCACCCT+CGG + chr1_3:63358132-63358151 None:intergenic 60.0%
CTTGGGCGGTGGGAAATAGG+AGG + chr1_3:63358614-63358633 None:intergenic 60.0%
CTCCTATTTCCCACCGCCCA+AGG - chr1_3:63358612-63358631 Msa0132370:intron 60.0%
GCAAAGGTTCGCTGCCTCTG+TGG - chr1_3:63358795-63358814 Msa0132370:intron 60.0%
ATGGGGTCTTGGAGTGGGGA+AGG + chr1_3:63359460-63359479 None:intergenic 60.0%
ACCTACAAGGGCCGGCCCAA+GGG + chr1_3:63355713-63355732 None:intergenic 65.0%
AACCTACAAGGGCCGGCCCA+AGG + chr1_3:63355714-63355733 None:intergenic 65.0%
CCCGACAGTGCCTGTGGAGA+TGG - chr1_3:63357350-63357369 Msa0132370:CDS 65.0%
! AGGCCGAGGGTGGGGTCTTT+TGG - chr1_3:63358126-63358145 Msa0132370:intron 65.0%
! AGGGCACCCGGCCAAGCAAA+AGG - chr1_3:63360810-63360829 Msa0132370:five_prime_UTR 65.0%
ACCCTTGGGCCGGCCCTTGT+AGG - chr1_3:63355709-63355728 Msa0132370:CDS 70.0%
GCTTGGCCGGGTGCCCTTTG+AGG + chr1_3:63360807-63360826 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 63354794 63360878 63354794 ID=Msa0132370;Name=Msa0132370
chr1_3 mRNA 63354794 63360878 63354794 ID=Msa0132370-mRNA-1;Parent=Msa0132370;Name=Msa0132370-mRNA-1;_AED=0.18;_eAED=0.18;_QI=278|1|1|1|1|1|10|0|473
chr1_3 exon 63354794 63355063 63354794 ID=Msa0132370-mRNA-1:exon:21231;Parent=Msa0132370-mRNA-1
chr1_3 exon 63355503 63355923 63355503 ID=Msa0132370-mRNA-1:exon:21230;Parent=Msa0132370-mRNA-1
chr1_3 exon 63356312 63356346 63356312 ID=Msa0132370-mRNA-1:exon:21229;Parent=Msa0132370-mRNA-1
chr1_3 exon 63356806 63357004 63356806 ID=Msa0132370-mRNA-1:exon:21228;Parent=Msa0132370-mRNA-1
chr1_3 exon 63357143 63357236 63357143 ID=Msa0132370-mRNA-1:exon:21227;Parent=Msa0132370-mRNA-1
chr1_3 exon 63357319 63357403 63357319 ID=Msa0132370-mRNA-1:exon:21226;Parent=Msa0132370-mRNA-1
chr1_3 exon 63357507 63357593 63357507 ID=Msa0132370-mRNA-1:exon:21225;Parent=Msa0132370-mRNA-1
chr1_3 exon 63358227 63358383 63358227 ID=Msa0132370-mRNA-1:exon:21224;Parent=Msa0132370-mRNA-1
chr1_3 exon 63360413 63360480 63360413 ID=Msa0132370-mRNA-1:exon:21223;Parent=Msa0132370-mRNA-1
chr1_3 exon 63360598 63360878 63360598 ID=Msa0132370-mRNA-1:exon:21222;Parent=Msa0132370-mRNA-1
chr1_3 five_prime_UTR 63360601 63360878 63360601 ID=Msa0132370-mRNA-1:five_prime_utr;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63360598 63360600 63360598 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63360413 63360480 63360413 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63358227 63358383 63358227 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63357507 63357593 63357507 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63357319 63357403 63357319 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63357143 63357236 63357143 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63356806 63357004 63356806 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63356312 63356346 63356312 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63355503 63355923 63355503 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
chr1_3 CDS 63354794 63355063 63354794 ID=Msa0132370-mRNA-1:cds;Parent=Msa0132370-mRNA-1
Gene Sequence

>Msa0132370

ATGGAACCTCATGCTGCTGAAGATTTGCCTCAATACATTCATATCAATCAAAATGATTTTTTTATGCGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGCAGGTATGATGAAGATGATCCCGACAGTGCCTGTGGAGATGGGTGTCTAAATGTATTGACCAGCACTGAATGCACCCCTGGATTTTGCCCTTGTGGCATCCTTTGTAAAAATCAGAAATTTCAGAAATGTGAATATGCAAAAACCAAGTTATTTAAAACTGAAGGCCGAGGGTGGGGTCTTTTGGCTGATGAGGAAATTAAGGCAGGACAGTTTGTCATTGAATACTGTGGAGAAGTAATATCATGCAAAGAAGCCAAGCGCAGATCCCATACTTATGAAACTCAAGGTCTTAAGGATGCATTTATCATTTCTCTTAATGCGTCTGAATCTATCGATGCAACTAGAAAAGGAAGCCTTGCAAGATTTATAAACCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCATGGGGGAAATAAGAGTTGGAATATTTGCACTGGAAGATATTCCTATTGGAACTGAACTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCCTCTGTGGTGCGCTCAAATGTTCTGAATTCCTTGGAGCAAAATCTCGTGGTTTTCAAGAGGATACTTATCTATGGGAAGATGATGATGACAGATACTCAATTGAGAAAATTCCTTTATATGACTCTGCGGAGGATGAACTCACGTCAAATGTTGGTGGACAGAGTGAACAATCCATGGCTATTATACTGAAAGCTGAAGAACCATCGGAGTCCACTGTTTTAAATATTCAACCACTGAATTCAATTGGGATCAATGGCTTAGGTATTCAGAAAATGAAAACTGAAATAGAAAGCGAGGACATGAGGTTGTACTCCCAAGATACCAAACAGGATCTTCCCCAAAAAAATGCGATATCGCGCATTCGAAGTAACACTGCAGGAGGAAAGTCCATCTCTACCAAAAGATCAAAGGGGGGAAAGCTTAAAAATCGCATACAGAAGAAAATTGATGCAAAGTATGCAGCTGGCCTTTTAGCATCAAAGGAAGCACAGGAGGAGATTTTAGATTATGAGAAAAGAAAAGATGACGCTACGGAAGCCCTTGATTCTTTATACAATGAAATACGGCCTGCCATTGAAGAACACGAGAAGGATACCCAAGACAGTGTATCTACGACAGTAGCAGAGAAGTGGATACAGGCTTCCTGCCTAAAACTCAAGGCGGAGTTTGATCTTTACTCGTCAATTATTAAAAATGTTGCTTGTACTCCTCAAAGGGCACCCGGCCAAGCAAAAGGTACTGAAGTCGATAACGAAGACAAAATGAAGCTTTTGACGTTCTCG
Protein sequence

>Msa0132370

MEPHAAEDLPQYIHINQNDFFMRRHKKQKEEDIAICECRYDEDDPDSACGDGCLNVLTSTECTPGFCPCGILCKNQKFQKCEYAKTKLFKTEGRGWGLLADEEIKAGQFVIEYCGEVISCKEAKRRSHTYETQGLKDAFIISLNASESIDATRKGSLARFINHSCQPNCETRKWNVMGEIRVGIFALEDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSEFLGAKSRGFQEDTYLWEDDDDRYSIEKIPLYDSAEDELTSNVGGQSEQSMAIILKAEEPSESTVLNIQPLNSIGINGLGIQKMKTEIESEDMRLYSQDTKQDLPQKNAISRIRSNTAGGKSISTKRSKGGKLKNRIQKKIDAKYAAGLLASKEAQEEILDYEKRKDDATEALDSLYNEIRPAIEEHEKDTQDSVSTTVAEKWIQASCLKLKAEFDLYSSIIKNVACTPQRAPGQAKGTEVDNEDKMKLLTFS