Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133030 | G7KX87 | 60.449 | 445 | 139 | 14 | 1 | 421 | 1 | 432 | 7.83e-164 | 477 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0133030 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133030 | MtrunA17_Chr7g0252101 | 60.449 | 445 | 139 | 14 | 1 | 421 | 1 | 432 | 1.51e-167 | 477 |
| Msa0133030 | MtrunA17_Chr3g0093911 | 68.169 | 355 | 99 | 9 | 76 | 421 | 1 | 350 | 1.26e-156 | 446 |
| Msa0133030 | MtrunA17_Chr1g0207351 | 67.606 | 355 | 98 | 9 | 80 | 421 | 16 | 366 | 1.06e-152 | 436 |
| Msa0133030 | MtrunA17_Chr4g0075971 | 57.611 | 427 | 160 | 10 | 8 | 421 | 184 | 602 | 4.56e-149 | 436 |
| Msa0133030 | MtrunA17_Chr6g0488101 | 50.353 | 425 | 174 | 10 | 25 | 421 | 40 | 455 | 1.48e-130 | 384 |
| Msa0133030 | MtrunA17_Chr6g0488271 | 50.236 | 424 | 174 | 10 | 26 | 421 | 1 | 415 | 2.76e-130 | 381 |
| Msa0133030 | MtrunA17_Chr3g0077801 | 57.507 | 353 | 136 | 6 | 76 | 418 | 1 | 349 | 1.27e-129 | 377 |
| Msa0133030 | MtrunA17_Chr3g0077901 | 56.303 | 357 | 146 | 5 | 72 | 420 | 17 | 371 | 1.77e-125 | 367 |
| Msa0133030 | MtrunA17_Chr3g0077851 | 56.548 | 336 | 136 | 5 | 93 | 420 | 2 | 335 | 4.60e-118 | 347 |
| Msa0133030 | MtrunA17_Chr1g0209051 | 66.418 | 268 | 81 | 5 | 161 | 420 | 4 | 270 | 7.13e-116 | 339 |
| Msa0133030 | MtrunA17_Chr7g0243331 | 55.747 | 348 | 144 | 7 | 81 | 421 | 6 | 350 | 5.98e-114 | 337 |
| Msa0133030 | MtrunA17_Chr3g0112311 | 53.463 | 361 | 145 | 9 | 76 | 419 | 1 | 355 | 1.21e-111 | 332 |
| Msa0133030 | MtrunA17_Chr6g0452641 | 50.456 | 329 | 137 | 7 | 113 | 421 | 18 | 340 | 1.69e-87 | 269 |
| Msa0133030 | MtrunA17_Chr3g0122991 | 46.462 | 325 | 108 | 6 | 78 | 388 | 2 | 274 | 4.92e-82 | 253 |
| Msa0133030 | MtrunA17_Chr3g0123471 | 52.830 | 265 | 109 | 7 | 158 | 413 | 2 | 259 | 1.19e-76 | 239 |
| Msa0133030 | MtrunA17_Chr1g0202841 | 66.111 | 180 | 50 | 6 | 252 | 421 | 1 | 179 | 7.75e-69 | 216 |
| Msa0133030 | MtrunA17_Chr7g0243391 | 49.074 | 216 | 106 | 3 | 72 | 287 | 14 | 225 | 4.89e-57 | 187 |
| Msa0133030 | MtrunA17_Chr4g0075861 | 56.452 | 186 | 73 | 3 | 18 | 197 | 190 | 373 | 2.70e-54 | 184 |
| Msa0133030 | MtrunA17_Chr1g0196231 | 64.189 | 148 | 47 | 4 | 73 | 219 | 224 | 366 | 2.76e-49 | 171 |
| Msa0133030 | MtrunA17_Chr1g0187941 | 62.222 | 135 | 44 | 3 | 255 | 382 | 3 | 137 | 1.32e-44 | 151 |
| Msa0133030 | MtrunA17_Chr6g0486591 | 51.250 | 160 | 59 | 5 | 280 | 421 | 1 | 159 | 9.07e-42 | 145 |
| Msa0133030 | MtrunA17_Chr1g0206951 | 56.800 | 125 | 52 | 2 | 79 | 202 | 2 | 125 | 4.48e-38 | 134 |
| Msa0133030 | MtrunA17_Chr1g0209191 | 65.306 | 98 | 24 | 2 | 333 | 420 | 1 | 98 | 1.45e-35 | 126 |
| Msa0133030 | MtrunA17_Chr1g0196241 | 73.864 | 88 | 19 | 2 | 322 | 405 | 1 | 88 | 2.98e-34 | 122 |
| Msa0133030 | MtrunA17_Chr1g0209061 | 50.794 | 126 | 32 | 5 | 1 | 115 | 1 | 107 | 5.82e-28 | 106 |
| Msa0133030 | MtrunA17_Chr6g0459061 | 26.844 | 339 | 214 | 10 | 84 | 406 | 18 | 338 | 1.04e-24 | 104 |
| Msa0133030 | MtrunA17_Chr7g0238781 | 41.176 | 136 | 75 | 3 | 108 | 242 | 27 | 158 | 3.64e-24 | 98.2 |
| Msa0133030 | MtrunA17_Chr1g0209201 | 48.387 | 62 | 28 | 1 | 11 | 68 | 22 | 83 | 3.69e-12 | 63.9 |
| Msa0133030 | MtrunA17_Chr5g0415031 | 53.030 | 66 | 28 | 1 | 18 | 80 | 61 | 126 | 1.09e-11 | 67.0 |
| Msa0133030 | MtrunA17_Chr8g0364231 | 39.252 | 107 | 50 | 2 | 18 | 124 | 60 | 151 | 1.76e-11 | 66.6 |
| Msa0133030 | MtrunA17_Chr1g0206781 | 58.000 | 50 | 21 | 0 | 18 | 67 | 29 | 78 | 1.88e-11 | 61.2 |
| Msa0133030 | MtrunA17_Chr6g0452001 | 50.725 | 69 | 29 | 1 | 18 | 81 | 81 | 149 | 8.63e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0133030 | AT3G01320.1 | 46.667 | 75 | 31 | 1 | 18 | 92 | 75 | 140 | 5.22e-11 | 65.5 |
| Msa0133030 | AT3G01320.2 | 46.667 | 75 | 31 | 1 | 18 | 92 | 75 | 140 | 5.26e-11 | 65.5 |
Find 100 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTCTTTATTCTTGTAAA+TGG | 0.131332 | 1_3:-64282941 | None:intergenic |
| CTCTCATATCCCCATGTATT+TGG | 0.140710 | 1_3:-64283454 | None:intergenic |
| TATGAAATTTGAAGAATTAA+TGG | 0.141021 | 1_3:-64282761 | None:intergenic |
| TCCTACTCCGGTCAAATTAT+TGG | 0.176650 | 1_3:-64283696 | None:intergenic |
| CCTTTATGTAGTGTTTATTC+AGG | 0.216363 | 1_3:+64283502 | Msa0133030:CDS |
| CTACCTCGTCATGGTAGTTC+TGG | 0.247589 | 1_3:-64281005 | None:intergenic |
| CACCTCTTGTATAAATTCTT+TGG | 0.253899 | 1_3:-64281083 | None:intergenic |
| TTTGAAGAATTAATGGTTCT+TGG | 0.256322 | 1_3:-64282754 | None:intergenic |
| CAAATTATTGGCAAACAAAA+AGG | 0.284650 | 1_3:-64283684 | None:intergenic |
| CAAAGCTTCCATTCAGAATC+AGG | 0.295378 | 1_3:+64280813 | Msa0133030:five_prime_UTR |
| CTCTAGTTTGACATAATTCA+TGG | 0.303116 | 1_3:-64283371 | None:intergenic |
| GGGGAGGGTTGTTGACTTTG+TGG | 0.307332 | 1_3:+64283144 | Msa0133030:CDS |
| TCTCATATCCCCATGTATTT+GGG | 0.324513 | 1_3:-64283453 | None:intergenic |
| GGGCATACTCATTTAACTTT+GGG | 0.329582 | 1_3:+64281135 | Msa0133030:CDS |
| TGGATTACTTATTCGACAAT+TGG | 0.356713 | 1_3:+64283112 | Msa0133030:CDS |
| GGTCGTCAAGATCTAGTGTT+TGG | 0.362554 | 1_3:-64282658 | None:intergenic |
| TTGAAGAATTAATGGTTCTT+GGG | 0.369399 | 1_3:-64282753 | None:intergenic |
| CACCACAGAGGGATTAAGAT+TGG | 0.384983 | 1_3:-64280840 | None:intergenic |
| GAAGATAAAGAATTACTTCA+AGG | 0.393623 | 1_3:+64282844 | Msa0133030:CDS |
| AGAGAACCGTGAACTTCCTT+TGG | 0.394473 | 1_3:+64282616 | Msa0133030:CDS |
| AGTTTGATTTGATGTTCCTT+TGG | 0.399942 | 1_3:-64281174 | None:intergenic |
| CAAGTTCCTTCATGTTGGAT+TGG | 0.401543 | 1_3:+64283572 | Msa0133030:CDS |
| ACACACCGGCAAATTGAAAA+AGG | 0.404330 | 1_3:-64282679 | None:intergenic |
| AGGGCATACTCATTTAACTT+TGG | 0.412341 | 1_3:+64281134 | Msa0133030:CDS |
| TTGCCGGTGTGTGCAAGAAT+TGG | 0.418875 | 1_3:+64282690 | Msa0133030:CDS |
| TACCTCGTCATGGTAGTTCT+GGG | 0.420987 | 1_3:-64281004 | None:intergenic |
| TTATGTCAAACTAGAGACTT+TGG | 0.424173 | 1_3:+64283378 | Msa0133030:CDS |
| TTCGACAATTGGAAATGAAA+GGG | 0.426784 | 1_3:+64283123 | Msa0133030:CDS |
| ATTTAAGGTTCGGCGAAGTA+AGG | 0.437676 | 1_3:+64283323 | Msa0133030:CDS |
| CCTGAATAAACACTACATAA+AGG | 0.437679 | 1_3:-64283502 | None:intergenic |
| AAAAGTCCTAAAAGATATCA+AGG | 0.441741 | 1_3:+64281059 | Msa0133030:CDS |
| CTCCGAGGAATTTATCTTGG+TGG | 0.442445 | 1_3:+64283036 | Msa0133030:CDS |
| TGATTTGATGTTCCTTTGGC+AGG | 0.443659 | 1_3:-64281170 | None:intergenic |
| TTAGTGGTTGATTTAAGGTT+CGG | 0.445677 | 1_3:+64283313 | Msa0133030:CDS |
| ACACTCCGAGGAATTTATCT+TGG | 0.462983 | 1_3:+64283033 | Msa0133030:CDS |
| ATGATAAGACTCGGCTTCAA+AGG | 0.465521 | 1_3:-64282978 | None:intergenic |
| AAGGAACTTGCTCCTTGAGT+TGG | 0.466623 | 1_3:-64283559 | None:intergenic |
| TTGTTTGCCAATAATTTGAC+CGG | 0.476117 | 1_3:+64283689 | Msa0133030:three_prime_UTR |
| ACCACAGAGGGATTAAGATT+GGG | 0.481823 | 1_3:-64280839 | None:intergenic |
| GACGAGGAGCATACCATTGT+AGG | 0.482341 | 1_3:-64280886 | None:intergenic |
| CATTGAGCAACCCAAATACA+TGG | 0.487986 | 1_3:+64283443 | Msa0133030:CDS |
| CTTTATGTAGTGTTTATTCA+GGG | 0.488519 | 1_3:+64283503 | Msa0133030:CDS |
| ATTCGACAATTGGAAATGAA+AGG | 0.488722 | 1_3:+64283122 | Msa0133030:CDS |
| TGATAAGACTCGGCTTCAAA+GGG | 0.489177 | 1_3:-64282977 | None:intergenic |
| TATGTCAAACTAGAGACTTT+GGG | 0.491957 | 1_3:+64283379 | Msa0133030:CDS |
| GTCGTCAAGATCTAGTGTTT+GGG | 0.494463 | 1_3:-64282657 | None:intergenic |
| TCCATTTACAAGAATAAAGA+AGG | 0.500617 | 1_3:+64282940 | Msa0133030:CDS |
| ATCAATCTCGAAATTGTGGT+TGG | 0.504810 | 1_3:+64283092 | Msa0133030:CDS |
| AGGAGCAAGTTCCTTCATGT+TGG | 0.509044 | 1_3:+64283567 | Msa0133030:CDS |
| AGAGTCAAGGAGCTGCTTGA+AGG | 0.509677 | 1_3:+64281114 | Msa0133030:CDS |
| GCATACCATTGTAGGCTGGC+AGG | 0.512357 | 1_3:-64280878 | None:intergenic |
| TTGGTCGGGTAGGCTAATCA+AGG | 0.512881 | 1_3:-64282804 | None:intergenic |
| AAGTACCCCTATGTTGGCCT+TGG | 0.518606 | 1_3:-64283197 | None:intergenic |
| GTCTATCAATCTCGAAATTG+TGG | 0.522717 | 1_3:+64283088 | Msa0133030:CDS |
| CATCACAATTAACTAACCTA+CGG | 0.525491 | 1_3:-64283282 | None:intergenic |
| GCCAATAATTTGACCGGAGT+AGG | 0.531718 | 1_3:+64283695 | Msa0133030:three_prime_UTR |
| TTGATTACGCTTCCAACTCA+AGG | 0.533033 | 1_3:+64283547 | Msa0133030:CDS |
| GAGTCAAGGAGCTGCTTGAA+GGG | 0.541631 | 1_3:+64281115 | Msa0133030:CDS |
| ATCACAATTAACTAACCTAC+GGG | 0.544594 | 1_3:-64283281 | None:intergenic |
| TTGGGAACCCTGATTCTGAA+TGG | 0.544815 | 1_3:-64280821 | None:intergenic |
| TTGATGTTCCTTTGGCAGGA+AGG | 0.546048 | 1_3:-64281166 | None:intergenic |
| GTCACTACCAAGGCCAACAT+AGG | 0.547612 | 1_3:+64283190 | Msa0133030:CDS |
| TCACTACCAAGGCCAACATA+GGG | 0.550648 | 1_3:+64283191 | Msa0133030:CDS |
| AGGTGTTGCGGCAAGAGTCA+AGG | 0.556345 | 1_3:+64281101 | Msa0133030:CDS |
| AACCACCAAGATAAATTCCT+CGG | 0.558702 | 1_3:-64283038 | None:intergenic |
| GCACATCCAAAGGAAGTTCA+CGG | 0.562215 | 1_3:-64282622 | None:intergenic |
| CAAATCAAACTTGAGACCAC+TGG | 0.570634 | 1_3:+64281186 | Msa0133030:CDS |
| AAAATATCCGCTAGAAGATG+TGG | 0.571308 | 1_3:-64282879 | None:intergenic |
| ACCTCGTCATGGTAGTTCTG+GGG | 0.577587 | 1_3:-64281003 | None:intergenic |
| CAAGCTAAGTACCCCTATGT+TGG | 0.578655 | 1_3:-64283203 | None:intergenic |
| AATTTATACAAGAGGTGTTG+CGG | 0.578757 | 1_3:+64281089 | Msa0133030:CDS |
| TCGACAATTGGAAATGAAAG+GGG | 0.582041 | 1_3:+64283124 | Msa0133030:CDS |
| GCAACACTGTTACTTGTGGT+CGG | 0.582308 | 1_3:+64283646 | Msa0133030:three_prime_UTR |
| TTTATGTAGTGTTTATTCAG+GGG | 0.586406 | 1_3:+64283504 | Msa0133030:CDS |
| GTGTTTGTCAAAAGCAAGCA+AGG | 0.595983 | 1_3:-64283014 | None:intergenic |
| AAAGCTTCCATTCAGAATCA+GGG | 0.596310 | 1_3:+64280814 | Msa0133030:five_prime_UTR |
| GACCAAAGAATTTATACAAG+AGG | 0.598738 | 1_3:+64281081 | Msa0133030:CDS |
| AAAACACCAATCCAACATGA+AGG | 0.599108 | 1_3:-64283578 | None:intergenic |
| AGGAGCATACCATTGTAGGC+TGG | 0.600560 | 1_3:-64280882 | None:intergenic |
| ATGAAATCAAGCACATCCAA+AGG | 0.603338 | 1_3:-64282632 | None:intergenic |
| TGTCAAAAGCAAGCAAGGCA+CGG | 0.606836 | 1_3:-64283009 | None:intergenic |
| TCTGTACAGTTCACCACAGA+GGG | 0.609785 | 1_3:-64280851 | None:intergenic |
| ATCAGCCTGCCAGCCTACAA+TGG | 0.610723 | 1_3:+64280873 | Msa0133030:exon |
| CCTCGTCATGGTAGTTCTGG+GGG | 0.617059 | 1_3:-64281002 | None:intergenic |
| ATCTATGCCACATCTTCTAG+CGG | 0.618471 | 1_3:+64282872 | Msa0133030:CDS |
| ATTCAACACCTTCCTGCCAA+AGG | 0.618562 | 1_3:+64281158 | Msa0133030:CDS |
| GGAGTAGGAAAAGCTTGCAA+TGG | 0.620832 | 1_3:+64283710 | Msa0133030:three_prime_UTR |
| CGGTGTGTGCAAGAATTGGA+AGG | 0.623153 | 1_3:+64282694 | Msa0133030:CDS |
| CTTCCAATTCTTGCACACAC+CGG | 0.626272 | 1_3:-64282693 | None:intergenic |
| TCCCAATCTTAATCCCTCTG+TGG | 0.631619 | 1_3:+64280838 | Msa0133030:five_prime_UTR |
| ATTGAGCAACCCAAATACAT+GGG | 0.642942 | 1_3:+64283444 | Msa0133030:CDS |
| ATTTGCAACACTGTTACTTG+TGG | 0.646929 | 1_3:+64283642 | Msa0133030:exon |
| AATATATGTTGTCACTACCA+AGG | 0.650134 | 1_3:+64283180 | Msa0133030:CDS |
| CACTACCAAGGCCAACATAG+GGG | 0.661007 | 1_3:+64283192 | Msa0133030:CDS |
| CAGCTTGTACTACCTCGTCA+TGG | 0.666702 | 1_3:-64281014 | None:intergenic |
| CGACAATTGGAAATGAAAGG+GGG | 0.685178 | 1_3:+64283125 | Msa0133030:CDS |
| TTGAGCAACCCAAATACATG+GGG | 0.696890 | 1_3:+64283445 | Msa0133030:CDS |
| GTTACTATAATGATAAGACT+CGG | 0.702681 | 1_3:-64282987 | None:intergenic |
| ATCTGTACAGTTCACCACAG+AGG | 0.703202 | 1_3:-64280852 | None:intergenic |
| GATAAGACTCGGCTTCAAAG+GGG | 0.717149 | 1_3:-64282976 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTCAGAAATAAATAAAA+AGG | + | chr1_3:64282525-64282544 | Msa0133030:intron | 10.0% |
| !!! | GTTTTATTATTCTGAATTAT+TGG | + | chr1_3:64280934-64280953 | Msa0133030:intron | 15.0% |
| !! | TACTATTAAAACTGAAAATT+TGG | - | chr1_3:64281637-64281656 | None:intergenic | 15.0% |
| !!! | TTTTCATTTTTCTTTTTGTT+GGG | + | chr1_3:64282240-64282259 | Msa0133030:intron | 15.0% |
| !! | TATGAAATTTGAAGAATTAA+TGG | - | chr1_3:64282764-64282783 | None:intergenic | 15.0% |
| !!! | AATTTTGCACAATTAATTGA+TGG | + | chr1_3:64281317-64281336 | Msa0133030:intron | 20.0% |
| !!! | TAGTATCTTTTATTGATTCT+CGG | + | chr1_3:64281700-64281719 | Msa0133030:intron | 20.0% |
| !! | AACTTCACAGATTAAAAAAA+TGG | + | chr1_3:64281811-64281830 | Msa0133030:intron | 20.0% |
| !! | ACTTCACAGATTAAAAAAAT+GGG | + | chr1_3:64281812-64281831 | Msa0133030:intron | 20.0% |
| !! | CAACAAAAAGAAAAATGAAA+AGG | - | chr1_3:64282241-64282260 | None:intergenic | 20.0% |
| !!! | CTTTTCATTTTTCTTTTTGT+TGG | + | chr1_3:64282239-64282258 | Msa0133030:intron | 20.0% |
| !!! | TTTCATTTTTCTTTTTGTTG+GGG | + | chr1_3:64282241-64282260 | Msa0133030:intron | 20.0% |
| !! | TGATAATATCATAGAAAATG+AGG | - | chr1_3:64282488-64282507 | None:intergenic | 20.0% |
| !! | AATTTACTGGAAAAATTTCT+TGG | + | chr1_3:64282727-64282746 | Msa0133030:CDS | 20.0% |
| !!! | TCAAGCAATAATAAACTTTT+TGG | - | chr1_3:64282826-64282845 | None:intergenic | 20.0% |
| !!! | TTTGTTTGTTTTTTGAAACA+AGG | + | chr1_3:64283775-64283794 | Msa0133030:three_prime_UTR | 20.0% |
| ! | AAAAGTCCTAAAAGATATCA+AGG | + | chr1_3:64281059-64281078 | Msa0133030:CDS | 25.0% |
| ! | AATGATAAATTACTAACCAG+TGG | - | chr1_3:64281205-64281224 | None:intergenic | 25.0% |
| !! | AATTGATGATAGAATACTGA+TGG | + | chr1_3:64281378-64281397 | Msa0133030:intron | 25.0% |
| !! | ATTGATGATAGAATACTGAT+GGG | + | chr1_3:64281379-64281398 | Msa0133030:intron | 25.0% |
| ! | AACATAAGTCAAGATAACAA+GGG | - | chr1_3:64281490-64281509 | None:intergenic | 25.0% |
| ! | AAACATAAGTCAAGATAACA+AGG | - | chr1_3:64281491-64281510 | None:intergenic | 25.0% |
| ! | AAAAAAAAAATCAAGCTCAG+CGG | - | chr1_3:64282083-64282102 | None:intergenic | 25.0% |
| ! | ATGAAAAGGATTAAAGACAT+AGG | - | chr1_3:64282227-64282246 | None:intergenic | 25.0% |
| !! | AAAGCATTAAATATTAGACG+TGG | - | chr1_3:64282286-64282305 | None:intergenic | 25.0% |
| ! | ATCACAACAATGACAAAATT+AGG | - | chr1_3:64282568-64282587 | None:intergenic | 25.0% |
| ! | TTGAAGAATTAATGGTTCTT+GGG | - | chr1_3:64282756-64282775 | None:intergenic | 25.0% |
| ! | TTTGAAGAATTAATGGTTCT+TGG | - | chr1_3:64282757-64282776 | None:intergenic | 25.0% |
| !!! | CAATAATAAACTTTTTGGTC+GGG | - | chr1_3:64282821-64282840 | None:intergenic | 25.0% |
| !!! | GCAATAATAAACTTTTTGGT+CGG | - | chr1_3:64282822-64282841 | None:intergenic | 25.0% |
| ! | GAAGATAAAGAATTACTTCA+AGG | + | chr1_3:64282844-64282863 | Msa0133030:CDS | 25.0% |
| ! | TCCATTTACAAGAATAAAGA+AGG | + | chr1_3:64282940-64282959 | Msa0133030:CDS | 25.0% |
| ! | ACCTTCTTTATTCTTGTAAA+TGG | - | chr1_3:64282944-64282963 | None:intergenic | 25.0% |
| ! | GTTACTATAATGATAAGACT+CGG | - | chr1_3:64282990-64283009 | None:intergenic | 25.0% |
| !!! | AACTTTTAGTGGTTGATTTA+AGG | + | chr1_3:64283308-64283327 | Msa0133030:CDS | 25.0% |
| ! | CTTTATGTAGTGTTTATTCA+GGG | + | chr1_3:64283503-64283522 | Msa0133030:CDS | 25.0% |
| ! | TTTATGTAGTGTTTATTCAG+GGG | + | chr1_3:64283504-64283523 | Msa0133030:CDS | 25.0% |
| !! | TTTTAGACATCTACAATATG+AGG | + | chr1_3:64283597-64283616 | Msa0133030:CDS | 25.0% |
| ! | CAAATTATTGGCAAACAAAA+AGG | - | chr1_3:64283687-64283706 | None:intergenic | 25.0% |
| ! | TTTGGTCCTTGATATCTTTT+AGG | - | chr1_3:64281068-64281087 | None:intergenic | 30.0% |
| GACCAAAGAATTTATACAAG+AGG | + | chr1_3:64281081-64281100 | Msa0133030:CDS | 30.0% | |
| CACCTCTTGTATAAATTCTT+TGG | - | chr1_3:64281086-64281105 | None:intergenic | 30.0% | |
| !! | AATTTATACAAGAGGTGTTG+CGG | + | chr1_3:64281089-64281108 | Msa0133030:CDS | 30.0% |
| !! | AGTTTGATTTGATGTTCCTT+TGG | - | chr1_3:64281177-64281196 | None:intergenic | 30.0% |
| ! | TTGATGATAGAATACTGATG+GGG | + | chr1_3:64281380-64281399 | Msa0133030:intron | 30.0% |
| ! | TATGTTTGGAGTATTACAAC+AGG | + | chr1_3:64281407-64281426 | Msa0133030:intron | 30.0% |
| ! | ATGTTTGGAGTATTACAACA+GGG | + | chr1_3:64281408-64281427 | Msa0133030:intron | 30.0% |
| ! | CAATTTTATGGGGATGTAAT+TGG | + | chr1_3:64281445-64281464 | Msa0133030:intron | 30.0% |
| AATAGAGTGGAATCATTGAA+TGG | - | chr1_3:64281582-64281601 | None:intergenic | 30.0% | |
| TCTGAAGAAAAACAATAGAG+TGG | - | chr1_3:64281595-64281614 | None:intergenic | 30.0% | |
| TTATTATAAGTCCCTTTGTG+GGG | - | chr1_3:64281924-64281943 | None:intergenic | 30.0% | |
| CTTATTATAAGTCCCTTTGT+GGG | - | chr1_3:64281925-64281944 | None:intergenic | 30.0% | |
| CACAAAGGGACTTATAATAA+GGG | + | chr1_3:64281924-64281943 | Msa0133030:intron | 30.0% | |
| ATTAAGCTCAATGAAATCCT+AGG | - | chr1_3:64282044-64282063 | None:intergenic | 30.0% | |
| !!! | TTAGAGTGTTATTTTCCATG+AGG | + | chr1_3:64282309-64282328 | Msa0133030:intron | 30.0% |
| ! | GATATCTATTTTCATCCTCA+TGG | - | chr1_3:64282327-64282346 | None:intergenic | 30.0% |
| TCTCATGAAGAAGAAAAAAG+AGG | + | chr1_3:64282389-64282408 | Msa0133030:intron | 30.0% | |
| TTGTCATTGTTGTGATCTAA+AGG | + | chr1_3:64282572-64282591 | Msa0133030:intron | 30.0% | |
| TGTCATTGTTGTGATCTAAA+GGG | + | chr1_3:64282573-64282592 | Msa0133030:intron | 30.0% | |
| TAAAGGGAAAAAAGTGAAGA+AGG | + | chr1_3:64282589-64282608 | Msa0133030:intron | 30.0% | |
| ! | AGGCTTTTCAGAAAATTTAC+TGG | + | chr1_3:64282714-64282733 | Msa0133030:CDS | 30.0% |
| !! | TTCTAGCGGATATTTTATCA+TGG | + | chr1_3:64282886-64282905 | Msa0133030:CDS | 30.0% |
| TGGATTACTTATTCGACAAT+TGG | + | chr1_3:64283112-64283131 | Msa0133030:CDS | 30.0% | |
| ATTCGACAATTGGAAATGAA+AGG | + | chr1_3:64283122-64283141 | Msa0133030:CDS | 30.0% | |
| TTCGACAATTGGAAATGAAA+GGG | + | chr1_3:64283123-64283142 | Msa0133030:CDS | 30.0% | |
| AATATATGTTGTCACTACCA+AGG | + | chr1_3:64283180-64283199 | Msa0133030:CDS | 30.0% | |
| ! | CTACGGGAAAATTTTTCATT+GGG | - | chr1_3:64283268-64283287 | None:intergenic | 30.0% |
| ATCACAATTAACTAACCTAC+GGG | - | chr1_3:64283284-64283303 | None:intergenic | 30.0% | |
| CATCACAATTAACTAACCTA+CGG | - | chr1_3:64283285-64283304 | None:intergenic | 30.0% | |
| ! | TTAGTGGTTGATTTAAGGTT+CGG | + | chr1_3:64283313-64283332 | Msa0133030:CDS | 30.0% |
| ! | CTCTAGTTTGACATAATTCA+TGG | - | chr1_3:64283374-64283393 | None:intergenic | 30.0% |
| TTATGTCAAACTAGAGACTT+TGG | + | chr1_3:64283378-64283397 | Msa0133030:CDS | 30.0% | |
| TATGTCAAACTAGAGACTTT+GGG | + | chr1_3:64283379-64283398 | Msa0133030:CDS | 30.0% | |
| CCTGAATAAACACTACATAA+AGG | - | chr1_3:64283505-64283524 | None:intergenic | 30.0% | |
| CCTTTATGTAGTGTTTATTC+AGG | + | chr1_3:64283502-64283521 | Msa0133030:CDS | 30.0% | |
| TTGGCAAACAAAAAGGAAAT+AGG | - | chr1_3:64283680-64283699 | None:intergenic | 30.0% | |
| TTGTTTGCCAATAATTTGAC+CGG | + | chr1_3:64283689-64283708 | Msa0133030:three_prime_UTR | 30.0% | |
| AAAGCTTCCATTCAGAATCA+GGG | + | chr1_3:64280814-64280833 | Msa0133030:five_prime_UTR | 35.0% | |
| AATGATTCCAGTTAAAGACG+AGG | - | chr1_3:64280905-64280924 | None:intergenic | 35.0% | |
| ! | AGGGCATACTCATTTAACTT+TGG | + | chr1_3:64281134-64281153 | Msa0133030:CDS | 35.0% |
| ! | GGGCATACTCATTTAACTTT+GGG | + | chr1_3:64281135-64281154 | Msa0133030:CDS | 35.0% |
| ! | TGTTTGGAGTATTACAACAG+GGG | + | chr1_3:64281409-64281428 | Msa0133030:intron | 35.0% |
| ! | TAGGGGTTCATGCAATTTTA+TGG | + | chr1_3:64281433-64281452 | Msa0133030:intron | 35.0% |
| ! | AGGGGTTCATGCAATTTTAT+GGG | + | chr1_3:64281434-64281453 | Msa0133030:intron | 35.0% |
| AAATAGAGTCCTAGATAGTG+TGG | - | chr1_3:64281525-64281544 | None:intergenic | 35.0% | |
| ACATCTATCTCGATTGTTGA+GGG | - | chr1_3:64281765-64281784 | None:intergenic | 35.0% | |
| AACATCTATCTCGATTGTTG+AGG | - | chr1_3:64281766-64281785 | None:intergenic | 35.0% | |
| CCAGAAACAAAATTTCAGTG+GGG | - | chr1_3:64281889-64281908 | None:intergenic | 35.0% | |
| CCCAGAAACAAAATTTCAGT+GGG | - | chr1_3:64281890-64281909 | None:intergenic | 35.0% | |
| !! | CCCACTGAAATTTTGTTTCT+GGG | + | chr1_3:64281887-64281906 | Msa0133030:intron | 35.0% |
| ACCCAGAAACAAAATTTCAG+TGG | - | chr1_3:64281891-64281910 | None:intergenic | 35.0% | |
| CCTTATTATAAGTCCCTTTG+TGG | - | chr1_3:64281926-64281945 | None:intergenic | 35.0% | |
| CCACAAAGGGACTTATAATA+AGG | + | chr1_3:64281923-64281942 | Msa0133030:intron | 35.0% | |
| AAGGGACTTATAATAAGGGA+CGG | + | chr1_3:64281928-64281947 | Msa0133030:intron | 35.0% | |
| CTGAAGAACACACTAATTGT+TGG | - | chr1_3:64281982-64282001 | None:intergenic | 35.0% | |
| GTGTTCTTCAGTAACAAAAG+TGG | + | chr1_3:64281991-64282010 | Msa0133030:intron | 35.0% | |
| CTTCAGTAACAAAAGTGGAA+AGG | + | chr1_3:64281996-64282015 | Msa0133030:intron | 35.0% | |
| ! | CTATTAGTTCTTCACTTCCT+AGG | + | chr1_3:64282024-64282043 | Msa0133030:intron | 35.0% |
| ! | TTTTTCTCACACGATTGTAG+TGG | + | chr1_3:64282161-64282180 | Msa0133030:intron | 35.0% |
| ! | TGCTGTTCTAGATGTTTGTT+TGG | + | chr1_3:64282433-64282452 | Msa0133030:intron | 35.0% |
| TAGATGTTTGTTTGGCGAAA+TGG | + | chr1_3:64282441-64282460 | Msa0133030:intron | 35.0% | |
| ATGAAATCAAGCACATCCAA+AGG | - | chr1_3:64282635-64282654 | None:intergenic | 35.0% | |
| !! | AATAAACTTTTTGGTCGGGT+AGG | - | chr1_3:64282817-64282836 | None:intergenic | 35.0% |
| AAAATATCCGCTAGAAGATG+TGG | - | chr1_3:64282882-64282901 | None:intergenic | 35.0% | |
| !! | TAGCGGATATTTTATCATGG+TGG | + | chr1_3:64282889-64282908 | Msa0133030:CDS | 35.0% |
| ! | AGCGGATATTTTATCATGGT+GGG | + | chr1_3:64282890-64282909 | Msa0133030:CDS | 35.0% |
| AACCACCAAGATAAATTCCT+CGG | - | chr1_3:64283041-64283060 | None:intergenic | 35.0% | |
| ! | TGGTTTTCTGCTACTATCTT+GGG | + | chr1_3:64283056-64283075 | Msa0133030:CDS | 35.0% |
| GTCTATCAATCTCGAAATTG+TGG | + | chr1_3:64283088-64283107 | Msa0133030:CDS | 35.0% | |
| ATCAATCTCGAAATTGTGGT+TGG | + | chr1_3:64283092-64283111 | Msa0133030:CDS | 35.0% | |
| TCGACAATTGGAAATGAAAG+GGG | + | chr1_3:64283124-64283143 | Msa0133030:CDS | 35.0% | |
| ! | CCTACGGGAAAATTTTTCAT+TGG | - | chr1_3:64283269-64283288 | None:intergenic | 35.0% |
| ! | CCAATGAAAAATTTTCCCGT+AGG | + | chr1_3:64283266-64283285 | Msa0133030:CDS | 35.0% |
| ! | TTGTGATGAGCAACTTTTAG+TGG | + | chr1_3:64283297-64283316 | Msa0133030:CDS | 35.0% |
| ATTGAGCAACCCAAATACAT+GGG | + | chr1_3:64283444-64283463 | Msa0133030:CDS | 35.0% | |
| TCTCATATCCCCATGTATTT+GGG | - | chr1_3:64283456-64283475 | None:intergenic | 35.0% | |
| AAAACACCAATCCAACATGA+AGG | - | chr1_3:64283581-64283600 | None:intergenic | 35.0% | |
| ! | ATTTGCAACACTGTTACTTG+TGG | + | chr1_3:64283642-64283661 | Msa0133030:exon | 35.0% |
| CAAAGCTTCCATTCAGAATC+AGG | + | chr1_3:64280813-64280832 | Msa0133030:five_prime_UTR | 40.0% | |
| ACCACAGAGGGATTAAGATT+GGG | - | chr1_3:64280842-64280861 | None:intergenic | 40.0% | |
| TGATTTGATGTTCCTTTGGC+AGG | - | chr1_3:64281173-64281192 | None:intergenic | 40.0% | |
| CAAATCAAACTTGAGACCAC+TGG | + | chr1_3:64281186-64281205 | Msa0133030:CDS | 40.0% | |
| ACTGATGGGGTCTATATGTT+TGG | + | chr1_3:64281393-64281412 | Msa0133030:intron | 40.0% | |
| GAGTATTACAACAGGGGTTA+GGG | + | chr1_3:64281415-64281434 | Msa0133030:intron | 40.0% | |
| AGTATTACAACAGGGGTTAG+GGG | + | chr1_3:64281416-64281435 | Msa0133030:intron | 40.0% | |
| ! | GGGGTTCATGCAATTTTATG+GGG | + | chr1_3:64281435-64281454 | Msa0133030:intron | 40.0% |
| AAGTCAAGATAACAAGGGCT+GGG | - | chr1_3:64281485-64281504 | None:intergenic | 40.0% | |
| TAAGTCAAGATAACAAGGGC+TGG | - | chr1_3:64281486-64281505 | None:intergenic | 40.0% | |
| GTTAACTGTCCACACTATCT+AGG | + | chr1_3:64281513-64281532 | Msa0133030:intron | 40.0% | |
| CATCTATCTCGATTGTTGAG+GGG | - | chr1_3:64281764-64281783 | None:intergenic | 40.0% | |
| !! | CCCCACTGAAATTTTGTTTC+TGG | + | chr1_3:64281886-64281905 | Msa0133030:intron | 40.0% |
| ! | ACGATTGTAGTGGAATTGCA+TGG | + | chr1_3:64282171-64282190 | Msa0133030:intron | 40.0% |
| ! | CGATTGTAGTGGAATTGCAT+GGG | + | chr1_3:64282172-64282191 | Msa0133030:intron | 40.0% |
| TAGGAAACTGTCAAATAGCG+AGG | - | chr1_3:64282208-64282227 | None:intergenic | 40.0% | |
| ! | TTTCTTTTTGTTGGGGAGCA+AGG | + | chr1_3:64282248-64282267 | Msa0133030:intron | 40.0% |
| ! | TTCTTTTTGTTGGGGAGCAA+GGG | + | chr1_3:64282249-64282268 | Msa0133030:intron | 40.0% |
| TGTTTGGCGAAATGGAGTAA+TGG | + | chr1_3:64282449-64282468 | Msa0133030:intron | 40.0% | |
| GTCGTCAAGATCTAGTGTTT+GGG | - | chr1_3:64282660-64282679 | None:intergenic | 40.0% | |
| !!! | GACGACCTTTTTCAATTTGC+CGG | + | chr1_3:64282674-64282693 | Msa0133030:CDS | 40.0% |
| ACACACCGGCAAATTGAAAA+AGG | - | chr1_3:64282682-64282701 | None:intergenic | 40.0% | |
| ATCTATGCCACATCTTCTAG+CGG | + | chr1_3:64282872-64282891 | Msa0133030:CDS | 40.0% | |
| ! | GCGGATATTTTATCATGGTG+GGG | + | chr1_3:64282891-64282910 | Msa0133030:CDS | 40.0% |
| TGATAAGACTCGGCTTCAAA+GGG | - | chr1_3:64282980-64282999 | None:intergenic | 40.0% | |
| ATGATAAGACTCGGCTTCAA+AGG | - | chr1_3:64282981-64283000 | None:intergenic | 40.0% | |
| GTGTTTGTCAAAAGCAAGCA+AGG | - | chr1_3:64283017-64283036 | None:intergenic | 40.0% | |
| ACACTCCGAGGAATTTATCT+TGG | + | chr1_3:64283033-64283052 | Msa0133030:CDS | 40.0% | |
| ! | GTGGTTTTCTGCTACTATCT+TGG | + | chr1_3:64283055-64283074 | Msa0133030:CDS | 40.0% |
| CGACAATTGGAAATGAAAGG+GGG | + | chr1_3:64283125-64283144 | Msa0133030:CDS | 40.0% | |
| AATTGGAAATGAAAGGGGGA+GGG | + | chr1_3:64283129-64283148 | Msa0133030:CDS | 40.0% | |
| ! | ATTTAAGGTTCGGCGAAGTA+AGG | + | chr1_3:64283323-64283342 | Msa0133030:CDS | 40.0% |
| CATTGAGCAACCCAAATACA+TGG | + | chr1_3:64283443-64283462 | Msa0133030:CDS | 40.0% | |
| TTGAGCAACCCAAATACATG+GGG | + | chr1_3:64283445-64283464 | Msa0133030:CDS | 40.0% | |
| CTCTCATATCCCCATGTATT+TGG | - | chr1_3:64283457-64283476 | None:intergenic | 40.0% | |
| TTGATTACGCTTCCAACTCA+AGG | + | chr1_3:64283547-64283566 | Msa0133030:CDS | 40.0% | |
| CAAGTTCCTTCATGTTGGAT+TGG | + | chr1_3:64283572-64283591 | Msa0133030:CDS | 40.0% | |
| TCCTACTCCGGTCAAATTAT+TGG | - | chr1_3:64283699-64283718 | None:intergenic | 40.0% | |
| ! | ATTGCAAGCTTTTCCTACTC+CGG | - | chr1_3:64283711-64283730 | None:intergenic | 40.0% |
| TTGGGAACCCTGATTCTGAA+TGG | - | chr1_3:64280824-64280843 | None:intergenic | 45.0% | |
| TCCCAATCTTAATCCCTCTG+TGG | + | chr1_3:64280838-64280857 | Msa0133030:five_prime_UTR | 45.0% | |
| CACCACAGAGGGATTAAGAT+TGG | - | chr1_3:64280843-64280862 | None:intergenic | 45.0% | |
| TCTGTACAGTTCACCACAGA+GGG | - | chr1_3:64280854-64280873 | None:intergenic | 45.0% | |
| ATCTGTACAGTTCACCACAG+AGG | - | chr1_3:64280855-64280874 | None:intergenic | 45.0% | |
| GTATGCTCCTCGTCTTTAAC+TGG | + | chr1_3:64280895-64280914 | Msa0133030:intron | 45.0% | |
| TACCTCGTCATGGTAGTTCT+GGG | - | chr1_3:64281007-64281026 | None:intergenic | 45.0% | |
| ATTCAACACCTTCCTGCCAA+AGG | + | chr1_3:64281158-64281177 | Msa0133030:CDS | 45.0% | |
| TTGATGTTCCTTTGGCAGGA+AGG | - | chr1_3:64281169-64281188 | None:intergenic | 45.0% | |
| ! | GGAGTATTACAACAGGGGTT+AGG | + | chr1_3:64281414-64281433 | Msa0133030:intron | 45.0% |
| AGTCAAGATAACAAGGGCTG+GGG | - | chr1_3:64281484-64281503 | None:intergenic | 45.0% | |
| ! | GAGGGGTGGTCGTAAATTTT+GGG | - | chr1_3:64281747-64281766 | None:intergenic | 45.0% |
| ! | TGAGGGGTGGTCGTAAATTT+TGG | - | chr1_3:64281748-64281767 | None:intergenic | 45.0% |
| AGAGAACCGTGAACTTCCTT+TGG | + | chr1_3:64282616-64282635 | Msa0133030:CDS | 45.0% | |
| GCACATCCAAAGGAAGTTCA+CGG | - | chr1_3:64282625-64282644 | None:intergenic | 45.0% | |
| GGTCGTCAAGATCTAGTGTT+TGG | - | chr1_3:64282661-64282680 | None:intergenic | 45.0% | |
| CTTCCAATTCTTGCACACAC+CGG | - | chr1_3:64282696-64282715 | None:intergenic | 45.0% | |
| GATAAGACTCGGCTTCAAAG+GGG | - | chr1_3:64282979-64282998 | None:intergenic | 45.0% | |
| TGTCAAAAGCAAGCAAGGCA+CGG | - | chr1_3:64283012-64283031 | None:intergenic | 45.0% | |
| ! | TGCTTTTGACAAACACTCCG+AGG | + | chr1_3:64283021-64283040 | Msa0133030:CDS | 45.0% |
| CTCCGAGGAATTTATCTTGG+TGG | + | chr1_3:64283036-64283055 | Msa0133030:CDS | 45.0% | |
| CAATTGGAAATGAAAGGGGG+AGG | + | chr1_3:64283128-64283147 | Msa0133030:CDS | 45.0% | |
| TCACTACCAAGGCCAACATA+GGG | + | chr1_3:64283191-64283210 | Msa0133030:CDS | 45.0% | |
| CAAGCTAAGTACCCCTATGT+TGG | - | chr1_3:64283206-64283225 | None:intergenic | 45.0% | |
| ! | AAGGAACTTGCTCCTTGAGT+TGG | - | chr1_3:64283562-64283581 | None:intergenic | 45.0% |
| AGGAGCAAGTTCCTTCATGT+TGG | + | chr1_3:64283567-64283586 | Msa0133030:CDS | 45.0% | |
| ! | GCAACACTGTTACTTGTGGT+CGG | + | chr1_3:64283646-64283665 | Msa0133030:three_prime_UTR | 45.0% |
| GCCAATAATTTGACCGGAGT+AGG | + | chr1_3:64283695-64283714 | Msa0133030:three_prime_UTR | 45.0% | |
| GGAGTAGGAAAAGCTTGCAA+TGG | + | chr1_3:64283710-64283729 | Msa0133030:three_prime_UTR | 45.0% | |
| ! | AGGAGCATACCATTGTAGGC+TGG | - | chr1_3:64280885-64280904 | None:intergenic | 50.0% |
| ! | GACGAGGAGCATACCATTGT+AGG | - | chr1_3:64280889-64280908 | None:intergenic | 50.0% |
| ! | ACCTCGTCATGGTAGTTCTG+GGG | - | chr1_3:64281006-64281025 | None:intergenic | 50.0% |
| CTACCTCGTCATGGTAGTTC+TGG | - | chr1_3:64281008-64281027 | None:intergenic | 50.0% | |
| CAGCTTGTACTACCTCGTCA+TGG | - | chr1_3:64281017-64281036 | None:intergenic | 50.0% | |
| AGAGTCAAGGAGCTGCTTGA+AGG | + | chr1_3:64281114-64281133 | Msa0133030:CDS | 50.0% | |
| GAGTCAAGGAGCTGCTTGAA+GGG | + | chr1_3:64281115-64281134 | Msa0133030:CDS | 50.0% | |
| CTATCTCGATTGTTGAGGGG+TGG | - | chr1_3:64281761-64281780 | None:intergenic | 50.0% | |
| AAGTCCCTTTGTGGGGACAA+GGG | - | chr1_3:64281917-64281936 | None:intergenic | 50.0% | |
| TAAGTCCCTTTGTGGGGACA+AGG | - | chr1_3:64281918-64281937 | None:intergenic | 50.0% | |
| GACGCTTTGACACTCTCTCA+TGG | - | chr1_3:64282120-64282139 | None:intergenic | 50.0% | |
| TTGCCGGTGTGTGCAAGAAT+TGG | + | chr1_3:64282690-64282709 | Msa0133030:CDS | 50.0% | |
| CGGTGTGTGCAAGAATTGGA+AGG | + | chr1_3:64282694-64282713 | Msa0133030:CDS | 50.0% | |
| TTGGTCGGGTAGGCTAATCA+AGG | - | chr1_3:64282807-64282826 | None:intergenic | 50.0% | |
| GTCACTACCAAGGCCAACAT+AGG | + | chr1_3:64283190-64283209 | Msa0133030:CDS | 50.0% | |
| CACTACCAAGGCCAACATAG+GGG | + | chr1_3:64283192-64283211 | Msa0133030:CDS | 50.0% | |
| ! | AAGTACCCCTATGTTGGCCT+TGG | - | chr1_3:64283200-64283219 | None:intergenic | 50.0% |
| ATCAGCCTGCCAGCCTACAA+TGG | + | chr1_3:64280873-64280892 | Msa0133030:exon | 55.0% | |
| GCATACCATTGTAGGCTGGC+AGG | - | chr1_3:64280881-64280900 | None:intergenic | 55.0% | |
| !! | CCTCGTCATGGTAGTTCTGG+GGG | - | chr1_3:64281005-64281024 | None:intergenic | 55.0% |
| ! | AGGTGTTGCGGCAAGAGTCA+AGG | + | chr1_3:64281101-64281120 | Msa0133030:CDS | 55.0% |
| TCTGCCCTTGTCCCCACAAA+GGG | + | chr1_3:64281910-64281929 | Msa0133030:intron | 55.0% | |
| !! | GGGGAGGGTTGTTGACTTTG+TGG | + | chr1_3:64283144-64283163 | Msa0133030:CDS | 55.0% |
| CCCCCAGAACTACCATGACG+AGG | + | chr1_3:64281002-64281021 | Msa0133030:CDS | 60.0% | |
| GTCTGCCCTTGTCCCCACAA+AGG | + | chr1_3:64281909-64281928 | Msa0133030:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 64280790 | 64283853 | 64280790 | ID=Msa0133030;Name=Msa0133030 |
| chr1_3 | mRNA | 64280790 | 64283853 | 64280790 | ID=Msa0133030-mRNA-1;Parent=Msa0133030;Name=Msa0133030-mRNA-1;_AED=0.01;_eAED=0.01;_QI=102|1|1|1|0.5|0.66|3|211|421 |
| chr1_3 | exon | 64280790 | 64280894 | 64280790 | ID=Msa0133030-mRNA-1:exon:21546;Parent=Msa0133030-mRNA-1 |
| chr1_3 | exon | 64280994 | 64281207 | 64280994 | ID=Msa0133030-mRNA-1:exon:21547;Parent=Msa0133030-mRNA-1 |
| chr1_3 | exon | 64282594 | 64283853 | 64282594 | ID=Msa0133030-mRNA-1:exon:21548;Parent=Msa0133030-mRNA-1 |
| chr1_3 | five_prime_UTR | 64280790 | 64280891 | 64280790 | ID=Msa0133030-mRNA-1:five_prime_utr;Parent=Msa0133030-mRNA-1 |
| chr1_3 | CDS | 64280892 | 64280894 | 64280892 | ID=Msa0133030-mRNA-1:cds;Parent=Msa0133030-mRNA-1 |
| chr1_3 | CDS | 64280994 | 64281207 | 64280994 | ID=Msa0133030-mRNA-1:cds;Parent=Msa0133030-mRNA-1 |
| chr1_3 | CDS | 64282594 | 64283642 | 64282594 | ID=Msa0133030-mRNA-1:cds;Parent=Msa0133030-mRNA-1 |
| chr1_3 | three_prime_UTR | 64283643 | 64283853 | 64283643 | ID=Msa0133030-mRNA-1:three_prime_utr;Parent=Msa0133030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
