AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0133770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133770 MtrunA17_Chr1g0203411 92.459 305 13 1 1 305 1 295 0.0 583
Msa0133770 MtrunA17_Chr8g0349261 47.022 319 117 10 1 290 1 296 8.72e-88 264
Msa0133770 MtrunA17_Chr7g0217741 60.000 185 62 3 1 174 1 184 8.46e-73 226
Msa0133770 MtrunA17_Chr6g0453471 63.158 171 55 3 1 163 1 171 6.26e-71 223
Msa0133770 MtrunA17_Chr4g0042671 61.047 172 59 1 1 164 1 172 2.21e-68 218
Msa0133770 MtrunA17_Chr7g0247131 48.529 272 101 8 44 293 10 264 6.14e-68 213
Msa0133770 MtrunA17_Chr1g0187761 76.471 119 28 0 1 119 1 119 4.61e-66 207
Msa0133770 MtrunA17_Chr1g0167691 77.586 116 26 0 1 116 1 116 5.28e-66 207
Msa0133770 MtrunA17_Chr4g0039971 74.576 118 30 0 1 118 2 119 2.84e-64 206
Msa0133770 MtrunA17_Chr1g0167661 62.914 151 45 1 1 140 1 151 1.97e-63 201
Msa0133770 MtrunA17_Chr2g0281071 73.504 117 30 1 1 116 1 117 8.09e-63 202
Msa0133770 MtrunA17_Chr4g0048511 73.504 117 30 1 1 116 1 117 1.41e-62 202
Msa0133770 MtrunA17_Chr3g0115821 70.339 118 35 0 1 118 1 118 7.06e-62 199
Msa0133770 MtrunA17_Chr7g0261281 69.672 122 37 0 1 122 1 122 3.59e-61 196
Msa0133770 MtrunA17_Chr2g0323411 70.588 119 35 0 1 119 1 119 5.80e-61 196
Msa0133770 MtrunA17_Chr7g0274581 66.387 119 40 0 1 119 1 119 2.62e-60 191
Msa0133770 MtrunA17_Chr5g0410961 71.552 116 33 0 1 116 1 116 3.62e-60 195
Msa0133770 MtrunA17_Chr4g0068061 69.828 116 35 0 1 116 1 116 2.72e-59 192
Msa0133770 MtrunA17_Chr4g0037141 42.623 244 115 6 1 241 1 222 9.99e-59 189
Msa0133770 MtrunA17_Chr4g0060721 50.556 180 78 4 1 175 2 175 1.06e-58 191
Msa0133770 MtrunA17_Chr3g0131121 68.966 116 36 0 1 116 1 116 1.10e-58 190
Msa0133770 MtrunA17_Chr1g0193371 68.908 119 37 0 1 119 1 119 1.30e-58 192
Msa0133770 MtrunA17_Chr7g0217221 68.067 119 38 0 1 119 1 119 2.61e-58 188
Msa0133770 MtrunA17_Chr5g0395281 68.644 118 37 0 1 118 1 118 1.00e-57 187
Msa0133770 MtrunA17_Chr7g0254411 68.644 118 37 0 1 118 1 118 3.11e-57 187
Msa0133770 MtrunA17_Chr3g0092401 66.949 118 39 0 1 118 2 119 4.19e-57 186
Msa0133770 MtrunA17_Chr4g0070611 67.521 117 38 0 1 117 1 117 4.36e-57 186
Msa0133770 MtrunA17_Chr8g0385321 67.241 116 38 0 1 116 1 116 8.53e-57 186
Msa0133770 MtrunA17_Chr4g0070641 67.521 117 38 0 1 117 1 117 1.08e-56 180
Msa0133770 MtrunA17_Chr7g0275911 65.812 117 40 0 1 117 1 117 1.12e-56 183
Msa0133770 MtrunA17_Chr1g0193801 66.949 118 39 0 1 118 1 118 1.73e-56 187
Msa0133770 MtrunA17_Chr7g0270891 66.102 118 40 0 1 118 1 118 3.28e-56 186
Msa0133770 MtrunA17_Chr8g0346561 57.241 145 49 1 1 145 1 132 5.38e-56 183
Msa0133770 MtrunA17_Chr6g0453211 69.369 111 34 0 1 111 1 111 2.17e-55 182
Msa0133770 MtrunA17_Chr7g0228891 56.081 148 56 1 1 139 1 148 8.49e-55 179
Msa0133770 MtrunA17_Chr3g0121241 68.750 112 35 0 5 116 35 146 1.87e-54 179
Msa0133770 MtrunA17_Chr3g0103281 65.517 116 40 0 1 116 1 116 5.79e-54 178
Msa0133770 MtrunA17_Chr8g0387421 64.407 118 42 0 1 118 1 118 7.87e-54 178
Msa0133770 MtrunA17_Chr1g0194951 65.517 116 40 0 1 116 1 116 8.21e-54 179
Msa0133770 MtrunA17_Chr5g0435101 62.281 114 43 0 3 116 2 115 1.01e-53 174
Msa0133770 MtrunA17_Chr7g0271241 68.807 109 34 0 1 109 1 109 1.05e-53 179
Msa0133770 MtrunA17_Chr2g0330041 64.655 116 41 0 1 116 1 116 2.01e-53 179
Msa0133770 MtrunA17_Chr2g0323351 64.655 116 41 0 1 116 1 116 2.10e-53 175
Msa0133770 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 3.80e-53 176
Msa0133770 MtrunA17_Chr8g0342541 63.793 116 42 0 1 116 1 116 4.35e-53 177
Msa0133770 MtrunA17_Chr1g0151941 54.110 146 62 2 1 145 1 142 6.89e-53 173
Msa0133770 MtrunA17_Chr8g0342521 63.793 116 42 0 1 116 1 116 1.20e-52 176
Msa0133770 MtrunA17_Chr2g0309911 65.766 111 38 0 6 116 5 115 1.69e-52 174
Msa0133770 MtrunA17_Chr4g0022931 64.103 117 41 1 1 116 1 117 2.35e-52 172
Msa0133770 MtrunA17_Chr3g0110351 61.864 118 45 0 1 118 1 118 3.05e-52 174
Msa0133770 MtrunA17_Chr4g0028311 65.812 117 39 1 1 116 1 117 4.83e-52 173
Msa0133770 MtrunA17_Chr5g0434571 61.864 118 45 0 1 118 37 154 5.98e-52 174
Msa0133770 MtrunA17_Chr4g0058631 63.793 116 42 0 1 116 1 116 6.35e-52 174
Msa0133770 MtrunA17_Chr7g0269831 68.103 116 37 0 1 116 1 116 1.35e-51 173
Msa0133770 MtrunA17_Chr2g0327351 61.538 130 49 1 1 129 1 130 1.99e-51 172
Msa0133770 MtrunA17_Chr4g0022891 57.895 133 49 2 1 126 1 133 2.00e-51 169
Msa0133770 MtrunA17_Chr5g0417821 51.250 160 73 2 11 169 6 161 2.19e-51 171
Msa0133770 MtrunA17_Chr5g0397231 67.273 110 36 0 1 110 1 110 4.18e-51 171
Msa0133770 MtrunA17_Chr4g0057031 63.793 116 42 0 1 116 1 116 5.28e-51 169
Msa0133770 MtrunA17_Chr3g0135311 57.343 143 53 3 1 136 1 142 6.73e-51 171
Msa0133770 MtrunA17_Chr4g0022901 62.393 117 43 1 1 116 1 117 1.25e-50 168
Msa0133770 MtrunA17_Chr3g0117091 62.712 118 44 0 1 118 1 118 1.43e-50 170
Msa0133770 MtrunA17_Chr7g0264641 60.684 117 45 1 1 116 1 117 5.02e-50 167
Msa0133770 MtrunA17_Chr4g0022911 59.829 117 46 1 1 116 1 117 8.25e-50 167
Msa0133770 MtrunA17_Chr6g0452271 61.207 116 45 0 1 116 1 116 8.91e-50 168
Msa0133770 MtrunA17_Chr4g0044421 61.207 116 45 0 1 116 1 116 1.11e-49 163
Msa0133770 MtrunA17_Chr1g0152011 61.538 117 44 1 1 116 1 117 3.05e-49 167
Msa0133770 MtrunA17_Chr1g0211161 63.063 111 41 0 6 116 7 117 3.25e-49 163
Msa0133770 MtrunA17_Chr5g0400821 58.400 125 51 1 1 124 1 125 3.87e-49 166
Msa0133770 MtrunA17_Chr4g0022881 60.526 114 45 0 1 114 1 114 4.15e-49 163
Msa0133770 MtrunA17_Chr1g0203441 64.815 108 38 0 13 120 14 121 9.68e-49 163
Msa0133770 MtrunA17_Chr8g0342481 60.684 117 45 1 1 116 1 117 2.77e-48 166
Msa0133770 MtrunA17_Chr4g0054391 64.545 110 38 1 1 109 1 110 9.82e-48 161
Msa0133770 MtrunA17_Chr4g0072751 63.063 111 40 1 1 110 1 111 1.49e-46 160
Msa0133770 MtrunA17_Chr6g0470971 60.714 112 44 0 4 115 6 117 1.92e-46 158
Msa0133770 MtrunA17_Chr2g0328771 60.377 106 42 0 12 117 20 125 1.95e-46 159
Msa0133770 MtrunA17_Chr4g0032401 60.748 107 42 0 12 118 17 123 6.68e-46 158
Msa0133770 MtrunA17_Chr3g0080861 64.220 109 39 0 12 120 37 145 1.28e-45 161
Msa0133770 MtrunA17_Chr6g0487491 58.065 124 43 2 1 115 1 124 1.83e-45 154
Msa0133770 MtrunA17_Chr2g0322521 59.200 125 47 1 11 135 28 148 2.94e-45 158
Msa0133770 MtrunA17_Chr3g0099131 61.468 109 42 0 12 120 41 149 3.02e-45 160
Msa0133770 MtrunA17_Chr3g0088461 61.468 109 42 0 9 117 19 127 3.67e-45 156
Msa0133770 MtrunA17_Chr4g0055981 62.617 107 40 0 9 115 52 158 1.01e-44 152
Msa0133770 MtrunA17_Chr8g0354661 59.829 117 47 0 12 128 37 153 1.53e-44 159
Msa0133770 MtrunA17_Chr7g0228231 60.185 108 43 0 12 119 14 121 6.99e-44 149
Msa0133770 MtrunA17_Chr8g0343831 59.813 107 43 0 12 118 8 114 1.30e-43 149
Msa0133770 MtrunA17_Chr6g0450101 55.833 120 51 1 1 118 1 120 2.34e-43 147
Msa0133770 MtrunA17_Chr1g0209661 58.559 111 46 0 8 118 23 133 5.44e-43 149
Msa0133770 MtrunA17_Chr7g0220341 62.037 108 39 1 11 116 24 131 3.22e-42 146
Msa0133770 MtrunA17_Chr1g0168661 54.783 115 52 0 6 120 15 129 5.11e-42 145
Msa0133770 MtrunA17_Chr1g0186061 59.223 103 42 0 13 115 21 123 7.07e-42 145
Msa0133770 MtrunA17_Chr1g0194291 60.185 108 43 0 11 118 20 127 7.28e-42 145
Msa0133770 MtrunA17_Chr5g0434831 59.434 106 43 0 11 116 6 111 9.99e-42 142
Msa0133770 MtrunA17_Chr4g0042611 69.318 88 27 0 1 88 1 88 2.66e-41 138
Msa0133770 MtrunA17_Chr5g0434911 56.364 110 48 0 7 116 16 125 3.31e-41 144
Msa0133770 MtrunA17_Chr5g0434931 58.491 106 44 0 11 116 34 139 1.42e-40 142
Msa0133770 MtrunA17_Chr1g0154031 54.688 128 51 2 12 133 76 202 1.62e-40 145
Msa0133770 MtrunA17_Chr1g0194301 56.075 107 47 0 12 118 33 139 1.73e-40 142
Msa0133770 MtrunA17_Chr2g0294811 65.217 92 32 0 1 92 1 92 3.87e-40 136
Msa0133770 MtrunA17_Chr1g0180391 57.273 110 45 1 10 117 15 124 7.92e-40 139
Msa0133770 MtrunA17_Chr7g0240821 59.406 101 41 0 16 116 5 105 2.40e-39 137
Msa0133770 MtrunA17_Chr7g0228991 58.491 106 44 0 11 116 28 133 5.20e-39 138
Msa0133770 MtrunA17_Chr5g0434841 56.604 106 46 0 11 116 19 124 3.00e-38 137
Msa0133770 MtrunA17_Chr8g0360111 57.843 102 43 0 11 112 24 125 3.75e-38 135
Msa0133770 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 1.43e-37 129
Msa0133770 MtrunA17_Chr2g0293911 58.879 107 44 0 12 118 24 130 2.86e-37 135
Msa0133770 MtrunA17_Chr4g0068921 57.944 107 45 0 12 118 24 130 1.05e-36 130
Msa0133770 MtrunA17_Chr2g0327821 51.818 110 53 0 12 121 6 115 1.13e-36 131
Msa0133770 MtrunA17_Chr8g0342531 61.798 89 34 0 1 89 1 89 1.49e-36 128
Msa0133770 MtrunA17_Chr1g0192411 51.376 109 53 0 12 120 12 120 1.57e-36 135
Msa0133770 MtrunA17_Chr5g0440781 43.200 125 70 1 12 135 12 136 2.25e-34 124
Msa0133770 MtrunA17_Chr8g0342461 60.000 90 35 1 1 89 1 90 3.11e-34 122
Msa0133770 MtrunA17_Chr8g0342471 60.000 90 35 1 1 89 1 90 7.22e-34 120
Msa0133770 MtrunA17_Chr5g0440761 43.200 125 70 1 12 135 12 136 8.44e-34 124
Msa0133770 MtrunA17_Chr5g0441141 43.200 125 70 1 12 135 12 136 1.24e-33 124
Msa0133770 MtrunA17_Chr5g0441131 50.000 104 51 1 12 114 9 112 1.44e-33 121
Msa0133770 MtrunA17_Chr5g0395221 61.364 88 34 0 1 88 1 88 1.62e-33 118
Msa0133770 MtrunA17_Chr4g0030881 46.667 120 57 1 13 125 8 127 7.72e-33 122
Msa0133770 MtrunA17_Chr2g0323321 54.348 92 41 1 1 92 1 91 1.82e-32 116
Msa0133770 MtrunA17_Chr4g0013361 45.378 119 64 1 8 125 6 124 3.29e-32 121
Msa0133770 MtrunA17_Chr3g0099141 56.627 83 36 0 12 94 40 122 2.22e-31 114
Msa0133770 MtrunA17_Chr8g0334881 48.598 107 54 1 12 117 10 116 5.04e-31 118
Msa0133770 MtrunA17_Chr6g0454921 45.385 130 68 2 14 143 15 141 5.46e-31 115
Msa0133770 MtrunA17_Chr5g0401731 52.941 102 47 1 14 115 15 115 5.81e-30 115
Msa0133770 MtrunA17_Chr4g0008551 51.456 103 47 2 14 115 38 138 1.16e-28 112
Msa0133770 MtrunA17_Chr3g0139671 47.664 107 55 1 14 120 85 190 2.41e-28 115
Msa0133770 MtrunA17_Chr3g0139671 30.189 106 72 2 14 118 33 137 8.51e-11 62.8
Msa0133770 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 4.79e-28 109
Msa0133770 MtrunA17_Chr3g0133601 47.573 103 53 1 14 116 37 138 7.71e-27 105
Msa0133770 MtrunA17_Chr1g0157731 43.925 107 59 1 14 120 91 196 1.32e-26 110
Msa0133770 MtrunA17_Chr1g0157731 30.189 106 72 2 14 118 39 143 4.92e-11 63.5
Msa0133770 MtrunA17_Chr7g0229131 56.962 79 34 0 44 122 4 82 2.59e-26 102
Msa0133770 MtrunA17_Chr7g0229101 61.429 70 27 0 44 113 4 73 3.21e-26 102
Msa0133770 MtrunA17_Chr6g0480581 46.667 105 54 2 14 118 4 106 1.11e-25 102
Msa0133770 MtrunA17_Chr5g0417621 36.747 166 84 4 14 178 134 279 3.80e-25 104
Msa0133770 MtrunA17_Chr7g0238631 47.573 103 53 1 14 116 113 214 3.96e-25 105
Msa0133770 MtrunA17_Chr7g0238631 31.132 106 71 2 14 118 61 165 4.81e-11 63.2
Msa0133770 MtrunA17_Chr5g0434901 63.636 66 24 0 48 113 9 74 5.07e-25 97.1
Msa0133770 MtrunA17_Chr5g0429661 45.536 112 55 3 14 124 122 228 7.00e-25 102
Msa0133770 MtrunA17_Chr4g0042501 33.908 174 97 3 14 186 105 261 8.38e-25 103
Msa0133770 MtrunA17_Chr4g0058991 43.966 116 61 3 12 125 207 320 1.72e-24 102
Msa0133770 MtrunA17_Chr5g0425591 45.882 85 45 1 12 95 9 93 3.45e-24 94.0
Msa0133770 MtrunA17_Chr5g0437321 46.465 99 52 1 14 112 19 116 5.85e-24 99.0
Msa0133770 MtrunA17_Chr3g0117511 42.478 113 63 2 14 125 183 294 1.57e-23 99.8
Msa0133770 MtrunA17_Chr5g0397841 45.000 100 54 1 10 109 106 204 5.84e-23 98.6
Msa0133770 MtrunA17_Chr6g0460661 41.121 107 62 1 14 120 16 121 8.06e-23 92.8
Msa0133770 MtrunA17_Chr7g0254261 40.678 118 66 2 14 128 89 205 1.18e-22 96.3
Msa0133770 MtrunA17_Chr3g0125801 45.283 106 55 2 14 118 16 119 5.14e-22 93.6
Msa0133770 MtrunA17_Chr7g0228531 41.593 113 61 3 12 124 218 325 6.83e-22 95.1
Msa0133770 MtrunA17_Chr3g0093811 54.667 75 34 0 44 118 14 88 8.70e-22 92.4
Msa0133770 MtrunA17_Chr6g0453751 44.681 94 43 2 11 95 19 112 4.11e-21 87.0
Msa0133770 MtrunA17_Chr7g0238651 41.667 108 61 1 14 119 7 114 5.38e-21 91.7
Msa0133770 MtrunA17_Chr6g0460671 39.252 107 64 1 14 120 99 204 1.18e-20 90.9
Msa0133770 MtrunA17_Chr7g0228401 46.512 86 45 1 25 110 290 374 4.42e-19 87.4
Msa0133770 MtrunA17_Chr1g0177901 45.349 86 46 1 25 110 5 89 2.64e-18 81.6
Msa0133770 MtrunA17_Chr7g0228481 38.384 99 59 2 12 110 218 314 1.75e-17 82.4
Msa0133770 MtrunA17_Chr7g0233061 36.522 115 57 4 14 122 180 284 9.57e-17 79.7
Msa0133770 MtrunA17_Chr7g0247141 60.417 48 18 1 1 47 1 48 1.15e-16 73.2
Msa0133770 MtrunA17_Chr5g0416341 37.273 110 65 2 8 117 23 128 1.93e-16 79.3
Msa0133770 MtrunA17_Chr4g0042621 51.190 84 33 1 89 164 15 98 3.36e-16 77.8
Msa0133770 MtrunA17_Chr8g0362231 36.283 113 68 2 8 120 19 127 4.04e-16 78.2
Msa0133770 MtrunA17_Chr1g0193901 42.529 87 48 2 12 96 11 97 1.38e-14 68.9
Msa0133770 MtrunA17_Chr1g0193891 42.529 87 48 2 12 96 11 97 1.38e-14 68.9
Msa0133770 MtrunA17_Chr1g0193871 42.529 87 48 2 12 96 11 97 1.38e-14 68.9
Msa0133770 MtrunA17_Chr1g0193881 42.529 87 48 2 12 96 11 97 1.38e-14 68.9
Msa0133770 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 1.19e-13 65.1
Msa0133770 MtrunA17_Chr3g0104491 38.961 77 42 2 53 125 1 76 1.07e-11 64.3
Msa0133770 MtrunA17_Chr5g0434891 58.696 46 19 0 78 123 2 47 1.23e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133770 AT3G61250.1 51.815 303 107 8 1 290 1 277 3.68e-90 271
Msa0133770 AT3G01140.2 63.529 170 56 1 1 164 1 170 1.15e-73 230
Msa0133770 AT5G15310.1 61.988 171 59 1 1 165 1 171 3.48e-71 223
Msa0133770 AT5G15310.2 61.988 171 59 1 1 165 1 171 3.63e-71 223
Msa0133770 AT3G01140.1 62.941 170 57 1 1 164 44 213 4.17e-71 225
Msa0133770 AT5G15310.4 61.988 171 59 1 1 165 1 171 4.19e-71 220
Msa0133770 AT2G31180.1 75.833 120 29 0 1 120 1 120 1.60e-66 209
Msa0133770 AT4G05100.1 74.359 117 29 1 1 116 1 117 1.50e-64 206
Msa0133770 AT4G21440.1 73.276 116 31 0 1 116 1 116 7.02e-64 205
Msa0133770 AT3G23250.1 75.000 116 29 0 1 116 1 116 8.58e-64 203
Msa0133770 AT4G28110.1 71.429 119 34 0 1 119 1 119 2.29e-63 202
Msa0133770 AT5G16770.4 71.186 118 34 0 1 118 1 118 3.74e-63 202
Msa0133770 AT5G16770.3 71.186 118 34 0 1 118 1 118 3.74e-63 202
Msa0133770 AT5G16770.1 71.186 118 34 0 1 118 1 118 8.25e-63 202
Msa0133770 AT5G16770.2 71.186 118 34 0 1 118 1 118 8.25e-63 202
Msa0133770 AT3G02940.2 70.339 118 35 0 1 118 1 118 9.28e-63 201
Msa0133770 AT3G02940.1 70.339 118 35 0 1 118 1 118 2.56e-62 200
Msa0133770 AT3G02940.3 70.339 118 35 0 1 118 1 118 2.56e-62 200
Msa0133770 AT1G06180.1 52.062 194 88 2 1 194 1 189 1.84e-61 196
Msa0133770 AT1G34670.1 70.339 118 35 0 1 118 1 118 3.96e-61 199
Msa0133770 AT5G62470.2 70.339 118 35 0 1 118 1 118 5.59e-60 195
Msa0133770 AT1G35515.1 49.724 181 86 2 1 180 1 177 9.65e-60 190
Msa0133770 AT4G09460.1 68.966 116 36 0 1 116 1 116 1.05e-59 191
Msa0133770 AT2G16720.1 68.966 116 36 0 1 116 1 116 2.06e-59 191
Msa0133770 AT1G79180.1 70.339 118 35 0 2 119 4 121 2.18e-59 192
Msa0133770 AT5G60890.1 68.644 118 37 0 1 118 1 118 4.15e-59 191
Msa0133770 AT5G10280.1 67.797 118 38 0 1 118 1 118 6.46e-59 192
Msa0133770 AT5G62470.1 70.339 118 34 1 1 118 1 117 1.33e-58 191
Msa0133770 AT3G47600.1 68.644 118 37 0 1 118 1 118 1.69e-58 191
Msa0133770 AT4G38620.1 68.966 116 36 0 1 116 1 116 2.12e-58 189
Msa0133770 AT1G22640.1 68.103 116 37 0 1 116 1 116 2.69e-58 188
Msa0133770 AT1G74650.1 70.690 116 34 0 1 116 1 116 4.50e-58 189
Msa0133770 AT1G08810.1 67.227 119 39 0 1 119 1 119 9.44e-58 187
Msa0133770 AT5G65230.1 66.949 118 39 0 1 118 1 118 2.65e-57 187
Msa0133770 AT4G17785.2 65.546 119 40 1 1 118 1 119 3.86e-57 188
Msa0133770 AT5G49330.1 68.966 116 36 0 1 116 1 116 4.24e-57 187
Msa0133770 AT3G28910.1 65.323 124 43 0 1 124 1 124 4.30e-57 187
Msa0133770 AT4G17785.1 65.546 119 40 1 1 118 1 119 5.47e-57 187
Msa0133770 AT1G56160.1 68.696 115 36 0 2 116 4 118 6.80e-57 186
Msa0133770 AT1G16490.1 67.826 115 37 0 2 116 4 118 1.10e-56 184
Msa0133770 AT1G18570.1 69.231 117 35 1 1 116 1 117 1.70e-56 186
Msa0133770 AT4G34990.1 66.379 116 39 0 1 116 1 116 3.09e-56 183
Msa0133770 AT3G13890.2 66.379 116 39 0 1 116 1 116 3.10e-56 186
Msa0133770 AT3G62610.1 65.574 122 42 0 1 122 1 122 5.88e-56 184
Msa0133770 AT3G13540.1 66.949 118 38 1 4 120 15 132 9.02e-56 181
Msa0133770 AT4G01680.3 66.667 117 39 0 1 117 1 117 9.93e-56 181
Msa0133770 AT5G54230.1 71.552 116 33 0 1 116 1 116 1.13e-55 183
Msa0133770 AT2G47460.1 64.754 122 43 0 1 122 1 122 2.74e-55 184
Msa0133770 AT5G26660.1 64.407 118 42 0 1 118 1 118 3.90e-55 182
Msa0133770 AT4G01680.1 66.667 117 39 0 1 117 1 117 7.04e-55 181
Msa0133770 AT3G12820.1 69.298 114 35 0 3 116 5 118 1.03e-54 178
Msa0133770 AT5G61420.2 64.407 118 42 0 1 118 1 118 4.36e-54 180
Msa0133770 AT5G16600.1 64.407 118 42 0 1 118 1 118 4.93e-54 179
Msa0133770 AT1G57560.1 63.793 116 42 0 1 116 1 116 6.16e-54 178
Msa0133770 AT1G57560.2 63.793 116 42 0 1 116 1 116 7.29e-54 177
Msa0133770 AT5G56110.1 54.000 150 64 1 1 145 1 150 1.33e-53 178
Msa0133770 AT1G09540.1 62.712 118 44 0 1 118 1 118 1.69e-53 179
Msa0133770 AT1G63910.1 64.407 118 42 0 1 118 1 118 3.61e-53 178
Msa0133770 AT3G13890.1 61.600 125 39 1 1 116 1 125 3.85e-53 178
Msa0133770 AT5G07690.1 65.789 114 39 0 1 114 1 114 4.87e-53 177
Msa0133770 AT1G74080.1 64.912 114 40 0 1 114 1 114 5.70e-53 176
Msa0133770 AT3G12720.1 66.667 111 37 0 6 116 16 126 1.03e-52 175
Msa0133770 AT1G79180.2 54.967 151 35 1 2 119 4 154 1.04e-52 176
Msa0133770 AT4G12350.1 64.655 116 41 0 1 116 1 116 1.31e-52 174
Msa0133770 AT4G22680.1 63.793 116 42 0 1 116 1 116 3.21e-52 172
Msa0133770 AT1G66230.1 61.017 118 46 0 1 118 1 118 4.06e-52 173
Msa0133770 AT5G07700.1 64.655 116 41 0 1 116 1 116 4.88e-52 174
Msa0133770 AT5G07700.2 64.655 116 41 0 1 116 1 116 4.88e-52 174
Msa0133770 AT4G01680.2 60.465 129 39 1 1 117 1 129 1.97e-51 173
Msa0133770 AT1G74430.1 65.517 116 40 0 1 116 1 116 2.00e-51 171
Msa0133770 AT5G14340.1 61.864 118 45 0 1 118 13 130 8.18e-51 169
Msa0133770 AT5G57620.1 63.248 117 42 1 1 116 1 117 8.72e-51 171
Msa0133770 AT5G23000.1 63.248 117 42 1 1 116 1 117 3.99e-50 169
Msa0133770 AT5G65790.1 59.677 124 49 1 1 123 1 124 1.75e-49 169
Msa0133770 AT4G37780.1 60.684 117 45 1 1 116 1 117 2.94e-49 166
Msa0133770 AT2G36890.1 61.983 121 45 1 1 120 1 121 3.45e-49 166
Msa0133770 AT3G49690.1 59.843 127 46 2 1 122 1 127 4.28e-49 166
Msa0133770 AT2G36890.2 61.983 121 45 1 1 120 42 162 4.66e-49 166
Msa0133770 AT1G18710.1 62.931 116 43 0 1 116 1 116 8.91e-49 164
Msa0133770 AT5G06100.1 61.261 111 43 0 10 120 30 140 2.61e-48 167
Msa0133770 AT5G06100.5 61.261 111 43 0 10 120 30 140 1.23e-47 167
Msa0133770 AT5G06100.2 61.261 111 43 0 10 120 30 140 1.23e-47 167
Msa0133770 AT5G06100.3 61.261 111 43 0 10 120 30 140 1.23e-47 167
Msa0133770 AT5G06100.4 61.261 111 43 0 10 120 30 140 1.23e-47 167
Msa0133770 AT5G62320.1 58.197 122 44 1 2 116 3 124 2.21e-47 159
Msa0133770 AT5G35550.1 62.712 118 39 1 12 124 14 131 2.33e-47 160
Msa0133770 AT2G32460.1 62.832 113 42 0 8 120 14 126 6.03e-47 164
Msa0133770 AT2G32460.2 63.636 110 40 0 11 120 5 114 1.24e-46 164
Msa0133770 AT5G55020.1 61.017 118 46 0 12 129 26 143 2.01e-46 164
Msa0133770 AT5G40330.1 58.716 109 45 0 8 116 8 116 3.71e-46 155
Msa0133770 AT5G14750.1 61.538 104 40 0 13 116 17 120 5.26e-46 154
Msa0133770 AT5G12870.1 60.748 107 42 0 12 118 18 124 4.06e-45 154
Msa0133770 AT3G08500.1 60.550 109 43 0 9 117 27 135 6.53e-45 156
Msa0133770 AT3G28470.1 58.182 110 46 0 1 110 1 110 1.05e-44 154
Msa0133770 AT3G48920.1 60.185 108 43 0 9 116 15 122 2.03e-44 152
Msa0133770 AT3G11440.2 58.716 109 45 0 12 120 41 149 2.33e-44 157
Msa0133770 AT4G26930.1 57.600 125 48 1 12 136 19 138 2.38e-44 155
Msa0133770 AT3G27920.1 56.881 109 47 0 8 116 10 118 1.02e-43 149
Msa0133770 AT3G11440.3 55.462 119 53 0 12 130 41 159 1.04e-43 157
Msa0133770 AT3G11440.4 55.462 119 53 0 12 130 41 159 1.04e-43 157
Msa0133770 AT3G11440.1 55.462 119 53 0 12 130 41 159 1.04e-43 157
Msa0133770 AT3G30210.1 50.000 146 62 2 11 145 26 171 1.48e-43 150
Msa0133770 AT4G25560.1 59.130 115 45 1 1 115 1 113 3.93e-43 149
Msa0133770 AT3G27810.1 59.259 108 44 0 12 119 20 127 4.46e-43 147
Msa0133770 AT5G52600.1 61.538 104 40 0 12 115 12 115 7.49e-43 146
Msa0133770 AT3G01530.1 50.725 138 61 2 8 141 21 155 8.93e-43 146
Msa0133770 AT3G24310.1 60.748 107 42 0 11 117 17 123 1.18e-42 148
Msa0133770 AT5G40350.1 59.259 108 44 0 12 119 17 124 1.20e-42 146
Msa0133770 AT5G52260.1 60.870 115 45 0 1 115 1 115 1.22e-42 148
Msa0133770 AT2G26960.1 56.250 112 49 0 9 120 17 128 1.19e-41 149
Msa0133770 AT4G13480.1 58.879 107 44 0 13 119 7 113 2.31e-41 144
Msa0133770 AT1G48000.1 57.547 106 45 0 12 117 32 137 2.62e-39 138
Msa0133770 AT1G66370.1 53.043 115 50 1 1 115 1 111 3.51e-39 138
Msa0133770 AT3G46130.1 50.847 118 58 0 8 125 5 122 8.22e-39 137
Msa0133770 AT2G47190.1 52.727 110 52 0 8 117 16 125 2.34e-38 137
Msa0133770 AT1G25340.1 55.660 106 47 0 13 118 19 124 2.39e-38 137
Msa0133770 AT1G68320.1 57.009 107 46 0 12 118 19 125 2.49e-38 137
Msa0133770 AT5G59780.3 52.212 113 54 0 13 125 9 121 2.53e-38 135
Msa0133770 AT1G66380.1 58.095 105 44 0 11 115 7 111 6.47e-37 129
Msa0133770 AT5G49620.1 45.029 171 82 3 8 178 22 180 1.28e-36 133
Msa0133770 AT3G53200.1 57.692 104 44 0 12 115 9 112 1.35e-36 131
Msa0133770 AT1G56650.1 58.095 105 44 0 11 115 7 111 2.57e-36 130
Msa0133770 AT1G66390.1 58.095 105 44 0 11 115 7 111 1.10e-35 129
Msa0133770 AT3G06490.1 57.944 107 45 0 12 118 19 125 1.32e-35 131
Msa0133770 AT3G12820.2 75.714 70 17 0 47 116 1 70 3.21e-34 124
Msa0133770 AT1G25340.2 52.830 106 45 1 13 118 19 119 4.14e-34 125
Msa0133770 AT1G25340.3 52.830 106 45 1 13 118 19 119 5.61e-34 126
Msa0133770 AT2G26950.1 46.721 122 60 2 9 130 13 129 6.21e-34 127
Msa0133770 AT5G26660.2 71.622 74 21 0 45 118 14 87 1.53e-33 125
Msa0133770 AT3G47600.2 72.973 74 20 0 45 118 39 112 2.45e-33 125
Msa0133770 AT5G49620.2 41.899 179 80 3 8 172 22 190 4.85e-33 124
Msa0133770 AT5G14750.3 65.385 78 24 1 39 116 12 86 8.50e-33 119
Msa0133770 AT5G35550.2 64.706 85 25 1 45 124 50 134 6.16e-32 119
Msa0133770 AT3G60460.1 45.536 112 60 1 7 117 6 117 7.41e-32 120
Msa0133770 AT3G46130.3 57.955 88 37 0 38 125 3 90 9.82e-31 115
Msa0133770 AT5G59780.2 60.494 81 32 0 45 125 20 100 1.80e-30 114
Msa0133770 AT3G46130.4 60.494 81 32 0 45 125 20 100 2.96e-30 114
Msa0133770 AT3G27810.2 61.039 77 30 0 43 119 2 78 7.12e-30 112
Msa0133770 AT5G40350.2 62.667 75 28 0 45 119 5 79 5.84e-29 109
Msa0133770 AT3G53200.2 66.197 71 24 0 45 115 9 79 1.39e-28 109
Msa0133770 AT5G02320.1 48.544 103 52 1 14 116 127 228 1.60e-27 112
Msa0133770 AT5G02320.1 33.019 106 69 2 14 118 75 179 1.24e-12 68.6
Msa0133770 AT5G02320.2 48.544 103 52 1 14 116 127 228 1.60e-27 112
Msa0133770 AT5G02320.2 33.019 106 69 2 14 118 75 179 1.24e-12 68.6
Msa0133770 AT5G02320.3 48.544 103 52 1 14 116 67 168 1.64e-27 112
Msa0133770 AT5G02320.3 33.019 106 69 2 14 118 15 119 1.41e-12 68.2
Msa0133770 AT4G32730.5 45.631 103 55 1 14 116 87 188 6.21e-27 111
Msa0133770 AT4G32730.5 30.841 107 72 2 14 119 35 140 1.26e-11 65.9
Msa0133770 AT4G32730.4 45.631 103 55 1 14 116 87 188 6.21e-27 111
Msa0133770 AT4G32730.4 30.841 107 72 2 14 119 35 140 1.26e-11 65.9
Msa0133770 AT4G32730.3 45.631 103 55 1 14 116 87 188 6.21e-27 111
Msa0133770 AT4G32730.3 30.841 107 72 2 14 119 35 140 1.26e-11 65.9
Msa0133770 AT4G32730.2 45.631 103 55 1 14 116 87 188 6.21e-27 111
Msa0133770 AT4G32730.2 30.841 107 72 2 14 119 35 140 1.26e-11 65.9
Msa0133770 AT4G32730.1 45.631 103 55 1 14 116 87 188 6.62e-27 111
Msa0133770 AT4G32730.1 30.841 107 72 2 14 119 35 140 1.14e-11 65.9
Msa0133770 AT2G23290.1 50.980 102 49 1 14 115 13 113 7.14e-27 107
Msa0133770 AT3G27785.1 47.458 118 55 3 8 123 183 295 7.73e-27 109
Msa0133770 AT4G37260.1 49.020 102 51 1 14 115 13 113 2.52e-26 106
Msa0133770 AT2G39880.1 48.544 103 50 2 14 115 50 150 3.85e-26 106
Msa0133770 AT3G09230.1 48.113 106 46 2 14 115 55 155 5.08e-26 106
Msa0133770 AT3G23250.2 73.333 60 16 0 58 117 1 60 1.03e-25 102
Msa0133770 AT1G73410.1 47.009 117 56 3 14 129 6 117 1.12e-25 102
Msa0133770 AT4G33450.1 41.525 118 63 2 3 120 13 124 1.45e-25 102
Msa0133770 AT5G17800.1 43.636 110 61 1 14 123 93 201 1.68e-25 103
Msa0133770 AT1G69560.2 45.045 111 58 2 9 118 118 226 2.02e-25 104
Msa0133770 AT1G69560.1 45.045 111 58 2 9 118 102 210 2.03e-25 103
Msa0133770 AT5G67300.1 48.039 102 52 1 14 115 6 106 3.02e-25 103
Msa0133770 AT1G73410.2 47.009 117 56 3 14 129 6 117 3.64e-25 100
Msa0133770 AT5G40360.1 38.235 136 82 2 1 136 145 278 4.00e-25 103
Msa0133770 AT4G18770.1 42.149 121 64 3 8 125 211 328 6.31e-25 103
Msa0133770 AT3G09370.1 47.059 102 53 1 14 115 130 230 6.98e-25 104
Msa0133770 AT3G09370.2 47.059 102 53 1 14 115 135 235 7.08e-25 104
Msa0133770 AT1G26780.1 40.909 132 70 3 14 144 98 222 8.03e-25 101
Msa0133770 AT3G09370.3 47.170 106 47 2 14 115 143 243 9.00e-25 104
Msa0133770 AT1G66380.3 62.500 72 27 0 44 115 7 78 1.22e-24 95.9
Msa0133770 AT1G17950.1 46.226 106 54 2 14 118 5 108 1.62e-24 99.8
Msa0133770 AT5G11510.3 46.667 105 51 2 14 116 81 182 1.77e-24 103
Msa0133770 AT5G11510.3 32.075 106 70 2 14 118 29 133 6.10e-11 63.5
Msa0133770 AT5G11510.1 46.667 105 51 2 14 116 81 182 1.77e-24 103
Msa0133770 AT5G11510.1 32.075 106 70 2 14 118 29 133 6.10e-11 63.5
Msa0133770 AT5G11510.4 46.667 105 51 2 14 116 81 182 1.77e-24 103
Msa0133770 AT5G11510.4 32.075 106 70 2 14 118 29 133 6.10e-11 63.5
Msa0133770 AT5G11510.2 45.631 103 55 1 14 116 81 182 2.01e-24 103
Msa0133770 AT5G11510.2 32.075 106 70 2 14 118 29 133 4.92e-11 63.9
Msa0133770 AT1G26780.2 41.221 131 69 3 14 143 98 221 2.18e-24 101
Msa0133770 AT5G11510.5 45.631 103 55 1 14 116 81 182 2.22e-24 103
Msa0133770 AT5G11510.5 32.075 106 70 2 14 118 29 133 4.91e-11 63.9
Msa0133770 AT5G58850.1 41.860 129 70 3 14 141 105 229 3.42e-24 102
Msa0133770 AT3G55730.1 47.573 103 51 2 14 115 56 156 4.99e-24 101
Msa0133770 AT1G22640.3 66.102 59 20 0 58 116 1 59 5.84e-24 97.1
Msa0133770 AT3G50060.1 46.078 102 54 1 14 115 6 106 6.24e-24 99.4
Msa0133770 AT5G11050.1 41.732 127 65 4 12 137 103 221 1.01e-23 100
Msa0133770 AT5G14750.4 62.712 59 22 0 58 116 1 59 7.24e-23 92.4
Msa0133770 AT5G14750.2 62.712 59 22 0 58 116 1 59 7.24e-23 92.4
Msa0133770 AT1G66380.2 54.430 79 36 0 11 89 7 85 1.18e-21 88.2
Msa0133770 AT3G29020.1 40.000 105 62 1 14 118 65 168 1.66e-21 91.3
Msa0133770 AT1G18960.1 42.857 105 57 2 14 118 10 111 1.86e-21 92.8
Msa0133770 AT3G29020.2 40.000 105 62 1 14 118 67 170 3.39e-21 92.0
Msa0133770 AT2G25230.1 41.441 111 61 3 8 117 20 127 9.09e-21 89.4
Msa0133770 AT4G00540.2 42.727 110 59 2 12 118 101 209 1.99e-20 90.9
Msa0133770 AT1G71030.2 53.030 66 31 0 51 116 5 70 2.48e-20 86.7
Msa0133770 AT4G00540.1 42.727 110 59 2 12 118 99 207 3.07e-20 90.9
Msa0133770 AT1G71030.1 53.030 66 31 0 51 116 19 84 3.26e-20 87.0
Msa0133770 AT2G37630.1 39.815 108 63 1 13 118 3 110 3.40e-19 87.0
Msa0133770 AT5G15310.3 52.381 84 34 1 88 165 9 92 2.18e-18 83.2
Msa0133770 AT2G02820.3 33.987 153 80 5 8 143 27 175 1.60e-17 82.0
Msa0133770 AT2G02820.1 33.987 153 80 5 8 143 27 175 5.46e-17 81.3
Msa0133770 AT5G40430.1 36.036 111 68 3 7 117 47 154 8.09e-17 79.0
Msa0133770 AT2G02820.2 33.987 153 80 5 8 143 27 175 8.16e-17 80.9
Msa0133770 AT5G39700.1 34.615 104 67 1 15 118 57 159 5.09e-16 75.5
Msa0133770 AT1G14350.2 34.375 128 74 3 8 135 22 139 1.88e-15 76.6
Msa0133770 AT1G14350.1 34.375 128 74 3 8 135 22 139 1.88e-15 76.6
Msa0133770 AT5G59780.1 53.571 56 26 0 70 125 1 56 2.62e-15 72.8
Msa0133770 AT3G46130.2 53.571 56 26 0 70 125 1 56 5.24e-15 72.4
Msa0133770 AT3G28910.2 62.000 50 19 0 78 127 2 51 1.80e-14 72.0
Msa0133770 AT1G74650.3 76.923 39 9 0 78 116 2 40 3.04e-14 71.6
Msa0133770 AT4G25560.2 67.442 43 14 0 73 115 5 47 4.65e-14 70.5
Msa0133770 AT5G61420.1 71.053 38 11 0 81 118 2 39 5.68e-12 65.5
Msa0133770 AT4G28110.2 75.000 32 8 0 88 119 4 35 6.78e-11 61.2

Find 78 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGACACGTTTCTTTAAA+TGG 0.094066 1_3:+65097822 None:intergenic
GCTTTGGTGTCGACACTTTC+AGG 0.182498 1_3:+65097465 None:intergenic
AAGCTTCAGTTTGTAGTTAC+TGG 0.214754 1_3:+65097409 None:intergenic
ATCACTATCATCATCGAAAT+TGG 0.245454 1_3:-65097537 Msa0133770:CDS
GAGTCCACTTTGCTTAATTC+AGG 0.272638 1_3:-65097674 Msa0133770:CDS
TGAAGATGTTGACGTGATTC+AGG 0.278646 1_3:-65097441 Msa0133770:CDS
GATAGATCTGGTTCAGATTC+AGG 0.282629 1_3:-65097380 Msa0133770:CDS
TTGTTGTGAATTTATTACTA+TGG 0.292839 1_3:-65099449 Msa0133770:five_prime_UTR
CTGCGTATGCCTGATGAAAT+AGG 0.293386 1_3:-65097311 Msa0133770:CDS
ATCTCATTGTCTGTTCTTCC+TGG 0.294103 1_3:+65097863 None:intergenic
CTGATTACTTTCTTCAACTT+TGG 0.298456 1_3:-65097631 Msa0133770:CDS
CAACCCTTGCACTTTCCCAC+TGG 0.302795 1_3:+65097720 None:intergenic
GCCTGATGAAATAGGATTCC+TGG 0.344813 1_3:-65097303 Msa0133770:CDS
ACTAAAGCTTCATCTTCTTC+AGG 0.351058 1_3:+65099344 None:intergenic
TTGACAGTACCTGCATGTTT+AGG 0.374019 1_3:+65099278 None:intergenic
AATTTCTTGAATCTCCTTGA+TGG 0.383750 1_3:-65097269 Msa0133770:CDS
CCGGACACGTTTCTTTAAAT+GGG 0.388694 1_3:+65097823 None:intergenic
ACAATGAGATTAAGAACTAT+TGG 0.389201 1_3:-65097850 Msa0133770:CDS
TTAGACTGGGCATTCCTATC+AGG 0.389920 1_3:+65097767 None:intergenic
AACCCTTGCACTTTCCCACT+GGG 0.410798 1_3:+65097721 None:intergenic
GCGGCAAAAGTTGCCGGCTT+CGG 0.411394 1_3:-65098155 Msa0133770:CDS
TAAGATGCGGCAAAAGTTGC+CGG 0.416041 1_3:-65098161 Msa0133770:CDS
CAACTTTGGCATTCTGATGT+TGG 0.417033 1_3:-65097617 Msa0133770:CDS
TGGGCCATGTGGCGTGTAGA+AGG 0.420239 1_3:+65097740 None:intergenic
CAAAGTTGAAGAAAGTAATC+AGG 0.443367 1_3:+65097632 None:intergenic
ATGTTCAGATGTCTCATTGC+AGG 0.446382 1_3:-65097510 Msa0133770:CDS
ATCCATGTCTCCTTCCTGAT+AGG 0.449112 1_3:-65097781 Msa0133770:CDS
TTCATGCCATGCTTGGCAAC+AGG 0.452030 1_3:-65098059 Msa0133770:intron
CCCAGGAATCCTATTTCATC+AGG 0.453232 1_3:+65097302 None:intergenic
AACGTGTCCGGCAGTCACTA+AGG 0.458737 1_3:-65097811 Msa0133770:CDS
ACGTCAACATCTTCAAGCTT+TGG 0.459604 1_3:+65097449 None:intergenic
ATTCAACTTCATGCCATGCT+TGG 0.464130 1_3:-65098066 Msa0133770:CDS
GTGTAGAAGGAGAATTAGAC+TGG 0.475010 1_3:+65097753 None:intergenic
GATAGTTTATCCACCGAAGC+CGG 0.479363 1_3:+65098142 None:intergenic
GTGAATTTATTACTATGGTT+TGG 0.487429 1_3:-65099444 Msa0133770:five_prime_UTR
ACAAACATGGCCATGGGAGT+TGG 0.494826 1_3:-65099310 Msa0133770:CDS
AATGAGCCACGCTTGATGCC+AGG 0.516151 1_3:+65098114 None:intergenic
AAGCTTGAAGATGATAGATC+TGG 0.524702 1_3:-65097392 Msa0133770:CDS
GCAAAAGTTGCCGGCTTCGG+TGG 0.528545 1_3:-65098152 Msa0133770:CDS
CCTGATGAAATAGGATTCCT+GGG 0.529222 1_3:-65097302 Msa0133770:CDS
AGCAGAGACGAGGCTGTCGT+TGG 0.533698 1_3:-65097696 Msa0133770:CDS
TGGATAAACTATCTCCGTCC+TGG 0.539879 1_3:-65098132 Msa0133770:CDS
CCCATTTAAAGAAACGTGTC+CGG 0.543989 1_3:-65097823 Msa0133770:CDS
CACTTTCCCACTGGGCCATG+TGG 0.548011 1_3:+65097729 None:intergenic
GCTATAGCAGCTCAACTACC+AGG 0.548333 1_3:-65097881 Msa0133770:CDS
TACATCAACAAACATGGCCA+TGG 0.548377 1_3:-65099317 Msa0133770:CDS
ACCCCATGTTTCTCACAACA+AGG 0.549162 1_3:+65099386 None:intergenic
TGGCCCAGTGGGAAAGTGCA+AGG 0.553498 1_3:-65097724 Msa0133770:CDS
AGAAATTGTCAGTATGTCCC+AGG 0.567136 1_3:+65097285 None:intergenic
ATGGGGTGAAAAGAGGAGCT+TGG 0.568068 1_3:-65099370 Msa0133770:CDS
CCCATGTTTCTCACAACAAG+GGG 0.570733 1_3:+65099388 None:intergenic
TTCCTATCAGGAAGGAGACA+TGG 0.573818 1_3:+65097779 None:intergenic
CTTAGTCACATCTACCATCA+AGG 0.575358 1_3:+65097255 None:intergenic
GTTGGAGAGAAATTTCGAGC+AGG 0.578155 1_3:-65097599 Msa0133770:CDS
GAAGAGTACGCCAACTCCCA+TGG 0.579178 1_3:+65099300 None:intergenic
GAGAAACATGGGGTGAAAAG+AGG 0.581259 1_3:-65099377 Msa0133770:CDS
CCCCTTGTTGTGAGAAACAT+GGG 0.582114 1_3:-65099388 Msa0133770:CDS
ACTATGGTTTGGTAATGAGT+TGG 0.582595 1_3:-65099433 Msa0133770:five_prime_UTR
ACGTGTCCGGCAGTCACTAA+GGG 0.585904 1_3:-65097810 Msa0133770:CDS
GAGGTACCTGTTGCCAAGCA+TGG 0.589470 1_3:+65098053 None:intergenic
TTCTCCTTCTACACGCCACA+TGG 0.594285 1_3:-65097744 Msa0133770:CDS
CTCCGTCCTGGCATCAAGCG+TGG 0.596733 1_3:-65098120 Msa0133770:CDS
TACACGCCACATGGCCCAGT+GGG 0.601016 1_3:-65097735 Msa0133770:CDS
CGTACTCTTCCTAAACATGC+AGG 0.602783 1_3:-65099287 Msa0133770:intron
GCCCCTTGTTGTGAGAAACA+TGG 0.603365 1_3:-65099389 Msa0133770:CDS
CCCCATGTTTCTCACAACAA+GGG 0.611520 1_3:+65099387 None:intergenic
GGCCCAGTGGGAAAGTGCAA+GGG 0.612508 1_3:-65097723 Msa0133770:CDS
CAAGGGTTGAAGCAGAGACG+AGG 0.615393 1_3:-65097706 Msa0133770:CDS
AGAGCCTGAATTAAGCAAAG+TGG 0.615810 1_3:+65097670 None:intergenic
TTTCATCAGGCATACGCAGT+AGG 0.616891 1_3:+65097315 None:intergenic
ACATCAACAAACATGGCCAT+GGG 0.633448 1_3:-65099316 Msa0133770:CDS
AGCCACGCTTGATGCCAGGA+CGG 0.639664 1_3:+65098118 None:intergenic
GTTGACTACATCAACAAACA+TGG 0.659740 1_3:-65099323 Msa0133770:CDS
ACTGGGCATTCCTATCAGGA+AGG 0.663389 1_3:+65097771 None:intergenic
CAAGTAGGTCTCCTAAGATG+CGG 0.668531 1_3:-65098174 Msa0133770:intron
TGTAGAAGGAGAATTAGACT+GGG 0.703666 1_3:+65097754 None:intergenic
CTACACGCCACATGGCCCAG+TGG 0.712167 1_3:-65097736 Msa0133770:CDS
CCCTTGTTGTGAGAAACATG+GGG 0.801692 1_3:-65099387 Msa0133770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAGATTCTTAATACA+CGG + chr1_3:65097744-65097763 None:intergenic 15.0%
!!! AATTTTAGATTCTTAATACA+CGG + chr1_3:65097744-65097763 None:intergenic 15.0%
!! TTGTTGTGAATTTATTACTA+TGG - chr1_3:65097295-65097314 Msa0133770:CDS 20.0%
!!! CAAAACAAAACTTTTACAAT+AGG + chr1_3:65098159-65098178 None:intergenic 20.0%
!! TTGTTGTGAATTTATTACTA+TGG - chr1_3:65097295-65097314 Msa0133770:CDS 20.0%
!!! CAAAACAAAACTTTTACAAT+AGG + chr1_3:65098159-65098178 None:intergenic 20.0%
! GTGAATTTATTACTATGGTT+TGG - chr1_3:65097300-65097319 Msa0133770:CDS 25.0%
!!! TTTGGAATATTTTGAAGCTA+AGG - chr1_3:65097570-65097589 Msa0133770:CDS 25.0%
! CTAAGGAAGAATATTTAGTA+TGG - chr1_3:65097587-65097606 Msa0133770:CDS 25.0%
!!! TTAGTTTTCATACTCTTCAA+GGG - chr1_3:65097655-65097674 Msa0133770:CDS 25.0%
!!! TCAAGGGTTTTGAATATTAA+CGG - chr1_3:65097671-65097690 Msa0133770:CDS 25.0%
! CTTGTTTAGCAGAAAAATAT+TGG + chr1_3:65097775-65097794 None:intergenic 25.0%
! TCATCATGAATAAAACCTTA+TGG - chr1_3:65097884-65097903 Msa0133770:CDS 25.0%
! AATTGACCTAACCAAAATTT+AGG - chr1_3:65098037-65098056 Msa0133770:intron 25.0%
! ATTGACCTAACCAAAATTTA+GGG - chr1_3:65098038-65098057 Msa0133770:intron 25.0%
! TAATAATAACCTATTGAGAG+AGG + chr1_3:65098085-65098104 None:intergenic 25.0%
!! AGTTATACTTTTCCTTATCT+CGG + chr1_3:65098368-65098387 None:intergenic 25.0%
! TTATATTGATCTGACACTTA+TGG - chr1_3:65098431-65098450 Msa0133770:intron 25.0%
! TATGTATGTTTACAACAAGT+AGG - chr1_3:65098555-65098574 Msa0133770:intron 25.0%
! ACAATGAGATTAAGAACTAT+TGG - chr1_3:65098894-65098913 Msa0133770:intron 25.0%
! GTGAATTTATTACTATGGTT+TGG - chr1_3:65097300-65097319 Msa0133770:CDS 25.0%
!!! TTTGGAATATTTTGAAGCTA+AGG - chr1_3:65097570-65097589 Msa0133770:CDS 25.0%
! CTAAGGAAGAATATTTAGTA+TGG - chr1_3:65097587-65097606 Msa0133770:CDS 25.0%
!!! TTAGTTTTCATACTCTTCAA+GGG - chr1_3:65097655-65097674 Msa0133770:CDS 25.0%
!!! TCAAGGGTTTTGAATATTAA+CGG - chr1_3:65097671-65097690 Msa0133770:CDS 25.0%
! CTTGTTTAGCAGAAAAATAT+TGG + chr1_3:65097775-65097794 None:intergenic 25.0%
! TCATCATGAATAAAACCTTA+TGG - chr1_3:65097884-65097903 Msa0133770:CDS 25.0%
! AATTGACCTAACCAAAATTT+AGG - chr1_3:65098037-65098056 Msa0133770:intron 25.0%
! ATTGACCTAACCAAAATTTA+GGG - chr1_3:65098038-65098057 Msa0133770:intron 25.0%
! TAATAATAACCTATTGAGAG+AGG + chr1_3:65098085-65098104 None:intergenic 25.0%
!! AGTTATACTTTTCCTTATCT+CGG + chr1_3:65098368-65098387 None:intergenic 25.0%
! TTATATTGATCTGACACTTA+TGG - chr1_3:65098431-65098450 Msa0133770:intron 25.0%
! TATGTATGTTTACAACAAGT+AGG - chr1_3:65098555-65098574 Msa0133770:intron 25.0%
! ACAATGAGATTAAGAACTAT+TGG - chr1_3:65098894-65098913 Msa0133770:intron 25.0%
!! AGTTGGTGAAAGTGAAAAAT+GGG - chr1_3:65097328-65097347 Msa0133770:CDS 30.0%
!! CTTAGTTTTCATACTCTTCA+AGG - chr1_3:65097654-65097673 Msa0133770:CDS 30.0%
CTATAAGCTTACTACTTTGA+AGG - chr1_3:65097826-65097845 Msa0133770:CDS 30.0%
! CATAACAAGTCCCTAAATTT+TGG + chr1_3:65098051-65098070 None:intergenic 30.0%
!! CAAAATTTAGGGACTTGTTA+TGG - chr1_3:65098049-65098068 Msa0133770:intron 30.0%
TGTGAAATGTATAACAGTTG+AGG - chr1_3:65098121-65098140 Msa0133770:CDS 30.0%
GGACAATTGCAACAAATTTA+AGG + chr1_3:65098245-65098264 None:intergenic 30.0%
!! TTGAGATTGAGTTGGTTTAA+AGG + chr1_3:65098266-65098285 None:intergenic 30.0%
AATCTTGTCTTAAATAGACC+CGG - chr1_3:65098284-65098303 Msa0133770:intron 30.0%
ATGTTAACTCTTTGCATACA+TGG + chr1_3:65098484-65098503 None:intergenic 30.0%
CAGTGTCAAGAAAAATTTGT+TGG - chr1_3:65098785-65098804 Msa0133770:intron 30.0%
GATAACTATGCTATCTTTCT+AGG - chr1_3:65098834-65098853 Msa0133770:intron 30.0%
CAAAGTTGAAGAAAGTAATC+AGG + chr1_3:65099115-65099134 None:intergenic 30.0%
CTGATTACTTTCTTCAACTT+TGG - chr1_3:65099113-65099132 Msa0133770:intron 30.0%
ATCACTATCATCATCGAAAT+TGG - chr1_3:65099207-65099226 Msa0133770:intron 30.0%
AATTTCTTGAATCTCCTTGA+TGG - chr1_3:65099475-65099494 Msa0133770:five_prime_UTR 30.0%
!! AGTTGGTGAAAGTGAAAAAT+GGG - chr1_3:65097328-65097347 Msa0133770:CDS 30.0%
!! CTTAGTTTTCATACTCTTCA+AGG - chr1_3:65097654-65097673 Msa0133770:CDS 30.0%
CTATAAGCTTACTACTTTGA+AGG - chr1_3:65097826-65097845 Msa0133770:CDS 30.0%
! CATAACAAGTCCCTAAATTT+TGG + chr1_3:65098051-65098070 None:intergenic 30.0%
!! CAAAATTTAGGGACTTGTTA+TGG - chr1_3:65098049-65098068 Msa0133770:intron 30.0%
TGTGAAATGTATAACAGTTG+AGG - chr1_3:65098121-65098140 Msa0133770:CDS 30.0%
GGACAATTGCAACAAATTTA+AGG + chr1_3:65098245-65098264 None:intergenic 30.0%
!! TTGAGATTGAGTTGGTTTAA+AGG + chr1_3:65098266-65098285 None:intergenic 30.0%
AATCTTGTCTTAAATAGACC+CGG - chr1_3:65098284-65098303 Msa0133770:intron 30.0%
ATGTTAACTCTTTGCATACA+TGG + chr1_3:65098484-65098503 None:intergenic 30.0%
CAGTGTCAAGAAAAATTTGT+TGG - chr1_3:65098785-65098804 Msa0133770:intron 30.0%
GATAACTATGCTATCTTTCT+AGG - chr1_3:65098834-65098853 Msa0133770:intron 30.0%
CAAAGTTGAAGAAAGTAATC+AGG + chr1_3:65099115-65099134 None:intergenic 30.0%
CTGATTACTTTCTTCAACTT+TGG - chr1_3:65099113-65099132 Msa0133770:intron 30.0%
ATCACTATCATCATCGAAAT+TGG - chr1_3:65099207-65099226 Msa0133770:intron 30.0%
AATTTCTTGAATCTCCTTGA+TGG - chr1_3:65099475-65099494 Msa0133770:five_prime_UTR 30.0%
!! ACTATGGTTTGGTAATGAGT+TGG - chr1_3:65097311-65097330 Msa0133770:CDS 35.0%
!! GAGTTGGTGAAAGTGAAAAA+TGG - chr1_3:65097327-65097346 Msa0133770:CDS 35.0%
ACTAAAGCTTCATCTTCTTC+AGG + chr1_3:65097403-65097422 None:intergenic 35.0%
GTTGACTACATCAACAAACA+TGG - chr1_3:65097421-65097440 Msa0133770:CDS 35.0%
CCAAAAGTTCACAGAAAGAA+AGG + chr1_3:65097555-65097574 None:intergenic 35.0%
! CCTTTCTTTCTGTGAACTTT+TGG - chr1_3:65097552-65097571 Msa0133770:CDS 35.0%
!!! CAAGTCCCTAAATTTTGGTT+AGG + chr1_3:65098046-65098065 None:intergenic 35.0%
! GAAGTATTACCTCTCTCAAT+AGG - chr1_3:65098073-65098092 Msa0133770:CDS 35.0%
GAAATGTATAACAGTTGAGG+TGG - chr1_3:65098124-65098143 Msa0133770:CDS 35.0%
!!! TTGTTTTGAGTTTGAATGCG+TGG - chr1_3:65098171-65098190 Msa0133770:intron 35.0%
AGACAAGATTGAGATTGAGT+TGG + chr1_3:65098274-65098293 None:intergenic 35.0%
TCTAAAGAATGACCGAGATA+AGG - chr1_3:65098353-65098372 Msa0133770:intron 35.0%
AGTTTGACCTAGTAATCTCA+AGG + chr1_3:65098410-65098429 None:intergenic 35.0%
GCAACACATTTAGTTACTGT+AGG + chr1_3:65098462-65098481 None:intergenic 35.0%
TCAACTCATCTTAGTCCTAA+AGG - chr1_3:65098726-65098745 Msa0133770:intron 35.0%
TATGAGTGGAATGAACCTTT+AGG + chr1_3:65098744-65098763 None:intergenic 35.0%
TTTACTAAGCAGGTTATGAG+TGG + chr1_3:65098758-65098777 None:intergenic 35.0%
AACTATGCTATCTTTCTAGG+TGG - chr1_3:65098837-65098856 Msa0133770:intron 35.0%
ACTATGCTATCTTTCTAGGT+GGG - chr1_3:65098838-65098857 Msa0133770:intron 35.0%
TGTAGAAGGAGAATTAGACT+GGG + chr1_3:65098993-65099012 None:intergenic 35.0%
AAGCTTCAGTTTGTAGTTAC+TGG + chr1_3:65099338-65099357 None:intergenic 35.0%
AAGCTTGAAGATGATAGATC+TGG - chr1_3:65099352-65099371 Msa0133770:CDS 35.0%
!! ACTATGGTTTGGTAATGAGT+TGG - chr1_3:65097311-65097330 Msa0133770:CDS 35.0%
!! GAGTTGGTGAAAGTGAAAAA+TGG - chr1_3:65097327-65097346 Msa0133770:CDS 35.0%
ACTAAAGCTTCATCTTCTTC+AGG + chr1_3:65097403-65097422 None:intergenic 35.0%
GTTGACTACATCAACAAACA+TGG - chr1_3:65097421-65097440 Msa0133770:CDS 35.0%
CCAAAAGTTCACAGAAAGAA+AGG + chr1_3:65097555-65097574 None:intergenic 35.0%
! CCTTTCTTTCTGTGAACTTT+TGG - chr1_3:65097552-65097571 Msa0133770:CDS 35.0%
!!! CAAGTCCCTAAATTTTGGTT+AGG + chr1_3:65098046-65098065 None:intergenic 35.0%
! GAAGTATTACCTCTCTCAAT+AGG - chr1_3:65098073-65098092 Msa0133770:CDS 35.0%
GAAATGTATAACAGTTGAGG+TGG - chr1_3:65098124-65098143 Msa0133770:CDS 35.0%
!!! TTGTTTTGAGTTTGAATGCG+TGG - chr1_3:65098171-65098190 Msa0133770:intron 35.0%
AGACAAGATTGAGATTGAGT+TGG + chr1_3:65098274-65098293 None:intergenic 35.0%
TCTAAAGAATGACCGAGATA+AGG - chr1_3:65098353-65098372 Msa0133770:intron 35.0%
AGTTTGACCTAGTAATCTCA+AGG + chr1_3:65098410-65098429 None:intergenic 35.0%
GCAACACATTTAGTTACTGT+AGG + chr1_3:65098462-65098481 None:intergenic 35.0%
TCAACTCATCTTAGTCCTAA+AGG - chr1_3:65098726-65098745 Msa0133770:intron 35.0%
TATGAGTGGAATGAACCTTT+AGG + chr1_3:65098744-65098763 None:intergenic 35.0%
TTTACTAAGCAGGTTATGAG+TGG + chr1_3:65098758-65098777 None:intergenic 35.0%
AACTATGCTATCTTTCTAGG+TGG - chr1_3:65098837-65098856 Msa0133770:intron 35.0%
ACTATGCTATCTTTCTAGGT+GGG - chr1_3:65098838-65098857 Msa0133770:intron 35.0%
TGTAGAAGGAGAATTAGACT+GGG + chr1_3:65098993-65099012 None:intergenic 35.0%
AAGCTTCAGTTTGTAGTTAC+TGG + chr1_3:65099338-65099357 None:intergenic 35.0%
AAGCTTGAAGATGATAGATC+TGG - chr1_3:65099352-65099371 Msa0133770:CDS 35.0%
TACATCAACAAACATGGCCA+TGG - chr1_3:65097427-65097446 Msa0133770:CDS 40.0%
ACATCAACAAACATGGCCAT+GGG - chr1_3:65097428-65097447 Msa0133770:CDS 40.0%
TTGACAGTACCTGCATGTTT+AGG + chr1_3:65097469-65097488 None:intergenic 40.0%
AACATGCTGAAATTGCTGCT+AGG + chr1_3:65097928-65097947 None:intergenic 40.0%
ATTTCAGCATGTTTCCCTTG+AGG - chr1_3:65097935-65097954 Msa0133770:intron 40.0%
TGACCTAGTAATCTCAAGGT+AGG + chr1_3:65098406-65098425 None:intergenic 40.0%
GACAGTGTATCAGAGAAAGA+TGG - chr1_3:65098506-65098525 Msa0133770:intron 40.0%
ATTCAACTTCATGCCATGCT+TGG - chr1_3:65098678-65098697 Msa0133770:intron 40.0%
!! GAGTTGATAATAGAGCAGTG+AGG + chr1_3:65098713-65098732 None:intergenic 40.0%
CTGCAATGCATTTACTAAGC+AGG + chr1_3:65098768-65098787 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+TGG + chr1_3:65098884-65098903 None:intergenic 40.0%
CCGGACACGTTTCTTTAAAT+GGG + chr1_3:65098924-65098943 None:intergenic 40.0%
CCCATTTAAAGAAACGTGTC+CGG - chr1_3:65098921-65098940 Msa0133770:intron 40.0%
GTGTAGAAGGAGAATTAGAC+TGG + chr1_3:65098994-65099013 None:intergenic 40.0%
GAGTCCACTTTGCTTAATTC+AGG - chr1_3:65099070-65099089 Msa0133770:intron 40.0%
AGAGCCTGAATTAAGCAAAG+TGG + chr1_3:65099077-65099096 None:intergenic 40.0%
CAACTTTGGCATTCTGATGT+TGG - chr1_3:65099127-65099146 Msa0133770:intron 40.0%
ATGTTCAGATGTCTCATTGC+AGG - chr1_3:65099234-65099253 Msa0133770:intron 40.0%
ACGTCAACATCTTCAAGCTT+TGG + chr1_3:65099298-65099317 None:intergenic 40.0%
TGAAGATGTTGACGTGATTC+AGG - chr1_3:65099303-65099322 Msa0133770:CDS 40.0%
! GATAGATCTGGTTCAGATTC+AGG - chr1_3:65099364-65099383 Msa0133770:CDS 40.0%
CCTGATGAAATAGGATTCCT+GGG - chr1_3:65099442-65099461 Msa0133770:five_prime_UTR 40.0%
AGAAATTGTCAGTATGTCCC+AGG + chr1_3:65099462-65099481 None:intergenic 40.0%
TACATCAACAAACATGGCCA+TGG - chr1_3:65097427-65097446 Msa0133770:CDS 40.0%
ACATCAACAAACATGGCCAT+GGG - chr1_3:65097428-65097447 Msa0133770:CDS 40.0%
TTGACAGTACCTGCATGTTT+AGG + chr1_3:65097469-65097488 None:intergenic 40.0%
AACATGCTGAAATTGCTGCT+AGG + chr1_3:65097928-65097947 None:intergenic 40.0%
ATTTCAGCATGTTTCCCTTG+AGG - chr1_3:65097935-65097954 Msa0133770:intron 40.0%
TGACCTAGTAATCTCAAGGT+AGG + chr1_3:65098406-65098425 None:intergenic 40.0%
GACAGTGTATCAGAGAAAGA+TGG - chr1_3:65098506-65098525 Msa0133770:intron 40.0%
ATTCAACTTCATGCCATGCT+TGG - chr1_3:65098678-65098697 Msa0133770:intron 40.0%
!! GAGTTGATAATAGAGCAGTG+AGG + chr1_3:65098713-65098732 None:intergenic 40.0%
CTGCAATGCATTTACTAAGC+AGG + chr1_3:65098768-65098787 None:intergenic 40.0%
ATCTCATTGTCTGTTCTTCC+TGG + chr1_3:65098884-65098903 None:intergenic 40.0%
CCGGACACGTTTCTTTAAAT+GGG + chr1_3:65098924-65098943 None:intergenic 40.0%
CCCATTTAAAGAAACGTGTC+CGG - chr1_3:65098921-65098940 Msa0133770:intron 40.0%
GTGTAGAAGGAGAATTAGAC+TGG + chr1_3:65098994-65099013 None:intergenic 40.0%
GAGTCCACTTTGCTTAATTC+AGG - chr1_3:65099070-65099089 Msa0133770:intron 40.0%
AGAGCCTGAATTAAGCAAAG+TGG + chr1_3:65099077-65099096 None:intergenic 40.0%
CAACTTTGGCATTCTGATGT+TGG - chr1_3:65099127-65099146 Msa0133770:intron 40.0%
ATGTTCAGATGTCTCATTGC+AGG - chr1_3:65099234-65099253 Msa0133770:intron 40.0%
ACGTCAACATCTTCAAGCTT+TGG + chr1_3:65099298-65099317 None:intergenic 40.0%
TGAAGATGTTGACGTGATTC+AGG - chr1_3:65099303-65099322 Msa0133770:CDS 40.0%
! GATAGATCTGGTTCAGATTC+AGG - chr1_3:65099364-65099383 Msa0133770:CDS 40.0%
CCTGATGAAATAGGATTCCT+GGG - chr1_3:65099442-65099461 Msa0133770:five_prime_UTR 40.0%
AGAAATTGTCAGTATGTCCC+AGG + chr1_3:65099462-65099481 None:intergenic 40.0%
CCCATGTTTCTCACAACAAG+GGG + chr1_3:65097359-65097378 None:intergenic 45.0%
! CCCCTTGTTGTGAGAAACAT+GGG - chr1_3:65097356-65097375 Msa0133770:CDS 45.0%
CCCCATGTTTCTCACAACAA+GGG + chr1_3:65097360-65097379 None:intergenic 45.0%
! CCCTTGTTGTGAGAAACATG+GGG - chr1_3:65097357-65097376 Msa0133770:CDS 45.0%
ACCCCATGTTTCTCACAACA+AGG + chr1_3:65097361-65097380 None:intergenic 45.0%
GAGAAACATGGGGTGAAAAG+AGG - chr1_3:65097367-65097386 Msa0133770:CDS 45.0%
CGTACTCTTCCTAAACATGC+AGG - chr1_3:65097457-65097476 Msa0133770:CDS 45.0%
ACACAACTGGAGCAACCATA+AGG + chr1_3:65097902-65097921 None:intergenic 45.0%
TGCTGCTAGGAAAACACAAC+TGG + chr1_3:65097915-65097934 None:intergenic 45.0%
AAACCCAGACATGCTGATAC+GGG + chr1_3:65097985-65098004 None:intergenic 45.0%
CAAACCCAGACATGCTGATA+CGG + chr1_3:65097986-65098005 None:intergenic 45.0%
! TCAGCATGTCTGGGTTTGTT+CGG - chr1_3:65097988-65098007 Msa0133770:intron 45.0%
TTCGGGTCTAGCAATGAGTT+AGG - chr1_3:65098006-65098025 Msa0133770:intron 45.0%
TCGGGTCTAGCAATGAGTTA+GGG - chr1_3:65098007-65098026 Msa0133770:intron 45.0%
! ATCGGGTTTGTTCGTGTCTA+GGG - chr1_3:65098316-65098335 Msa0133770:intron 45.0%
GCTCCTACCTTGAGATTACT+AGG - chr1_3:65098400-65098419 Msa0133770:intron 45.0%
CAAGTAGGTCTCCTAAGATG+CGG - chr1_3:65098570-65098589 Msa0133770:intron 45.0%
TAAGATGCGGCAAAAGTTGC+CGG - chr1_3:65098583-65098602 Msa0133770:intron 45.0%
GATAGTTTATCCACCGAAGC+CGG + chr1_3:65098605-65098624 None:intergenic 45.0%
TGGATAAACTATCTCCGTCC+TGG - chr1_3:65098612-65098631 Msa0133770:intron 45.0%
GCCGGACACGTTTCTTTAAA+TGG + chr1_3:65098925-65098944 None:intergenic 45.0%
! GTTTTTCCCTTAGTGACTGC+CGG + chr1_3:65098943-65098962 None:intergenic 45.0%
ATCCATGTCTCCTTCCTGAT+AGG - chr1_3:65098963-65098982 Msa0133770:intron 45.0%
TTCCTATCAGGAAGGAGACA+TGG + chr1_3:65098968-65098987 None:intergenic 45.0%
TTAGACTGGGCATTCCTATC+AGG + chr1_3:65098980-65098999 None:intergenic 45.0%
GTTGGAGAGAAATTTCGAGC+AGG - chr1_3:65099145-65099164 Msa0133770:intron 45.0%
TTTCATCAGGCATACGCAGT+AGG + chr1_3:65099432-65099451 None:intergenic 45.0%
CTGCGTATGCCTGATGAAAT+AGG - chr1_3:65099433-65099452 Msa0133770:five_prime_UTR 45.0%
GCCTGATGAAATAGGATTCC+TGG - chr1_3:65099441-65099460 Msa0133770:five_prime_UTR 45.0%
CCCAGGAATCCTATTTCATC+AGG + chr1_3:65099445-65099464 None:intergenic 45.0%
CCCATGTTTCTCACAACAAG+GGG + chr1_3:65097359-65097378 None:intergenic 45.0%
! CCCCTTGTTGTGAGAAACAT+GGG - chr1_3:65097356-65097375 Msa0133770:CDS 45.0%
CCCCATGTTTCTCACAACAA+GGG + chr1_3:65097360-65097379 None:intergenic 45.0%
! CCCTTGTTGTGAGAAACATG+GGG - chr1_3:65097357-65097376 Msa0133770:CDS 45.0%
ACCCCATGTTTCTCACAACA+AGG + chr1_3:65097361-65097380 None:intergenic 45.0%
GAGAAACATGGGGTGAAAAG+AGG - chr1_3:65097367-65097386 Msa0133770:CDS 45.0%
CGTACTCTTCCTAAACATGC+AGG - chr1_3:65097457-65097476 Msa0133770:CDS 45.0%
ACACAACTGGAGCAACCATA+AGG + chr1_3:65097902-65097921 None:intergenic 45.0%
TGCTGCTAGGAAAACACAAC+TGG + chr1_3:65097915-65097934 None:intergenic 45.0%
AAACCCAGACATGCTGATAC+GGG + chr1_3:65097985-65098004 None:intergenic 45.0%
CAAACCCAGACATGCTGATA+CGG + chr1_3:65097986-65098005 None:intergenic 45.0%
! TCAGCATGTCTGGGTTTGTT+CGG - chr1_3:65097988-65098007 Msa0133770:intron 45.0%
TTCGGGTCTAGCAATGAGTT+AGG - chr1_3:65098006-65098025 Msa0133770:intron 45.0%
TCGGGTCTAGCAATGAGTTA+GGG - chr1_3:65098007-65098026 Msa0133770:intron 45.0%
! ATCGGGTTTGTTCGTGTCTA+GGG - chr1_3:65098316-65098335 Msa0133770:intron 45.0%
GCTCCTACCTTGAGATTACT+AGG - chr1_3:65098400-65098419 Msa0133770:intron 45.0%
CAAGTAGGTCTCCTAAGATG+CGG - chr1_3:65098570-65098589 Msa0133770:intron 45.0%
TAAGATGCGGCAAAAGTTGC+CGG - chr1_3:65098583-65098602 Msa0133770:intron 45.0%
GATAGTTTATCCACCGAAGC+CGG + chr1_3:65098605-65098624 None:intergenic 45.0%
TGGATAAACTATCTCCGTCC+TGG - chr1_3:65098612-65098631 Msa0133770:intron 45.0%
GCCGGACACGTTTCTTTAAA+TGG + chr1_3:65098925-65098944 None:intergenic 45.0%
! GTTTTTCCCTTAGTGACTGC+CGG + chr1_3:65098943-65098962 None:intergenic 45.0%
ATCCATGTCTCCTTCCTGAT+AGG - chr1_3:65098963-65098982 Msa0133770:intron 45.0%
TTCCTATCAGGAAGGAGACA+TGG + chr1_3:65098968-65098987 None:intergenic 45.0%
TTAGACTGGGCATTCCTATC+AGG + chr1_3:65098980-65098999 None:intergenic 45.0%
GTTGGAGAGAAATTTCGAGC+AGG - chr1_3:65099145-65099164 Msa0133770:intron 45.0%
TTTCATCAGGCATACGCAGT+AGG + chr1_3:65099432-65099451 None:intergenic 45.0%
CTGCGTATGCCTGATGAAAT+AGG - chr1_3:65099433-65099452 Msa0133770:five_prime_UTR 45.0%
GCCTGATGAAATAGGATTCC+TGG - chr1_3:65099441-65099460 Msa0133770:five_prime_UTR 45.0%
CCCAGGAATCCTATTTCATC+AGG + chr1_3:65099445-65099464 None:intergenic 45.0%
! GCCCCTTGTTGTGAGAAACA+TGG - chr1_3:65097355-65097374 Msa0133770:CDS 50.0%
ATGGGGTGAAAAGAGGAGCT+TGG - chr1_3:65097374-65097393 Msa0133770:CDS 50.0%
ACAAACATGGCCATGGGAGT+TGG - chr1_3:65097434-65097453 Msa0133770:CDS 50.0%
CAGCATGTTTCCCTTGAGGT+AGG - chr1_3:65097939-65097958 Msa0133770:intron 50.0%
ACATGCTGATACGGGTCTTC+GGG + chr1_3:65097977-65097996 None:intergenic 50.0%
GACATGCTGATACGGGTCTT+CGG + chr1_3:65097978-65097997 None:intergenic 50.0%
AAGACCCGTATCAGCATGTC+TGG - chr1_3:65097978-65097997 Msa0133770:intron 50.0%
AGACCCGTATCAGCATGTCT+GGG - chr1_3:65097979-65097998 Msa0133770:intron 50.0%
! CAGCATGTCTGGGTTTGTTC+GGG - chr1_3:65097989-65098008 Msa0133770:intron 50.0%
! CATCGGGTTTGTTCGTGTCT+AGG - chr1_3:65098315-65098334 Msa0133770:intron 50.0%
TGTCTAGGGACGACGAGTTT+GGG - chr1_3:65098330-65098349 Msa0133770:intron 50.0%
CTCAAGGTAGGAGCGAACAA+GGG + chr1_3:65098394-65098413 None:intergenic 50.0%
TCTCAAGGTAGGAGCGAACA+AGG + chr1_3:65098395-65098414 None:intergenic 50.0%
! GGCAACTTTTGCCGCATCTT+AGG + chr1_3:65098584-65098603 None:intergenic 50.0%
TTCATGCCATGCTTGGCAAC+AGG - chr1_3:65098685-65098704 Msa0133770:intron 50.0%
GCTATAGCAGCTCAACTACC+AGG - chr1_3:65098863-65098882 Msa0133770:intron 50.0%
ACTGGGCATTCCTATCAGGA+AGG + chr1_3:65098976-65098995 None:intergenic 50.0%
TTCTCCTTCTACACGCCACA+TGG - chr1_3:65099000-65099019 Msa0133770:intron 50.0%
AACCCTTGCACTTTCCCACT+GGG + chr1_3:65099026-65099045 None:intergenic 50.0%
!! GCTTTGGTGTCGACACTTTC+AGG + chr1_3:65099282-65099301 None:intergenic 50.0%
! GCCCCTTGTTGTGAGAAACA+TGG - chr1_3:65097355-65097374 Msa0133770:CDS 50.0%
ATGGGGTGAAAAGAGGAGCT+TGG - chr1_3:65097374-65097393 Msa0133770:CDS 50.0%
ACAAACATGGCCATGGGAGT+TGG - chr1_3:65097434-65097453 Msa0133770:CDS 50.0%
CAGCATGTTTCCCTTGAGGT+AGG - chr1_3:65097939-65097958 Msa0133770:intron 50.0%
ACATGCTGATACGGGTCTTC+GGG + chr1_3:65097977-65097996 None:intergenic 50.0%
GACATGCTGATACGGGTCTT+CGG + chr1_3:65097978-65097997 None:intergenic 50.0%
AAGACCCGTATCAGCATGTC+TGG - chr1_3:65097978-65097997 Msa0133770:intron 50.0%
AGACCCGTATCAGCATGTCT+GGG - chr1_3:65097979-65097998 Msa0133770:intron 50.0%
! CAGCATGTCTGGGTTTGTTC+GGG - chr1_3:65097989-65098008 Msa0133770:intron 50.0%
! CATCGGGTTTGTTCGTGTCT+AGG - chr1_3:65098315-65098334 Msa0133770:intron 50.0%
TGTCTAGGGACGACGAGTTT+GGG - chr1_3:65098330-65098349 Msa0133770:intron 50.0%
CTCAAGGTAGGAGCGAACAA+GGG + chr1_3:65098394-65098413 None:intergenic 50.0%
TCTCAAGGTAGGAGCGAACA+AGG + chr1_3:65098395-65098414 None:intergenic 50.0%
! GGCAACTTTTGCCGCATCTT+AGG + chr1_3:65098584-65098603 None:intergenic 50.0%
TTCATGCCATGCTTGGCAAC+AGG - chr1_3:65098685-65098704 Msa0133770:intron 50.0%
GCTATAGCAGCTCAACTACC+AGG - chr1_3:65098863-65098882 Msa0133770:intron 50.0%
ACTGGGCATTCCTATCAGGA+AGG + chr1_3:65098976-65098995 None:intergenic 50.0%
TTCTCCTTCTACACGCCACA+TGG - chr1_3:65099000-65099019 Msa0133770:intron 50.0%
AACCCTTGCACTTTCCCACT+GGG + chr1_3:65099026-65099045 None:intergenic 50.0%
!! GCTTTGGTGTCGACACTTTC+AGG + chr1_3:65099282-65099301 None:intergenic 50.0%
! GAAGAGTACGCCAACTCCCA+TGG + chr1_3:65097447-65097466 None:intergenic 55.0%
CATGCTCGCACCTACCTCAA+GGG + chr1_3:65097952-65097971 None:intergenic 55.0%
TCATGCTCGCACCTACCTCA+AGG + chr1_3:65097953-65097972 None:intergenic 55.0%
TAGACCCGGTCGTAGAGCAT+CGG - chr1_3:65098298-65098317 Msa0133770:intron 55.0%
AAACCCGATGCTCTACGACC+GGG + chr1_3:65098305-65098324 None:intergenic 55.0%
CAAACCCGATGCTCTACGAC+CGG + chr1_3:65098306-65098325 None:intergenic 55.0%
GTGTCTAGGGACGACGAGTT+TGG - chr1_3:65098329-65098348 Msa0133770:intron 55.0%
AATGAGCCACGCTTGATGCC+AGG + chr1_3:65098633-65098652 None:intergenic 55.0%
! GAGGTACCTGTTGCCAAGCA+TGG + chr1_3:65098694-65098713 None:intergenic 55.0%
AACGTGTCCGGCAGTCACTA+AGG - chr1_3:65098933-65098952 Msa0133770:intron 55.0%
ACGTGTCCGGCAGTCACTAA+GGG - chr1_3:65098934-65098953 Msa0133770:intron 55.0%
CAACCCTTGCACTTTCCCAC+TGG + chr1_3:65099027-65099046 None:intergenic 55.0%
CAAGGGTTGAAGCAGAGACG+AGG - chr1_3:65099038-65099057 Msa0133770:intron 55.0%
! GAAGAGTACGCCAACTCCCA+TGG + chr1_3:65097447-65097466 None:intergenic 55.0%
CATGCTCGCACCTACCTCAA+GGG + chr1_3:65097952-65097971 None:intergenic 55.0%
TCATGCTCGCACCTACCTCA+AGG + chr1_3:65097953-65097972 None:intergenic 55.0%
TAGACCCGGTCGTAGAGCAT+CGG - chr1_3:65098298-65098317 Msa0133770:intron 55.0%
AAACCCGATGCTCTACGACC+GGG + chr1_3:65098305-65098324 None:intergenic 55.0%
CAAACCCGATGCTCTACGAC+CGG + chr1_3:65098306-65098325 None:intergenic 55.0%
GTGTCTAGGGACGACGAGTT+TGG - chr1_3:65098329-65098348 Msa0133770:intron 55.0%
AATGAGCCACGCTTGATGCC+AGG + chr1_3:65098633-65098652 None:intergenic 55.0%
! GAGGTACCTGTTGCCAAGCA+TGG + chr1_3:65098694-65098713 None:intergenic 55.0%
AACGTGTCCGGCAGTCACTA+AGG - chr1_3:65098933-65098952 Msa0133770:intron 55.0%
ACGTGTCCGGCAGTCACTAA+GGG - chr1_3:65098934-65098953 Msa0133770:intron 55.0%
CAACCCTTGCACTTTCCCAC+TGG + chr1_3:65099027-65099046 None:intergenic 55.0%
CAAGGGTTGAAGCAGAGACG+AGG - chr1_3:65099038-65099057 Msa0133770:intron 55.0%
! AGACCCGGTCGTAGAGCATC+GGG - chr1_3:65098299-65098318 Msa0133770:intron 60.0%
!! GCGGCAAAAGTTGCCGGCTT+CGG - chr1_3:65098589-65098608 Msa0133770:intron 60.0%
!! GCAAAAGTTGCCGGCTTCGG+TGG - chr1_3:65098592-65098611 Msa0133770:intron 60.0%
AGCCACGCTTGATGCCAGGA+CGG + chr1_3:65098629-65098648 None:intergenic 60.0%
TGGGCCATGTGGCGTGTAGA+AGG + chr1_3:65099007-65099026 None:intergenic 60.0%
TACACGCCACATGGCCCAGT+GGG - chr1_3:65099009-65099028 Msa0133770:intron 60.0%
CACTTTCCCACTGGGCCATG+TGG + chr1_3:65099018-65099037 None:intergenic 60.0%
! TGGCCCAGTGGGAAAGTGCA+AGG - chr1_3:65099020-65099039 Msa0133770:intron 60.0%
! GGCCCAGTGGGAAAGTGCAA+GGG - chr1_3:65099021-65099040 Msa0133770:intron 60.0%
AGCAGAGACGAGGCTGTCGT+TGG - chr1_3:65099048-65099067 Msa0133770:intron 60.0%
! AGACCCGGTCGTAGAGCATC+GGG - chr1_3:65098299-65098318 Msa0133770:intron 60.0%
!! GCGGCAAAAGTTGCCGGCTT+CGG - chr1_3:65098589-65098608 Msa0133770:intron 60.0%
!! GCAAAAGTTGCCGGCTTCGG+TGG - chr1_3:65098592-65098611 Msa0133770:intron 60.0%
AGCCACGCTTGATGCCAGGA+CGG + chr1_3:65098629-65098648 None:intergenic 60.0%
TGGGCCATGTGGCGTGTAGA+AGG + chr1_3:65099007-65099026 None:intergenic 60.0%
TACACGCCACATGGCCCAGT+GGG - chr1_3:65099009-65099028 Msa0133770:intron 60.0%
CACTTTCCCACTGGGCCATG+TGG + chr1_3:65099018-65099037 None:intergenic 60.0%
! TGGCCCAGTGGGAAAGTGCA+AGG - chr1_3:65099020-65099039 Msa0133770:intron 60.0%
! GGCCCAGTGGGAAAGTGCAA+GGG - chr1_3:65099021-65099040 Msa0133770:intron 60.0%
AGCAGAGACGAGGCTGTCGT+TGG - chr1_3:65099048-65099067 Msa0133770:intron 60.0%
CTCCGTCCTGGCATCAAGCG+TGG - chr1_3:65098624-65098643 Msa0133770:intron 65.0%
CTACACGCCACATGGCCCAG+TGG - chr1_3:65099008-65099027 Msa0133770:intron 65.0%
CTCCGTCCTGGCATCAAGCG+TGG - chr1_3:65098624-65098643 Msa0133770:intron 65.0%
CTACACGCCACATGGCCCAG+TGG - chr1_3:65099008-65099027 Msa0133770:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 65097259 65099507 65097259 ID=Msa0133770;Name=Msa0133770
chr1_3 mRNA 65097259 65099507 65097259 ID=Msa0133770-mRNA-1;Parent=Msa0133770;Name=Msa0133770-mRNA-1;_AED=0.39;_eAED=0.39;_QI=87|1|1|1|1|1|3|0|305
chr1_3 exon 65097259 65097910 65097259 ID=Msa0133770-mRNA-1:exon:22121;Parent=Msa0133770-mRNA-1
chr1_3 exon 65098060 65098189 65098060 ID=Msa0133770-mRNA-1:exon:22120;Parent=Msa0133770-mRNA-1
chr1_3 exon 65099288 65099507 65099288 ID=Msa0133770-mRNA-1:exon:22119;Parent=Msa0133770-mRNA-1
chr1_3 five_prime_UTR 65099421 65099507 65099421 ID=Msa0133770-mRNA-1:five_prime_utr;Parent=Msa0133770-mRNA-1
chr1_3 CDS 65099288 65099420 65099288 ID=Msa0133770-mRNA-1:cds;Parent=Msa0133770-mRNA-1
chr1_3 CDS 65098060 65098189 65098060 ID=Msa0133770-mRNA-1:cds;Parent=Msa0133770-mRNA-1
chr1_3 CDS 65097259 65097910 65097259 ID=Msa0133770-mRNA-1:cds;Parent=Msa0133770-mRNA-1
Gene Sequence

>Msa0133770

ATGGGTAAAGCCCCTTGTTGTGAGAAACATGGGGTGAAAAGAGGAGCTTGGACTCCTGAAGAAGATGAAGCTTTAGTTGACTACATCAACAAACATGGCCATGGGAGTTGGCGTACTCTTCCTAAACATGCAGGTCTCCTAAGATGCGGCAAAAGTTGCCGGCTTCGGTGGATAAACTATCTCCGTCCTGGCATCAAGCGTGGCTCATTTACTAATGAAGAAGAAACTACTATTATTCAACTTCATGCCATGCTTGGCAACAGGTGGGCTGCTATAGCAGCTCAACTACCAGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATTTAAAGAAACGTGTCCGGCAGTCACTAAGGGAAAAACATCCATGTCTCCTTCCTGATAGGAATGCCCAGTCTAATTCTCCTTCTACACGCCACATGGCCCAGTGGGAAAGTGCAAGGGTTGAAGCAGAGACGAGGCTGTCGTTGGAGTCCACTTTGCTTAATTCAGGCTCTACGACTAAAACATATCCTGATTACTTTCTTCAACTTTGGCATTCTGATGTTGGAGAGAAATTTCGAGCAGGAGTAGTGTGTCAAAGCATTGTCTCACAAGCATCATCATCATCACTATCATCATCGAAATTGGAGTCATGTTCAGATGTCTCATTGCAGGTGAAAAACAACGAAACACAAAGCCTGAAAGTGTCGACACCAAAGCTTGAAGATGTTGACGTGATTCAGGAACAAAAAGCCAGTAACTACAAACTGAAGCTTGAAGATGATAGATCTGGTTCAGATTCAGGAAATTATGAGTTTCTTGATACTTCTGATTCTGCACTGAAGCACCTACTGCGTATGCCTGATGAAATAGGATTCCTGGGACATACTGACAATTTCTTGAATCTCCTTGATGGTAGATGTGAC
Protein sequence

>Msa0133770

MGKAPCCEKHGVKRGAWTPEEDEALVDYINKHGHGSWRTLPKHAGLLRCGKSCRLRWINYLRPGIKRGSFTNEEETTIIQLHAMLGNRWAAIAAQLPGRTDNEIKNYWNTHLKKRVRQSLREKHPCLLPDRNAQSNSPSTRHMAQWESARVEAETRLSLESTLLNSGSTTKTYPDYFLQLWHSDVGEKFRAGVVCQSIVSQASSSSLSSSKLESCSDVSLQVKNNETQSLKVSTPKLEDVDVIQEQKASNYKLKLEDDRSGSDSGNYEFLDTSDSALKHLLRMPDEIGFLGHTDNFLNLLDGRCD