AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0140180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140180 MtrunA17_Chr3g0134821 94.559 827 45 0 622 1448 12 838 0.0 1555
Msa0140180 MtrunA17_Chr3g0134821 59.450 545 137 10 122 622 297 801 1.49e-180 559
Msa0140180 MtrunA17_Chr3g0134821 44.758 248 114 7 1 228 1 245 1.55e-35 147
Msa0140180 MtrunA17_Chr7g0270101 61.279 829 272 8 624 1450 14 795 0.0 955
Msa0140180 MtrunA17_Chr7g0270101 55.276 597 128 9 123 622 202 756 0.0 592
Msa0140180 MtrunA17_Chr7g0270101 43.290 231 95 7 1 196 1 230 9.49e-31 131
Msa0140180 MtrunA17_Chr3g0134811 66.798 762 111 15 1 622 1 760 0.0 921
Msa0140180 MtrunA17_Chr3g0134811 57.283 714 186 8 845 1450 97 799 0.0 718
Msa0140180 MtrunA17_Chr3g0134811 73.558 208 47 3 624 831 14 213 1.73e-79 280
Msa0140180 MtrunA17_Chr5g0407211 66.819 437 111 3 1036 1450 3 427 0.0 610
Msa0140180 MtrunA17_Chr5g0407211 66.995 406 81 9 243 622 10 388 1.47e-174 528
Msa0140180 MtrunA17_Chr5g0407251 66.133 437 114 3 1036 1450 3 427 0.0 602
Msa0140180 MtrunA17_Chr5g0407251 66.502 406 83 9 243 622 10 388 9.73e-173 523
Msa0140180 MtrunA17_Chr3g0134851 47.882 543 183 9 924 1444 2 466 1.65e-127 404
Msa0140180 MtrunA17_Chr3g0134851 44.090 533 158 15 122 622 9 433 1.69e-92 308
Msa0140180 MtrunA17_Chr5g0430361 41.443 485 259 10 969 1444 591 1059 2.01e-103 356
Msa0140180 MtrunA17_Chr5g0430361 38.272 405 159 12 256 622 675 1026 9.49e-74 268
Msa0140180 MtrunA17_Chr3g0105291 42.308 416 223 8 1035 1442 602 1008 4.63e-96 335
Msa0140180 MtrunA17_Chr3g0105291 37.192 406 185 10 246 622 613 977 5.81e-70 257
Msa0140180 MtrunA17_Chr2g0316251 35.666 443 262 8 1014 1446 741 1170 6.82e-71 262
Msa0140180 MtrunA17_Chr2g0316251 33.249 394 190 10 258 622 786 1135 9.63e-52 200
Msa0140180 MtrunA17_Chr1g0205451 31.818 506 308 9 968 1442 513 1012 6.15e-66 247
Msa0140180 MtrunA17_Chr1g0205451 32.108 408 204 10 260 636 630 995 1.25e-48 191
Msa0140180 MtrunA17_Chr1g0185491 33.806 423 260 7 1033 1444 809 1222 9.60e-66 246
Msa0140180 MtrunA17_Chr1g0185491 30.886 395 200 10 259 622 837 1189 1.07e-44 178
Msa0140180 MtrunA17_Chr7g0259981 31.056 322 191 5 1129 1448 6 298 4.29e-44 163
Msa0140180 MtrunA17_Chr7g0259981 29.455 275 151 8 370 622 8 261 1.96e-30 123
Msa0140180 MtrunA17_Chr1g0182481 27.041 392 224 11 1069 1417 495 867 2.32e-38 156
Msa0140180 MtrunA17_Chr7g0265211 26.941 438 230 13 1070 1440 531 945 5.46e-37 152
Msa0140180 MtrunA17_Chr7g0265211 25.962 416 213 20 270 622 531 914 1.32e-17 89.4
Msa0140180 MtrunA17_Chr1g0179841 26.097 433 234 14 1070 1437 386 797 4.23e-32 135
Msa0140180 MtrunA17_Chr4g0028111 24.646 353 197 9 1134 1424 225 570 5.21e-23 105
Msa0140180 MtrunA17_Chr4g0055731 20.853 422 246 11 1035 1436 110 463 1.47e-21 100
Msa0140180 MtrunA17_Chr4g0055731 24.719 267 144 9 375 622 209 437 9.19e-17 85.1
Msa0140180 MtrunA17_Chr2g0320451 29.586 169 111 4 1281 1448 866 1027 2.93e-17 88.2
Msa0140180 MtrunA17_Chr2g0320451 30.000 140 93 2 488 622 852 991 7.63e-13 73.9
Msa0140180 MtrunA17_Chr2g0320451 28.163 245 155 5 942 1179 370 600 1.08e-11 70.1
Msa0140180 MtrunA17_Chr4g0025251 26.357 258 167 8 1205 1445 453 704 3.88e-16 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0140180 AT5G58610.4 40.723 415 239 5 1035 1444 367 779 2.03e-93 323
Msa0140180 AT5G58610.4 35.955 445 210 12 213 622 342 746 4.99e-66 242
Msa0140180 AT5G58610.8 40.723 415 239 5 1035 1444 598 1010 2.98e-91 320
Msa0140180 AT5G58610.8 35.506 445 212 11 213 622 573 977 8.27e-65 240
Msa0140180 AT5G58610.2 40.723 415 239 5 1035 1444 598 1010 2.98e-91 320
Msa0140180 AT5G58610.2 35.506 445 212 11 213 622 573 977 8.27e-65 240
Msa0140180 AT5G58610.3 40.723 415 239 5 1035 1444 598 1010 4.48e-91 321
Msa0140180 AT5G58610.3 35.506 445 212 11 213 622 573 977 9.35e-65 241
Msa0140180 AT5G58610.5 40.723 415 239 5 1035 1444 589 1001 8.71e-91 320
Msa0140180 AT5G58610.5 35.955 445 210 12 213 622 564 968 1.09e-64 241
Msa0140180 AT5G58610.7 40.723 415 239 5 1035 1444 589 1001 9.80e-91 320
Msa0140180 AT5G58610.7 35.506 445 212 11 213 622 564 968 1.44e-64 240
Msa0140180 AT5G58610.6 38.499 413 225 5 1035 1444 589 975 2.58e-81 291
Msa0140180 AT5G58610.6 34.884 430 209 9 213 622 564 942 5.04e-61 229
Msa0140180 AT5G58610.1 38.499 413 225 5 1035 1444 589 975 2.95e-81 291
Msa0140180 AT5G58610.1 34.884 430 209 9 213 622 564 942 5.70e-61 229
Msa0140180 AT5G58610.10 40.730 356 204 5 1035 1385 598 951 7.69e-76 273
Msa0140180 AT5G58610.10 34.906 424 201 11 213 601 573 956 4.05e-59 222
Msa0140180 AT5G58610.9 40.730 356 204 5 1035 1385 589 942 1.86e-75 272
Msa0140180 AT5G58610.9 33.192 473 237 12 164 601 519 947 3.84e-57 216
Msa0140180 AT5G36740.5 32.339 436 279 7 1016 1446 529 953 1.94e-65 244
Msa0140180 AT5G36740.5 31.525 387 204 11 259 622 570 918 8.53e-48 187
Msa0140180 AT5G36740.1 32.339 436 279 7 1016 1446 529 953 1.94e-65 244
Msa0140180 AT5G36740.1 31.525 387 204 11 259 622 570 918 8.53e-48 187
Msa0140180 AT1G05380.3 32.767 412 268 4 1035 1442 519 925 2.09e-65 243
Msa0140180 AT1G05380.3 29.630 405 215 8 260 636 546 908 2.57e-44 176
Msa0140180 AT1G05380.1 32.767 412 268 4 1035 1442 519 925 2.09e-65 243
Msa0140180 AT1G05380.1 29.630 405 215 8 260 636 546 908 2.57e-44 176
Msa0140180 AT1G05380.2 32.767 412 268 4 1035 1442 519 925 2.09e-65 243
Msa0140180 AT1G05380.2 29.630 405 215 8 260 636 546 908 2.57e-44 176
Msa0140180 AT5G58610.11 39.319 323 189 5 1035 1352 589 909 8.06e-64 236
Msa0140180 AT5G58610.11 31.494 435 219 12 164 563 519 909 1.28e-43 173
Msa0140180 AT5G36740.4 31.614 446 279 8 1016 1446 376 810 1.10e-62 234
Msa0140180 AT5G36740.4 30.730 397 204 12 259 622 417 775 1.11e-44 177
Msa0140180 AT3G14980.5 31.690 426 263 7 1035 1448 575 984 1.64e-62 234
Msa0140180 AT3G14980.5 30.435 391 203 7 258 622 600 947 3.66e-46 182
Msa0140180 AT3G14980.6 31.690 426 263 7 1035 1448 620 1029 1.99e-62 234
Msa0140180 AT3G14980.6 30.435 391 203 7 258 622 645 992 4.08e-46 182
Msa0140180 AT3G14980.1 31.690 426 263 7 1035 1448 620 1029 1.99e-62 234
Msa0140180 AT3G14980.1 30.435 391 203 7 258 622 645 992 4.08e-46 182
Msa0140180 AT3G14980.2 31.690 426 263 7 1035 1448 620 1029 1.99e-62 234
Msa0140180 AT3G14980.2 30.435 391 203 7 258 622 645 992 4.08e-46 182
Msa0140180 AT3G14980.3 31.690 426 263 7 1035 1448 620 1029 3.42e-62 233
Msa0140180 AT3G14980.3 30.435 391 203 7 258 622 645 992 4.01e-46 182
Msa0140180 AT5G36670.4 30.973 452 278 9 1016 1446 529 967 4.59e-59 224
Msa0140180 AT5G36670.4 30.287 383 204 12 259 618 570 912 2.79e-42 170
Msa0140180 AT5G36670.5 30.973 452 278 9 1016 1446 529 967 4.59e-59 224
Msa0140180 AT5G36670.5 30.287 383 204 12 259 618 570 912 2.79e-42 170
Msa0140180 AT4G14920.2 30.310 419 281 5 1032 1446 576 987 6.42e-57 217
Msa0140180 AT4G14920.2 28.642 405 217 9 264 640 610 970 1.66e-41 167
Msa0140180 AT4G14920.1 30.310 419 281 5 1032 1446 576 987 6.42e-57 217
Msa0140180 AT4G14920.1 28.642 405 217 9 264 640 610 970 1.66e-41 167
Msa0140180 AT4G14920.3 30.310 419 281 5 1032 1446 576 987 6.79e-57 216
Msa0140180 AT4G14920.3 28.642 405 217 9 264 640 610 970 1.67e-41 167
Msa0140180 AT5G36670.3 30.303 462 278 10 1016 1446 376 824 4.09e-56 213
Msa0140180 AT5G36670.3 29.517 393 204 13 259 618 417 769 4.50e-39 159
Msa0140180 AT5G36670.2 32.620 374 236 7 1016 1384 529 891 6.35e-56 211
Msa0140180 AT5G36670.2 30.833 360 188 11 259 595 570 891 1.39e-41 167
Msa0140180 AT5G36740.2 32.620 374 236 7 1016 1384 529 891 6.35e-56 211
Msa0140180 AT5G36740.2 30.833 360 188 11 259 595 570 891 1.39e-41 167
Msa0140180 AT5G36740.3 32.620 374 236 7 1016 1384 529 891 6.35e-56 211
Msa0140180 AT5G36740.3 30.833 360 188 11 259 595 570 891 1.39e-41 167
Msa0140180 AT5G36670.1 30.303 462 278 10 1016 1446 529 977 1.05e-55 213
Msa0140180 AT5G36670.1 29.517 393 204 13 259 618 570 922 5.48e-39 159
Msa0140180 AT5G63900.1 33.236 343 194 10 1114 1446 227 544 6.80e-51 190
Msa0140180 AT5G63900.1 35.636 275 141 11 369 622 250 509 1.41e-38 153
Msa0140180 AT3G14980.4 31.722 331 198 7 1035 1353 620 934 6.41e-45 177
Msa0140180 AT3G14980.4 27.928 333 171 7 258 564 645 934 6.53e-29 126
Msa0140180 AT2G37520.1 27.126 435 230 13 1070 1444 410 817 4.11e-40 161
Msa0140180 AT2G37520.1 24.651 430 191 13 270 622 410 783 2.28e-27 121
Msa0140180 AT3G53680.1 29.146 398 213 13 1070 1417 427 805 1.41e-37 154
Msa0140180 AT3G53680.1 26.353 425 189 14 270 622 427 799 7.13e-28 122
Msa0140180 AT3G53680.2 29.146 398 213 13 1070 1417 429 807 1.53e-37 153
Msa0140180 AT3G53680.2 26.353 425 189 14 270 622 429 801 7.81e-28 122
Msa0140180 AT2G36720.1 24.769 432 251 9 1070 1442 557 973 6.92e-36 149
Msa0140180 AT2G36720.1 24.046 603 291 21 124 637 432 956 1.10e-25 115
Msa0140180 AT2G36720.2 24.769 432 251 9 1070 1442 557 973 6.92e-36 149
Msa0140180 AT2G36720.2 24.046 603 291 21 124 637 432 956 1.10e-25 115
Msa0140180 AT2G27980.1 26.434 488 261 13 1031 1445 598 1060 2.97e-35 147

Find 266 sgRNAs with CRISPR-Local

Find 495 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCACTCTCGCTGGATTTA+AGG 0.128168 1_3:+74354174 Msa0140180:CDS
AAAACAACATCTTCTTTCTT+TGG 0.186886 1_3:+74348042 Msa0140180:CDS
AAAACAACATCTTCTTTCTT+TGG 0.186886 1_3:+74352905 Msa0140180:CDS
TATTACTTTCTTAGAATTTC+AGG 0.193107 1_3:+74355215 Msa0140180:CDS
TGTGCGGAAAAGTTTCATTT+TGG 0.198708 1_3:+74349581 Msa0140180:CDS
CACCATTCTCTTACAGCTTC+TGG 0.208379 1_3:-74352819 None:intergenic
GTTGCAACTATAAGAATTTA+TGG 0.208645 1_3:+74349980 Msa0140180:CDS
ATAAGATTCAATTTAGTATT+AGG 0.210355 1_3:+74355285 Msa0140180:CDS
AATCTTATCAAAGGCCATTT+AGG 0.221992 1_3:-74355270 None:intergenic
GTTTGTTCTATTTGTGGTTT+TGG 0.227006 1_3:+74354352 Msa0140180:CDS
TACCATTCTCTTACAGCTTC+TGG 0.232489 1_3:-74347956 None:intergenic
TTGATGTCGCTGCTGCTTCC+TGG 0.237739 1_3:-74348401 None:intergenic
AGATTAGCTGCAACCGTTAT+TGG 0.238814 1_3:-74349725 None:intergenic
TACACATTCTTGCTTGCATT+TGG 0.242887 1_3:-74349522 None:intergenic
CCAACTATTGATGCTTTATC+TGG 0.251503 1_3:+74349848 Msa0140180:CDS
CATAAACGCTTGAACTTTCA+TGG 0.256618 1_3:+74349914 Msa0140180:CDS
TTGTCCTCGATGTTCTTTAT+TGG 0.261579 1_3:-74355034 None:intergenic
TGGTTTCTATAATGTGATTT+TGG 0.261940 1_3:+74354933 Msa0140180:CDS
CCAACAATTGATGCTTTAAC+TGG 0.273315 1_3:+74354847 Msa0140180:CDS
AAGTGCTGGTAGAAAGAATT+TGG 0.277416 1_3:+74348009 Msa0140180:CDS
GTGGCTACCATAAGGATTTA+TGG 0.283165 1_3:+74354979 Msa0140180:CDS
GTTTGTTCTATTTGTGATTT+GGG 0.285604 1_3:+74349377 Msa0140180:CDS
TTTCTTTGGGTTGGAAGCTT+TGG 0.293261 1_3:+74352919 Msa0140180:CDS
ATCATCCACTAGTATCTTCT+TGG 0.299268 1_3:+74354222 Msa0140180:CDS
AAACAACATCTTCTTTCTTT+GGG 0.299298 1_3:+74348043 Msa0140180:CDS
AAACAACATCTTCTTTCTTT+GGG 0.299298 1_3:+74352906 Msa0140180:CDS
ATTATTGTTGCTGCTGTTAC+TGG 0.303084 1_3:-74353080 None:intergenic
TTATGTCTAAAGAAGTTGTT+AGG 0.303385 1_3:+74349698 Msa0140180:intron
TATTAAATAGAGAAGGTATA+AGG 0.305895 1_3:+74354008 Msa0140180:CDS
AGAGAATGGTACCGCTTAAC+AGG 0.307427 1_3:+74347968 Msa0140180:CDS
AACAGTATCGTTATTTGCTT+TGG 0.308260 1_3:-74349357 None:intergenic
TGCTGCAGTTGAAGGGCGTT+CGG 0.308639 1_3:-74348193 None:intergenic
TGTTTGTTCTATTTGTGATT+TGG 0.310842 1_3:+74349376 Msa0140180:CDS
AGATTATCCGCAACCTTAAC+TGG 0.315691 1_3:-74354700 None:intergenic
GTTGATAAAGAATAAAGTTT+TGG 0.317891 1_3:+74354054 Msa0140180:CDS
AAAGGTATTCACTTGTTTCT+TGG 0.322354 1_3:+74354032 Msa0140180:CDS
GTTGATAAAGAATCAAGTTT+TGG 0.324712 1_3:+74348929 Msa0140180:intron
GTACATTCTTGTTTACGTTT+AGG 0.328883 1_3:-74354496 None:intergenic
AACCACTGAAGAAACCTAAA+TGG 0.332081 1_3:+74355256 Msa0140180:CDS
GCTGCAGTTGAAGGGCGTTC+GGG 0.336474 1_3:-74348192 None:intergenic
AGAGAATGGTGCCGCTTAAC+AGG 0.346625 1_3:+74352831 Msa0140180:CDS
ACACATTCTTGCTTGCATTT+GGG 0.347129 1_3:-74349521 None:intergenic
GAAAATGGAGGAAGTGATTT+CGG 0.358446 1_3:+74354957 Msa0140180:CDS
TTTAGGTCTCGATCGAGTTC+CGG 0.360500 1_3:+74349451 Msa0140180:intron
GACACATGGACAAAATCTTT+TGG 0.362557 1_3:+74355150 Msa0140180:CDS
GATACTGTTTGTTCTATTTG+TGG 0.366590 1_3:+74354346 Msa0140180:CDS
AACAAGAATATTGTTATCAT+TGG 0.367054 1_3:-74354524 None:intergenic
GCAATATAGTTTGCGCGAAC+AGG 0.368324 1_3:+74354647 Msa0140180:CDS
GGTTTCTCTTTCAACTGTAA+TGG 0.368815 1_3:-74353581 None:intergenic
GAGAAACAATTGACTCGCTT+TGG 0.374118 1_3:+74355087 Msa0140180:CDS
GAAAATGGGTAAAGTCATTT+CGG 0.376245 1_3:+74349958 Msa0140180:CDS
GTGAGCAGAAATTTCACTTT+GGG 0.378660 1_3:+74354557 Msa0140180:CDS
TCCCCGCGTCAGAATTTACT+TGG 0.381326 1_3:-74349232 None:intergenic
TTTAGATCTTGATCGAGTTC+CGG 0.381635 1_3:+74354426 Msa0140180:CDS
GTTACTGGTGCTGCAGTTGA+AGG 0.385036 1_3:-74353065 None:intergenic
ATCGAGTTCCGGATGGTGAT+TGG 0.385313 1_3:+74354437 Msa0140180:CDS
TAGGTTTCTTCAGTGGTTTA+AGG 0.387281 1_3:-74355251 None:intergenic
CCAGATAAAGCATCAATAGT+TGG 0.388520 1_3:-74349848 None:intergenic
CCAGTTAAAGCATCAATTGT+TGG 0.391070 1_3:-74354847 None:intergenic
AGTTGCTGCTGCTTCCTCCT+TGG 0.398593 1_3:-74348466 None:intergenic
CCTTCGGTTGCACTTTCAGC+TGG 0.398742 1_3:-74353454 None:intergenic
TGCTATTGCTGCTGCTTCCT+CGG 0.398745 1_3:-74353810 None:intergenic
CGTGTTAATTTCAATATCAC+TGG 0.399307 1_3:+74349041 Msa0140180:CDS
AACATCTTCTTTCTTTGGGT+TGG 0.401046 1_3:+74352910 Msa0140180:CDS
CGACAACAACATCAATATAT+TGG 0.408399 1_3:+74353288 Msa0140180:CDS
TCCTCGATGTTCTTTATTGG+TGG 0.411517 1_3:-74355031 None:intergenic
ATCGAGTTCCGGATGGAGAT+TGG 0.415728 1_3:+74349462 Msa0140180:CDS
CCCTACTTCAGAATTTCCTT+CGG 0.418606 1_3:-74349321 None:intergenic
TTTCAATATCACTGGATTTG+AGG 0.420799 1_3:+74349049 Msa0140180:CDS
GGTTTCTCTTTCGACGGCAA+TGG 0.423351 1_3:-74348435 None:intergenic
ATTAAATAGAGAAGGTATAA+GGG 0.424847 1_3:+74354009 Msa0140180:CDS
TGTTGTTCTTTCTGTTTCCT+CGG 0.431751 1_3:-74348268 None:intergenic
TTTGGGTGTGTAAAGGCGTT+AGG 0.435106 1_3:+74349599 Msa0140180:CDS
AGTCGCTCAATCGACTGAAA+TGG 0.435511 1_3:-74353515 None:intergenic
CAGCAGCGACATCAATCTAT+TGG 0.437179 1_3:+74348409 Msa0140180:CDS
AGTAACAATGTTGTCAAAAG+AGG 0.439917 1_3:+74348981 Msa0140180:CDS
TATAAGAATTTATGGTCAAA+AGG 0.441015 1_3:+74349988 Msa0140180:CDS
GCTTCTTCCTCGGATTCTCT+TGG 0.442664 1_3:-74353266 None:intergenic
CTTTGAATTGACTTCTAATG+AGG 0.442824 1_3:+74353847 Msa0140180:CDS
ACCATCCACTAGTATCTTGT+TGG 0.443708 1_3:+74349097 Msa0140180:CDS
CAGATAAAGCATCAATAGTT+GGG 0.446006 1_3:-74349847 None:intergenic
TTGCACTTCAAAATTTCCTT+CGG 0.447322 1_3:-74349267 None:intergenic
TAAACCGGAAGTTACTAATT+CGG 0.448302 1_3:+74353961 Msa0140180:CDS
TTTGGGTGTGTAAAGGCAAC+AGG 0.448561 1_3:+74354574 Msa0140180:CDS
ATTTGCTTCATAGTTTGCTT+CGG 0.449437 1_3:-74354320 None:intergenic
GCAGTGGTGAAAAGAAGAAT+TGG 0.449591 1_3:+74349645 Msa0140180:CDS
GCTTCCTCCTTGGATTCTCT+CGG 0.449759 1_3:-74348456 None:intergenic
TCAGAGGCTTCTGGTAAGAA+AGG 0.450319 1_3:+74348855 Msa0140180:CDS
TCAGAGGATTGTGGTAGAAG+AGG 0.451281 1_3:+74348798 Msa0140180:CDS
TGTTGTTGTCGCTTCTTCCT+CGG 0.452875 1_3:-74353276 None:intergenic
ACTGATACCTCGGATTCCTT+CGG 0.453162 1_3:-74353470 None:intergenic
CGGTTGCAGCTAATCTAACT+TGG 0.454424 1_3:+74349732 Msa0140180:CDS
ATTGAGCGACTGAGAGCATC+TGG 0.454882 1_3:+74353527 Msa0140180:CDS
TGTGTAAAGGCGTTAGGACT+TGG 0.455855 1_3:+74349605 Msa0140180:CDS
TGCAAGCAAGAATGTGTAGA+TGG 0.456542 1_3:+74349527 Msa0140180:CDS
GACACATGGACAAAAGCGTT+TGG 0.456899 1_3:+74350151 Msa0140180:CDS
CAGAGGATTGTGGTAGAAGA+GGG 0.460042 1_3:+74348799 Msa0140180:CDS
ACAGCTTCTGGACAATGCTC+AGG 0.460946 1_3:-74347944 None:intergenic
AGGAATGCGTCGTTTGTTGA+TGG 0.462361 1_3:+74355056 Msa0140180:CDS
GCTATTGTGGAAACCAGTTA+AGG 0.464746 1_3:+74354687 Msa0140180:CDS
TGATGTCGCTGCTGCTTCCT+GGG 0.467486 1_3:-74348400 None:intergenic
ACTAGTATCTTCTTGGAAGA+TGG 0.470828 1_3:+74354229 Msa0140180:CDS
GCATGTGATTCAATCTAAAC+CGG 0.473942 1_3:+74353946 Msa0140180:CDS
GGTTGCACTTTCAGCTGGAA+TGG 0.474012 1_3:-74353449 None:intergenic
TACTACATTATCAACATCAA+TGG 0.474099 1_3:+74353913 Msa0140180:CDS
GTTATACTTCTCCTAACAAT+GGG 0.474735 1_3:+74348110 Msa0140180:CDS
GTTATACTTCTCCTAACAAT+GGG 0.474735 1_3:+74352973 Msa0140180:CDS
TGATTTCGGTGGCTACCATA+AGG 0.474912 1_3:+74354971 Msa0140180:CDS
CTTGTGACCATAAATCCTTA+TGG 0.478256 1_3:-74354986 None:intergenic
GAGAAACAGTTGACACGCTT+AGG 0.478300 1_3:+74350088 Msa0140180:CDS
TTCTTCAATGCAACTCTCGC+AGG 0.478869 1_3:-74348158 None:intergenic
GTGCAAGTAAATTCTGAAGC+AGG 0.478869 1_3:+74349284 Msa0140180:CDS
TTCTTCAATGCAACTCTCGC+AGG 0.478869 1_3:-74353021 None:intergenic
GGAAGATGGAAGGTCGTTGT+TGG 0.479840 1_3:+74354243 Msa0140180:CDS
CCCACCGAATTAGTAACTTC+CGG 0.484863 1_3:-74353965 None:intergenic
TCGCTCTTTAGAAAGTAAAC+AGG 0.485992 1_3:-74353243 None:intergenic
GCTGCTTCCTCGGATTCACT+TGG 0.486702 1_3:-74353800 None:intergenic
CTGCAGTTGAAGGGTGTTTG+AGG 0.486894 1_3:-74353055 None:intergenic
TGCTCTAGCTACTGCTTCCT+CGG 0.490289 1_3:-74353144 None:intergenic
TCCTCTTGCTACTGATACCT+CGG 0.491108 1_3:-74353480 None:intergenic
ATTTCACTTTGGGTGTGTAA+AGG 0.492058 1_3:+74354567 Msa0140180:CDS
TAAAGATAGTGCTGGTAGAA+AGG 0.492174 1_3:+74352866 Msa0140180:CDS
TGTTGTTGCTGCTGCTTCCA+CGG 0.492759 1_3:-74353345 None:intergenic
GACGTTGTTGCTGCAGTTGA+AGG 0.492904 1_3:-74348201 None:intergenic
AGAGCTACCGAGGGAATCCC+AGG 0.493555 1_3:+74348383 Msa0140180:CDS
AGTTGCTCATTCGACTGTAA+TGG 0.494258 1_3:-74353314 None:intergenic
ACTAGTATCTTGTTGGGAGA+TGG 0.496603 1_3:+74349104 Msa0140180:CDS
GCTGAAGCAAATTCTGAAGC+AGG 0.497345 1_3:+74349194 Msa0140180:intron
GGTCGTTGTTGGACTGTCAA+AGG 0.500201 1_3:+74349129 Msa0140180:CDS
TTGTCTTCGATATTGTTCCT+TGG 0.503462 1_3:-74350035 None:intergenic
AGTCGCTCTTTCGACTGTAA+TGG 0.504195 1_3:-74353383 None:intergenic
AGTCGCTCTTTCGACTGTAA+TGG 0.504195 1_3:-74353647 None:intergenic
CAATTTCTTCGTCTCCACTA+CGG 0.504197 1_3:+74348223 Msa0140180:CDS
GCTGTTTCCTCAGATTCTCT+CGG 0.506010 1_3:-74348324 None:intergenic
CCATCCACTAGTATCTTGTT+GGG 0.506128 1_3:+74349098 Msa0140180:CDS
GGTAGCTCTTTCGATTGTAA+AGG 0.512790 1_3:-74348369 None:intergenic
CCATGTGTCTATAGCATCCT+CGG 0.512950 1_3:-74355136 None:intergenic
TGTGAGCAGAAATTTCACTT+TGG 0.513785 1_3:+74354556 Msa0140180:CDS
ACTGGATTTGAGGCTCATGC+TGG 0.514944 1_3:+74349059 Msa0140180:CDS
CGTTATACTTCTCCTAACAA+TGG 0.516763 1_3:+74348109 Msa0140180:CDS
CGTTATACTTCTCCTAACAA+TGG 0.516763 1_3:+74352972 Msa0140180:CDS
CAGAGGCTTCTGGTAAGAAA+GGG 0.518719 1_3:+74348856 Msa0140180:CDS
GGGAGATGGAAGGTCGTTGT+TGG 0.519941 1_3:+74349118 Msa0140180:CDS
TGCAGTTGAAGGGTGTTTGA+GGG 0.525454 1_3:-74353054 None:intergenic
CCATGTGTCTATAGCATCCT+CGG 0.526184 1_3:-74350137 None:intergenic
ACTGCTTCCTCAGATTCTCT+CGG 0.534592 1_3:-74353602 None:intergenic
AGAGAAACCGAGAGAATCCA+AGG 0.534686 1_3:+74348449 Msa0140180:CDS
ACTGCTTCCTCGGATTCTCT+AGG 0.535233 1_3:-74353134 None:intergenic
GCCGAAGGAAATTCTGAAGT+AGG 0.536925 1_3:+74349320 Msa0140180:CDS
TGCGAGAGTTGCATTGAAGA+AGG 0.537811 1_3:+74348160 Msa0140180:CDS
TGCGAGAGTTGCATTGAAGA+AGG 0.537811 1_3:+74353023 Msa0140180:CDS
GTTACTAATTCGGTGGGTAG+TGG 0.540215 1_3:+74353971 Msa0140180:CDS
CTCATTAGAAGTCAATTCAA+AGG 0.543407 1_3:-74353846 None:intergenic
TTACTGGTGCTGCAGTTGAA+GGG 0.544490 1_3:-74353064 None:intergenic
GTCCAGAAGCTGTAAGAGAA+TGG 0.545236 1_3:+74347954 Msa0140180:CDS
AAGATACTAGTGGATGATGT+AGG 0.545362 1_3:-74354217 None:intergenic
GTCGTTGTTGGACTGTCAAA+GGG 0.545406 1_3:+74349130 Msa0140180:CDS
GTGGAAACCAGTTAAGGTTG+CGG 0.547741 1_3:+74354693 Msa0140180:CDS
ACAGCTTCTGGACAATGCTC+AGG 0.548245 1_3:-74352807 None:intergenic
TTTAACAGAAATGAAACTAG+AGG 0.548944 1_3:-74353879 None:intergenic
ATAGAGAAGGTATAAGGGAA+AGG 0.549390 1_3:+74354014 Msa0140180:CDS
CGGTGGGTAGTGGTAAAAGA+GGG 0.549718 1_3:+74353981 Msa0140180:CDS
GAGAAGAATTCAGAGGATTG+TGG 0.552564 1_3:+74348789 Msa0140180:CDS
ACGCTTAGGAGTTGAAAGCT+TGG 0.553379 1_3:+74350102 Msa0140180:CDS
GTCCAGAAGCTGTAAGAGAA+TGG 0.553572 1_3:+74352817 Msa0140180:CDS
ACTAAATTGAATCTTATCAA+AGG 0.553822 1_3:-74355279 None:intergenic
TCGGTGGGTAGTGGTAAAAG+AGG 0.553960 1_3:+74353980 Msa0140180:CDS
TCTCTCGGTTTCTCTTTCGA+CGG 0.559043 1_3:-74348441 None:intergenic
GTCGTTGTTGGAATGTCAAA+GGG 0.560420 1_3:+74354255 Msa0140180:CDS
GTAACAATGTTGTCAAAAGA+GGG 0.560691 1_3:+74348982 Msa0140180:CDS
GCTGCTTCCTGGGATTCCCT+CGG 0.560736 1_3:-74348390 None:intergenic
GGTCGTTGTTGGAATGTCAA+AGG 0.562897 1_3:+74354254 Msa0140180:CDS
TATGTCTAAAGAAGTTGTTA+GGG 0.563880 1_3:+74349699 Msa0140180:intron
GTTGTTAGGGAAACCAATAA+CGG 0.563987 1_3:+74349712 Msa0140180:CDS
GGGATGGTATTAAATAGAGA+AGG 0.564639 1_3:+74354001 Msa0140180:CDS
GGCCATTTAGGTTTCTTCAG+TGG 0.564961 1_3:-74355258 None:intergenic
CCGAAGGAAATTCTGAAGTA+GGG 0.567971 1_3:+74349321 Msa0140180:CDS
CTGCAGTTGAAGGGCGTTCG+GGG 0.568498 1_3:-74348191 None:intergenic
CAAGATCGTAAAGAAAGTGC+TGG 0.568933 1_3:+74347995 Msa0140180:CDS
AACAATGTTGTCAAAAGAGG+GGG 0.570596 1_3:+74348984 Msa0140180:CDS
GTCACAATGTTGTTACAAGC+GGG 0.572482 1_3:+74354107 Msa0140180:CDS
ACCGGAAGTTACTAATTCGG+TGG 0.573180 1_3:+74353964 Msa0140180:CDS
GGTAGCCACGAAAACTATCT+CGG 0.575564 1_3:-74350014 None:intergenic
AGGTTGCGGATAATCTAACT+TGG 0.576168 1_3:+74354707 Msa0140180:CDS
GGACAGAACCAATCACCATC+CGG 0.576643 1_3:-74354445 None:intergenic
AGAGAAACCGAGAGAATCTG+AGG 0.577170 1_3:+74353595 Msa0140180:CDS
GGACAGAACCAATCTCCATC+CGG 0.578561 1_3:-74349470 None:intergenic
CCCCGCGTCAGAATTTACTT+GGG 0.579731 1_3:-74349231 None:intergenic
TGCAAGTAAATTCTGAAGCA+GGG 0.580351 1_3:+74349285 Msa0140180:CDS
GCCCAAGTAAATTCTGACGC+GGG 0.582837 1_3:+74349230 Msa0140180:CDS
GGGACTAATGTGCTCTGTCG+TGG 0.584268 1_3:+74354082 Msa0140180:CDS
TATGTCTAAAGAAGCTATTG+TGG 0.590646 1_3:+74354674 Msa0140180:CDS
CATAAGGATTTATGGTCACA+AGG 0.591190 1_3:+74354987 Msa0140180:CDS
AGGTAGTGATAAAAGAGGAA+AGG 0.591418 1_3:+74348746 Msa0140180:intron
ACGTTGTTGCTGCAGTTGAA+GGG 0.592488 1_3:-74348200 None:intergenic
TCAAAGACGGAAGGTGAAAG+AGG 0.593891 1_3:+74348885 Msa0140180:CDS
AAAGAGACCGAGAGAATCTG+AGG 0.594374 1_3:+74348317 Msa0140180:CDS
GATCTTGTAGTCCTGTTAAG+CGG 0.594532 1_3:-74352842 None:intergenic
CAAGATCGTAAAGATAGTGC+TGG 0.595589 1_3:+74352858 Msa0140180:CDS
TTTAATGGAGAAGAATTCAG+AGG 0.596793 1_3:+74348782 Msa0140180:CDS
AATAAAGAACATCGAGGACA+AGG 0.599710 1_3:+74355036 Msa0140180:CDS
TGTTCTATTTGTGATTTGGG+AGG 0.600755 1_3:+74349380 Msa0140180:CDS
CTGAAGCAAATTCTGAAGCA+GGG 0.601311 1_3:+74349195 Msa0140180:intron
AGAGCGACTGAGAGAATCTG+AGG 0.606930 1_3:+74353397 Msa0140180:CDS
GTATCTTCTTGGAAGATGGA+AGG 0.608492 1_3:+74354233 Msa0140180:CDS
ATCTCCCAACAAGATACTAG+TGG 0.609147 1_3:-74349102 None:intergenic
GAAAGGGAAGGTATCAAAGA+CGG 0.611839 1_3:+74348872 Msa0140180:CDS
TCAAGTCACATTGCCAGCAG+TGG 0.612235 1_3:+74349629 Msa0140180:CDS
AAAGAGATTGAGAGAATCCG+AGG 0.612293 1_3:+74348251 Msa0140180:CDS
TCGCTTTGGAGTAGAAAGCA+TGG 0.612726 1_3:+74355101 Msa0140180:CDS
GATCTTGTAGCCCTGTTAAG+CGG 0.613318 1_3:-74347979 None:intergenic
AGACGGAAGGTGAAAGAGGA+AGG 0.613430 1_3:+74348889 Msa0140180:CDS
CAACTGAGGTGGAATACAGA+AGG 0.615320 1_3:-74354403 None:intergenic
CAAGATCTAAACAACTGAGG+TGG 0.615408 1_3:-74354414 None:intergenic
CCCAACAAGATACTAGTGGA+TGG 0.615712 1_3:-74349098 None:intergenic
TACAATCGAAAGAGCTACCG+AGG 0.616630 1_3:+74348373 Msa0140180:CDS
AAAGAAGCGTAAGTTAAATG+TGG 0.618501 1_3:+74354795 Msa0140180:CDS
GATCTTGATCGAGTTCCGGA+TGG 0.620225 1_3:+74354430 Msa0140180:CDS
AGAGCGACCAAGAGAATCCG+AGG 0.620291 1_3:+74353259 Msa0140180:CDS
AATGTGAATAGTGATGATGA+TGG 0.621059 1_3:+74354742 Msa0140180:CDS
ATCTTCCAAGAAGATACTAG+TGG 0.622444 1_3:-74354227 None:intergenic
GGTCTCGATCGAGTTCCGGA+TGG 0.624514 1_3:+74349455 Msa0140180:intron
GGGACTAATGTATTCTGTCG+TGG 0.624640 1_3:+74348957 Msa0140180:CDS
CCGGAAGTTACTAATTCGGT+GGG 0.625187 1_3:+74353965 Msa0140180:CDS
AAAGAAGAGAAAGTTGAATG+TGG 0.626130 1_3:+74349796 Msa0140180:CDS
TCGGTAGGTAGTGATAAAAG+AGG 0.626684 1_3:+74348741 Msa0140180:intron
AGAGCGACTGAGAGAATGCG+AGG 0.629289 1_3:+74353661 Msa0140180:CDS
CAACTGAGGTGGAATGCAGA+AGG 0.629465 1_3:-74349428 None:intergenic
AGTCACAATGTTGTTACAAG+CGG 0.630781 1_3:+74354106 Msa0140180:CDS
CCAGCTGAAAGTGCAACCGA+AGG 0.631294 1_3:+74353454 Msa0140180:CDS
TCTTGTTTGTGTTCAATGTG+CGG 0.633915 1_3:+74349565 Msa0140180:CDS
GGGAATCATTCTGTTGCCGA+AGG 0.634763 1_3:+74349305 Msa0140180:CDS
GGGAATCATTATGTTGCCGA+AGG 0.635911 1_3:+74349251 Msa0140180:CDS
GAGAGTTGCATTGAAGAAGG+AGG 0.635933 1_3:+74348163 Msa0140180:CDS
GAGAGTTGCATTGAAGAAGG+AGG 0.635933 1_3:+74353026 Msa0140180:CDS
AAAGCGACCTAGAGAATCCG+AGG 0.636201 1_3:+74353127 Msa0140180:CDS
CCCAAGTAAATTCTGACGCG+GGG 0.636570 1_3:+74349231 Msa0140180:CDS
AGAGTTGCATTGAAGAAGGA+GGG 0.637310 1_3:+74348164 Msa0140180:CDS
AGAGTTGCATTGAAGAAGGA+GGG 0.637310 1_3:+74353027 Msa0140180:CDS
TGAGCAACTGAGAGAATCCG+TGG 0.638615 1_3:+74353328 Msa0140180:CDS
CCGAGGATGCTATAGACACA+TGG 0.638651 1_3:+74350137 Msa0140180:CDS
CCGAGGATGCTATAGACACA+TGG 0.641134 1_3:+74355136 Msa0140180:CDS
AAAGCAACCAAGTGAATCCG+AGG 0.642797 1_3:+74353793 Msa0140180:CDS
GGGTAGTGGTAAAAGAGGGA+TGG 0.643359 1_3:+74353985 Msa0140180:CDS
GGCTTCTGGTAAGAAAGGGA+AGG 0.643581 1_3:+74348860 Msa0140180:CDS
CGAGACCTAAACAACTGAGG+TGG 0.644826 1_3:-74349439 None:intergenic
TAACAATGTTGTCAAAAGAG+GGG 0.650034 1_3:+74348983 Msa0140180:CDS
GTATCTTGTTGGGAGATGGA+AGG 0.650656 1_3:+74349108 Msa0140180:CDS
GGAGCGACAGAGAAAATCTG+AGG 0.653734 1_3:+74353193 Msa0140180:CDS
CATCACTGATAAAAGAGCAA+CGG 0.654608 1_3:+74353714 Msa0140180:CDS
AGGATATAAATCTAGTCACA+TGG 0.655176 1_3:+74354594 Msa0140180:CDS
TGCCCAAGTAAATTCTGACG+CGG 0.656719 1_3:+74349229 Msa0140180:CDS
TCCGAGGTATCAGTAGCAAG+AGG 0.658945 1_3:+74353479 Msa0140180:CDS
AGTGCAACCGAAGGAATCCG+AGG 0.659623 1_3:+74353463 Msa0140180:CDS
AAGGAACAATATCGAAGACA+AGG 0.663403 1_3:+74350037 Msa0140180:CDS
GAGAATGGTACCGCTTAACA+GGG 0.663915 1_3:+74347969 Msa0140180:CDS
GGGAAGGTATCAAAGACGGA+AGG 0.682930 1_3:+74348876 Msa0140180:CDS
AATGGAGGAAGTGATTTCGG+TGG 0.688617 1_3:+74354960 Msa0140180:CDS
GATCAAGATCTAAACAACTG+AGG 0.693653 1_3:-74354417 None:intergenic
GCTGGATTTAAGGATCACGC+TGG 0.704084 1_3:+74354184 Msa0140180:CDS
GTGAATAGTGATGATGATGG+CGG 0.708734 1_3:+74354745 Msa0140180:CDS
ACAATCGAAAGAGCTACCGA+GGG 0.709602 1_3:+74348374 Msa0140180:CDS
GAAACCGAGAGAATCCAAGG+AGG 0.723363 1_3:+74348452 Msa0140180:CDS
TGTTGATAATGTAGTAACCG+TGG 0.738318 1_3:-74353906 None:intergenic
TGTGTCTATAGCATCCTCGG+AGG 0.760446 1_3:-74350134 None:intergenic
GCCACCAATAAAGAACATCG+AGG 0.783033 1_3:+74355030 Msa0140180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATCTTAGAATTTTA+TGG + chr1_3:74351225-74351244 Msa0140180:intron 10.0%
!! TAATAGTATTATTATTTGAT+AGG + chr1_3:74352306-74352325 Msa0140180:intron 10.0%
!! TTCAATCTTATAATGAATAT+GGG - chr1_3:74350794-74350813 None:intergenic 15.0%
!! TTTCAATCTTATAATGAATA+TGG - chr1_3:74350795-74350814 None:intergenic 15.0%
!! CAAAATTCAAAATTATAAGT+TGG - chr1_3:74350881-74350900 None:intergenic 15.0%
!!! TATAATGTTTTTCCAAAATA+AGG - chr1_3:74351028-74351047 None:intergenic 15.0%
!! TAATCAACAAATCAAATTTA+TGG + chr1_3:74351134-74351153 Msa0140180:intron 15.0%
!!! AACCTTAAAAATAAGTTTTA+TGG + chr1_3:74351459-74351478 Msa0140180:intron 15.0%
!!! ACCTTAAAAATAAGTTTTAT+GGG + chr1_3:74351460-74351479 Msa0140180:intron 15.0%
!!! TAATTTTTTTATGTTGAGAA+AGG + chr1_3:74351611-74351630 Msa0140180:intron 15.0%
!! CTAAAAATTGTTCAAAAATT+AGG - chr1_3:74351689-74351708 None:intergenic 15.0%
!!! CTAATTTTTGAACAATTTTT+AGG + chr1_3:74351687-74351706 Msa0140180:intron 15.0%
!! ATAAGATTCAATTTAGTATT+AGG + chr1_3:74355285-74355304 Msa0140180:CDS 15.0%
!! TAAATTTGAATCAGAAGTTA+CGG + chr1_3:74348716-74348735 Msa0140180:intron 20.0%
!! TATAATGAAGAAAAATTCAG+AGG + chr1_3:74348839-74348858 Msa0140180:CDS 20.0%
!!! TAATGTGATTTTAGAGAAAA+TGG + chr1_3:74349943-74349962 Msa0140180:intron 20.0%
!!! AATGTGATTTTAGAGAAAAT+GGG + chr1_3:74349944-74349963 Msa0140180:intron 20.0%
!! TATAAGAATTTATGGTCAAA+AGG + chr1_3:74349988-74350007 Msa0140180:CDS 20.0%
!!! AGTCATAAAAATGTTTTTGA+TGG + chr1_3:74350313-74350332 Msa0140180:intron 20.0%
!!! AATGATGTACTTTTTTTTCT+AGG + chr1_3:74350361-74350380 Msa0140180:intron 20.0%
!!! ATGATGTACTTTTTTTTCTA+GGG + chr1_3:74350362-74350381 Msa0140180:intron 20.0%
!!! AACATTTGTTAACTCTTATA+CGG + chr1_3:74350632-74350651 Msa0140180:intron 20.0%
!!! GAAGTTATTTTTATCATTAC+AGG + chr1_3:74350658-74350677 Msa0140180:intron 20.0%
!!! ATTTTTATCATTACAGGATT+TGG + chr1_3:74350664-74350683 Msa0140180:intron 20.0%
!!! TCATATTTAAAATAGACATC+AGG - chr1_3:74350844-74350863 None:intergenic 20.0%
!!! AATTATAAGTTGGAAAGTAA+TGG - chr1_3:74350871-74350890 None:intergenic 20.0%
!! AAAAGTTTACATGAAAATTG+AGG + chr1_3:74351047-74351066 Msa0140180:intron 20.0%
!! AACAAATCAAATTTATGGTT+GGG + chr1_3:74351139-74351158 Msa0140180:intron 20.0%
!!! CCTTAAAAATAAGTTTTATG+GGG + chr1_3:74351461-74351480 Msa0140180:intron 20.0%
!!! TTTTAACCTCTTAGAATTTA+TGG - chr1_3:74351502-74351521 None:intergenic 20.0%
!! CGTTGATCATAAAAATAAAA+AGG + chr1_3:74351556-74351575 Msa0140180:intron 20.0%
!!! CTTTTTTTCTTTTCTTTTGA+GGG - chr1_3:74351584-74351603 None:intergenic 20.0%
!! AATTGTCAAACATATTTCTT+GGG + chr1_3:74351733-74351752 Msa0140180:intron 20.0%
!!! TTAATCTCATTCTTGTTTTA+AGG + chr1_3:74351991-74352010 Msa0140180:intron 20.0%
!! CTAATATTGTTTGTATTGAA+AGG - chr1_3:74352050-74352069 None:intergenic 20.0%
!! AAAACTCTATTGTACATATA+TGG + chr1_3:74352372-74352391 Msa0140180:intron 20.0%
!! ATAAAACTAAAGCCTAATTA+GGG + chr1_3:74352410-74352429 Msa0140180:intron 20.0%
!! ATTTGTTTACTTAAGATTCA+AGG - chr1_3:74352504-74352523 None:intergenic 20.0%
!!! AATTGAGTTTTATTTTCGTT+GGG + chr1_3:74352629-74352648 Msa0140180:intron 20.0%
!!! TATTAAATAGAGAAGGTATA+AGG + chr1_3:74354008-74354027 Msa0140180:CDS 20.0%
!!! ATTAAATAGAGAAGGTATAA+GGG + chr1_3:74354009-74354028 Msa0140180:CDS 20.0%
!!! GTTGATAAAGAATAAAGTTT+TGG + chr1_3:74354054-74354073 Msa0140180:CDS 20.0%
!! AACAAGAATATTGTTATCAT+TGG - chr1_3:74354527-74354546 None:intergenic 20.0%
!! GTAATGTTAAAAAGAAGAAT+TGG + chr1_3:74354620-74354639 Msa0140180:CDS 20.0%
!! TATTACTTTCTTAGAATTTC+AGG + chr1_3:74355215-74355234 Msa0140180:CDS 20.0%
!! ACTAAATTGAATCTTATCAA+AGG - chr1_3:74355282-74355301 None:intergenic 20.0%
! AAAACAACATCTTCTTTCTT+TGG + chr1_3:74348042-74348061 Msa0140180:CDS 25.0%
! AAACAACATCTTCTTTCTTT+GGG + chr1_3:74348043-74348062 Msa0140180:CDS 25.0%
! ACATTGACAAAAATAGTAAG+TGG + chr1_3:74348080-74348099 Msa0140180:intron 25.0%
! CATTGACAAAAATAGTAAGT+GGG + chr1_3:74348081-74348100 Msa0140180:intron 25.0%
!! AGGCTTTTCTAATAGTAATA+TGG - chr1_3:74348141-74348160 None:intergenic 25.0%
! GATGTTAATAAAGCTATAGT+AGG + chr1_3:74348654-74348673 Msa0140180:intron 25.0%
! TAATAAAGCTATAGTAGGTA+CGG + chr1_3:74348659-74348678 Msa0140180:intron 25.0%
!!! GGTTTTAAAAACGAGTTTAA+TGG + chr1_3:74348767-74348786 Msa0140180:CDS 25.0%
!!! GTTGATAAAGAATCAAGTTT+TGG + chr1_3:74348929-74348948 Msa0140180:intron 25.0%
! TGTTTGTTCTATTTGTGATT+TGG + chr1_3:74349376-74349395 Msa0140180:CDS 25.0%
! GTTTGTTCTATTTGTGATTT+GGG + chr1_3:74349377-74349396 Msa0140180:CDS 25.0%
! TAACAACTTCTTTAGACATA+AGG - chr1_3:74349699-74349718 None:intergenic 25.0%
! TTATGTCTAAAGAAGTTGTT+AGG + chr1_3:74349698-74349717 Msa0140180:intron 25.0%
! TATGTCTAAAGAAGTTGTTA+GGG + chr1_3:74349699-74349718 Msa0140180:intron 25.0%
!!! AAAGATGTTGTTTTTAGTAG+AGG + chr1_3:74349884-74349903 Msa0140180:CDS 25.0%
! GTTGCAACTATAAGAATTTA+TGG + chr1_3:74349980-74349999 Msa0140180:CDS 25.0%
!!! TTTGATGGTATAGTTTCTTT+TGG + chr1_3:74350328-74350347 Msa0140180:intron 25.0%
!! AAATTCAAACTATGATGGAA+TGG - chr1_3:74350468-74350487 None:intergenic 25.0%
! CACTAAAATTCAAACTATGA+TGG - chr1_3:74350473-74350492 None:intergenic 25.0%
!! ACATTTGTTAACTCTTATAC+GGG + chr1_3:74350633-74350652 Msa0140180:intron 25.0%
! AGAACAAAATTGTGTAACTA+AGG - chr1_3:74350690-74350709 None:intergenic 25.0%
!! ATTTAAAATAGACATCAGGT+CGG - chr1_3:74350840-74350859 None:intergenic 25.0%
! TCAATTAACATTAACGACAA+AGG - chr1_3:74350922-74350941 None:intergenic 25.0%
! ATTACTAAGATCTGTAAATC+AGG + chr1_3:74350964-74350983 Msa0140180:intron 25.0%
! CAACAAATCAAATTTATGGT+TGG + chr1_3:74351138-74351157 Msa0140180:intron 25.0%
! TTTGATACCATGTTGAAATT+GGG + chr1_3:74351428-74351447 Msa0140180:intron 25.0%
!!! CCCCATAAAACTTATTTTTA+AGG - chr1_3:74351464-74351483 None:intergenic 25.0%
!!! CCTTTTTTTCTTTTCTTTTG+AGG - chr1_3:74351585-74351604 None:intergenic 25.0%
! CCTCAAAAGAAAAGAAAAAA+AGG + chr1_3:74351582-74351601 Msa0140180:intron 25.0%
!!! TTTAGGTTTTTCAGAAGTTT+AGG + chr1_3:74351704-74351723 Msa0140180:intron 25.0%
! CAATTGTCAAACATATTTCT+TGG + chr1_3:74351732-74351751 Msa0140180:intron 25.0%
!! ACAATAAAACCTGTATTTTG+TGG - chr1_3:74351824-74351843 None:intergenic 25.0%
!!! CTTGTTTTAAGGTCAATTAA+TGG + chr1_3:74352002-74352021 Msa0140180:intron 25.0%
! CATAAAACTAAAGCCTAATT+AGG + chr1_3:74352409-74352428 Msa0140180:intron 25.0%
!! AATTTACCATTTACCTTTTG+TGG - chr1_3:74352465-74352484 None:intergenic 25.0%
! CAAAAGGTAAATGGTAAATT+TGG + chr1_3:74352465-74352484 Msa0140180:intron 25.0%
!! GAATTAATATGCATTTGTTG+TGG + chr1_3:74352606-74352625 Msa0140180:intron 25.0%
!!! GAATTGAGTTTTATTTTCGT+TGG + chr1_3:74352628-74352647 Msa0140180:intron 25.0%
!!! ATTGAGTTTTATTTTCGTTG+GGG + chr1_3:74352630-74352649 Msa0140180:intron 25.0%
!!! AATTATGTTTTTGTGCAGAT+TGG + chr1_3:74352723-74352742 Msa0140180:intron 25.0%
!!! ATGAATTGAAGTTTTTGGTA+TGG + chr1_3:74352749-74352768 Msa0140180:intron 25.0%
! AAAACAACATCTTCTTTCTT+TGG + chr1_3:74348042-74348061 Msa0140180:CDS 25.0%
! AAACAACATCTTCTTTCTTT+GGG + chr1_3:74348043-74348062 Msa0140180:CDS 25.0%
!!! AGGCTTTTTTAAGAGTAATA+TGG - chr1_3:74353004-74353023 None:intergenic 25.0%
! TTTAACAGAAATGAAACTAG+AGG - chr1_3:74353882-74353901 None:intergenic 25.0%
! TACTACATTATCAACATCAA+TGG + chr1_3:74353913-74353932 Msa0140180:CDS 25.0%
!!! AAGAATAAAGTTTTGGTTTC+AGG + chr1_3:74354061-74354080 Msa0140180:CDS 25.0%
!!! AGAATAAAGTTTTGGTTTCA+GGG + chr1_3:74354062-74354081 Msa0140180:CDS 25.0%
!! TGGTTTCTATAATGTGATTT+TGG + chr1_3:74349934-74349953 Msa0140180:intron 25.0%
!!! TAATGTGATTTTGGAGAAAA+TGG + chr1_3:74354942-74354961 Msa0140180:CDS 25.0%
!! TCAGGTTTTATGTTGATATC+AGG - chr1_3:74347929-74347948 None:intergenic 30.0%
GTTATACTTCTCCTAACAAT+GGG + chr1_3:74348110-74348129 Msa0140180:CDS 30.0%
! ATATGGTTTTTCCCATTGTT+AGG - chr1_3:74348124-74348143 None:intergenic 30.0%
!! TATAGCTTTATTAACATCCC+CGG - chr1_3:74348652-74348671 None:intergenic 30.0%
CTGATTCAAATTTACTCACA+TGG - chr1_3:74348710-74348729 None:intergenic 30.0%
TTTAATGGAGAAGAATTCAG+AGG + chr1_3:74348782-74348801 Msa0140180:CDS 30.0%
!!! AAGAATCAAGTTTTGGTTTC+AGG + chr1_3:74348936-74348955 Msa0140180:intron 30.0%
!!! AGAATCAAGTTTTGGTTTCA+GGG + chr1_3:74348937-74348956 Msa0140180:intron 30.0%
AGTAACAATGTTGTCAAAAG+AGG + chr1_3:74348981-74349000 Msa0140180:CDS 30.0%
GTAACAATGTTGTCAAAAGA+GGG + chr1_3:74348982-74349001 Msa0140180:CDS 30.0%
TAACAATGTTGTCAAAAGAG+GGG + chr1_3:74348983-74349002 Msa0140180:CDS 30.0%
CGTGTTAATTTCAATATCAC+TGG + chr1_3:74349041-74349060 Msa0140180:CDS 30.0%
TTTCAATATCACTGGATTTG+AGG + chr1_3:74349049-74349068 Msa0140180:CDS 30.0%
TTGCACTTCAAAATTTCCTT+CGG - chr1_3:74349270-74349289 None:intergenic 30.0%
AACAGTATCGTTATTTGCTT+TGG - chr1_3:74349360-74349379 None:intergenic 30.0%
! CATATTTTGCAACAACATGT+TGG - chr1_3:74349494-74349513 None:intergenic 30.0%
AAAGAAGAGAAAGTTGAATG+TGG + chr1_3:74349796-74349815 Msa0140180:CDS 30.0%
! CAGATAAAGCATCAATAGTT+GGG - chr1_3:74349850-74349869 None:intergenic 30.0%
GAAAATGGGTAAAGTCATTT+CGG + chr1_3:74349958-74349977 Msa0140180:CDS 30.0%
ATATTGATACTGACACCATT+TGG + chr1_3:74350516-74350535 Msa0140180:intron 30.0%
! TTTAAAATAGACATCAGGTC+GGG - chr1_3:74350839-74350858 None:intergenic 30.0%
! ATTAACGACAAAGGTATAGT+TGG - chr1_3:74350913-74350932 None:intergenic 30.0%
AGATCTGTAAATCAGGAAAA+AGG + chr1_3:74350971-74350990 Msa0140180:intron 30.0%
!! AAATAAGGTATCGATGACAT+TGG - chr1_3:74351013-74351032 None:intergenic 30.0%
!! ATGTCATCGATACCTTATTT+TGG + chr1_3:74351013-74351032 Msa0140180:intron 30.0%
! TGGTATCAAAGTCTATTTTC+AGG - chr1_3:74351418-74351437 None:intergenic 30.0%
CTTTGATACCATGTTGAAAT+TGG + chr1_3:74351427-74351446 Msa0140180:intron 30.0%
AATTAGACCCAATTTCAACA+TGG - chr1_3:74351438-74351457 None:intergenic 30.0%
!! AAGTTTTATGGGGTTCTATT+AGG + chr1_3:74351471-74351490 Msa0140180:intron 30.0%
AACCTCTTAGAATTTATGGT+TGG - chr1_3:74351498-74351517 None:intergenic 30.0%
ACAATAAAACCTACCTTTGT+GGG - chr1_3:74351776-74351795 None:intergenic 30.0%
AACAATAAAACCTACCTTTG+TGG - chr1_3:74351777-74351796 None:intergenic 30.0%
AACCTAAATCCACAAAATAC+AGG + chr1_3:74351812-74351831 Msa0140180:intron 30.0%
! AACCTGTATTTTGTGGATTT+AGG - chr1_3:74351817-74351836 None:intergenic 30.0%
AGCAAAAAAAGAAGAGAAGT+AGG - chr1_3:74351928-74351947 None:intergenic 30.0%
TTAGAATTATTCCAAGAGTG+AGG + chr1_3:74352086-74352105 Msa0140180:intron 30.0%
TTAAAATGAATGACCAGACA+AGG - chr1_3:74352289-74352308 None:intergenic 30.0%
TACAAATTCTGTCCCTAATT+AGG - chr1_3:74352425-74352444 None:intergenic 30.0%
AAGGTAAATGGTAAATTTGG+AGG + chr1_3:74352468-74352487 Msa0140180:intron 30.0%
TTTACTTAAGATTCAAGGCT+TGG - chr1_3:74352499-74352518 None:intergenic 30.0%
CACTGTAATAAATCAAGCAT+AGG + chr1_3:74352540-74352559 Msa0140180:intron 30.0%
! GGTACATGAATTGAAGTTTT+TGG + chr1_3:74352744-74352763 Msa0140180:intron 30.0%
CTTTGGTACATTGACAAAAA+TGG + chr1_3:74352936-74352955 Msa0140180:CDS 30.0%
GTTATACTTCTCCTAACAAT+GGG + chr1_3:74348110-74348129 Msa0140180:CDS 30.0%
! ATATGGTTTTTCCCATTGTT+AGG - chr1_3:74348124-74348143 None:intergenic 30.0%
CGACAACAACATCAATATAT+TGG + chr1_3:74353288-74353307 Msa0140180:CDS 30.0%
CTCATTAGAAGTCAATTCAA+AGG - chr1_3:74353849-74353868 None:intergenic 30.0%
! CTTTGAATTGACTTCTAATG+AGG + chr1_3:74353847-74353866 Msa0140180:CDS 30.0%
CATTTCTGTTAAAAAAGCCA+CGG + chr1_3:74353889-74353908 Msa0140180:CDS 30.0%
TAAACCGGAAGTTACTAATT+CGG + chr1_3:74353961-74353980 Msa0140180:CDS 30.0%
!! AAAGGTATTCACTTGTTTCT+TGG + chr1_3:74354032-74354051 Msa0140180:CDS 30.0%
!!! AATTTTAATTTCACTCTCGC+TGG + chr1_3:74354166-74354185 Msa0140180:CDS 30.0%
!! ATTTGCTTCATAGTTTGCTT+CGG - chr1_3:74354323-74354342 None:intergenic 30.0%
GATACTGTTTGTTCTATTTG+TGG + chr1_3:74349371-74349390 Msa0140180:CDS 30.0%
! GTTTGTTCTATTTGTGGTTT+TGG + chr1_3:74354352-74354371 Msa0140180:CDS 30.0%
! CATATTTTGCAACAACAAGT+TGG - chr1_3:74354469-74354488 None:intergenic 30.0%
! GTACATTCTTGTTTACGTTT+AGG - chr1_3:74354499-74354518 None:intergenic 30.0%
AGGATATAAATCTAGTCACA+TGG + chr1_3:74354594-74354613 Msa0140180:CDS 30.0%
TATGTCTAAAGAAGCTATTG+TGG + chr1_3:74354674-74354693 Msa0140180:CDS 30.0%
! AATGTGAATAGTGATGATGA+TGG + chr1_3:74354742-74354761 Msa0140180:CDS 30.0%
! AAAGAAGCGTAAGTTAAATG+TGG + chr1_3:74354795-74354814 Msa0140180:CDS 30.0%
!!! CAAAATCTTTTGGTTTTGAG+AGG + chr1_3:74355160-74355179 Msa0140180:CDS 30.0%
AATCTTATCAAAGGCCATTT+AGG - chr1_3:74355273-74355292 None:intergenic 30.0%
!! GGTTTTATGTTGATATCAGG+AGG - chr1_3:74347926-74347945 None:intergenic 35.0%
!! AAGTGCTGGTAGAAAGAATT+TGG + chr1_3:74348009-74348028 Msa0140180:CDS 35.0%
AACATCTTCTTTCTTTGGGT+TGG + chr1_3:74348047-74348066 Msa0140180:intron 35.0%
!!! TTTCTTTGGGTTGGAAGTTT+TGG + chr1_3:74348056-74348075 Msa0140180:intron 35.0%
CGTTATACTTCTCCTAACAA+TGG + chr1_3:74348109-74348128 Msa0140180:CDS 35.0%
!!! AATCTCTTTTTCAACCGTAG+TGG - chr1_3:74348240-74348259 None:intergenic 35.0%
TGTTGTTCTTTCTGTTTCCT+CGG - chr1_3:74348271-74348290 None:intergenic 35.0%
! GTCATCAGAAGTTGATTCAT+CGG - chr1_3:74348565-74348584 None:intergenic 35.0%
! ATCAGAAGTTGATTCAGAAC+TGG - chr1_3:74348607-74348626 None:intergenic 35.0%
TTCTGAATCAACTTCTGATG+AGG + chr1_3:74348608-74348627 Msa0140180:intron 35.0%
TGAATCAGAAGTTACGGATT+CGG + chr1_3:74348722-74348741 Msa0140180:intron 35.0%
AGGTAGTGATAAAAGAGGAA+AGG + chr1_3:74348746-74348765 Msa0140180:intron 35.0%
AAGAAAAATTCAGAGGCTTC+TGG + chr1_3:74348846-74348865 Msa0140180:CDS 35.0%
!! GAAGGTATTCACTTGTTTCT+TGG + chr1_3:74348907-74348926 Msa0140180:intron 35.0%
AACAATGTTGTCAAAAGAGG+GGG + chr1_3:74348984-74349003 Msa0140180:CDS 35.0%
TTAGTTCACGTGATGAAAAG+CGG + chr1_3:74349159-74349178 Msa0140180:intron 35.0%
!! TGCAAGTAAATTCTGAAGCA+GGG + chr1_3:74349285-74349304 Msa0140180:CDS 35.0%
! TGTTCTATTTGTGATTTGGG+AGG + chr1_3:74349380-74349399 Msa0140180:CDS 35.0%
ACACATTCTTGCTTGCATTT+GGG - chr1_3:74349524-74349543 None:intergenic 35.0%
TACACATTCTTGCTTGCATT+TGG - chr1_3:74349525-74349544 None:intergenic 35.0%
! TCTTGTTTGTGTTCAATGTG+CGG + chr1_3:74349565-74349584 Msa0140180:CDS 35.0%
! TGTGCGGAAAAGTTTCATTT+TGG + chr1_3:74349581-74349600 Msa0140180:CDS 35.0%
! GTGCGGAAAAGTTTCATTTT+GGG + chr1_3:74349582-74349601 Msa0140180:CDS 35.0%
!! GTTTCATTTTGGGTGTGTAA+AGG + chr1_3:74349592-74349611 Msa0140180:CDS 35.0%
GTTGTTAGGGAAACCAATAA+CGG + chr1_3:74349712-74349731 Msa0140180:CDS 35.0%
! CCAGATAAAGCATCAATAGT+TGG - chr1_3:74349851-74349870 None:intergenic 35.0%
CCAACTATTGATGCTTTATC+TGG + chr1_3:74349848-74349867 Msa0140180:CDS 35.0%
CATAAACGCTTGAACTTTCA+TGG + chr1_3:74349914-74349933 Msa0140180:CDS 35.0%
TTGTCTTCGATATTGTTCCT+TGG - chr1_3:74350038-74350057 None:intergenic 35.0%
AAGGAACAATATCGAAGACA+AGG + chr1_3:74350037-74350056 Msa0140180:CDS 35.0%
AAATTGACACTTGTCTTCTC+TGG - chr1_3:74350191-74350210 None:intergenic 35.0%
TAGGTCTATTCAGGGATTTA+AGG - chr1_3:74350255-74350274 None:intergenic 35.0%
AACTACCATCAAGCAATACA+AGG - chr1_3:74350283-74350302 None:intergenic 35.0%
GGATCACAGCAAAACATAAA+AGG - chr1_3:74350447-74350466 None:intergenic 35.0%
CTCTATTCTCTAACACCAAA+TGG - chr1_3:74350534-74350553 None:intergenic 35.0%
CTGCATTTATGTCAAACTGT+TGG + chr1_3:74350713-74350732 Msa0140180:intron 35.0%
! AGGTCGGGTTGTATTTAATT+TGG - chr1_3:74350824-74350843 None:intergenic 35.0%
! ATTTTGTTCAGCTTCCAAGT+CGG - chr1_3:74351276-74351295 None:intergenic 35.0%
GAAAAACTCAAGTCTCATGT+TGG - chr1_3:74351335-74351354 None:intergenic 35.0%
TCAATAGTGTTAAACGTGAG+GGG - chr1_3:74351366-74351385 None:intergenic 35.0%
CTCAATAGTGTTAAACGTGA+GGG - chr1_3:74351367-74351386 None:intergenic 35.0%
ACGTTTAACACTATTGAGCT+TGG + chr1_3:74351369-74351388 Msa0140180:intron 35.0%
GTCCAACCATAAATTCTAAG+AGG + chr1_3:74351493-74351512 Msa0140180:intron 35.0%
ACTAAAACCTAAACCCACAA+AGG + chr1_3:74351760-74351779 Msa0140180:intron 35.0%
GAAAGAAACAGGAATAGAAG+GGG - chr1_3:74351860-74351879 None:intergenic 35.0%
GGAAAGAAACAGGAATAGAA+GGG - chr1_3:74351861-74351880 None:intergenic 35.0%
! GAAGGTTGACTCAATTGATA+AGG + chr1_3:74352119-74352138 Msa0140180:intron 35.0%
! AAGGAGTTGATTCATCAGTA+AGG + chr1_3:74352138-74352157 Msa0140180:intron 35.0%
CAACAGAGATACTTACAAAC+CGG - chr1_3:74352180-74352199 None:intergenic 35.0%
TAGTTTGATCCTTGAAAAGC+TGG - chr1_3:74352206-74352225 None:intergenic 35.0%
TCACATAAGGAGTGATAAAG+AGG - chr1_3:74352233-74352252 None:intergenic 35.0%
TTCATTTCAACATCCTTGTC+TGG + chr1_3:74352273-74352292 Msa0140180:intron 35.0%
GATAGGAACTCTATATCGAA+AGG + chr1_3:74352323-74352342 Msa0140180:intron 35.0%
ATCAAAGCATATGCCACAAA+AGG + chr1_3:74352449-74352468 Msa0140180:intron 35.0%
CATATGCCACAAAAGGTAAA+TGG + chr1_3:74352456-74352475 Msa0140180:intron 35.0%
!! TAAAGATAGTGCTGGTAGAA+AGG + chr1_3:74352866-74352885 Msa0140180:CDS 35.0%
AACATCTTCTTTCTTTGGGT+TGG + chr1_3:74348047-74348066 Msa0140180:intron 35.0%
GGTACATTGACAAAAATGGT+AGG + chr1_3:74352940-74352959 Msa0140180:CDS 35.0%
ACATTGACAAAAATGGTAGG+AGG + chr1_3:74352943-74352962 Msa0140180:CDS 35.0%
CATTGACAAAAATGGTAGGA+GGG + chr1_3:74352944-74352963 Msa0140180:CDS 35.0%
CGTTATACTTCTCCTAACAA+TGG + chr1_3:74348109-74348128 Msa0140180:CDS 35.0%
ATTATTGTTGCTGCTGTTAC+TGG - chr1_3:74353083-74353102 None:intergenic 35.0%
! TTTTTCTCAACTACAGCTGA+AGG + chr1_3:74353172-74353191 Msa0140180:CDS 35.0%
! TCGCTCTTTAGAAAGTAAAC+AGG - chr1_3:74353246-74353265 None:intergenic 35.0%
GGTTTCTCTTTCAACTGTAA+TGG - chr1_3:74353584-74353603 None:intergenic 35.0%
CATCACTGATAAAAGAGCAA+CGG + chr1_3:74353714-74353733 Msa0140180:CDS 35.0%
!! TGTTGATAATGTAGTAACCG+TGG - chr1_3:74353909-74353928 None:intergenic 35.0%
GCATGTGATTCAATCTAAAC+CGG + chr1_3:74353946-74353965 Msa0140180:CDS 35.0%
GGGATGGTATTAAATAGAGA+AGG + chr1_3:74354001-74354020 Msa0140180:CDS 35.0%
! ATAGAGAAGGTATAAGGGAA+AGG + chr1_3:74354014-74354033 Msa0140180:CDS 35.0%
AGTCACAATGTTGTTACAAG+CGG + chr1_3:74354106-74354125 Msa0140180:CDS 35.0%
! AAGATACTAGTGGATGATGT+AGG - chr1_3:74354220-74354239 None:intergenic 35.0%
ATCATCCACTAGTATCTTCT+TGG + chr1_3:74354222-74354241 Msa0140180:CDS 35.0%
ATCTTCCAAGAAGATACTAG+TGG - chr1_3:74354230-74354249 None:intergenic 35.0%
ACTAGTATCTTCTTGGAAGA+TGG + chr1_3:74354229-74354248 Msa0140180:CDS 35.0%
!!! TGTTCTATTTGTGGTTTTGG+AGG + chr1_3:74354355-74354374 Msa0140180:CDS 35.0%
GATCAAGATCTAAACAACTG+AGG - chr1_3:74354420-74354439 None:intergenic 35.0%
TTTAGATCTTGATCGAGTTC+CGG + chr1_3:74354426-74354445 Msa0140180:CDS 35.0%
TGTGAGCAGAAATTTCACTT+TGG + chr1_3:74354556-74354575 Msa0140180:CDS 35.0%
GTGAGCAGAAATTTCACTTT+GGG + chr1_3:74354557-74354576 Msa0140180:CDS 35.0%
ATTTCACTTTGGGTGTGTAA+AGG + chr1_3:74354567-74354586 Msa0140180:CDS 35.0%
! CCAGTTAAAGCATCAATTGT+TGG - chr1_3:74354850-74354869 None:intergenic 35.0%
CCAACAATTGATGCTTTAAC+TGG + chr1_3:74354847-74354866 Msa0140180:CDS 35.0%
!! TGTGATTTTGGAGAAAATGG+AGG + chr1_3:74354945-74354964 Msa0140180:CDS 35.0%
GAAAATGGAGGAAGTGATTT+CGG + chr1_3:74354957-74354976 Msa0140180:CDS 35.0%
CTTGTGACCATAAATCCTTA+TGG - chr1_3:74354989-74355008 None:intergenic 35.0%
CATAAGGATTTATGGTCACA+AGG + chr1_3:74354987-74355006 Msa0140180:CDS 35.0%
TTGTCCTCGATGTTCTTTAT+TGG - chr1_3:74355037-74355056 None:intergenic 35.0%
AATAAAGAACATCGAGGACA+AGG + chr1_3:74355036-74355055 Msa0140180:CDS 35.0%
! GACACATGGACAAAATCTTT+TGG + chr1_3:74355150-74355169 Msa0140180:CDS 35.0%
TAGGTTTCTTCAGTGGTTTA+AGG - chr1_3:74355254-74355273 None:intergenic 35.0%
AACCACTGAAGAAACCTAAA+TGG + chr1_3:74355256-74355275 Msa0140180:CDS 35.0%
TACCATTCTCTTACAGCTTC+TGG - chr1_3:74347959-74347978 None:intergenic 40.0%
! CAAGATCGTAAAGAAAGTGC+TGG + chr1_3:74347995-74348014 Msa0140180:CDS 40.0%
AGAGTTGCATTGAAGAAGGA+GGG + chr1_3:74348164-74348183 Msa0140180:CDS 40.0%
CAATTTCTTCGTCTCCACTA+CGG + chr1_3:74348223-74348242 Msa0140180:CDS 40.0%
AAAGAGATTGAGAGAATCCG+AGG + chr1_3:74348251-74348270 Msa0140180:CDS 40.0%
GGTAGCTCTTTCGATTGTAA+AGG - chr1_3:74348372-74348391 None:intergenic 40.0%
!! GATTCTGAAACCTCTAGTTC+CGG + chr1_3:74348630-74348649 Msa0140180:intron 40.0%
!! ATTCTGAAACCTCTAGTTCC+GGG + chr1_3:74348631-74348650 Msa0140180:intron 40.0%
AGGTACGGTATCAACATCAA+TGG + chr1_3:74348674-74348693 Msa0140180:intron 40.0%
TCGGTAGGTAGTGATAAAAG+AGG + chr1_3:74348741-74348760 Msa0140180:intron 40.0%
GAGAAGAATTCAGAGGATTG+TGG + chr1_3:74348789-74348808 Msa0140180:CDS 40.0%
!! GAAAGGGAAGGTATCAAAGA+CGG + chr1_3:74348872-74348891 Msa0140180:CDS 40.0%
!! AGAGGGGGTTTATTTTCTGA+TGG + chr1_3:74348999-74349018 Msa0140180:CDS 40.0%
ACCATCCACTAGTATCTTGT+TGG + chr1_3:74349097-74349116 Msa0140180:CDS 40.0%
CCATCCACTAGTATCTTGTT+GGG + chr1_3:74349098-74349117 Msa0140180:CDS 40.0%
ATCTCCCAACAAGATACTAG+TGG - chr1_3:74349105-74349124 None:intergenic 40.0%
ACTAGTATCTTGTTGGGAGA+TGG + chr1_3:74349104-74349123 Msa0140180:CDS 40.0%
!! CTGAAGCAAATTCTGAAGCA+GGG + chr1_3:74349195-74349214 Msa0140180:intron 40.0%
!! GTGCAAGTAAATTCTGAAGC+AGG + chr1_3:74349284-74349303 Msa0140180:CDS 40.0%
CCCTACTTCAGAATTTCCTT+CGG - chr1_3:74349324-74349343 None:intergenic 40.0%
!! CCGAAGGAAATTCTGAAGTA+GGG + chr1_3:74349321-74349340 Msa0140180:CDS 40.0%
TGCAAGCAAGAATGTGTAGA+TGG + chr1_3:74349527-74349546 Msa0140180:CDS 40.0%
! ATTCTTCTTTTCACCACTGC+TGG - chr1_3:74349645-74349664 None:intergenic 40.0%
GCAGTGGTGAAAAGAAGAAT+TGG + chr1_3:74349645-74349664 Msa0140180:CDS 40.0%
!! TGGTTTTGCAGTGTAGTTTG+TGG + chr1_3:74349665-74349684 Msa0140180:intron 40.0%
! AGATTAGCTGCAACCGTTAT+TGG - chr1_3:74349728-74349747 None:intergenic 40.0%
!!! CAAAAGCGTTTGGTTTTGCT+AGG + chr1_3:74350161-74350180 Msa0140180:intron 40.0%
AATCCCTGAATAGACCTACA+TGG + chr1_3:74350257-74350276 Msa0140180:intron 40.0%
AAGGGAGAGGAACACAATTA+TGG + chr1_3:74350570-74350589 Msa0140180:intron 40.0%
AAAGTGCAAGTGAAACACCA+AGG + chr1_3:74350596-74350615 Msa0140180:intron 40.0%
! TTAAACGTGAGGGGTGTATT+GGG - chr1_3:74351357-74351376 None:intergenic 40.0%
GCTCAATAGTGTTAAACGTG+AGG - chr1_3:74351368-74351387 None:intergenic 40.0%
!! GCTTGGTGCGTTGATATAAA+TGG + chr1_3:74351386-74351405 Msa0140180:intron 40.0%
! TGGTGCGTTGATATAAATGG+TGG + chr1_3:74351389-74351408 Msa0140180:intron 40.0%
AAACCTAAACCCACAAAGGT+AGG + chr1_3:74351764-74351783 Msa0140180:intron 40.0%
AAACCTACCTTTGTGGGTTT+AGG - chr1_3:74351770-74351789 None:intergenic 40.0%
GGGAAAGAAACAGGAATAGA+AGG - chr1_3:74351862-74351881 None:intergenic 40.0%
GAGAGGAAAGAGAAACAGAA+CGG - chr1_3:74351890-74351909 None:intergenic 40.0%
AAAACACCATGACACAAGCA+AGG - chr1_3:74351973-74351992 None:intergenic 40.0%
TATCACTCCTTATGTGATCG+AGG + chr1_3:74352236-74352255 Msa0140180:intron 40.0%
AGGCACTATGTTCATATCAG+GGG - chr1_3:74352790-74352809 None:intergenic 40.0%
CAGGCACTATGTTCATATCA+GGG - chr1_3:74352791-74352810 None:intergenic 40.0%
TCAGGCACTATGTTCATATC+AGG - chr1_3:74352792-74352811 None:intergenic 40.0%
GATCTTGTAGTCCTGTTAAG+CGG - chr1_3:74352845-74352864 None:intergenic 40.0%
CAAGATCGTAAAGATAGTGC+TGG + chr1_3:74352858-74352877 Msa0140180:CDS 40.0%
!! TTTCTTTGGGTTGGAAGCTT+TGG + chr1_3:74352919-74352938 Msa0140180:CDS 40.0%
AGAGTTGCATTGAAGAAGGA+GGG + chr1_3:74348164-74348183 Msa0140180:CDS 40.0%
AGTTGCTCATTCGACTGTAA+TGG - chr1_3:74353317-74353336 None:intergenic 40.0%
! CGTTGCTCTTTTATCAGTGA+TGG - chr1_3:74353716-74353735 None:intergenic 40.0%
!!! GGTTGCTTTTTCGACTGTAA+TGG - chr1_3:74353782-74353801 None:intergenic 40.0%
GTCACAATGTTGTTACAAGC+GGG + chr1_3:74354107-74354126 Msa0140180:CDS 40.0%
!! AGCGGGAGTATATTTTGTGA+TGG + chr1_3:74354124-74354143 Msa0140180:CDS 40.0%
TTTCACTCTCGCTGGATTTA+AGG + chr1_3:74354174-74354193 Msa0140180:CDS 40.0%
GTATCTTCTTGGAAGATGGA+AGG + chr1_3:74354233-74354252 Msa0140180:CDS 40.0%
GTCGTTGTTGGAATGTCAAA+GGG + chr1_3:74354255-74354274 Msa0140180:CDS 40.0%
CAAGATCTAAACAACTGAGG+TGG - chr1_3:74354417-74354436 None:intergenic 40.0%
GCTATTGTGGAAACCAGTTA+AGG + chr1_3:74354687-74354706 Msa0140180:CDS 40.0%
AGATTATCCGCAACCTTAAC+TGG - chr1_3:74354703-74354722 None:intergenic 40.0%
AGGTTGCGGATAATCTAACT+TGG + chr1_3:74354707-74354726 Msa0140180:CDS 40.0%
!! GTGAATAGTGATGATGATGG+CGG + chr1_3:74354745-74354764 Msa0140180:CDS 40.0%
! CATAAGCGCTTGAACTTTTG+TGG + chr1_3:74354913-74354932 Msa0140180:CDS 40.0%
GTGGCTACCATAAGGATTTA+TGG + chr1_3:74354979-74354998 Msa0140180:CDS 40.0%
TCCTCGATGTTCTTTATTGG+TGG - chr1_3:74355034-74355053 None:intergenic 40.0%
!! GAGAAACAATTGACTCGCTT+TGG + chr1_3:74355087-74355106 Msa0140180:CDS 40.0%
!!! TTTGGTTTTGAGAGGATGAC+AGG + chr1_3:74355168-74355187 Msa0140180:CDS 40.0%
GTCCAGAAGCTGTAAGAGAA+TGG + chr1_3:74347954-74347973 Msa0140180:CDS 45.0%
AGAGAATGGTACCGCTTAAC+AGG + chr1_3:74347968-74347987 Msa0140180:CDS 45.0%
GAGAATGGTACCGCTTAACA+GGG + chr1_3:74347969-74347988 Msa0140180:CDS 45.0%
GATCTTGTAGCCCTGTTAAG+CGG - chr1_3:74347982-74348001 None:intergenic 45.0%
TTCTTCAATGCAACTCTCGC+AGG - chr1_3:74348161-74348180 None:intergenic 45.0%
TGCGAGAGTTGCATTGAAGA+AGG + chr1_3:74348160-74348179 Msa0140180:CDS 45.0%
GAGAGTTGCATTGAAGAAGG+AGG + chr1_3:74348163-74348182 Msa0140180:CDS 45.0%
ACGTTGTTGCTGCAGTTGAA+GGG - chr1_3:74348203-74348222 None:intergenic 45.0%
!!! GGTCTCTTTTTCGACTGCAA+TGG - chr1_3:74348306-74348325 None:intergenic 45.0%
AAAGAGACCGAGAGAATCTG+AGG + chr1_3:74348317-74348336 Msa0140180:CDS 45.0%
! GCTGTTTCCTCAGATTCTCT+CGG - chr1_3:74348327-74348346 None:intergenic 45.0%
TACAATCGAAAGAGCTACCG+AGG + chr1_3:74348373-74348392 Msa0140180:CDS 45.0%
ACAATCGAAAGAGCTACCGA+GGG + chr1_3:74348374-74348393 Msa0140180:CDS 45.0%
CAGCAGCGACATCAATCTAT+TGG + chr1_3:74348409-74348428 Msa0140180:CDS 45.0%
TCTCTCGGTTTCTCTTTCGA+CGG - chr1_3:74348444-74348463 None:intergenic 45.0%
AGAGAAACCGAGAGAATCCA+AGG + chr1_3:74348449-74348468 Msa0140180:CDS 45.0%
! TGATATTGCTGCTGCTTCCT+CGG - chr1_3:74348529-74348548 None:intergenic 45.0%
TGATTCAGAACTGGCACTAG+AGG - chr1_3:74348598-74348617 None:intergenic 45.0%
!! TTCTGAAACCTCTAGTTCCG+GGG + chr1_3:74348632-74348651 Msa0140180:intron 45.0%
ATTAACATCCCCGGAACTAG+AGG - chr1_3:74348643-74348662 None:intergenic 45.0%
! TCAGAAGTTACGGATTCGGT+AGG + chr1_3:74348726-74348745 Msa0140180:intron 45.0%
TCAGAGGATTGTGGTAGAAG+AGG + chr1_3:74348798-74348817 Msa0140180:CDS 45.0%
CAGAGGATTGTGGTAGAAGA+GGG + chr1_3:74348799-74348818 Msa0140180:CDS 45.0%
TCAGAGGCTTCTGGTAAGAA+AGG + chr1_3:74348855-74348874 Msa0140180:CDS 45.0%
CAGAGGCTTCTGGTAAGAAA+GGG + chr1_3:74348856-74348875 Msa0140180:CDS 45.0%
TCAAAGACGGAAGGTGAAAG+AGG + chr1_3:74348885-74348904 Msa0140180:CDS 45.0%
GGGACTAATGTATTCTGTCG+TGG + chr1_3:74348957-74348976 Msa0140180:CDS 45.0%
CCCAACAAGATACTAGTGGA+TGG - chr1_3:74349101-74349120 None:intergenic 45.0%
GTATCTTGTTGGGAGATGGA+AGG + chr1_3:74349108-74349127 Msa0140180:CDS 45.0%
GTCGTTGTTGGACTGTCAAA+GGG + chr1_3:74349130-74349149 Msa0140180:CDS 45.0%
!! GCTGAAGCAAATTCTGAAGC+AGG + chr1_3:74349194-74349213 Msa0140180:intron 45.0%
TGCCCAAGTAAATTCTGACG+CGG + chr1_3:74349229-74349248 Msa0140180:CDS 45.0%
GGGAATCATTATGTTGCCGA+AGG + chr1_3:74349251-74349270 Msa0140180:CDS 45.0%
!! GCCGAAGGAAATTCTGAAGT+AGG + chr1_3:74349320-74349339 Msa0140180:CDS 45.0%
GCATTCCACCTCAGTTGTTT+AGG + chr1_3:74349434-74349453 Msa0140180:intron 45.0%
GATCGAGACCTAAACAACTG+AGG - chr1_3:74349445-74349464 None:intergenic 45.0%
TTTAGGTCTCGATCGAGTTC+CGG + chr1_3:74349451-74349470 Msa0140180:intron 45.0%
!! TTTGGGTGTGTAAAGGCGTT+AGG + chr1_3:74349599-74349618 Msa0140180:CDS 45.0%
!! TGTGTAAAGGCGTTAGGACT+TGG + chr1_3:74349605-74349624 Msa0140180:CDS 45.0%
CGGTTGCAGCTAATCTAACT+TGG + chr1_3:74349732-74349751 Msa0140180:CDS 45.0%
GGTAGCCACGAAAACTATCT+CGG - chr1_3:74350017-74350036 None:intergenic 45.0%
! GATAGTTTTCGTGGCTACCA+AGG + chr1_3:74350018-74350037 Msa0140180:CDS 45.0%
GAGAAACAGTTGACACGCTT+AGG + chr1_3:74350088-74350107 Msa0140180:CDS 45.0%
ACGCTTAGGAGTTGAAAGCT+TGG + chr1_3:74350102-74350121 Msa0140180:CDS 45.0%
CCATGTGTCTATAGCATCCT+CGG - chr1_3:74350140-74350159 None:intergenic 45.0%
!! GACACATGGACAAAAGCGTT+TGG + chr1_3:74350151-74350170 Msa0140180:CDS 45.0%
AGGCCATGTAGGTCTATTCA+GGG - chr1_3:74350263-74350282 None:intergenic 45.0%
AAGGCCATGTAGGTCTATTC+AGG - chr1_3:74350264-74350283 None:intergenic 45.0%
CAAGCAATACAAGGCCATGT+AGG - chr1_3:74350274-74350293 None:intergenic 45.0%
!! CATGGCCTTGTATTGCTTGA+TGG + chr1_3:74350275-74350294 Msa0140180:intron 45.0%
AGTACCATCGTCGAGCAAAA+GGG + chr1_3:74350552-74350571 Msa0140180:intron 45.0%
TGTTGCACGACAAAACACCT+TGG - chr1_3:74350616-74350635 None:intergenic 45.0%
ACATCCTCACAAAACCGACT+TGG + chr1_3:74351259-74351278 Msa0140180:intron 45.0%
! GTTAAACGTGAGGGGTGTAT+TGG - chr1_3:74351358-74351377 None:intergenic 45.0%
AGGAAAGAGAAACAGAACGG+CGG - chr1_3:74351887-74351906 None:intergenic 45.0%
AAGTAGGCTTACATGCATGC+AGG - chr1_3:74351912-74351931 None:intergenic 45.0%
CTCATACCTTGCTTGTGTCA+TGG + chr1_3:74351964-74351983 Msa0140180:intron 45.0%
TTGAGTCAACCTTCGTTGAC+TGG - chr1_3:74352113-74352132 None:intergenic 45.0%
GAAACCACCTCGATCACATA+AGG - chr1_3:74352246-74352265 None:intergenic 45.0%
GGCACTATGTTCATATCAGG+GGG - chr1_3:74352789-74352808 None:intergenic 45.0%
GTCCAGAAGCTGTAAGAGAA+TGG + chr1_3:74347954-74347973 Msa0140180:CDS 45.0%
CACCATTCTCTTACAGCTTC+TGG - chr1_3:74352822-74352841 None:intergenic 45.0%
TTCTTCAATGCAACTCTCGC+AGG - chr1_3:74348161-74348180 None:intergenic 45.0%
TGCGAGAGTTGCATTGAAGA+AGG + chr1_3:74348160-74348179 Msa0140180:CDS 45.0%
GAGAGTTGCATTGAAGAAGG+AGG + chr1_3:74348163-74348182 Msa0140180:CDS 45.0%
!! TGCAGTTGAAGGGTGTTTGA+GGG - chr1_3:74353057-74353076 None:intergenic 45.0%
!! TTACTGGTGCTGCAGTTGAA+GGG - chr1_3:74353067-74353086 None:intergenic 45.0%
! TGTTGTTGTCGCTTCTTCCT+CGG - chr1_3:74353279-74353298 None:intergenic 45.0%
AGTCGCTCTTTCGACTGTAA+TGG - chr1_3:74353386-74353405 None:intergenic 45.0%
ACTGATACCTCGGATTCCTT+CGG - chr1_3:74353473-74353492 None:intergenic 45.0%
TCCTCTTGCTACTGATACCT+CGG - chr1_3:74353483-74353502 None:intergenic 45.0%
AGTCGCTCAATCGACTGAAA+TGG - chr1_3:74353518-74353537 None:intergenic 45.0%
AGAGAAACCGAGAGAATCTG+AGG + chr1_3:74353595-74353614 Msa0140180:CDS 45.0%
ACTGCTTCCTCAGATTCTCT+CGG - chr1_3:74353605-74353624 None:intergenic 45.0%
AGTCGCTCTTTCGACTGTAA+TGG - chr1_3:74353386-74353405 None:intergenic 45.0%
AAAGCAACCAAGTGAATCCG+AGG + chr1_3:74353793-74353812 Msa0140180:CDS 45.0%
ACCGGAAGTTACTAATTCGG+TGG + chr1_3:74353964-74353983 Msa0140180:CDS 45.0%
CCCACCGAATTAGTAACTTC+CGG - chr1_3:74353968-74353987 None:intergenic 45.0%
CCGGAAGTTACTAATTCGGT+GGG + chr1_3:74353965-74353984 Msa0140180:CDS 45.0%
! GTTACTAATTCGGTGGGTAG+TGG + chr1_3:74353971-74353990 Msa0140180:CDS 45.0%
GGTCGTTGTTGGAATGTCAA+AGG + chr1_3:74354254-74354273 Msa0140180:CDS 45.0%
CAACTGAGGTGGAATACAGA+AGG - chr1_3:74354406-74354425 None:intergenic 45.0%
TTTGGGTGTGTAAAGGCAAC+AGG + chr1_3:74354574-74354593 Msa0140180:CDS 45.0%
! GCAATATAGTTTGCGCGAAC+AGG + chr1_3:74354647-74354666 Msa0140180:CDS 45.0%
GTGGAAACCAGTTAAGGTTG+CGG + chr1_3:74354693-74354712 Msa0140180:CDS 45.0%
AATGGAGGAAGTGATTTCGG+TGG + chr1_3:74354960-74354979 Msa0140180:CDS 45.0%
TGATTTCGGTGGCTACCATA+AGG + chr1_3:74354971-74354990 Msa0140180:CDS 45.0%
! GGTTGCTGAGATAGTTTTCG+TGG + chr1_3:74355008-74355027 Msa0140180:CDS 45.0%
GCCACCAATAAAGAACATCG+AGG + chr1_3:74355030-74355049 Msa0140180:CDS 45.0%
! AGGAATGCGTCGTTTGTTGA+TGG + chr1_3:74355056-74355075 Msa0140180:CDS 45.0%
!! TCGCTTTGGAGTAGAAAGCA+TGG + chr1_3:74355101-74355120 Msa0140180:CDS 45.0%
!! CATGGTTTTGCATTCATCCG+AGG + chr1_3:74355119-74355138 Msa0140180:CDS 45.0%
CCATGTGTCTATAGCATCCT+CGG - chr1_3:74350140-74350159 None:intergenic 45.0%
! GGCCATTTAGGTTTCTTCAG+TGG - chr1_3:74355261-74355280 None:intergenic 45.0%
!!! AAAACATATAATTATTTTTA+AGG + chr1_3:74351166-74351185 Msa0140180:intron 5.0%
ACAGCTTCTGGACAATGCTC+AGG - chr1_3:74347947-74347966 None:intergenic 50.0%
GACGTTGTTGCTGCAGTTGA+AGG - chr1_3:74348204-74348223 None:intergenic 50.0%
GGTTTCTCTTTCGACGGCAA+TGG - chr1_3:74348438-74348457 None:intergenic 50.0%
GAAACCGAGAGAATCCAAGG+AGG + chr1_3:74348452-74348471 Msa0140180:CDS 50.0%
GCTTCCTCCTTGGATTCTCT+CGG - chr1_3:74348459-74348478 None:intergenic 50.0%
! GATTCACTCGGTCGCTTTGA+CGG - chr1_3:74348507-74348526 None:intergenic 50.0%
TGGCACTAGAGGCTTCAGAA+TGG - chr1_3:74348587-74348606 None:intergenic 50.0%
GGCTTCTGGTAAGAAAGGGA+AGG + chr1_3:74348860-74348879 Msa0140180:CDS 50.0%
!! GGGAAGGTATCAAAGACGGA+AGG + chr1_3:74348876-74348895 Msa0140180:CDS 50.0%
AGACGGAAGGTGAAAGAGGA+AGG + chr1_3:74348889-74348908 Msa0140180:CDS 50.0%
! ACTGGATTTGAGGCTCATGC+TGG + chr1_3:74349059-74349078 Msa0140180:CDS 50.0%
GGTCGTTGTTGGACTGTCAA+AGG + chr1_3:74349129-74349148 Msa0140180:CDS 50.0%
GCCCAAGTAAATTCTGACGC+GGG + chr1_3:74349230-74349249 Msa0140180:CDS 50.0%
CCCCGCGTCAGAATTTACTT+GGG - chr1_3:74349234-74349253 None:intergenic 50.0%
CCCAAGTAAATTCTGACGCG+GGG + chr1_3:74349231-74349250 Msa0140180:CDS 50.0%
TCCCCGCGTCAGAATTTACT+TGG - chr1_3:74349235-74349254 None:intergenic 50.0%
GGGAATCATTCTGTTGCCGA+AGG + chr1_3:74349305-74349324 Msa0140180:CDS 50.0%
CAACTGAGGTGGAATGCAGA+AGG - chr1_3:74349431-74349450 None:intergenic 50.0%
CGAGACCTAAACAACTGAGG+TGG - chr1_3:74349442-74349461 None:intergenic 50.0%
ATCGAGTTCCGGATGGAGAT+TGG + chr1_3:74349462-74349481 Msa0140180:CDS 50.0%
GGACAGAACCAATCTCCATC+CGG - chr1_3:74349473-74349492 None:intergenic 50.0%
TCAAGTCACATTGCCAGCAG+TGG + chr1_3:74349629-74349648 Msa0140180:CDS 50.0%
! GGTTGCCGAGATAGTTTTCG+TGG + chr1_3:74350009-74350028 Msa0140180:CDS 50.0%
!!! CTTGGTTTTGCATTCCTCCG+AGG + chr1_3:74350120-74350139 Msa0140180:CDS 50.0%
TGTGTCTATAGCATCCTCGG+AGG - chr1_3:74350137-74350156 None:intergenic 50.0%
CCGAGGATGCTATAGACACA+TGG + chr1_3:74350137-74350156 Msa0140180:CDS 50.0%
GAGTACCATCGTCGAGCAAA+AGG + chr1_3:74350551-74350570 Msa0140180:intron 50.0%
!! GCTTCCAAGTCGGTTTTGTG+AGG - chr1_3:74351266-74351285 None:intergenic 50.0%
AGAGAAACAGAACGGCGGTA+GGG - chr1_3:74351882-74351901 None:intergenic 50.0%
AAGAGAAACAGAACGGCGGT+AGG - chr1_3:74351883-74351902 None:intergenic 50.0%
AGGTCGTGTTCAACTCTTGC+CGG + chr1_3:74352158-74352177 Msa0140180:intron 50.0%
! CTGTTGCTGCCAGCTTTTCA+AGG + chr1_3:74352194-74352213 Msa0140180:intron 50.0%
CACTCCTTATGTGATCGAGG+TGG + chr1_3:74352239-74352258 Msa0140180:intron 50.0%
ACAGCTTCTGGACAATGCTC+AGG - chr1_3:74347947-74347966 None:intergenic 50.0%
!! AGAGAATGGTGCCGCTTAAC+AGG + chr1_3:74352831-74352850 Msa0140180:CDS 50.0%
!! CTGCAGTTGAAGGGTGTTTG+AGG - chr1_3:74353058-74353077 None:intergenic 50.0%
!! GTTACTGGTGCTGCAGTTGA+AGG - chr1_3:74353068-74353087 None:intergenic 50.0%
!!! GGTCGCTTTTTCGACTGTGA+TGG - chr1_3:74353116-74353135 None:intergenic 50.0%
AAAGCGACCTAGAGAATCCG+AGG + chr1_3:74353127-74353146 Msa0140180:CDS 50.0%
ACTGCTTCCTCGGATTCTCT+AGG - chr1_3:74353137-74353156 None:intergenic 50.0%
TGCTCTAGCTACTGCTTCCT+CGG - chr1_3:74353147-74353166 None:intergenic 50.0%
GGAGCGACAGAGAAAATCTG+AGG + chr1_3:74353193-74353212 Msa0140180:CDS 50.0%
GCTTCTTCCTCGGATTCTCT+TGG - chr1_3:74353269-74353288 None:intergenic 50.0%
TGAGCAACTGAGAGAATCCG+TGG + chr1_3:74353328-74353347 Msa0140180:CDS 50.0%
! TGTTGTTGCTGCTGCTTCCA+CGG - chr1_3:74353348-74353367 None:intergenic 50.0%
AGAGCGACTGAGAGAATCTG+AGG + chr1_3:74353397-74353416 Msa0140180:CDS 50.0%
GGTTGCACTTTCAGCTGGAA+TGG - chr1_3:74353452-74353471 None:intergenic 50.0%
! TCCGAGGTATCAGTAGCAAG+AGG + chr1_3:74353479-74353498 Msa0140180:CDS 50.0%
!! ATTGAGCGACTGAGAGCATC+TGG + chr1_3:74353527-74353546 Msa0140180:CDS 50.0%
! TGCTATTGCTGCTGCTTCCT+CGG - chr1_3:74353813-74353832 None:intergenic 50.0%
! TCGGTGGGTAGTGGTAAAAG+AGG + chr1_3:74353980-74353999 Msa0140180:CDS 50.0%
! CGGTGGGTAGTGGTAAAAGA+GGG + chr1_3:74353981-74354000 Msa0140180:CDS 50.0%
! GGGTAGTGGTAAAAGAGGGA+TGG + chr1_3:74353985-74354004 Msa0140180:CDS 50.0%
GCTGGATTTAAGGATCACGC+TGG + chr1_3:74354184-74354203 Msa0140180:CDS 50.0%
GGAAGATGGAAGGTCGTTGT+TGG + chr1_3:74354243-74354262 Msa0140180:CDS 50.0%
GATCTTGATCGAGTTCCGGA+TGG + chr1_3:74354430-74354449 Msa0140180:CDS 50.0%
ATCGAGTTCCGGATGGTGAT+TGG + chr1_3:74354437-74354456 Msa0140180:CDS 50.0%
GGACAGAACCAATCACCATC+CGG - chr1_3:74354448-74354467 None:intergenic 50.0%
CCGAGGATGCTATAGACACA+TGG + chr1_3:74350137-74350156 Msa0140180:CDS 50.0%
!! TGCTGCAGTTGAAGGGCGTT+CGG - chr1_3:74348196-74348215 None:intergenic 55.0%
! TGATGTCGCTGCTGCTTCCT+GGG - chr1_3:74348403-74348422 None:intergenic 55.0%
! TTGATGTCGCTGCTGCTTCC+TGG - chr1_3:74348404-74348423 None:intergenic 55.0%
! AGTTGCTGCTGCTTCCTCCT+TGG - chr1_3:74348469-74348488 None:intergenic 55.0%
AAAGCGACCGAGTGAATCCG+AGG + chr1_3:74348509-74348528 Msa0140180:intron 55.0%
GCTGCTTCCTCGGATTCACT+CGG - chr1_3:74348519-74348538 None:intergenic 55.0%
GGGAGATGGAAGGTCGTTGT+TGG + chr1_3:74349118-74349137 Msa0140180:CDS 55.0%
! CTCTCCCTTTTGCTCGACGA+TGG - chr1_3:74350559-74350578 None:intergenic 55.0%
CATCGTCGAGCAAAAGGGAG+AGG + chr1_3:74350557-74350576 Msa0140180:intron 55.0%
ACGGCGGTAGGGAAAGAAAC+AGG - chr1_3:74351871-74351890 None:intergenic 55.0%
GGCTTACATGCATGCAGGAG+AGG - chr1_3:74351907-74351926 None:intergenic 55.0%
! CGTTGACTGGTCCTCACTCT+TGG - chr1_3:74352100-74352119 None:intergenic 55.0%
GAGTGAGGACCAGTCAACGA+AGG + chr1_3:74352101-74352120 Msa0140180:intron 55.0%
AGAGCGACCAAGAGAATCCG+AGG + chr1_3:74353259-74353278 Msa0140180:CDS 55.0%
CCTTCGGTTGCACTTTCAGC+TGG - chr1_3:74353457-74353476 None:intergenic 55.0%
! CCAGCTGAAAGTGCAACCGA+AGG + chr1_3:74353454-74353473 Msa0140180:CDS 55.0%
AGTGCAACCGAAGGAATCCG+AGG + chr1_3:74353463-74353482 Msa0140180:CDS 55.0%
AGAGCGACTGAGAGAATGCG+AGG + chr1_3:74353661-74353680 Msa0140180:CDS 55.0%
GCTGCTTCCTCGGATTCACT+TGG - chr1_3:74348519-74348538 None:intergenic 55.0%
GGGACTAATGTGCTCTGTCG+TGG + chr1_3:74354082-74354101 Msa0140180:CDS 55.0%
!! CTGCAGTTGAAGGGCGTTCG+GGG - chr1_3:74348194-74348213 None:intergenic 60.0%
!! GCTGCAGTTGAAGGGCGTTC+GGG - chr1_3:74348195-74348214 None:intergenic 60.0%
AGAGCTACCGAGGGAATCCC+AGG + chr1_3:74348383-74348402 Msa0140180:CDS 60.0%
GCTGCTTCCTGGGATTCCCT+CGG - chr1_3:74348393-74348412 None:intergenic 60.0%
GGTCTCGATCGAGTTCCGGA+TGG + chr1_3:74349455-74349474 Msa0140180:intron 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 74347905 74355317 74347905 ID=Msa0140180;Name=Msa0140180
chr1_3 mRNA 74347905 74355317 74347905 ID=Msa0140180-mRNA-1;Parent=Msa0140180;Name=Msa0140180-mRNA-1;_AED=0.06;_eAED=0.10;_QI=0|0|0|1|0|0|10|0|1459
chr1_3 exon 74347905 74348064 74347905 ID=Msa0140180-mRNA-1:exon:25885;Parent=Msa0140180-mRNA-1
chr1_3 exon 74348096 74348298 74348096 ID=Msa0140180-mRNA-1:exon:25886;Parent=Msa0140180-mRNA-1
chr1_3 exon 74348312 74348505 74348312 ID=Msa0140180-mRNA-1:exon:25887;Parent=Msa0140180-mRNA-1
chr1_3 exon 74348752 74348920 74348752 ID=Msa0140180-mRNA-1:exon:25888;Parent=Msa0140180-mRNA-1
chr1_3 exon 74348939 74349167 74348939 ID=Msa0140180-mRNA-1:exon:25889;Parent=Msa0140180-mRNA-1
chr1_3 exon 74349201 74349446 74349201 ID=Msa0140180-mRNA-1:exon:25890;Parent=Msa0140180-mRNA-1
chr1_3 exon 74349456 74349679 74349456 ID=Msa0140180-mRNA-1:exon:25891;Parent=Msa0140180-mRNA-1
chr1_3 exon 74349710 74349935 74349710 ID=Msa0140180-mRNA-1:exon:25892;Parent=Msa0140180-mRNA-1
chr1_3 exon 74349957 74350172 74349957 ID=Msa0140180-mRNA-1:exon:25893;Parent=Msa0140180-mRNA-1
chr1_3 exon 74352805 74355317 74352805 ID=Msa0140180-mRNA-1:exon:25894;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74347905 74348064 74347905 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74348096 74348298 74348096 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74348312 74348505 74348312 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74348752 74348920 74348752 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74348939 74349167 74348939 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74349201 74349446 74349201 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74349456 74349679 74349456 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74349710 74349935 74349710 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74349957 74350172 74349957 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
chr1_3 CDS 74352805 74355317 74352805 ID=Msa0140180-mRNA-1:cds;Parent=Msa0140180-mRNA-1
Gene Sequence

>Msa0140180

ATGGATTCTCGTTCACTACCTCCTGATATCAACATAAAACCTGAGCATTGTCCAGAAGCTGTAAGAGAATGGTACCGCTTAACAGGGCTACAAGATCGTAAAGAAAGTGCTGGTAGAAAGAATTTGGCTTTGAAAGCAAAACAACATCTTCTTTCTTTGGTAAGTGGGAATTGCGTTATACTTCTCCTAACAATGGGAAAAACCATATTACTATTAGAAAAGCCTGCGAGAGTTGCATTGAAGAAGGAGGGTGTTCCCCGAACGCCCTTCAACTGCAGCAACAACGTCAATTTCTTCGTCTCCACTACGGTTGAAAAAGAGATTGAGAGAATCCGAGGAAACAGAAAGAACAACAATTTCTTTTCGAAAAAGAGACCGAGAGAATCTGAGGAAACAGCAGCAATATCAATTTATTCGTATCCTTTACAATCGAAAGAGCTACCGAGGGAATCCCAGGAAGCAGCAGCGACATCAATCTATTGGTCTCCATTGCCGTCGAAAGAGAAACCGAGAGAATCCAAGGAGGAAGCAGCAGCAACTACAATTTCTTTGTCTCCTGATAAAAGAGGAAAGGTTTTAAAAACGAGTTTAATGGAGAAGAATTCAGAGGATTGTGGTAGAAGAGGGAAAGTATTAAAGACAAGTATAATGAAGAAAAATTCAGAGGCTTCTGGTAAGAAAGGGAAGGTATCAAAGACGGAAGGTGAAAGAGGAAGGTATTCACTTAATCAAGTTTTGGTTTCAGGGACTAATGTATTCTGTCGTGGTAGTAACAATGTTGTCAAAAGAGGGGGTTTATTTTCTGATGGCATAGTTTGTAATTGTTGTCGTGTTAATTTCAATATCACTGGATTTGAGGCTCATGCTGGTTGTACAAGACATAGACCATCCACTAGTATCTTGTTGGGAGATGGAAGGTCGTTGTTGGACTGTCAAAGGGAAGCACTTAGTTCACCAAATTCTGAAGCAGGGAATCATTGTGTTGCCCAAGTAAATTCTGACGCGGGGAATCATTATGTTGCCGAAGGAAATTTTGAAGTGCAAGTAAATTCTGAAGCAGGGAATCATTCTGTTGCCGAAGGAAATTCTGAAGTAGGGAATCACTGTGTTGCCAAAGCAAATAACGATACTGTTTGTTCTATTTGTGATTTGGGAGGTGACATAGTACTGTGTGATCAATGTCCTTCTGCATTCCACCTCAGTCTCGATCGAGTTCCGGATGGAGATTGGTTCTGTCCAACATGTTGTTGCAAAATATGCTATCGACCCAAATGCAAGCAAGAATGTGTAGATGGCAATGACAGCAATATTCTTGTTTGTGTTCAATGTGCGGAAAAGTTTCATTTTGGGTGTGTAAAGGCGTTAGGACTTGGATCAAGTCACATTGCCAGCAGTGGTGAAAAGAAGAATTGGTTTTGCAGTGTAAAGTTGTTAGGGAAACCAATAACGGTTGCAGCTAATCTAACTTGGACATTATTGAAGAATGTGAGTAATGATGATCAATTTAGTCAAAAGAAGAGAAAGTTGAATGTGGCTCTTGATGTATTGTATGAGAGTTTTAACCCAACTATTGATGCTTTATCTGGAAGAGAATTGATTAAAGATGTTGTTTTTAGTAGAGGCTCAGAACATAAACGCTTGAACTTTCATGAGAAAATGGGTAAAGTCATTTCGGTTGCAACTATAAGAATTTATGGTCAAAAGGTTGCCGAGATAGTTTTCGTGGCTACCAAGGAACAATATCGAAGACAAGGAATGTGTCGTTTGTTGATGCATGAGCTTGAGAAACAGTTGACACGCTTAGGAGTTGAAAGCTTGGTTTTGCATTCCTCCGAGGATGCTATAGACACATGGACAAAAGCGTTTGTGCCTGAGCATTGTCCAGAAGCTGTAAGAGAATGGTGCCGCTTAACAGGACTACAAGATCGTAAAGATAGTGCTGGTAGAAAGGATTTGACTTTGAAAGCAAAACAACATCTTCTTTCTTTGGGTTGGAAGCTTTGGTACATTGACAAAAATGGTAGGAGGGAATTGCGTTATACTTCTCCTAACAATGGGAAAAACCATATTACTCTTAAAAAAGCCTGCGAGAGTTGCATTGAAGAAGGAGGGTGTTCCCTCAAACACCCTTCAACTGCAGCACCAGTAACAGCAGCAACAATAATTTCTCTGTCTCCATCACAGTCGAAAAAGCGACCTAGAGAATCCGAGGAAGCAGTAGCTAGAGCATTTTCTTTTTCTCAACTACAGCTGAAGGAGCGACAGAGAAAATCTGAGGAAACAGCAGCAACATCAATTTATTCGTCCTGTTTACTTTCTAAAGAGCGACCAAGAGAATCCGAGGAAGAAGCGACAACAACATCAATATATTGGTCTCCATTACAGTCGAATGAGCAACTGAGAGAATCCGTGGAAGCAGCAGCAACAACAACAATTTCTTTGTCTCCATTACAGTCGAAAGAGCGACTGAGAGAATCTGAGGAAGCAGCAGCAATATCAATATATTCATCTCCATTCCAGCTGAAAGTGCAACCGAAGGAATCCGAGGTATCAGTAGCAAGAGGATTTTCTCTGTCTCCATTTCAGTCGATTGAGCGACTGAGAGCATCTGGTGAAGCAGCAGCAACAACAATTTCTTCGTCTCCATTACAGTTGAAAGAGAAACCGAGAGAATCTGAGGAAGCAGTAGTAAGAGCATTTTACTTGTCTCCATTACAGTCGAAAGAGCGACTGAGAGAATGCGAGGAAGCAGCAGCAACATTAATTTATTCGTCTCCATCACTGATAAAAGAGCAACGGAGAGAATCTGATGAAGCAGCATCAAAAACAATTTCTCTGTCTCCATTACAGTCGAAAAAGCAACCAAGTGAATCCGAGGAAGCAGCAGCAATAGCAATGTCTTTGAAATCCTTTGAATTGACTTCTAATGAGGATTCTGAAGCCTCTAGTTTCATTTCTGTTAAAAAAGCCACGGTTACTACATTATCAACATCAATGGAAAATGAGAAGCATGTGATTCAATCTAAACCGGAAGTTACTAATTCGGTGGGTAGTGGTAAAAGAGGGATGGTATTAAATAGAGAAGGTATAAGGGAAAGGTATTCACTTGTTTCTTGGTTGATAAAGAATAAAGTTTTGGTTTCAGGGACTAATGTGCTCTGTCGTGGTAGTCACAATGTTGTTACAAGCGGGAGTATATTTTGTGATGGTATTGTTTGTGATTGTTGTAATTTTAATTTCACTCTCGCTGGATTTAAGGATCACGCTGGTTGTACAAGACCTACATCATCCACTAGTATCTTCTTGGAAGATGGAAGGTCGTTGTTGGAATGTCAAAGGGAAGCTATGAGTTCACGTGATCAAAACGATAATCATTGTATTGCCGAAGCAAACTATGAAGCAAATAACGATACTGTTTGTTCTATTTGTGGTTTTGGAGGTGACATAGTACTATGTGATCGATGTCCTTCTGTATTCCACCTCAGTTGTTTAGATCTTGATCGAGTTCCGGATGGTGATTGGTTCTGTCCAACTTGTTGTTGCAAAATATGTTGTCGACCTAAACGTAAACAAGAATGTACAGATACCAATGATAACAATATTCTTGTTTGTGTTCAATGTGAGCAGAAATTTCACTTTGGGTGTGTAAAGGCAACAGGATATAAATCTAGTCACATGGAGAGTAATGTTAAAAAGAAGAATTGGTTTTGCAATATAGTTTGCGCGAACAGGTTCATATGTCTAAAGAAGCTATTGTGGAAACCAGTTAAGGTTGCGGATAATCTAACTTGGACACTGTTGAAGAATGTGAATAGTGATGATGATGGCGGAGATTTTTCTTCTGATGAGTTTAGTCAAAAGAAGCGTAAGTTAAATGTGGCTCTTCATGTATTGTATGAGAGTTTTTATCCAACAATTGATGCTTTAACTGGAAGAGAGTTGATTAGAGACATTGTTTTTAGTAGAGACTCAGTACATAAGCGCTTGAACTTTTGTGGTTTCTATAATGTGATTTTGGAGAAAATGGAGGAAGTGATTTCGGTGGCTACCATAAGGATTTATGGTCACAAGGTTGCTGAGATAGTTTTCGTGGCCACCAATAAAGAACATCGAGGACAAGGAATGCGTCGTTTGTTGATGGATGAACTTGAGAAACAATTGACTCGCTTTGGAGTAGAAAGCATGGTTTTGCATTCATCCGAGGATGCTATAGACACATGGACAAAATCTTTTGGTTTTGAGAGGATGACAGGTACTGACAAGCGTCAATTTGTTGATATTACTTTCTTAGAATTTCAGGACACTGTCATGTGCCTTAAACCACTGAAGAAACCTAAATGGCCTTTGATAAGATTCAATTTAGTATTAGGACTGAAATAG
Protein sequence

>Msa0140180

MDSRSLPPDINIKPEHCPEAVREWYRLTGLQDRKESAGRKNLALKAKQHLLSLVSGNCVILLLTMGKTILLLEKPARVALKKEGVPRTPFNCSNNVNFFVSTTVEKEIERIRGNRKNNNFFSKKRPRESEETAAISIYSYPLQSKELPRESQEAAATSIYWSPLPSKEKPRESKEEAAATTISLSPDKRGKVLKTSLMEKNSEDCGRRGKVLKTSIMKKNSEASGKKGKVSKTEGERGRYSLNQVLVSGTNVFCRGSNNVVKRGGLFSDGIVCNCCRVNFNITGFEAHAGCTRHRPSTSILLGDGRSLLDCQREALSSPNSEAGNHCVAQVNSDAGNHYVAEGNFEVQVNSEAGNHSVAEGNSEVGNHCVAKANNDTVCSICDLGGDIVLCDQCPSAFHLSLDRVPDGDWFCPTCCCKICYRPKCKQECVDGNDSNILVCVQCAEKFHFGCVKALGLGSSHIASSGEKKNWFCSVKLLGKPITVAANLTWTLLKNVSNDDQFSQKKRKLNVALDVLYESFNPTIDALSGRELIKDVVFSRGSEHKRLNFHEKMGKVISVATIRIYGQKVAEIVFVATKEQYRRQGMCRLLMHELEKQLTRLGVESLVLHSSEDAIDTWTKAFVPEHCPEAVREWCRLTGLQDRKDSAGRKDLTLKAKQHLLSLGWKLWYIDKNGRRELRYTSPNNGKNHITLKKACESCIEEGGCSLKHPSTAAPVTAATIISLSPSQSKKRPRESEEAVARAFSFSQLQLKERQRKSEETAATSIYSSCLLSKERPRESEEEATTTSIYWSPLQSNEQLRESVEAAATTTISLSPLQSKERLRESEEAAAISIYSSPFQLKVQPKESEVSVARGFSLSPFQSIERLRASGEAAATTISSSPLQLKEKPRESEEAVVRAFYLSPLQSKERLRECEEAAATLIYSSPSLIKEQRRESDEAASKTISLSPLQSKKQPSESEEAAAIAMSLKSFELTSNEDSEASSFISVKKATVTTLSTSMENEKHVIQSKPEVTNSVGSGKRGMVLNREGIRERYSLVSWLIKNKVLVSGTNVLCRGSHNVVTSGSIFCDGIVCDCCNFNFTLAGFKDHAGCTRPTSSTSIFLEDGRSLLECQREAMSSRDQNDNHCIAEANYEANNDTVCSICGFGGDIVLCDRCPSVFHLSCLDLDRVPDGDWFCPTCCCKICCRPKRKQECTDTNDNNILVCVQCEQKFHFGCVKATGYKSSHMESNVKKKNWFCNIVCANRFICLKKLLWKPVKVADNLTWTLLKNVNSDDDGGDFSSDEFSQKKRKLNVALHVLYESFYPTIDALTGRELIRDIVFSRDSVHKRLNFCGFYNVILEKMEEVISVATIRIYGHKVAEIVFVATNKEHRGQGMRRLLMDELEKQLTRFGVESMVLHSSEDAIDTWTKSFGFERMTGTDKRQFVDITFLEFQDTVMCLKPLKKPKWPLIRFNLVLGLK*