AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0141280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141280 MtrunA17_Chr4g0049201 72.222 144 27 1 10 140 108 251 1.21e-68 213
Msa0141280 MtrunA17_Chr4g0049181 68.456 149 34 1 5 140 296 444 8.17e-65 208
Msa0141280 MtrunA17_Chr4g0049161 73.333 120 19 1 34 140 4 123 2.88e-56 178
Msa0141280 MtrunA17_Chr5g0423761 45.455 110 45 2 39 133 97 206 3.50e-20 85.1
Msa0141280 MtrunA17_Chr3g0144551 43.299 97 41 1 48 130 124 220 4.25e-19 82.4
Msa0141280 MtrunA17_Chr4g0069251 43.299 97 41 1 48 130 169 265 3.34e-18 80.1
Msa0141280 MtrunA17_Chr2g0302631 43.299 97 41 1 48 130 174 270 1.36e-17 78.2
Msa0141280 MtrunA17_Chr1g0194101 39.216 102 49 1 46 134 57 158 2.05e-17 77.4
Msa0141280 MtrunA17_Chr4g0049211 44.565 92 36 2 54 130 9 100 2.16e-17 76.6
Msa0141280 MtrunA17_Chr1g0154371 41.667 96 42 1 48 129 347 442 2.51e-17 77.4
Msa0141280 MtrunA17_Chr7g0271451 40.206 97 44 1 48 130 185 281 6.24e-17 76.3
Msa0141280 MtrunA17_Chr3g0096351 40.206 97 44 1 48 130 171 267 7.60e-17 76.3
Msa0141280 MtrunA17_Chr5g0402071 40.206 97 44 1 48 130 157 253 1.22e-16 75.5
Msa0141280 MtrunA17_Chr8g0348451 39.175 97 45 1 48 130 134 230 7.18e-16 73.2
Msa0141280 MtrunA17_Chr1g0181291 39.394 99 44 1 48 130 502 600 9.19e-16 73.2
Msa0141280 MtrunA17_Chr7g0248491 39.175 97 45 1 48 130 151 247 9.61e-16 72.8
Msa0141280 MtrunA17_Chr5g0443121 36.792 106 53 1 48 139 173 278 1.03e-15 72.8
Msa0141280 MtrunA17_Chr4g0023221 37.500 104 51 1 48 137 721 824 1.27e-15 72.8
Msa0141280 MtrunA17_Chr7g0236571 36.190 105 52 2 48 137 330 434 1.98e-15 72.0
Msa0141280 MtrunA17_Chr7g0236651 34.783 115 60 2 48 147 476 590 5.00e-15 70.9
Msa0141280 MtrunA17_Chr7g0265391 30.657 137 75 2 14 130 296 432 7.13e-15 70.5
Msa0141280 MtrunA17_Chr7g0249841 35.000 120 64 2 30 135 274 393 7.52e-15 70.5
Msa0141280 MtrunA17_Chr8g0377951 36.275 102 49 1 44 129 555 656 8.73e-15 70.5
Msa0141280 MtrunA17_Chr4g0034931 39.175 97 45 1 48 130 130 226 1.02e-14 70.1
Msa0141280 MtrunA17_Chr2g0312561 38.947 95 44 1 49 129 34 128 1.74e-14 69.3
Msa0141280 MtrunA17_Chr2g0280771 35.714 112 57 2 51 147 476 587 2.05e-14 69.3
Msa0141280 MtrunA17_Chr1g0206361 37.778 90 42 1 54 129 340 429 2.18e-14 69.3
Msa0141280 MtrunA17_Chr1g0206521 37.864 103 49 2 48 135 326 428 2.39e-14 68.9
Msa0141280 MtrunA17_Chr1g0206521 37.864 103 49 2 48 135 968 1070 2.39e-14 68.9
Msa0141280 MtrunA17_Chr2g0283111 39.130 92 42 1 48 125 601 692 3.07e-14 68.9
Msa0141280 MtrunA17_Chr4g0042341 35.417 96 48 1 48 129 514 609 3.61e-14 68.6
Msa0141280 MtrunA17_Chr8g0392271 35.088 114 58 2 46 143 566 679 5.31e-14 68.2
Msa0141280 MtrunA17_Chr2g0317071 36.082 97 48 1 48 130 784 880 5.60e-14 68.2
Msa0141280 MtrunA17_Chr7g0236511 31.304 115 64 2 48 147 492 606 5.75e-14 67.8
Msa0141280 MtrunA17_Chr3g0121971 36.634 101 48 1 45 129 572 672 6.64e-14 67.8
Msa0141280 MtrunA17_Chr7g0236691 32.743 113 61 2 50 147 493 605 7.71e-14 67.8
Msa0141280 MtrunA17_Chr8g0337671 33.333 120 66 2 30 135 278 397 7.85e-14 67.4
Msa0141280 MtrunA17_Chr7g0236341 33.043 115 62 2 48 147 509 623 8.10e-14 67.4
Msa0141280 MtrunA17_Chr2g0312571 38.542 96 45 1 48 129 36 131 9.15e-14 67.4
Msa0141280 MtrunA17_Chr1g0154331 33.621 116 61 2 28 129 12 125 9.69e-14 67.0
Msa0141280 MtrunA17_Chr1g0209501 34.615 104 53 2 50 140 303 404 1.06e-13 67.0
Msa0141280 MtrunA17_Chr7g0236561 31.304 115 64 2 48 147 496 610 1.19e-13 67.0
Msa0141280 MtrunA17_Chr5g0434141 32.407 108 57 1 38 129 572 679 1.31e-13 67.0
Msa0141280 MtrunA17_Chr7g0236531 30.435 115 65 2 48 147 29 143 1.31e-13 66.6
Msa0141280 MtrunA17_Chr4g0058561 35.922 103 52 1 49 137 347 449 1.89e-13 66.6
Msa0141280 MtrunA17_Chr2g0280701 36.458 96 47 1 48 129 491 586 1.91e-13 66.6
Msa0141280 MtrunA17_Chr3g0108351 34.615 130 64 4 30 140 593 720 1.94e-13 66.6
Msa0141280 MtrunA17_Chr8g0364671 31.193 109 61 1 43 137 48 156 2.11e-13 65.9
Msa0141280 MtrunA17_Chr8g0375511 32.500 120 64 2 28 130 807 926 2.11e-13 66.2
Msa0141280 MtrunA17_Chr3g0129391 33.043 115 63 1 40 140 857 971 2.31e-13 66.2
Msa0141280 MtrunA17_Chr5g0432871 33.846 130 65 4 30 140 589 716 2.35e-13 66.2
Msa0141280 MtrunA17_Chr7g0274261 33.628 113 61 1 32 130 501 613 2.47e-13 66.2
Msa0141280 MtrunA17_Chr2g0280831 30.597 134 71 4 26 137 57 190 2.57e-13 65.9
Msa0141280 MtrunA17_Chr1g0206461 37.624 101 48 2 48 133 324 424 2.64e-13 65.9
Msa0141280 MtrunA17_Chr5g0437101 34.314 102 48 1 48 130 485 586 2.86e-13 65.9
Msa0141280 MtrunA17_Chr7g0267441 36.190 105 51 1 46 134 584 688 3.08e-13 65.9
Msa0141280 MtrunA17_Chr4g0069241 33.333 102 55 1 45 133 55 156 3.25e-13 65.5
Msa0141280 MtrunA17_Chr2g0323941 34.737 95 47 1 51 130 484 578 3.29e-13 65.9
Msa0141280 MtrunA17_Chr3g0104881 37.143 105 45 2 45 130 483 585 3.40e-13 65.9
Msa0141280 MtrunA17_Chr4g0042361 34.375 96 49 1 48 129 530 625 3.59e-13 65.9
Msa0141280 MtrunA17_Chr2g0289161 33.019 106 54 2 42 130 403 508 3.62e-13 65.5
Msa0141280 MtrunA17_Chr8g0361281 38.889 90 41 1 54 129 510 599 3.65e-13 65.5
Msa0141280 MtrunA17_Chr1g0183041 32.673 101 53 1 45 130 338 438 3.71e-13 65.5
Msa0141280 MtrunA17_Chr8g0354281 37.895 95 45 1 45 125 323 417 3.78e-13 65.5
Msa0141280 MtrunA17_Chr8g0354421 36.458 96 47 1 45 126 351 446 3.88e-13 65.5
Msa0141280 MtrunA17_Chr5g0428581 36.458 96 47 1 48 129 35 130 3.97e-13 65.5
Msa0141280 MtrunA17_Chr1g0203631 36.458 96 47 1 48 129 983 1078 3.98e-13 65.5
Msa0141280 MtrunA17_Chr3g0119041 34.188 117 63 1 27 129 310 426 4.13e-13 65.5
Msa0141280 MtrunA17_Chr1g0206551 34.409 93 47 1 51 129 29 121 4.17e-13 65.1
Msa0141280 MtrunA17_Chr7g0236471 32.174 115 63 2 48 147 331 445 4.86e-13 65.1
Msa0141280 MtrunA17_Chr3g0079661 36.170 94 46 1 51 130 909 1002 5.05e-13 65.5
Msa0141280 MtrunA17_Chr7g0236551 29.565 115 66 2 48 147 479 593 5.35e-13 65.1
Msa0141280 MtrunA17_Chr1g0206561 34.375 96 49 1 48 129 320 415 5.51e-13 65.1
Msa0141280 MtrunA17_Chr2g0284041 33.036 112 61 3 37 134 397 508 5.61e-13 65.1
Msa0141280 MtrunA17_Chr3g0113601 35.294 102 47 1 48 130 464 565 6.16e-13 65.1
Msa0141280 MtrunA17_Chr2g0291501 37.500 96 46 1 48 129 629 724 6.36e-13 65.1
Msa0141280 MtrunA17_Chr7g0252321 35.644 101 54 1 41 130 61 161 6.41e-13 64.7
Msa0141280 MtrunA17_Chr2g0321921 35.185 108 54 1 38 129 585 692 7.63e-13 64.7
Msa0141280 MtrunA17_Chr3g0093161 34.615 104 53 2 49 137 489 592 7.87e-13 64.7
Msa0141280 MtrunA17_Chr2g0281971 34.906 106 55 1 49 140 40 145 8.52e-13 64.3
Msa0141280 MtrunA17_Chr3g0108361 31.034 145 80 4 14 140 580 722 8.57e-13 64.7
Msa0141280 MtrunA17_Chr1g0206331 37.778 90 42 1 54 129 332 421 1.02e-12 64.3
Msa0141280 MtrunA17_Chr6g0484071 35.106 94 46 2 50 130 53 144 1.17e-12 63.9
Msa0141280 MtrunA17_Chr5g0394021 38.043 92 43 1 48 125 314 405 1.18e-12 64.3
Msa0141280 MtrunA17_Chr4g0025601 37.143 105 50 1 46 134 619 723 1.35e-12 63.9
Msa0141280 MtrunA17_Chr6g0483811 35.417 96 47 2 48 130 51 144 1.45e-12 63.5
Msa0141280 MtrunA17_Chr1g0154351 36.559 93 45 1 51 129 352 444 1.68e-12 63.5
Msa0141280 MtrunA17_Chr1g0159711 34.146 123 65 2 33 139 327 449 1.86e-12 63.5
Msa0141280 MtrunA17_Chr8g0354331 36.667 90 43 1 51 126 94 183 1.87e-12 63.5
Msa0141280 MtrunA17_Chr1g0206451 35.238 105 53 2 48 137 363 467 1.93e-12 63.5
Msa0141280 MtrunA17_Chr7g0221711 31.707 123 69 2 21 129 586 707 2.14e-12 63.5
Msa0141280 MtrunA17_Chr2g0281241 29.825 114 65 2 40 138 47 160 2.20e-12 62.8
Msa0141280 MtrunA17_Chr2g0333181 36.082 97 48 1 48 130 30 126 2.35e-12 63.2
Msa0141280 MtrunA17_Chr4g0071371 33.929 112 59 1 41 137 119 230 2.47e-12 63.2
Msa0141280 MtrunA17_Chr4g0022431 35.354 99 48 1 48 130 543 641 2.59e-12 63.2
Msa0141280 MtrunA17_Chr2g0280801 34.286 105 54 2 48 137 518 622 2.88e-12 63.2
Msa0141280 MtrunA17_Chr8g0358781 32.381 105 57 1 39 129 326 430 3.21e-12 62.8
Msa0141280 MtrunA17_Chr1g0154311 35.484 93 46 1 51 129 345 437 3.62e-12 62.8
Msa0141280 MtrunA17_Chr1g0205771 35.345 116 58 3 28 129 317 429 3.69e-12 62.8
Msa0141280 MtrunA17_Chr8g0340091 30.435 115 65 2 48 147 522 636 4.15e-12 62.8
Msa0141280 MtrunA17_Chr5g0400681 36.449 107 51 2 41 130 674 780 4.35e-12 62.8
Msa0141280 MtrunA17_Chr6g0483791 35.417 96 47 2 48 130 362 455 4.48e-12 62.4
Msa0141280 MtrunA17_Chr5g0403891 35.000 100 51 1 45 130 243 342 4.49e-12 62.4
Msa0141280 MtrunA17_Chr8g0345561 31.452 124 68 4 23 130 773 895 4.51e-12 62.4
Msa0141280 MtrunA17_Chr8g0354441 36.458 96 47 1 45 126 338 433 4.93e-12 62.4
Msa0141280 MtrunA17_Chr2g0280791 32.759 116 62 3 37 137 502 616 5.12e-12 62.4
Msa0141280 MtrunA17_Chr8g0354351 36.842 95 46 1 46 126 322 416 5.20e-12 62.4
Msa0141280 MtrunA17_Chr4g0066761 33.019 106 56 1 45 135 59 164 5.26e-12 62.0
Msa0141280 MtrunA17_Chr8g0358911 35.789 95 47 1 49 129 37 131 5.96e-12 62.0
Msa0141280 MtrunA17_Chr2g0299041 33.333 105 55 1 41 130 97 201 6.16e-12 62.0
Msa0141280 MtrunA17_Chr7g0236231 31.304 115 64 2 48 147 509 623 6.40e-12 62.0
Msa0141280 MtrunA17_Chr5g0439591 40.196 102 48 3 49 139 62 161 6.52e-12 62.0
Msa0141280 MtrunA17_Chr8g0369211 33.684 95 49 1 49 129 620 714 6.56e-12 62.0
Msa0141280 MtrunA17_Chr2g0318171 32.258 124 66 3 22 129 444 565 6.60e-12 62.0
Msa0141280 MtrunA17_Chr5g0422921 34.343 99 50 2 54 137 495 593 6.63e-12 62.0
Msa0141280 MtrunA17_Chr8g0361431 29.365 126 61 3 40 137 454 579 7.01e-12 62.0
Msa0141280 MtrunA17_Chr7g0248881 34.375 96 49 1 49 130 346 441 7.55e-12 62.0
Msa0141280 MtrunA17_Chr2g0323231 33.333 96 50 1 48 129 169 264 7.71e-12 61.6
Msa0141280 MtrunA17_Chr1g0154321 36.559 93 45 1 51 129 362 454 7.83e-12 62.0
Msa0141280 MtrunA17_Chr1g0206211 34.951 103 52 2 50 137 20 122 7.95e-12 60.1
Msa0141280 MtrunA17_Chr2g0280781 36.458 96 47 1 48 129 501 596 8.20e-12 61.6
Msa0141280 MtrunA17_Chr6g0483981 34.737 95 47 2 49 130 261 353 8.32e-12 61.6
Msa0141280 MtrunA17_Chr1g0165521 36.082 97 48 1 48 130 452 548 8.63e-12 61.6
Msa0141280 MtrunA17_Chr2g0314991 34.653 101 52 1 43 129 1162 1262 8.98e-12 61.6
Msa0141280 MtrunA17_Chr7g0245221 32.143 112 61 2 32 129 596 706 9.45e-12 61.6
Msa0141280 MtrunA17_Chr1g0213501 29.752 121 68 2 25 130 81 199 9.81e-12 61.2
Msa0141280 MtrunA17_Chr7g0236641 33.333 105 55 2 48 137 516 620 9.88e-12 61.6
Msa0141280 MtrunA17_Chr2g0327511 34.259 108 56 2 40 132 90 197 1.07e-11 61.2
Msa0141280 MtrunA17_Chr4g0054521 35.417 96 46 1 51 130 682 777 1.11e-11 61.2
Msa0141280 MtrunA17_Chr5g0439601 37.168 113 50 4 46 139 293 403 1.12e-11 61.2
Msa0141280 MtrunA17_Chr8g0354431 35.789 95 47 1 46 126 331 425 1.14e-11 61.2
Msa0141280 MtrunA17_Chr3g0123141 32.692 104 54 2 46 135 598 699 1.14e-11 61.2
Msa0141280 MtrunA17_Chr4g0042441 35.165 91 44 1 54 129 496 586 1.18e-11 61.2
Msa0141280 MtrunA17_Chr7g0248904 34.375 96 49 1 49 130 353 448 1.19e-11 61.2
Msa0141280 MtrunA17_Chr4g0003191 36.264 91 43 2 48 137 28 104 1.21e-11 57.8
Msa0141280 MtrunA17_Chr8g0357671 35.556 90 44 1 54 129 41 130 1.22e-11 59.3
Msa0141280 MtrunA17_Chr5g0426941 35.556 90 44 1 54 129 336 425 1.25e-11 61.2
Msa0141280 MtrunA17_Chr1g0206531 35.644 101 50 2 48 133 328 428 1.27e-11 61.2
Msa0141280 MtrunA17_Chr2g0280681 37.778 90 42 1 54 129 498 587 1.27e-11 61.2
Msa0141280 MtrunA17_Chr5g0420171 34.259 108 60 2 23 130 489 585 1.28e-11 61.2
Msa0141280 MtrunA17_Chr8g0354271 35.417 96 48 1 45 126 323 418 1.40e-11 61.2
Msa0141280 MtrunA17_Chr2g0281501 30.894 123 66 3 27 130 401 523 1.44e-11 61.2
Msa0141280 MtrunA17_Chr8g0360591 34.737 95 48 1 49 129 35 129 1.48e-11 60.8
Msa0141280 MtrunA17_Chr8g0391231 35.455 110 53 4 50 144 329 435 1.59e-11 60.8
Msa0141280 MtrunA17_Chr2g0280731 30.328 122 67 3 30 133 520 641 1.73e-11 60.8
Msa0141280 MtrunA17_Chr3g0125281 35.043 117 60 2 33 133 380 496 1.99e-11 60.5
Msa0141280 MtrunA17_Chr2g0314961 33.663 101 53 1 43 129 141 241 2.03e-11 60.5
Msa0141280 MtrunA17_Chr6g0483851 33.010 103 54 2 48 137 403 503 2.05e-11 60.5
Msa0141280 MtrunA17_Chr1g0200911 35.052 97 48 1 48 129 294 390 2.05e-11 60.5
Msa0141280 MtrunA17_Chr8g0340111 31.250 144 80 4 20 147 469 609 2.13e-11 60.5
Msa0141280 MtrunA17_Chr2g0293071 28.696 115 65 2 43 140 46 160 2.13e-11 60.5
Msa0141280 MtrunA17_Chr8g0376131 30.000 110 63 1 34 129 28 137 2.21e-11 60.5
Msa0141280 MtrunA17_Chr1g0206401 35.870 92 45 1 48 125 341 432 2.33e-11 60.5
Msa0141280 MtrunA17_Chr2g0315081 34.653 101 52 1 43 129 639 739 2.37e-11 60.5
Msa0141280 MtrunA17_Chr8g0354311 34.375 96 49 1 45 126 26 121 2.38e-11 57.8
Msa0141280 MtrunA17_Chr7g0219651 27.559 127 78 1 18 130 1480 1606 2.45e-11 60.5
Msa0141280 MtrunA17_Chr1g0201611 34.343 99 51 1 46 130 75 173 2.50e-11 60.1
Msa0141280 MtrunA17_Chr2g0318831 31.579 114 58 2 30 129 481 588 2.58e-11 60.5
Msa0141280 MtrunA17_Chr7g0262521 32.673 101 53 1 45 130 333 433 2.62e-11 60.5
Msa0141280 MtrunA17_Chr1g0190581 35.052 97 49 1 48 130 512 608 2.65e-11 60.5
Msa0141280 MtrunA17_Chr5g0428571 34.375 96 49 1 48 129 289 384 2.66e-11 60.1
Msa0141280 MtrunA17_Chr5g0428101 33.333 99 51 2 54 137 498 596 2.68e-11 60.5
Msa0141280 MtrunA17_Chr5g0394001 36.170 94 46 1 54 133 326 419 2.68e-11 60.1
Msa0141280 MtrunA17_Chr5g0413981 29.464 112 62 1 43 137 48 159 2.69e-11 60.1
Msa0141280 MtrunA17_Chr3g0130431 32.500 120 65 2 32 135 317 436 3.00e-11 60.1
Msa0141280 MtrunA17_Chr8g0361611 36.082 97 48 1 48 130 439 535 3.07e-11 60.1
Msa0141280 MtrunA17_Chr8g0373501 33.000 100 53 1 45 130 324 423 3.16e-11 60.1
Msa0141280 MtrunA17_Chr2g0318191 35.714 98 48 2 49 133 8 103 3.68e-11 58.5
Msa0141280 MtrunA17_Chr6g0484021 32.039 103 55 2 48 137 299 399 4.08e-11 59.7
Msa0141280 MtrunA17_Chr8g0357831 37.778 90 42 1 54 129 189 278 4.08e-11 59.7
Msa0141280 MtrunA17_Chr5g0428111 34.343 99 50 2 54 137 500 598 4.09e-11 59.7
Msa0141280 MtrunA17_Chr6g0475131 34.444 90 45 1 54 129 6 95 4.22e-11 59.3
Msa0141280 MtrunA17_Chr1g0158441 32.979 94 48 2 49 129 22 113 4.25e-11 59.3
Msa0141280 MtrunA17_Chr2g0277731 33.036 112 50 5 43 129 287 398 4.33e-11 59.7
Msa0141280 MtrunA17_Chr3g0102451 36.458 96 47 1 49 130 315 410 4.72e-11 59.7
Msa0141280 MtrunA17_Chr1g0161701 29.412 119 68 1 39 141 559 677 4.80e-11 59.7
Msa0141280 MtrunA17_Chr3g0125451 29.457 129 69 3 29 143 399 519 4.91e-11 59.7
Msa0141280 MtrunA17_Chr8g0358821 29.508 122 72 1 22 129 654 775 4.94e-11 59.7
Msa0141280 MtrunA17_Chr2g0327471 34.579 107 55 2 41 132 74 180 5.05e-11 59.3
Msa0141280 MtrunA17_Chr7g0236121 31.858 113 62 2 50 147 497 609 5.72e-11 59.3
Msa0141280 MtrunA17_Chr8g0365311 37.778 90 42 1 54 129 92 181 5.81e-11 58.5
Msa0141280 MtrunA17_Chr6g0483821 32.039 103 55 2 48 137 352 452 5.90e-11 59.3
Msa0141280 MtrunA17_Chr4g0042421 35.556 90 44 1 54 129 501 590 6.08e-11 59.3
Msa0141280 MtrunA17_Chr7g0236201 31.858 113 62 2 50 147 463 575 6.41e-11 59.3
Msa0141280 MtrunA17_Chr7g0239361 34.021 97 49 1 49 130 348 444 6.48e-11 59.3
Msa0141280 MtrunA17_Chr7g0236161 31.858 113 62 2 50 147 463 575 6.50e-11 59.3
Msa0141280 MtrunA17_Chr7g0251771 35.714 98 48 2 50 132 43 140 6.53e-11 58.9
Msa0141280 MtrunA17_Chr4g0063701 38.542 96 42 2 49 129 521 614 6.75e-11 59.3
Msa0141280 MtrunA17_Chr4g0055011 32.292 96 51 1 48 129 62 157 6.94e-11 58.9
Msa0141280 MtrunA17_Chr1g0175451 34.375 96 49 1 48 129 318 413 7.16e-11 58.9
Msa0141280 MtrunA17_Chr1g0202201 32.203 118 63 2 30 130 313 430 7.37e-11 58.9
Msa0141280 MtrunA17_Chr5g0443691 35.185 108 53 3 42 132 82 189 8.19e-11 58.5
Msa0141280 MtrunA17_Chr2g0314911 32.673 101 54 1 43 129 647 747 8.29e-11 58.9
Msa0141280 MtrunA17_Chr1g0202331 36.585 82 38 1 64 131 538 619 8.73e-11 58.9
Msa0141280 MtrunA17_Chr4g0073471 32.632 95 49 1 50 129 287 381 8.80e-11 58.9
Msa0141280 MtrunA17_Chr6g0451071 34.021 97 51 1 46 129 55 151 9.10e-11 58.5
Msa0141280 MtrunA17_Chr1g0148501 31.008 129 60 3 30 144 409 522 9.28e-11 58.5
Msa0141280 MtrunA17_Chr1g0209411 34.831 89 41 2 64 135 300 388 9.63e-11 58.5
Msa0141280 MtrunA17_Chr4g0065521 33.028 109 58 2 54 147 34 142 9.80e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141280 AT1G09440.1 42.268 97 42 1 48 130 147 243 6.09e-18 79.7
Msa0141280 AT1G09440.2 42.268 97 42 1 48 130 147 243 6.09e-18 79.7
Msa0141280 AT3G59110.1 42.268 97 42 1 48 130 180 276 4.72e-17 77.0
Msa0141280 AT1G56720.3 40.206 97 44 1 48 130 169 265 1.16e-16 75.9
Msa0141280 AT1G56720.1 40.206 97 44 1 48 130 169 265 1.16e-16 75.9
Msa0141280 AT1G56720.2 40.206 97 44 1 48 130 169 265 1.16e-16 75.9
Msa0141280 AT1G56720.4 40.206 97 44 1 48 130 169 265 1.16e-16 75.9
Msa0141280 AT3G17420.1 41.237 97 43 1 48 130 144 240 1.44e-16 75.9
Msa0141280 AT5G48380.1 34.783 115 62 1 37 138 282 396 1.98e-16 75.5
Msa0141280 AT5G18500.2 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT5G18500.5 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT5G18500.4 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT5G18500.1 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT5G18500.3 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT5G18500.6 40.625 96 43 1 48 129 156 251 2.57e-16 75.1
Msa0141280 AT4G02630.1 38.144 97 46 1 48 130 152 248 6.87e-16 73.9
Msa0141280 AT3G26700.4 36.134 119 64 2 30 136 50 168 1.70e-15 72.0
Msa0141280 AT3G26700.5 36.134 119 64 2 30 136 50 168 1.70e-15 72.0
Msa0141280 AT3G26700.3 36.134 119 64 2 30 136 50 168 2.09e-15 72.0
Msa0141280 AT3G26700.2 36.134 119 64 2 30 136 50 168 2.09e-15 72.0
Msa0141280 AT3G26700.1 36.134 119 64 2 30 136 50 168 2.09e-15 72.0
Msa0141280 AT2G02220.1 32.000 125 71 1 33 143 709 833 5.25e-15 71.2
Msa0141280 AT2G01820.1 35.088 114 58 1 38 135 565 678 5.97e-15 71.2
Msa0141280 AT4G01330.2 38.144 97 46 1 48 130 152 248 8.19e-15 70.9
Msa0141280 AT4G01330.1 38.144 97 46 1 48 130 152 248 8.35e-15 70.5
Msa0141280 AT4G01330.3 38.144 97 46 1 48 130 152 248 9.00e-15 70.5
Msa0141280 AT2G30940.3 37.634 93 46 1 50 130 158 250 9.90e-15 70.5
Msa0141280 AT2G42960.3 40.206 97 44 1 48 130 173 269 1.07e-14 70.5
Msa0141280 AT2G42960.5 40.206 97 44 1 48 130 173 269 1.07e-14 70.5
Msa0141280 AT2G42960.4 40.206 97 44 1 48 130 173 269 1.07e-14 70.5
Msa0141280 AT2G42960.1 40.206 97 44 1 48 130 173 269 1.07e-14 70.5
Msa0141280 AT1G01540.2 37.113 97 47 1 48 130 144 240 1.19e-14 70.1
Msa0141280 AT2G42960.2 40.206 97 44 1 48 130 173 269 1.19e-14 70.1
Msa0141280 AT4G22130.2 33.333 108 56 1 48 139 244 351 1.50e-14 70.1
Msa0141280 AT4G22130.1 33.333 108 56 1 48 139 385 492 1.56e-14 70.1
Msa0141280 AT1G01540.1 35.849 106 54 1 48 139 144 249 1.65e-14 69.7
Msa0141280 AT1G11330.1 33.913 115 61 2 48 147 512 626 2.66e-14 69.3
Msa0141280 AT1G11330.2 33.913 115 61 2 48 147 514 628 2.66e-14 69.3
Msa0141280 AT1G11330.3 33.913 115 61 2 48 147 514 628 3.06e-14 69.3
Msa0141280 AT3G23750.1 35.780 109 54 1 37 129 557 665 3.17e-14 68.9
Msa0141280 AT5G53890.1 35.052 97 49 1 48 130 744 840 4.28e-14 68.9
Msa0141280 AT2G30940.2 36.458 96 46 1 50 130 158 253 5.45e-14 68.2
Msa0141280 AT2G30940.1 36.458 96 46 1 50 130 158 253 5.66e-14 68.2
Msa0141280 AT1G66150.1 34.259 108 55 1 38 129 568 675 5.77e-14 68.6
Msa0141280 AT2G47060.5 36.634 101 51 1 46 133 61 161 6.39e-14 67.8
Msa0141280 AT3G17410.2 36.000 100 51 1 44 130 55 154 6.55e-14 67.8
Msa0141280 AT3G17410.1 36.000 100 51 1 44 130 55 154 6.55e-14 67.8
Msa0141280 AT2G47060.4 36.735 98 49 1 46 130 61 158 7.36e-14 67.8
Msa0141280 AT2G47060.2 36.735 98 49 1 46 130 61 158 7.76e-14 67.8
Msa0141280 AT2G47060.1 36.735 98 49 1 46 130 61 158 7.76e-14 67.8
Msa0141280 AT4G21410.2 33.673 98 51 1 46 129 345 442 1.03e-13 67.4
Msa0141280 AT4G21410.1 33.673 98 51 1 46 129 220 317 1.39e-13 67.0
Msa0141280 AT1G24030.5 31.532 111 58 2 41 133 44 154 1.48e-13 66.2
Msa0141280 AT3G13380.1 38.298 94 44 1 51 130 851 944 1.50e-13 67.4
Msa0141280 AT1G16670.1 37.234 94 45 1 50 129 33 126 1.51e-13 67.0
Msa0141280 AT4G21400.3 36.000 100 50 1 48 133 339 438 1.73e-13 67.0
Msa0141280 AT4G21410.3 33.673 98 51 1 46 129 345 442 1.82e-13 67.0
Msa0141280 AT1G24650.1 35.780 109 54 1 46 138 535 643 1.83e-13 67.0
Msa0141280 AT5G63940.1 34.146 123 65 2 33 139 334 456 1.83e-13 67.0
Msa0141280 AT1G24030.4 31.532 111 58 2 41 133 44 154 2.10e-13 65.9
Msa0141280 AT1G24030.2 31.532 111 58 2 41 133 44 154 2.12e-13 66.2
Msa0141280 AT1G24030.1 31.532 111 58 2 41 133 58 168 2.24e-13 66.2
Msa0141280 AT2G39180.1 37.607 117 54 2 43 140 504 620 2.40e-13 66.6
Msa0141280 AT4G03390.2 36.364 99 47 1 48 130 475 573 2.59e-13 66.6
Msa0141280 AT4G03390.1 36.364 99 47 1 48 130 475 573 2.59e-13 66.6
Msa0141280 AT2G24230.1 33.636 110 59 1 37 132 525 634 2.60e-13 66.6
Msa0141280 AT4G11900.1 37.500 96 46 1 48 129 527 622 3.18e-13 66.2
Msa0141280 AT4G21400.1 35.294 102 52 1 46 133 349 450 3.61e-13 65.9
Msa0141280 AT1G79620.3 36.842 95 46 1 49 129 629 723 3.78e-13 65.9
Msa0141280 AT1G16110.1 32.877 146 77 4 7 135 381 522 3.79e-13 65.9
Msa0141280 AT4G11900.9 37.500 96 46 1 48 129 458 553 3.82e-13 65.9
Msa0141280 AT1G79620.2 36.842 95 46 1 49 129 629 723 3.83e-13 65.9
Msa0141280 AT4G11900.6 37.500 96 46 1 48 129 527 622 3.84e-13 65.9
Msa0141280 AT4G11900.4 37.500 96 46 1 48 129 527 622 3.84e-13 65.9
Msa0141280 AT4G21400.2 35.294 102 52 1 46 133 337 438 3.89e-13 65.9
Msa0141280 AT1G79620.1 36.842 95 46 1 49 129 629 723 3.91e-13 65.9
Msa0141280 AT1G67720.1 34.259 108 55 2 37 130 587 692 4.05e-13 65.9
Msa0141280 AT4G11900.2 37.500 96 46 1 48 129 527 622 4.07e-13 65.9
Msa0141280 AT4G11900.3 37.500 96 46 1 48 129 527 622 4.07e-13 65.9
Msa0141280 AT4G11900.8 37.500 96 46 1 48 129 458 553 4.13e-13 65.9
Msa0141280 AT1G30570.1 40.217 92 41 1 48 125 510 601 4.16e-13 65.9
Msa0141280 AT4G11900.7 37.500 96 46 1 48 129 527 622 4.41e-13 65.9
Msa0141280 AT1G72300.1 35.789 95 47 1 50 130 795 889 4.44e-13 65.9
Msa0141280 AT4G11900.10 37.500 96 46 1 48 129 527 622 4.89e-13 65.5
Msa0141280 AT4G11900.5 37.500 96 46 1 48 129 527 622 4.89e-13 65.5
Msa0141280 AT1G16120.1 37.500 96 46 1 49 130 420 515 5.73e-13 65.5
Msa0141280 AT3G15890.1 36.082 97 48 1 48 130 29 125 5.82e-13 65.1
Msa0141280 AT3G59350.5 34.653 101 51 1 45 130 100 200 6.28e-13 64.7
Msa0141280 AT1G67520.1 32.308 130 65 3 23 137 394 515 6.40e-13 65.5
Msa0141280 AT4G04570.3 35.556 90 44 1 54 129 180 269 6.64e-13 65.1
Msa0141280 AT5G59700.1 32.727 110 60 1 35 130 459 568 7.26e-13 65.1
Msa0141280 AT4G21230.1 34.951 103 52 2 48 135 323 425 7.44e-13 65.1
Msa0141280 AT3G59350.6 34.653 101 51 1 45 130 115 215 7.67e-13 65.1
Msa0141280 AT1G06840.1 36.364 110 55 2 30 125 598 706 7.97e-13 65.1
Msa0141280 AT3G59350.2 34.653 101 51 1 45 130 58 158 7.97e-13 64.7
Msa0141280 AT1G07650.4 35.714 112 57 2 43 140 450 560 8.12e-13 65.1
Msa0141280 AT4G34500.1 35.354 99 48 2 48 130 135 233 8.39e-13 64.7
Msa0141280 AT1G07650.3 35.714 112 57 2 43 140 637 747 8.55e-13 65.1
Msa0141280 AT3G59350.3 34.653 101 51 1 45 130 100 200 8.56e-13 64.7
Msa0141280 AT3G59350.1 34.653 101 51 1 45 130 100 200 8.56e-13 64.7
Msa0141280 AT1G67520.5 32.308 130 65 3 23 137 232 353 8.62e-13 65.1
Msa0141280 AT3G59350.4 34.653 101 51 1 45 130 100 200 8.96e-13 64.7
Msa0141280 AT1G67520.3 32.308 130 65 3 23 137 469 590 9.05e-13 65.1
Msa0141280 AT1G67520.6 32.308 130 65 3 23 137 476 597 9.06e-13 65.1
Msa0141280 AT4G04570.2 35.556 90 44 1 54 129 344 433 9.19e-13 64.7
Msa0141280 AT1G52540.2 35.052 97 49 1 48 130 27 123 9.31e-13 64.7
Msa0141280 AT1G67520.4 32.308 130 65 3 23 137 426 547 9.53e-13 64.7
Msa0141280 AT1G67520.2 32.308 130 65 3 23 137 469 590 9.69e-13 64.7
Msa0141280 AT1G67520.8 32.308 130 65 3 23 137 261 382 9.75e-13 64.7
Msa0141280 AT1G67520.7 32.308 130 65 3 23 137 261 382 9.75e-13 64.7
Msa0141280 AT1G07650.1 35.714 112 57 2 43 140 663 773 1.00e-12 64.7
Msa0141280 AT4G04570.1 35.556 90 44 1 54 129 344 433 1.01e-12 64.7
Msa0141280 AT1G07650.2 35.714 112 57 2 43 140 669 779 1.02e-12 64.7
Msa0141280 AT4G21400.6 35.417 96 48 1 48 129 351 446 1.16e-12 64.7
Msa0141280 AT4G21400.4 35.417 96 48 1 48 129 351 446 1.16e-12 64.7
Msa0141280 AT4G21400.5 35.417 96 48 1 48 129 351 446 1.16e-12 64.7
Msa0141280 AT5G01950.5 34.314 102 53 1 48 135 616 717 1.17e-12 64.7
Msa0141280 AT5G01950.2 35.417 96 48 1 48 129 531 626 1.23e-12 64.7
Msa0141280 AT1G15530.1 34.951 103 53 1 49 137 352 454 1.24e-12 64.3
Msa0141280 AT3G09010.2 34.746 118 60 2 26 129 17 131 1.46e-12 63.9
Msa0141280 AT5G01950.3 35.417 96 48 1 48 129 616 711 1.49e-12 64.3
Msa0141280 AT5G01950.1 35.417 96 48 1 48 129 616 711 1.49e-12 64.3
Msa0141280 AT5G01950.4 35.417 96 48 1 48 129 616 711 1.49e-12 64.3
Msa0141280 AT5G01950.8 35.417 96 48 1 48 129 616 711 1.49e-12 64.3
Msa0141280 AT1G79620.5 36.842 95 46 1 49 129 655 749 1.54e-12 64.3
Msa0141280 AT1G52540.1 35.052 97 49 1 48 130 30 126 1.72e-12 63.9
Msa0141280 AT4G39400.1 33.051 118 65 1 40 143 865 982 1.74e-12 64.3
Msa0141280 AT1G56145.3 35.577 104 53 1 45 134 571 674 1.87e-12 63.9
Msa0141280 AT5G01950.6 35.417 96 48 1 48 129 616 711 1.99e-12 63.9
Msa0141280 AT3G09010.1 34.746 118 60 2 26 129 17 131 2.15e-12 63.5
Msa0141280 AT1G56145.1 35.577 104 53 1 45 134 674 777 2.16e-12 63.9
Msa0141280 AT5G42440.1 32.692 104 56 1 46 135 69 172 2.32e-12 63.5
Msa0141280 AT5G06820.1 37.113 97 45 2 50 130 407 503 2.39e-12 63.5
Msa0141280 AT4G21400.8 34.694 98 50 1 46 129 210 307 2.66e-12 63.5
Msa0141280 AT2G01950.1 31.818 132 72 3 28 141 805 936 2.68e-12 63.5
Msa0141280 AT4G21400.7 34.694 98 50 1 46 129 311 408 3.09e-12 63.5
Msa0141280 AT5G37450.4 35.455 110 51 3 50 140 420 528 3.26e-12 63.2
Msa0141280 AT3G62220.1 33.654 104 56 1 44 134 55 158 3.54e-12 62.8
Msa0141280 AT3G62220.3 33.654 104 56 1 44 134 55 158 3.54e-12 62.8
Msa0141280 AT1G48210.5 31.818 110 62 1 45 141 55 164 4.11e-12 62.4
Msa0141280 AT1G48210.4 31.818 110 62 1 45 141 55 164 4.11e-12 62.4
Msa0141280 AT1G48210.6 31.818 110 62 1 45 141 55 164 4.11e-12 62.4
Msa0141280 AT1G48210.1 31.818 110 62 1 45 141 55 164 4.23e-12 62.8
Msa0141280 AT1G48210.7 31.818 110 62 1 45 141 55 164 4.23e-12 62.8
Msa0141280 AT1G48210.2 31.818 110 62 1 45 141 55 164 4.23e-12 62.8
Msa0141280 AT1G48210.3 31.818 110 62 1 45 141 55 164 4.23e-12 62.8
Msa0141280 AT4G23130.3 37.778 90 42 1 54 129 340 429 4.56e-12 62.8
Msa0141280 AT4G23130.1 37.778 90 42 1 54 129 336 425 4.66e-12 62.8
Msa0141280 AT4G23130.2 37.778 90 42 1 54 129 340 429 4.67e-12 62.8
Msa0141280 AT1G77280.2 33.607 122 65 2 30 135 373 494 4.70e-12 62.8
Msa0141280 AT1G77280.1 33.607 122 65 2 30 135 373 494 4.70e-12 62.8
Msa0141280 AT5G37450.1 37.234 94 45 1 50 129 599 692 5.36e-12 62.8
Msa0141280 AT5G37450.3 37.234 94 45 1 50 129 623 716 5.81e-12 62.8
Msa0141280 AT5G37450.2 37.234 94 45 1 50 129 647 740 5.88e-12 62.8
Msa0141280 AT5G54380.1 32.727 110 60 1 35 130 487 596 6.08e-12 62.4
Msa0141280 AT4G04510.2 34.444 90 45 1 54 129 337 426 6.15e-12 62.4
Msa0141280 AT4G04510.1 34.444 90 45 1 54 129 335 424 6.21e-12 62.4
Msa0141280 AT4G00970.2 29.496 139 76 3 5 129 299 429 6.25e-12 62.4
Msa0141280 AT1G16160.1 29.167 144 81 3 5 130 378 518 6.32e-12 62.4
Msa0141280 AT4G00970.1 29.496 139 76 3 5 129 299 429 6.42e-12 62.4
Msa0141280 AT2G30730.1 28.358 134 77 2 25 143 18 147 6.48e-12 62.0
Msa0141280 AT1G66920.2 33.981 103 52 2 49 137 300 400 6.98e-12 62.4
Msa0141280 AT3G45420.1 34.737 95 48 1 49 129 341 435 7.21e-12 62.4
Msa0141280 AT1G06700.1 30.709 127 70 3 20 130 31 155 7.27e-12 62.0
Msa0141280 AT1G06700.3 30.709 127 70 3 20 130 31 155 7.27e-12 62.0
Msa0141280 AT1G06700.2 30.709 127 70 3 20 130 31 155 7.27e-12 62.0
Msa0141280 AT1G66920.1 33.981 103 52 2 49 137 292 392 7.60e-12 62.4
Msa0141280 AT1G56145.2 35.354 99 50 1 45 129 674 772 7.89e-12 62.4
Msa0141280 AT1G76370.1 32.381 105 57 1 45 135 62 166 8.53e-12 62.0
Msa0141280 AT1G21590.2 32.381 105 58 1 49 140 360 464 8.66e-12 62.0
Msa0141280 AT1G21590.1 32.381 105 58 1 49 140 400 504 8.72e-12 62.0
Msa0141280 AT1G70450.1 33.333 96 50 1 49 130 40 135 8.76e-12 62.0
Msa0141280 AT3G26940.1 36.082 97 48 1 50 132 66 162 8.81e-12 62.0
Msa0141280 AT1G61480.1 33.333 96 50 1 48 129 486 581 9.41e-12 62.0
Msa0141280 AT3G55950.1 33.333 102 49 1 48 130 486 587 9.78e-12 62.0
Msa0141280 AT1G24030.3 31.000 100 52 1 51 133 1 100 1.08e-11 61.2
Msa0141280 AT2G30730.2 28.358 134 77 2 25 143 28 157 1.11e-11 61.6
Msa0141280 AT1G61360.2 31.068 103 57 1 48 136 407 509 1.25e-11 61.6
Msa0141280 AT1G61360.3 31.068 103 57 1 48 136 407 509 1.25e-11 61.6
Msa0141280 AT1G61360.4 31.068 103 57 1 48 136 407 509 1.25e-11 61.6
Msa0141280 AT1G61360.1 31.068 103 57 1 48 136 488 590 1.27e-11 61.6
Msa0141280 AT4G04540.3 34.444 90 45 1 54 129 349 438 1.63e-11 61.2
Msa0141280 AT1G11050.1 34.862 109 51 3 43 131 278 386 1.68e-11 61.2
Msa0141280 AT4G04540.4 34.444 90 45 1 54 129 320 409 1.80e-11 61.2
Msa0141280 AT5G45780.2 35.106 94 47 2 50 129 249 342 1.82e-11 61.2
Msa0141280 AT5G45780.1 35.106 94 47 2 50 129 292 385 1.88e-11 61.2
Msa0141280 AT4G04540.2 34.444 90 45 1 54 129 349 438 1.94e-11 60.8
Msa0141280 AT4G04540.1 34.444 90 45 1 54 129 349 438 1.96e-11 61.2
Msa0141280 AT2G20300.1 34.000 100 52 1 45 130 336 435 1.97e-11 61.2
Msa0141280 AT1G68690.4 34.000 100 52 1 49 134 368 467 2.02e-11 60.8
Msa0141280 AT1G61460.1 33.333 96 50 1 48 129 444 539 2.03e-11 60.8
Msa0141280 AT1G68690.1 34.000 100 52 1 49 134 368 467 2.04e-11 60.8
Msa0141280 AT1G68690.3 34.000 100 52 1 49 134 368 467 2.04e-11 60.8
Msa0141280 AT1G68690.2 34.000 100 52 1 49 134 368 467 2.04e-11 60.8
Msa0141280 AT1G55610.1 34.343 99 51 1 51 135 852 950 2.07e-11 61.2
Msa0141280 AT1G55610.2 34.343 99 51 1 51 135 852 950 2.07e-11 61.2
Msa0141280 AT3G46290.1 34.043 94 48 1 51 130 478 571 2.12e-11 60.8
Msa0141280 AT5G65700.1 36.170 94 44 1 53 130 689 782 2.22e-11 60.8
Msa0141280 AT5G65700.2 36.170 94 44 1 53 130 689 782 2.22e-11 60.8
Msa0141280 AT4G04490.1 34.444 90 45 1 54 129 336 425 2.31e-11 60.8
Msa0141280 AT4G11470.1 37.778 90 42 1 54 129 335 424 2.36e-11 60.8
Msa0141280 AT4G11470.2 37.778 90 42 1 54 129 340 429 2.36e-11 60.8
Msa0141280 AT3G09780.1 36.364 99 47 1 48 130 510 608 2.57e-11 60.8
Msa0141280 AT5G39030.2 31.304 115 64 2 33 134 469 581 3.07e-11 60.5
Msa0141280 AT1G70460.1 33.333 96 50 1 49 130 344 439 3.08e-11 60.5
Msa0141280 AT1G34210.1 35.052 97 48 1 48 129 295 391 3.18e-11 60.5
Msa0141280 AT1G34210.2 35.052 97 48 1 48 129 295 391 3.18e-11 60.5
Msa0141280 AT2G30740.5 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.2 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.10 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.11 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.6 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.15 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.4 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.14 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.7 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.1 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.13 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.8 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.12 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.3 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT2G30740.9 27.731 119 69 2 27 130 42 158 3.57e-11 60.1
Msa0141280 AT4G38830.1 34.409 93 47 1 51 129 337 429 4.08e-11 60.1
Msa0141280 AT5G03140.1 32.174 115 64 2 30 130 346 460 4.71e-11 60.1
Msa0141280 AT5G18610.1 34.951 103 52 2 45 132 70 172 5.41e-11 59.7
Msa0141280 AT5G18610.2 34.951 103 52 2 45 132 70 172 5.41e-11 59.7
Msa0141280 AT5G18610.3 34.951 103 52 2 45 132 70 172 5.41e-11 59.7
Msa0141280 AT4G00960.4 32.292 96 51 1 48 129 46 141 5.62e-11 59.3
Msa0141280 AT3G47090.1 32.456 114 57 3 50 143 693 806 5.66e-11 59.7
Msa0141280 AT3G16030.2 35.185 108 55 2 48 140 394 501 5.73e-11 59.7
Msa0141280 AT4G11480.1 33.333 111 60 1 51 147 314 424 6.46e-11 59.7
Msa0141280 AT3G16030.6 35.185 108 55 2 48 140 538 645 6.51e-11 59.7
Msa0141280 AT3G16030.1 35.185 108 55 2 48 140 517 624 6.95e-11 59.7
Msa0141280 AT3G47580.1 31.579 114 58 3 50 143 695 808 7.00e-11 59.7
Msa0141280 AT1G61420.3 32.292 96 51 1 48 129 334 429 7.40e-11 59.3
Msa0141280 AT1G61420.5 32.292 96 51 1 48 129 336 431 7.40e-11 59.3
Msa0141280 AT2G13790.1 35.052 97 48 1 48 129 284 380 7.62e-11 59.3
Msa0141280 AT5G39030.1 31.304 115 64 2 33 134 475 587 7.97e-11 59.3
Msa0141280 AT3G16030.4 35.185 108 55 2 48 140 538 645 8.08e-11 59.3
Msa0141280 AT3G16030.7 35.185 108 55 2 48 140 538 645 8.13e-11 59.3
Msa0141280 AT4G00960.1 32.292 96 51 1 48 129 46 141 8.60e-11 58.9
Msa0141280 AT4G23180.3 35.484 93 46 1 51 129 341 433 8.67e-11 59.3
Msa0141280 AT1G61420.2 32.292 96 51 1 48 129 486 581 8.70e-11 59.3
Msa0141280 AT1G61420.4 32.292 96 51 1 48 129 486 581 8.70e-11 59.3
Msa0141280 AT4G23180.2 35.484 93 46 1 51 129 341 433 8.88e-11 59.3
Msa0141280 AT1G61420.1 32.292 96 51 1 48 129 484 579 8.95e-11 59.3
Msa0141280 AT3G18810.1 32.174 115 60 2 44 140 323 437 8.96e-11 59.3
Msa0141280 AT4G23180.1 35.484 93 46 1 51 129 341 433 9.08e-11 59.3

Find 39 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAAAAGGCAGTTCCTTT+TGG 0.311786 1_3:+76029851 Msa0141280:intron
CTGCTTGGGTTCTGCATTGA+AGG 0.342294 1_3:+76029918 Msa0141280:CDS
CGTAAACAAAGCTAATGAAT+TGG 0.361876 1_3:+76029442 None:intergenic
TGCCATTGGGGTGGGAAAGA+TGG 0.362050 1_3:+76029757 Msa0141280:CDS
AAAATATAGTTCCCCTGCTT+GGG 0.403731 1_3:+76029904 Msa0141280:CDS
TTTCAAAGGATGCAACCATT+TGG 0.407165 1_3:-76029988 None:intergenic
TTGCTATGGACAGTGCCATT+GGG 0.412217 1_3:+76029744 Msa0141280:CDS
AAAGACTAACCTCAACAATA+TGG 0.419416 1_3:+76029690 Msa0141280:CDS
CTTCAATGCAGAACCCAAGC+AGG 0.451098 1_3:-76029917 None:intergenic
TCCACAGATCGCTATATTAG+TGG 0.453541 1_3:+76029667 Msa0141280:intron
GTAAACAAAGCTAATGAATT+GGG 0.460357 1_3:+76029443 None:intergenic
GACCATTGGGCAGTCTTCCC+TGG 0.463225 1_3:-76029790 None:intergenic
GCCATTGGGGTGGGAAAGAT+GGG 0.464013 1_3:+76029758 Msa0141280:CDS
AGTGAAGTTATGAGATTGAA+AGG 0.464169 1_3:+76030011 Msa0141280:CDS
AACGGCTAGCAACTGACCAT+TGG 0.466864 1_3:-76029804 None:intergenic
ACGGCTAGCAACTGACCATT+GGG 0.485569 1_3:-76029803 None:intergenic
CAAATGGAAGGCTTTCCAAA+TGG 0.503085 1_3:+76029973 Msa0141280:CDS
TTTGCTATGGACAGTGCCAT+TGG 0.504741 1_3:+76029743 Msa0141280:CDS
ACCAAAACGTAGTTTCCAAA+AGG 0.516878 1_3:-76029866 None:intergenic
GCATACGCATACATGTCAAA+TGG 0.524083 1_3:+76029957 Msa0141280:CDS
CGAATATTTACATCCGCGAC+TGG 0.528715 1_3:+76029523 Msa0141280:CDS
TTCTTCCAACCATATTGTTG+AGG 0.545148 1_3:-76029699 None:intergenic
GTGAAGTTATGAGATTGAAA+GGG 0.545900 1_3:+76030012 Msa0141280:CDS
GAAAGGGAAAACATCGCACT+TGG 0.550488 1_3:+76030028 Msa0141280:CDS
ACTAACCTCAACAATATGGT+TGG 0.553387 1_3:+76029694 Msa0141280:CDS
TCCCATCTTTCCCACCCCAA+TGG 0.560875 1_3:-76029759 None:intergenic
TGAAGGAAATGAAAGGATGT+TGG 0.566706 1_3:+76029935 Msa0141280:CDS
AAAGATGGGAATGATGTACC+AGG 0.570261 1_3:+76029772 Msa0141280:CDS
TGCTATGGACAGTGCCATTG+GGG 0.571450 1_3:+76029745 Msa0141280:CDS
TTCAATGCAGAACCCAAGCA+GGG 0.576376 1_3:-76029916 None:intergenic
ATGGACAGTGCCATTGGGGT+GGG 0.590036 1_3:+76029749 Msa0141280:CDS
TATGGACAGTGCCATTGGGG+TGG 0.590498 1_3:+76029748 Msa0141280:CDS
CTTTCTTTATGTACCAGTCG+CGG 0.593479 1_3:-76029536 None:intergenic
ACGCATACATGTCAAATGGA+AGG 0.618850 1_3:+76029961 Msa0141280:CDS
TCTGCATTGAAGGAAATGAA+AGG 0.654498 1_3:+76029928 Msa0141280:CDS
TCAATGCAGAACCCAAGCAG+GGG 0.670656 1_3:-76029915 None:intergenic
TACCAGGGAAGACTGCCCAA+TGG 0.673765 1_3:+76029788 Msa0141280:CDS
GGTACATAAAGAAAGCAAAG+AGG 0.691289 1_3:+76029544 Msa0141280:CDS
AAGATGGGAATGATGTACCA+GGG 0.714008 1_3:+76029773 Msa0141280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATAATTTTTTAGTTTAAT+TGG + chr1_3:76029608-76029627 Msa0141280:intron 10.0%
! TGACTCTTGAGTTATTTAAA+AGG + chr1_3:76029838-76029857 Msa0141280:intron 25.0%
AATTATATTTGCTCCATCGT+CGG + chr1_3:76029467-76029486 Msa0141280:intron 30.0%
GTTTAAAAAGAGAGTCAATG+AGG - chr1_3:76029576-76029595 None:intergenic 30.0%
AAAGACTAACCTCAACAATA+TGG + chr1_3:76029690-76029709 Msa0141280:CDS 30.0%
AGAGTCAAATAGTCTCTTAA+CGG - chr1_3:76029825-76029844 None:intergenic 30.0%
! ATTTAAAAGGCAGTTCCTTT+TGG + chr1_3:76029851-76029870 Msa0141280:intron 30.0%
!! CTCATAACTTCACTTTTCAA+AGG - chr1_3:76030005-76030024 None:intergenic 30.0%
AGTGAAGTTATGAGATTGAA+AGG + chr1_3:76030011-76030030 Msa0141280:CDS 30.0%
GTGAAGTTATGAGATTGAAA+GGG + chr1_3:76030012-76030031 Msa0141280:CDS 30.0%
GGTACATAAAGAAAGCAAAG+AGG + chr1_3:76029544-76029563 Msa0141280:CDS 35.0%
ACTAACCTCAACAATATGGT+TGG + chr1_3:76029694-76029713 Msa0141280:CDS 35.0%
TTCTTCCAACCATATTGTTG+AGG - chr1_3:76029702-76029721 None:intergenic 35.0%
!! TCCTTTTGGAAACTACGTTT+TGG + chr1_3:76029865-76029884 Msa0141280:CDS 35.0%
ACCAAAACGTAGTTTCCAAA+AGG - chr1_3:76029869-76029888 None:intergenic 35.0%
AAAAATATAGTTCCCCTGCT+TGG + chr1_3:76029903-76029922 Msa0141280:CDS 35.0%
AAAATATAGTTCCCCTGCTT+GGG + chr1_3:76029904-76029923 Msa0141280:CDS 35.0%
TCTGCATTGAAGGAAATGAA+AGG + chr1_3:76029928-76029947 Msa0141280:CDS 35.0%
TGAAGGAAATGAAAGGATGT+TGG + chr1_3:76029935-76029954 Msa0141280:CDS 35.0%
TTTCAAAGGATGCAACCATT+TGG - chr1_3:76029991-76030010 None:intergenic 35.0%
CTTTCTTTATGTACCAGTCG+CGG - chr1_3:76029539-76029558 None:intergenic 40.0%
TCCACAGATCGCTATATTAG+TGG + chr1_3:76029667-76029686 Msa0141280:intron 40.0%
TCCACTAATATAGCGATCTG+TGG - chr1_3:76029671-76029690 None:intergenic 40.0%
AAAGATGGGAATGATGTACC+AGG + chr1_3:76029772-76029791 Msa0141280:CDS 40.0%
AAGATGGGAATGATGTACCA+GGG + chr1_3:76029773-76029792 Msa0141280:CDS 40.0%
GCATACGCATACATGTCAAA+TGG + chr1_3:76029957-76029976 Msa0141280:CDS 40.0%
ACGCATACATGTCAAATGGA+AGG + chr1_3:76029961-76029980 Msa0141280:CDS 40.0%
CAAATGGAAGGCTTTCCAAA+TGG + chr1_3:76029973-76029992 Msa0141280:CDS 40.0%
CGAATATTTACATCCGCGAC+TGG + chr1_3:76029523-76029542 Msa0141280:CDS 45.0%
! CGCAACTGACTGTTTTGCTA+TGG + chr1_3:76029730-76029749 Msa0141280:CDS 45.0%
! TTTGCTATGGACAGTGCCAT+TGG + chr1_3:76029743-76029762 Msa0141280:CDS 45.0%
! TTGCTATGGACAGTGCCATT+GGG + chr1_3:76029744-76029763 Msa0141280:CDS 45.0%
TTCAATGCAGAACCCAAGCA+GGG - chr1_3:76029919-76029938 None:intergenic 45.0%
GAAAGGGAAAACATCGCACT+TGG + chr1_3:76030028-76030047 Msa0141280:CDS 45.0%
! TGCTATGGACAGTGCCATTG+GGG + chr1_3:76029745-76029764 Msa0141280:CDS 50.0%
ACGGCTAGCAACTGACCATT+GGG - chr1_3:76029806-76029825 None:intergenic 50.0%
AACGGCTAGCAACTGACCAT+TGG - chr1_3:76029807-76029826 None:intergenic 50.0%
TCAATGCAGAACCCAAGCAG+GGG - chr1_3:76029918-76029937 None:intergenic 50.0%
CTTCAATGCAGAACCCAAGC+AGG - chr1_3:76029920-76029939 None:intergenic 50.0%
CTGCTTGGGTTCTGCATTGA+AGG + chr1_3:76029918-76029937 Msa0141280:CDS 50.0%
TTTGCTCCATCGTCGGCAGA+AGG + chr1_3:76029474-76029493 Msa0141280:intron 55.0%
! TATGGACAGTGCCATTGGGG+TGG + chr1_3:76029748-76029767 Msa0141280:CDS 55.0%
! ATGGACAGTGCCATTGGGGT+GGG + chr1_3:76029749-76029768 Msa0141280:CDS 55.0%
TGCCATTGGGGTGGGAAAGA+TGG + chr1_3:76029757-76029776 Msa0141280:CDS 55.0%
GCCATTGGGGTGGGAAAGAT+GGG + chr1_3:76029758-76029777 Msa0141280:CDS 55.0%
TCCCATCTTTCCCACCCCAA+TGG - chr1_3:76029762-76029781 None:intergenic 55.0%
TACCAGGGAAGACTGCCCAA+TGG + chr1_3:76029788-76029807 Msa0141280:CDS 55.0%
TCGTGTCCTTCTGCCGACGA+TGG - chr1_3:76029483-76029502 None:intergenic 60.0%
GACCATTGGGCAGTCTTCCC+TGG - chr1_3:76029793-76029812 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 76029456 76030055 76029456 ID=Msa0141280;Name=Msa0141280
chr1_3 mRNA 76029456 76030055 76029456 ID=Msa0141280-mRNA-1;Parent=Msa0141280;Name=Msa0141280-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0.33|0|1|0|0|4|0|147
chr1_3 exon 76029456 76029484 76029456 ID=Msa0141280-mRNA-1:exon:26583;Parent=Msa0141280-mRNA-1
chr1_3 exon 76029493 76029565 76029493 ID=Msa0141280-mRNA-1:exon:26584;Parent=Msa0141280-mRNA-1
chr1_3 exon 76029674 76029823 76029674 ID=Msa0141280-mRNA-1:exon:26585;Parent=Msa0141280-mRNA-1
chr1_3 exon 76029864 76030055 76029864 ID=Msa0141280-mRNA-1:exon:26586;Parent=Msa0141280-mRNA-1
chr1_3 CDS 76029456 76029484 76029456 ID=Msa0141280-mRNA-1:cds;Parent=Msa0141280-mRNA-1
chr1_3 CDS 76029493 76029565 76029493 ID=Msa0141280-mRNA-1:cds;Parent=Msa0141280-mRNA-1
chr1_3 CDS 76029674 76029823 76029674 ID=Msa0141280-mRNA-1:cds;Parent=Msa0141280-mRNA-1
chr1_3 CDS 76029864 76030055 76029864 ID=Msa0141280-mRNA-1:cds;Parent=Msa0141280-mRNA-1
Gene Sequence

>Msa0141280

ATGAATTGGGCAATTATATTTGCTCCATCAAGGACACGAGTGTTAGTTAATCAGCTGCACGAATATTTACATCCGCGACTGGTACATAAAGAAAGCAAAGAGATCGCTATATTAGTGGAAAGACTAACCTCAACAATATGGTTGGAAGAACTGCGCGACGCAACTGACTGTTTTGCTATGGACAGTGCCATTGGGGTGGGAAAGATGGGAATGATGTACCAGGGAAGACTGCCCAATGGTCAGTTGCTAGCCTTCCTTTTGGAAACTACGTTTTGGTGCAAGTACAGACACAAAAATATAGTTCCCCTGCTTGGGTTCTGCATTGAAGGAAATGAAAGGATGTTGGCATACGCATACATGTCAAATGGAAGGCTTTCCAAATGGTTGCATCCTTTGAAAAGTGAAGTTATGAGATTGAAAGGGAAAACATCGCACTTGGAGTAG
Protein sequence

>Msa0141280

MNWAIIFAPSRTRVLVNQLHEYLHPRLVHKESKEIAILVERLTSTIWLEELRDATDCFAMDSAIGVGKMGMMYQGRLPNGQLLAFLLETTFWCKYRHKNIVPLLGFCIEGNERMLAYAYMSNGRLSKWLHPLKSEVMRLKGKTSHLE*