Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143070 | XP_003593962.1 | 67.218 | 363 | 63 | 6 | 39 | 352 | 10 | 365 | 4.17e-155 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143070 | G7IPZ5 | 67.218 | 363 | 63 | 6 | 39 | 352 | 10 | 365 | 1.99e-155 | 451 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0143070 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143070 | MtrunA17_Chr2g0286191 | 67.218 | 363 | 63 | 6 | 39 | 352 | 10 | 365 | 3.84e-159 | 451 |
| Msa0143070 | MtrunA17_Chr2g0286221 | 77.914 | 163 | 34 | 1 | 190 | 350 | 11 | 173 | 1.55e-86 | 259 |
| Msa0143070 | MtrunA17_Chr2g0295741 | 37.067 | 375 | 173 | 10 | 35 | 350 | 10 | 380 | 7.90e-65 | 211 |
| Msa0143070 | MtrunA17_Chr2g0295731 | 37.394 | 353 | 162 | 8 | 51 | 350 | 35 | 381 | 9.33e-64 | 208 |
| Msa0143070 | MtrunA17_Chr2g0295761 | 38.506 | 348 | 150 | 9 | 59 | 349 | 52 | 392 | 6.65e-63 | 206 |
| Msa0143070 | MtrunA17_Chr4g0067121 | 37.243 | 341 | 160 | 7 | 62 | 350 | 46 | 384 | 4.63e-62 | 204 |
| Msa0143070 | MtrunA17_Chr2g0296121 | 39.143 | 350 | 154 | 9 | 54 | 350 | 117 | 460 | 2.37e-61 | 204 |
| Msa0143070 | MtrunA17_Chr2g0296151 | 37.714 | 350 | 163 | 8 | 54 | 350 | 27 | 374 | 6.84e-61 | 201 |
| Msa0143070 | MtrunA17_Chr2g0296301 | 32.796 | 372 | 192 | 7 | 25 | 345 | 1 | 365 | 1.03e-54 | 185 |
| Msa0143070 | MtrunA17_Chr2g0296711 | 34.321 | 405 | 189 | 12 | 28 | 362 | 5 | 402 | 2.61e-54 | 184 |
| Msa0143070 | MtrunA17_Chr2g0296111 | 35.967 | 367 | 167 | 10 | 44 | 350 | 16 | 374 | 3.05e-54 | 183 |
| Msa0143070 | MtrunA17_Chr2g0296191 | 34.857 | 350 | 165 | 8 | 52 | 345 | 167 | 509 | 4.93e-49 | 177 |
| Msa0143070 | MtrunA17_Chr2g0296191 | 32.170 | 401 | 190 | 14 | 17 | 343 | 602 | 994 | 2.16e-42 | 158 |
| Msa0143070 | MtrunA17_Chr4g0067671 | 34.884 | 344 | 159 | 11 | 43 | 329 | 20 | 355 | 1.13e-48 | 168 |
| Msa0143070 | MtrunA17_Chr2g0296741 | 33.514 | 370 | 174 | 12 | 56 | 362 | 59 | 419 | 1.54e-48 | 169 |
| Msa0143070 | MtrunA17_Chr2g0296221 | 34.986 | 363 | 166 | 11 | 47 | 346 | 59 | 414 | 4.89e-48 | 168 |
| Msa0143070 | MtrunA17_Chr2g0296291 | 39.062 | 256 | 147 | 6 | 114 | 362 | 161 | 414 | 8.81e-48 | 167 |
| Msa0143070 | MtrunA17_Chr4g0067141 | 34.694 | 343 | 161 | 8 | 58 | 344 | 35 | 370 | 1.25e-47 | 166 |
| Msa0143070 | MtrunA17_Chr2g0296721 | 32.884 | 371 | 192 | 9 | 47 | 362 | 30 | 398 | 5.01e-46 | 162 |
| Msa0143070 | MtrunA17_Chr2g0296251 | 41.870 | 246 | 122 | 7 | 114 | 346 | 161 | 398 | 9.27e-46 | 161 |
| Msa0143070 | MtrunA17_Chr2g0315731 | 33.155 | 374 | 188 | 11 | 47 | 362 | 50 | 419 | 1.62e-45 | 161 |
| Msa0143070 | MtrunA17_Chr2g0296231 | 34.946 | 372 | 165 | 15 | 41 | 346 | 20 | 380 | 7.80e-44 | 156 |
| Msa0143070 | MtrunA17_Chr2g0296131 | 48.366 | 153 | 75 | 3 | 197 | 345 | 9 | 161 | 4.00e-42 | 145 |
| Msa0143070 | MtrunA17_Chr2g0296171 | 38.672 | 256 | 138 | 7 | 105 | 348 | 149 | 397 | 4.86e-42 | 152 |
| Msa0143070 | MtrunA17_Chr2g0296551 | 46.154 | 182 | 92 | 4 | 169 | 346 | 5 | 184 | 5.42e-42 | 145 |
| Msa0143070 | MtrunA17_Chr2g0296161 | 48.750 | 160 | 78 | 3 | 195 | 350 | 3 | 162 | 7.01e-42 | 144 |
| Msa0143070 | MtrunA17_Chr2g0296211 | 33.660 | 306 | 137 | 10 | 55 | 346 | 105 | 358 | 1.35e-39 | 144 |
| Msa0143070 | MtrunA17_Chr4g0001831 | 29.971 | 347 | 189 | 8 | 55 | 347 | 25 | 371 | 9.65e-38 | 139 |
| Msa0143070 | MtrunA17_Chr2g0296701 | 45.833 | 168 | 87 | 3 | 199 | 362 | 5 | 172 | 1.35e-37 | 133 |
| Msa0143070 | MtrunA17_Chr2g0296181 | 31.728 | 353 | 157 | 11 | 50 | 346 | 33 | 357 | 1.06e-34 | 131 |
| Msa0143070 | MtrunA17_Chr2g0296751 | 51.181 | 127 | 59 | 2 | 223 | 346 | 3 | 129 | 3.23e-32 | 119 |
| Msa0143070 | MtrunA17_Chr2g0295721 | 50.877 | 114 | 53 | 2 | 195 | 305 | 3 | 116 | 2.61e-29 | 109 |
| Msa0143070 | MtrunA17_Chr8g0377781 | 30.085 | 236 | 152 | 8 | 114 | 340 | 137 | 368 | 7.68e-20 | 90.1 |
| Msa0143070 | MtrunA17_Chr8g0377801 | 26.891 | 238 | 165 | 6 | 114 | 344 | 150 | 385 | 4.16e-17 | 82.0 |
| Msa0143070 | MtrunA17_Chr4g0067131 | 45.679 | 81 | 41 | 2 | 265 | 342 | 1 | 81 | 2.06e-15 | 70.9 |
| Msa0143070 | MtrunA17_Chr8g0339041 | 24.227 | 194 | 125 | 5 | 169 | 349 | 169 | 353 | 8.16e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143070 | AT5G07900.1 | 32.635 | 334 | 170 | 8 | 65 | 343 | 66 | 399 | 1.08e-45 | 162 |
| Msa0143070 | AT1G21150.3 | 29.339 | 242 | 163 | 4 | 114 | 347 | 113 | 354 | 6.88e-29 | 115 |
| Msa0143070 | AT1G21150.1 | 29.339 | 242 | 163 | 4 | 114 | 347 | 149 | 390 | 1.61e-28 | 115 |
| Msa0143070 | AT1G21150.2 | 29.339 | 242 | 163 | 4 | 114 | 347 | 213 | 454 | 2.96e-28 | 115 |
| Msa0143070 | AT1G61990.2 | 22.705 | 414 | 219 | 13 | 25 | 343 | 1 | 408 | 8.40e-16 | 79.0 |
| Msa0143070 | AT1G61990.1 | 22.705 | 414 | 219 | 13 | 25 | 343 | 1 | 408 | 8.40e-16 | 79.0 |
| Msa0143070 | AT1G62010.1 | 26.056 | 284 | 160 | 9 | 114 | 356 | 131 | 405 | 8.68e-16 | 79.0 |
| Msa0143070 | AT1G61970.2 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.7 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.6 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.3 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.5 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.4 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61970.1 | 23.430 | 414 | 193 | 17 | 25 | 329 | 1 | 399 | 1.69e-15 | 77.8 |
| Msa0143070 | AT1G61980.3 | 26.545 | 275 | 153 | 9 | 114 | 343 | 145 | 415 | 8.18e-15 | 75.9 |
| Msa0143070 | AT1G61980.2 | 26.545 | 275 | 153 | 9 | 114 | 343 | 145 | 415 | 8.18e-15 | 75.9 |
| Msa0143070 | AT1G61980.1 | 26.545 | 275 | 153 | 9 | 114 | 343 | 145 | 415 | 8.18e-15 | 75.9 |
| Msa0143070 | AT5G64950.1 | 27.642 | 246 | 150 | 9 | 120 | 344 | 138 | 376 | 7.10e-13 | 69.7 |
| Msa0143070 | AT1G62120.1 | 23.020 | 404 | 208 | 17 | 55 | 359 | 37 | 436 | 3.71e-12 | 67.8 |
| Msa0143070 | AT1G61960.1 | 31.667 | 120 | 76 | 2 | 230 | 343 | 332 | 451 | 1.51e-11 | 65.9 |
| Msa0143070 | AT3G46950.1 | 24.731 | 279 | 146 | 10 | 34 | 261 | 23 | 288 | 1.93e-11 | 65.5 |
Find 58 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTTCCCATACGGATTT+TGG | 0.131006 | 1_4:-1983573 | None:intergenic |
| CTGAAGGAACAACAAGTTTA+AGG | 0.255422 | 1_4:-1980117 | None:intergenic |
| ATGAAGTCGTTTGGAGAGTT+TGG | 0.256239 | 1_4:-1983041 | None:intergenic |
| TGACTGTGAAATGATGATTT+TGG | 0.257397 | 1_4:-1982976 | None:intergenic |
| TCAATCCAAAGGTTTGATTA+AGG | 0.262442 | 1_4:+1983815 | Msa0143070:CDS |
| ATTCAATTCCTGCTTCAAAA+TGG | 0.298684 | 1_4:+1983393 | Msa0143070:CDS |
| TCTTATGTTGAATCATAGTT+TGG | 0.300486 | 1_4:+1983251 | Msa0143070:CDS |
| GAGATGGGAATTTAGAATAA+AGG | 0.311834 | 1_4:-1983365 | None:intergenic |
| AGATGTTTCAACTTTCAATA+AGG | 0.340961 | 1_4:+1983950 | Msa0143070:CDS |
| GTGTTGGAAGTAAAACAATT+AGG | 0.360849 | 1_4:+1983498 | Msa0143070:CDS |
| AAACTATGATTCAACATAAG+AGG | 0.367032 | 1_4:-1983249 | None:intergenic |
| GATTAATGCGTATAAGAAAT+GGG | 0.369032 | 1_4:+1983596 | Msa0143070:CDS |
| AGATTAATGCGTATAAGAAA+TGG | 0.381339 | 1_4:+1983595 | Msa0143070:CDS |
| CATAACAAGCATCGGATGTT+TGG | 0.381545 | 1_4:-1983748 | None:intergenic |
| TTCCTTCAGCTCTCATGCTC+TGG | 0.388188 | 1_4:+1980131 | Msa0143070:CDS |
| TGAAGAAATTTCAAAACCCT+TGG | 0.402619 | 1_4:-1983795 | None:intergenic |
| AGCATCCTTAATCAAACCTT+TGG | 0.408692 | 1_4:-1983820 | None:intergenic |
| TATGGTGAGTTTAGAGAAAA+GGG | 0.416619 | 1_4:+1983767 | Msa0143070:CDS |
| TTATGGTGAGTTTAGAGAAA+AGG | 0.428710 | 1_4:+1983766 | Msa0143070:CDS |
| CAAACATCCGATGCTTGTTA+TGG | 0.429682 | 1_4:+1983749 | Msa0143070:CDS |
| GTCGTTGAGATGAAGTCGTT+TGG | 0.431177 | 1_4:-1983050 | None:intergenic |
| TTTGATTAAGGATGCTAAGT+TGG | 0.445791 | 1_4:+1983827 | Msa0143070:CDS |
| TCTTAGCATGTAGTGCGATA+AGG | 0.479997 | 1_4:-1983545 | None:intergenic |
| TTGAAATTTCTTCAATCCAA+AGG | 0.481678 | 1_4:+1983804 | Msa0143070:CDS |
| GAGAGTTTGGAAGCTGTTTG+TGG | 0.487427 | 1_4:-1983028 | None:intergenic |
| TTGAAGAAGATGAAGAAAAG+AGG | 0.504436 | 1_4:-1982921 | None:intergenic |
| ACTGGGAATTTGAAAAGCCA+TGG | 0.514254 | 1_4:-1983100 | None:intergenic |
| ATTAATCTTCCTTTCCCATA+CGG | 0.515016 | 1_4:-1983580 | None:intergenic |
| TAGAGAAAAGGGTTATTCCA+AGG | 0.522261 | 1_4:+1983778 | Msa0143070:CDS |
| AGATGAAGAAAAGAGGAAGA+AGG | 0.529780 | 1_4:-1982914 | None:intergenic |
| CTCTCATTATTCAAATCCCA+TGG | 0.530565 | 1_4:+1983083 | Msa0143070:CDS |
| GAGATTTGTGAATTGCTTCG+AGG | 0.533006 | 1_4:+1983887 | Msa0143070:CDS |
| TACCAGAGCATGAGAGCTGA+AGG | 0.534799 | 1_4:-1980133 | None:intergenic |
| GTCCAAAATCCGTATGGGAA+AGG | 0.543559 | 1_4:+1983571 | Msa0143070:CDS |
| AGATTAGTCCAAAATCCGTA+TGG | 0.549136 | 1_4:+1983565 | Msa0143070:CDS |
| CTGGGAATTTGAAAAGCCAT+GGG | 0.557976 | 1_4:-1983099 | None:intergenic |
| AGAGAAAAGGGTTATTCCAA+GGG | 0.558527 | 1_4:+1983779 | Msa0143070:CDS |
| GAAGTATCCATGGTGTATGT+TGG | 0.562557 | 1_4:+1983653 | Msa0143070:CDS |
| ATGGTGTATGTTGGCATCTG+TGG | 0.563796 | 1_4:+1983662 | Msa0143070:CDS |
| CAATCTTCAAAGCAACGCAA+AGG | 0.567355 | 1_4:+1983984 | Msa0143070:CDS |
| AAACTCACCATAACAAGCAT+CGG | 0.567644 | 1_4:-1983756 | None:intergenic |
| ACTGCCTTCTCAAATACTGC+AGG | 0.569710 | 1_4:-1983477 | None:intergenic |
| AATCTTCAAAGCAACGCAAA+GGG | 0.571909 | 1_4:+1983985 | Msa0143070:CDS |
| GCAATGTTTGAGAGCTGCAA+TGG | 0.572268 | 1_4:-1983334 | None:intergenic |
| AGTATTTGAGAAGGCAGTGT+TGG | 0.578490 | 1_4:+1983482 | Msa0143070:CDS |
| GATTCTAAGTTGCAGTGACA+TGG | 0.589689 | 1_4:-1984022 | None:intergenic |
| GATTAGTCCAAAATCCGTAT+GGG | 0.594092 | 1_4:+1983566 | Msa0143070:CDS |
| TCTTGCAAGCAAACATGGAG+AGG | 0.595136 | 1_4:+1980059 | None:intergenic |
| ATTAATGCGTATAAGAAATG+GGG | 0.599170 | 1_4:+1983597 | Msa0143070:CDS |
| TTTGATAAAATCATAACATG+GGG | 0.599823 | 1_4:-1983286 | None:intergenic |
| CTTGCAAGCAAACATGGAGA+GGG | 0.608429 | 1_4:+1980060 | None:intergenic |
| ATGCGTATAAGAAATGGGGT+TGG | 0.624037 | 1_4:+1983601 | Msa0143070:CDS |
| CATGGGATTTGAATAATGAG+AGG | 0.633838 | 1_4:-1983082 | None:intergenic |
| AAAAGAGGAAGAAGGTGTTG+TGG | 0.636417 | 1_4:-1982906 | None:intergenic |
| GAAACCTGCAGTATTTGAGA+AGG | 0.637908 | 1_4:+1983473 | Msa0143070:CDS |
| TGCACCTTTCAAAGTCTCTG+AGG | 0.644963 | 1_4:+1983851 | Msa0143070:CDS |
| ACATCCTCAGAGACTTTGAA+AGG | 0.652583 | 1_4:-1983855 | None:intergenic |
| ACAGATGCCAACATACACCA+TGG | 0.670800 | 1_4:-1983660 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr1_4:1980897-1980916 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATT+TGG | + | chr1_4:1980903-1980922 | Msa0143070:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr1_4:1980897-1980916 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATT+TGG | + | chr1_4:1980903-1980922 | Msa0143070:intron | 0.0% |
| !! | TTATTATTAATTTAACAACT+TGG | + | chr1_4:1980828-1980847 | Msa0143070:intron | 10.0% |
| !! | ATTTAGATATTTAAAGATTT+GGG | + | chr1_4:1982211-1982230 | Msa0143070:intron | 10.0% |
| !! | ATTAAAATGAAAATAGAAAA+TGG | - | chr1_4:1982310-1982329 | None:intergenic | 10.0% |
| !! | TTATTATTAATTTAACAACT+TGG | + | chr1_4:1980828-1980847 | Msa0143070:intron | 10.0% |
| !! | ATTTAGATATTTAAAGATTT+GGG | + | chr1_4:1982211-1982230 | Msa0143070:intron | 10.0% |
| !! | ATTAAAATGAAAATAGAAAA+TGG | - | chr1_4:1982310-1982329 | None:intergenic | 10.0% |
| !! | ATCTAAATTGTACTATTTAT+TGG | - | chr1_4:1980174-1980193 | None:intergenic | 15.0% |
| !! | TGAACCTATATATATATATA+GGG | + | chr1_4:1980467-1980486 | Msa0143070:intron | 15.0% |
| !! | ACATTTAACTAATGAAATTT+AGG | + | chr1_4:1981181-1981200 | Msa0143070:intron | 15.0% |
| !!! | AAACTTTAAAAAGTTGAATT+AGG | + | chr1_4:1981261-1981280 | Msa0143070:intron | 15.0% |
| !!! | ATTGATTATTTAAGTTGAAT+TGG | - | chr1_4:1981628-1981647 | None:intergenic | 15.0% |
| !!! | TATTATACATTTTTGAATTG+AGG | - | chr1_4:1981824-1981843 | None:intergenic | 15.0% |
| !! | ATTAATAATAGTATGTATCA+TGG | - | chr1_4:1982041-1982060 | None:intergenic | 15.0% |
| !!! | TTAAAAGAGTTTAGTTTATA+TGG | - | chr1_4:1982078-1982097 | None:intergenic | 15.0% |
| !! | GATTTAGATATTTAAAGATT+TGG | + | chr1_4:1982210-1982229 | Msa0143070:intron | 15.0% |
| !! | TTTAGATATTTAAAGATTTG+GGG | + | chr1_4:1982212-1982231 | Msa0143070:intron | 15.0% |
| !!! | TTTGTCTTTTTAATATTAGT+GGG | - | chr1_4:1982610-1982629 | None:intergenic | 15.0% |
| !! | AAAAAGACAAACATTAAATA+AGG | + | chr1_4:1982619-1982638 | Msa0143070:intron | 15.0% |
| !! | AAAAGACAAACATTAAATAA+GGG | + | chr1_4:1982620-1982639 | Msa0143070:intron | 15.0% |
| !!! | AGAAAATATCACAATTTTTA+AGG | - | chr1_4:1982674-1982693 | None:intergenic | 15.0% |
| !!! | TGTGATATTTTCTTATAAAT+AGG | + | chr1_4:1982681-1982700 | Msa0143070:intron | 15.0% |
| !!! | TAGATTTTCAAAAAAATTGT+TGG | - | chr1_4:1982708-1982727 | None:intergenic | 15.0% |
| !! | TTGAAAATCTACTTATATAT+AGG | + | chr1_4:1982717-1982736 | Msa0143070:intron | 15.0% |
| !!! | TTTTGATAAAATCATAACAT+GGG | - | chr1_4:1983290-1983309 | None:intergenic | 15.0% |
| !! | ATCTAAATTGTACTATTTAT+TGG | - | chr1_4:1980174-1980193 | None:intergenic | 15.0% |
| !! | TGAACCTATATATATATATA+GGG | + | chr1_4:1980467-1980486 | Msa0143070:intron | 15.0% |
| !! | ACATTTAACTAATGAAATTT+AGG | + | chr1_4:1981181-1981200 | Msa0143070:intron | 15.0% |
| !!! | AAACTTTAAAAAGTTGAATT+AGG | + | chr1_4:1981261-1981280 | Msa0143070:intron | 15.0% |
| !!! | ATTGATTATTTAAGTTGAAT+TGG | - | chr1_4:1981628-1981647 | None:intergenic | 15.0% |
| !!! | TATTATACATTTTTGAATTG+AGG | - | chr1_4:1981824-1981843 | None:intergenic | 15.0% |
| !! | ATTAATAATAGTATGTATCA+TGG | - | chr1_4:1982041-1982060 | None:intergenic | 15.0% |
| !!! | TTAAAAGAGTTTAGTTTATA+TGG | - | chr1_4:1982078-1982097 | None:intergenic | 15.0% |
| !! | GATTTAGATATTTAAAGATT+TGG | + | chr1_4:1982210-1982229 | Msa0143070:intron | 15.0% |
| !! | TTTAGATATTTAAAGATTTG+GGG | + | chr1_4:1982212-1982231 | Msa0143070:intron | 15.0% |
| !!! | TTTGTCTTTTTAATATTAGT+GGG | - | chr1_4:1982610-1982629 | None:intergenic | 15.0% |
| !! | AAAAAGACAAACATTAAATA+AGG | + | chr1_4:1982619-1982638 | Msa0143070:intron | 15.0% |
| !! | AAAAGACAAACATTAAATAA+GGG | + | chr1_4:1982620-1982639 | Msa0143070:intron | 15.0% |
| !!! | AGAAAATATCACAATTTTTA+AGG | - | chr1_4:1982674-1982693 | None:intergenic | 15.0% |
| !!! | TGTGATATTTTCTTATAAAT+AGG | + | chr1_4:1982681-1982700 | Msa0143070:intron | 15.0% |
| !!! | TAGATTTTCAAAAAAATTGT+TGG | - | chr1_4:1982708-1982727 | None:intergenic | 15.0% |
| !! | TTGAAAATCTACTTATATAT+AGG | + | chr1_4:1982717-1982736 | Msa0143070:intron | 15.0% |
| !!! | TTTTGATAAAATCATAACAT+GGG | - | chr1_4:1983290-1983309 | None:intergenic | 15.0% |
| !! | GTGAACCTATATATATATAT+AGG | + | chr1_4:1980466-1980485 | Msa0143070:intron | 20.0% |
| !! | AGTTCCCTATATATATATAT+AGG | - | chr1_4:1980474-1980493 | None:intergenic | 20.0% |
| !!! | TGATTAATATCATTCTTTTG+TGG | - | chr1_4:1981403-1981422 | None:intergenic | 20.0% |
| !!! | TGTGTTTTAGTATTAAGATA+TGG | + | chr1_4:1981911-1981930 | Msa0143070:intron | 20.0% |
| !!! | AAATTGATTTTGAACAAAGA+GGG | + | chr1_4:1982177-1982196 | Msa0143070:intron | 20.0% |
| !!! | ACTTTTGTTAATTGAGAAAA+TGG | - | chr1_4:1982355-1982374 | None:intergenic | 20.0% |
| !! | ATCATAAAAGTTCATGATTT+GGG | - | chr1_4:1982432-1982451 | None:intergenic | 20.0% |
| !! | TATCATAAAAGTTCATGATT+TGG | - | chr1_4:1982433-1982452 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | - | chr1_4:1982495-1982514 | None:intergenic | 20.0% |
| !!! | GTTTGTCTTTTTAATATTAG+TGG | - | chr1_4:1982611-1982630 | None:intergenic | 20.0% |
| !! | AAAGACAAACATTAAATAAG+GGG | + | chr1_4:1982621-1982640 | Msa0143070:intron | 20.0% |
| !! | TTTGATAAAATCATAACATG+GGG | - | chr1_4:1983289-1983308 | None:intergenic | 20.0% |
| !!! | CTTTTGATAAAATCATAACA+TGG | - | chr1_4:1983291-1983310 | None:intergenic | 20.0% |
| !! | GTGAACCTATATATATATAT+AGG | + | chr1_4:1980466-1980485 | Msa0143070:intron | 20.0% |
| !! | AGTTCCCTATATATATATAT+AGG | - | chr1_4:1980474-1980493 | None:intergenic | 20.0% |
| !!! | TGATTAATATCATTCTTTTG+TGG | - | chr1_4:1981403-1981422 | None:intergenic | 20.0% |
| !!! | TGTGTTTTAGTATTAAGATA+TGG | + | chr1_4:1981911-1981930 | Msa0143070:intron | 20.0% |
| !!! | AAATTGATTTTGAACAAAGA+GGG | + | chr1_4:1982177-1982196 | Msa0143070:intron | 20.0% |
| !!! | ACTTTTGTTAATTGAGAAAA+TGG | - | chr1_4:1982355-1982374 | None:intergenic | 20.0% |
| !! | ATCATAAAAGTTCATGATTT+GGG | - | chr1_4:1982432-1982451 | None:intergenic | 20.0% |
| !! | TATCATAAAAGTTCATGATT+TGG | - | chr1_4:1982433-1982452 | None:intergenic | 20.0% |
| !!! | TGGTTTTTCTTCTTATATTA+AGG | - | chr1_4:1982495-1982514 | None:intergenic | 20.0% |
| !!! | GTTTGTCTTTTTAATATTAG+TGG | - | chr1_4:1982611-1982630 | None:intergenic | 20.0% |
| !! | AAAGACAAACATTAAATAAG+GGG | + | chr1_4:1982621-1982640 | Msa0143070:intron | 20.0% |
| !! | TTTGATAAAATCATAACATG+GGG | - | chr1_4:1983289-1983308 | None:intergenic | 20.0% |
| !!! | CTTTTGATAAAATCATAACA+TGG | - | chr1_4:1983291-1983310 | None:intergenic | 20.0% |
| !! | TCTTTTCATTTGTAGATATG+AGG | - | chr1_4:1980239-1980258 | None:intergenic | 25.0% |
| ! | ATATATATAGGGAACTTCTA+CGG | + | chr1_4:1980478-1980497 | Msa0143070:intron | 25.0% |
| !!! | ACTCACAAATTTTAGTGTAT+CGG | + | chr1_4:1980504-1980523 | Msa0143070:intron | 25.0% |
| ! | ATGGTACATCCAATAAATTT+GGG | - | chr1_4:1980866-1980885 | None:intergenic | 25.0% |
| ! | TAGTTAAATGTCACTCTTTA+TGG | - | chr1_4:1981172-1981191 | None:intergenic | 25.0% |
| ! | CAAAACATTTAACATATCCT+CGG | - | chr1_4:1981218-1981237 | None:intergenic | 25.0% |
| !!! | AATTGATTTTGAACAAGAGA+GGG | - | chr1_4:1981729-1981748 | None:intergenic | 25.0% |
| !!! | AAATTGATTTTGAACAAGAG+AGG | - | chr1_4:1981730-1981749 | None:intergenic | 25.0% |
| ! | TACATTACACTATAGAATGA+GGG | - | chr1_4:1981850-1981869 | None:intergenic | 25.0% |
| !! | ATTTTGTTCATGTTTAGCTA+AGG | + | chr1_4:1981942-1981961 | Msa0143070:intron | 25.0% |
| !! | TTTTGTCTGTTGTTAATTAG+TGG | - | chr1_4:1982154-1982173 | None:intergenic | 25.0% |
| !!! | GAAATTGATTTTGAACAAAG+AGG | + | chr1_4:1982176-1982195 | Msa0143070:intron | 25.0% |
| ! | AATTCAGGATTTAGAGATTT+AGG | + | chr1_4:1982239-1982258 | Msa0143070:intron | 25.0% |
| ! | ATTCAGGATTTAGAGATTTA+GGG | + | chr1_4:1982240-1982259 | Msa0143070:intron | 25.0% |
| !! | ATGAACTTTTATGATAGCTA+GGG | + | chr1_4:1982437-1982456 | Msa0143070:intron | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | - | chr1_4:1982490-1982509 | None:intergenic | 25.0% |
| !!! | ATGCTTCACATTTTTTATGA+GGG | - | chr1_4:1982579-1982598 | None:intergenic | 25.0% |
| !!! | AATGCTTCACATTTTTTATG+AGG | - | chr1_4:1982580-1982599 | None:intergenic | 25.0% |
| ! | AATCTACTTATATATAGGAC+CGG | + | chr1_4:1982722-1982741 | Msa0143070:intron | 25.0% |
| !! | TGATGAGATTATGAATTTTG+CGG | - | chr1_4:1982842-1982861 | None:intergenic | 25.0% |
| !! | AGAAATCAAGATTTTGAATG+AGG | - | chr1_4:1983006-1983025 | None:intergenic | 25.0% |
| ! | GAAATTGAATTTAGGAAGAA+TGG | - | chr1_4:1983177-1983196 | None:intergenic | 25.0% |
| ! | AAACTATGATTCAACATAAG+AGG | - | chr1_4:1983252-1983271 | None:intergenic | 25.0% |
| ! | TCTTATGTTGAATCATAGTT+TGG | + | chr1_4:1983251-1983270 | Msa0143070:CDS | 25.0% |
| !!! | GGAATTGAATATTTTGAGAT+GGG | - | chr1_4:1983383-1983402 | None:intergenic | 25.0% |
| !!! | AGGAATTGAATATTTTGAGA+TGG | - | chr1_4:1983384-1983403 | None:intergenic | 25.0% |
| !! | AGAAAAACAATTTTGGATTC+AGG | - | chr1_4:1983423-1983442 | None:intergenic | 25.0% |
| !! | TCGAAACAGAAAAACAATTT+TGG | - | chr1_4:1983430-1983449 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTGTTTCGAAAT+TGG | + | chr1_4:1983433-1983452 | Msa0143070:CDS | 25.0% |
| !!! | ATAAGGAAAAACGTTTTTTC+AGG | - | chr1_4:1983531-1983550 | None:intergenic | 25.0% |
| ! | AGATTAATGCGTATAAGAAA+TGG | + | chr1_4:1983595-1983614 | Msa0143070:CDS | 25.0% |
| ! | GATTAATGCGTATAAGAAAT+GGG | + | chr1_4:1983596-1983615 | Msa0143070:CDS | 25.0% |
| ! | ATTAATGCGTATAAGAAATG+GGG | + | chr1_4:1983597-1983616 | Msa0143070:CDS | 25.0% |
| ! | TTGAAATTTCTTCAATCCAA+AGG | + | chr1_4:1983804-1983823 | Msa0143070:CDS | 25.0% |
| ! | AGATGTTTCAACTTTCAATA+AGG | + | chr1_4:1983950-1983969 | Msa0143070:CDS | 25.0% |
| !! | TCTTTTCATTTGTAGATATG+AGG | - | chr1_4:1980239-1980258 | None:intergenic | 25.0% |
| ! | ATATATATAGGGAACTTCTA+CGG | + | chr1_4:1980478-1980497 | Msa0143070:intron | 25.0% |
| !!! | ACTCACAAATTTTAGTGTAT+CGG | + | chr1_4:1980504-1980523 | Msa0143070:intron | 25.0% |
| ! | ATGGTACATCCAATAAATTT+GGG | - | chr1_4:1980866-1980885 | None:intergenic | 25.0% |
| ! | TAGTTAAATGTCACTCTTTA+TGG | - | chr1_4:1981172-1981191 | None:intergenic | 25.0% |
| ! | CAAAACATTTAACATATCCT+CGG | - | chr1_4:1981218-1981237 | None:intergenic | 25.0% |
| !!! | AATTGATTTTGAACAAGAGA+GGG | - | chr1_4:1981729-1981748 | None:intergenic | 25.0% |
| !!! | AAATTGATTTTGAACAAGAG+AGG | - | chr1_4:1981730-1981749 | None:intergenic | 25.0% |
| ! | TACATTACACTATAGAATGA+GGG | - | chr1_4:1981850-1981869 | None:intergenic | 25.0% |
| !! | ATTTTGTTCATGTTTAGCTA+AGG | + | chr1_4:1981942-1981961 | Msa0143070:intron | 25.0% |
| !! | TTTTGTCTGTTGTTAATTAG+TGG | - | chr1_4:1982154-1982173 | None:intergenic | 25.0% |
| !!! | GAAATTGATTTTGAACAAAG+AGG | + | chr1_4:1982176-1982195 | Msa0143070:intron | 25.0% |
| ! | AATTCAGGATTTAGAGATTT+AGG | + | chr1_4:1982239-1982258 | Msa0143070:intron | 25.0% |
| ! | ATTCAGGATTTAGAGATTTA+GGG | + | chr1_4:1982240-1982259 | Msa0143070:intron | 25.0% |
| !! | ATGAACTTTTATGATAGCTA+GGG | + | chr1_4:1982437-1982456 | Msa0143070:intron | 25.0% |
| ! | TTTCTTCTTATATTAAGGAC+CGG | - | chr1_4:1982490-1982509 | None:intergenic | 25.0% |
| !!! | ATGCTTCACATTTTTTATGA+GGG | - | chr1_4:1982579-1982598 | None:intergenic | 25.0% |
| !!! | AATGCTTCACATTTTTTATG+AGG | - | chr1_4:1982580-1982599 | None:intergenic | 25.0% |
| ! | AATCTACTTATATATAGGAC+CGG | + | chr1_4:1982722-1982741 | Msa0143070:intron | 25.0% |
| !! | TGATGAGATTATGAATTTTG+CGG | - | chr1_4:1982842-1982861 | None:intergenic | 25.0% |
| !! | AGAAATCAAGATTTTGAATG+AGG | - | chr1_4:1983006-1983025 | None:intergenic | 25.0% |
| ! | GAAATTGAATTTAGGAAGAA+TGG | - | chr1_4:1983177-1983196 | None:intergenic | 25.0% |
| ! | AAACTATGATTCAACATAAG+AGG | - | chr1_4:1983252-1983271 | None:intergenic | 25.0% |
| ! | TCTTATGTTGAATCATAGTT+TGG | + | chr1_4:1983251-1983270 | Msa0143070:CDS | 25.0% |
| !!! | GGAATTGAATATTTTGAGAT+GGG | - | chr1_4:1983383-1983402 | None:intergenic | 25.0% |
| !!! | AGGAATTGAATATTTTGAGA+TGG | - | chr1_4:1983384-1983403 | None:intergenic | 25.0% |
| !! | AGAAAAACAATTTTGGATTC+AGG | - | chr1_4:1983423-1983442 | None:intergenic | 25.0% |
| !! | TCGAAACAGAAAAACAATTT+TGG | - | chr1_4:1983430-1983449 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTGTTTCGAAAT+TGG | + | chr1_4:1983433-1983452 | Msa0143070:CDS | 25.0% |
| !!! | ATAAGGAAAAACGTTTTTTC+AGG | - | chr1_4:1983531-1983550 | None:intergenic | 25.0% |
| ! | AGATTAATGCGTATAAGAAA+TGG | + | chr1_4:1983595-1983614 | Msa0143070:CDS | 25.0% |
| ! | GATTAATGCGTATAAGAAAT+GGG | + | chr1_4:1983596-1983615 | Msa0143070:CDS | 25.0% |
| ! | ATTAATGCGTATAAGAAATG+GGG | + | chr1_4:1983597-1983616 | Msa0143070:CDS | 25.0% |
| ! | TTGAAATTTCTTCAATCCAA+AGG | + | chr1_4:1983804-1983823 | Msa0143070:CDS | 25.0% |
| ! | AGATGTTTCAACTTTCAATA+AGG | + | chr1_4:1983950-1983969 | Msa0143070:CDS | 25.0% |
| ! | TGCATTTATCGTCTTTTAAG+TGG | + | chr1_4:1980199-1980218 | Msa0143070:intron | 30.0% |
| !! | TTTTATTTCGTCGAAGCTTT+TGG | + | chr1_4:1980735-1980754 | Msa0143070:intron | 30.0% |
| TCCAATAAATTTGGGTGTAT+CGG | - | chr1_4:1980858-1980877 | None:intergenic | 30.0% | |
| CATGGTACATCCAATAAATT+TGG | - | chr1_4:1980867-1980886 | None:intergenic | 30.0% | |
| CAAATTTATTGGATGTACCA+TGG | + | chr1_4:1980865-1980884 | Msa0143070:intron | 30.0% | |
| TATATATATGGCGAATTCCA+TGG | - | chr1_4:1980885-1980904 | None:intergenic | 30.0% | |
| ! | ATGCAGACATTTTGTGTATT+GGG | - | chr1_4:1981111-1981130 | None:intergenic | 30.0% |
| ! | TATGCAGACATTTTGTGTAT+TGG | - | chr1_4:1981112-1981131 | None:intergenic | 30.0% |
| AACGATGTCAAATCAGAAAT+TGG | - | chr1_4:1981676-1981695 | None:intergenic | 30.0% | |
| ! | TGTTGTTGTTGTTAATTCTC+AGG | + | chr1_4:1981754-1981773 | Msa0143070:intron | 30.0% |
| CTACATTACACTATAGAATG+AGG | - | chr1_4:1981851-1981870 | None:intergenic | 30.0% | |
| TGTTTAGCTAAGGCAAAATT+TGG | + | chr1_4:1981952-1981971 | Msa0143070:intron | 30.0% | |
| ! | AGAGTTTAGTTTATATGGTG+TGG | - | chr1_4:1982073-1982092 | None:intergenic | 30.0% |
| TGTTAATTAGTGGAGATTTG+TGG | - | chr1_4:1982144-1982163 | None:intergenic | 30.0% | |
| AAGATTTGGGGATTAAATTC+AGG | + | chr1_4:1982224-1982243 | Msa0143070:intron | 30.0% | |
| TTCAGGATTTAGAGATTTAG+GGG | + | chr1_4:1982241-1982260 | Msa0143070:intron | 30.0% | |
| ! | CATGAACTTTTATGATAGCT+AGG | + | chr1_4:1982436-1982455 | Msa0143070:intron | 30.0% |
| ! | TGAACTTTTATGATAGCTAG+GGG | + | chr1_4:1982438-1982457 | Msa0143070:intron | 30.0% |
| !!! | GTGTACTGATTGATGTTTTT+TGG | - | chr1_4:1982515-1982534 | None:intergenic | 30.0% |
| TTGAAGAAGATGAAGAAAAG+AGG | - | chr1_4:1982924-1982943 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAAAA+GGG | - | chr1_4:1982947-1982966 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAGAAA+AGG | - | chr1_4:1982948-1982967 | None:intergenic | 30.0% | |
| ! | GACTGTGAAATGATGATTTT+GGG | - | chr1_4:1982978-1982997 | None:intergenic | 30.0% |
| ! | TGACTGTGAAATGATGATTT+TGG | - | chr1_4:1982979-1982998 | None:intergenic | 30.0% |
| GTTTGAATAGAGTGATAACT+GGG | - | chr1_4:1983120-1983139 | None:intergenic | 30.0% | |
| !!! | TTAGGAAGAATGGTTTTGTT+GGG | - | chr1_4:1983167-1983186 | None:intergenic | 30.0% |
| !!! | TTTAGGAAGAATGGTTTTGT+TGG | - | chr1_4:1983168-1983187 | None:intergenic | 30.0% |
| GAGAGAAGGAAATTGAATTT+AGG | - | chr1_4:1983185-1983204 | None:intergenic | 30.0% | |
| AATTCAATTTCCTTCTCTCA+AGG | + | chr1_4:1983186-1983205 | Msa0143070:intron | 30.0% | |
| ATTCAATTTCCTTCTCTCAA+GGG | + | chr1_4:1983187-1983206 | Msa0143070:intron | 30.0% | |
| ! | GAGATGGGAATTTAGAATAA+AGG | - | chr1_4:1983368-1983387 | None:intergenic | 30.0% |
| ATTCAATTCCTGCTTCAAAA+TGG | + | chr1_4:1983393-1983412 | Msa0143070:CDS | 30.0% | |
| GTGTTGGAAGTAAAACAATT+AGG | + | chr1_4:1983498-1983517 | Msa0143070:CDS | 30.0% | |
| ATTAATCTTCCTTTCCCATA+CGG | - | chr1_4:1983583-1983602 | None:intergenic | 30.0% | |
| !!! | CAGTTTTTTGTCAATCACAT+GGG | + | chr1_4:1983705-1983724 | Msa0143070:CDS | 30.0% |
| TTATGGTGAGTTTAGAGAAA+AGG | + | chr1_4:1983766-1983785 | Msa0143070:CDS | 30.0% | |
| TATGGTGAGTTTAGAGAAAA+GGG | + | chr1_4:1983767-1983786 | Msa0143070:CDS | 30.0% | |
| TGAAGAAATTTCAAAACCCT+TGG | - | chr1_4:1983798-1983817 | None:intergenic | 30.0% | |
| TCAATCCAAAGGTTTGATTA+AGG | + | chr1_4:1983815-1983834 | Msa0143070:CDS | 30.0% | |
| TTTGATTAAGGATGCTAAGT+TGG | + | chr1_4:1983827-1983846 | Msa0143070:CDS | 30.0% | |
| ! | TGCATTTATCGTCTTTTAAG+TGG | + | chr1_4:1980199-1980218 | Msa0143070:intron | 30.0% |
| !! | TTTTATTTCGTCGAAGCTTT+TGG | + | chr1_4:1980735-1980754 | Msa0143070:intron | 30.0% |
| TCCAATAAATTTGGGTGTAT+CGG | - | chr1_4:1980858-1980877 | None:intergenic | 30.0% | |
| CATGGTACATCCAATAAATT+TGG | - | chr1_4:1980867-1980886 | None:intergenic | 30.0% | |
| CAAATTTATTGGATGTACCA+TGG | + | chr1_4:1980865-1980884 | Msa0143070:intron | 30.0% | |
| TATATATATGGCGAATTCCA+TGG | - | chr1_4:1980885-1980904 | None:intergenic | 30.0% | |
| ! | ATGCAGACATTTTGTGTATT+GGG | - | chr1_4:1981111-1981130 | None:intergenic | 30.0% |
| ! | TATGCAGACATTTTGTGTAT+TGG | - | chr1_4:1981112-1981131 | None:intergenic | 30.0% |
| AACGATGTCAAATCAGAAAT+TGG | - | chr1_4:1981676-1981695 | None:intergenic | 30.0% | |
| ! | TGTTGTTGTTGTTAATTCTC+AGG | + | chr1_4:1981754-1981773 | Msa0143070:intron | 30.0% |
| CTACATTACACTATAGAATG+AGG | - | chr1_4:1981851-1981870 | None:intergenic | 30.0% | |
| TGTTTAGCTAAGGCAAAATT+TGG | + | chr1_4:1981952-1981971 | Msa0143070:intron | 30.0% | |
| ! | AGAGTTTAGTTTATATGGTG+TGG | - | chr1_4:1982073-1982092 | None:intergenic | 30.0% |
| TGTTAATTAGTGGAGATTTG+TGG | - | chr1_4:1982144-1982163 | None:intergenic | 30.0% | |
| AAGATTTGGGGATTAAATTC+AGG | + | chr1_4:1982224-1982243 | Msa0143070:intron | 30.0% | |
| TTCAGGATTTAGAGATTTAG+GGG | + | chr1_4:1982241-1982260 | Msa0143070:intron | 30.0% | |
| ! | CATGAACTTTTATGATAGCT+AGG | + | chr1_4:1982436-1982455 | Msa0143070:intron | 30.0% |
| ! | TGAACTTTTATGATAGCTAG+GGG | + | chr1_4:1982438-1982457 | Msa0143070:intron | 30.0% |
| !!! | GTGTACTGATTGATGTTTTT+TGG | - | chr1_4:1982515-1982534 | None:intergenic | 30.0% |
| TTGAAGAAGATGAAGAAAAG+AGG | - | chr1_4:1982924-1982943 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAGAAGAAAA+GGG | - | chr1_4:1982947-1982966 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAGAAA+AGG | - | chr1_4:1982948-1982967 | None:intergenic | 30.0% | |
| ! | GACTGTGAAATGATGATTTT+GGG | - | chr1_4:1982978-1982997 | None:intergenic | 30.0% |
| ! | TGACTGTGAAATGATGATTT+TGG | - | chr1_4:1982979-1982998 | None:intergenic | 30.0% |
| GTTTGAATAGAGTGATAACT+GGG | - | chr1_4:1983120-1983139 | None:intergenic | 30.0% | |
| !!! | TTAGGAAGAATGGTTTTGTT+GGG | - | chr1_4:1983167-1983186 | None:intergenic | 30.0% |
| !!! | TTTAGGAAGAATGGTTTTGT+TGG | - | chr1_4:1983168-1983187 | None:intergenic | 30.0% |
| GAGAGAAGGAAATTGAATTT+AGG | - | chr1_4:1983185-1983204 | None:intergenic | 30.0% | |
| AATTCAATTTCCTTCTCTCA+AGG | + | chr1_4:1983186-1983205 | Msa0143070:intron | 30.0% | |
| ATTCAATTTCCTTCTCTCAA+GGG | + | chr1_4:1983187-1983206 | Msa0143070:intron | 30.0% | |
| ! | GAGATGGGAATTTAGAATAA+AGG | - | chr1_4:1983368-1983387 | None:intergenic | 30.0% |
| ATTCAATTCCTGCTTCAAAA+TGG | + | chr1_4:1983393-1983412 | Msa0143070:CDS | 30.0% | |
| GTGTTGGAAGTAAAACAATT+AGG | + | chr1_4:1983498-1983517 | Msa0143070:CDS | 30.0% | |
| ATTAATCTTCCTTTCCCATA+CGG | - | chr1_4:1983583-1983602 | None:intergenic | 30.0% | |
| !!! | CAGTTTTTTGTCAATCACAT+GGG | + | chr1_4:1983705-1983724 | Msa0143070:CDS | 30.0% |
| TTATGGTGAGTTTAGAGAAA+AGG | + | chr1_4:1983766-1983785 | Msa0143070:CDS | 30.0% | |
| TATGGTGAGTTTAGAGAAAA+GGG | + | chr1_4:1983767-1983786 | Msa0143070:CDS | 30.0% | |
| TGAAGAAATTTCAAAACCCT+TGG | - | chr1_4:1983798-1983817 | None:intergenic | 30.0% | |
| TCAATCCAAAGGTTTGATTA+AGG | + | chr1_4:1983815-1983834 | Msa0143070:CDS | 30.0% | |
| TTTGATTAAGGATGCTAAGT+TGG | + | chr1_4:1983827-1983846 | Msa0143070:CDS | 30.0% | |
| CTGAAGGAACAACAAGTTTA+AGG | - | chr1_4:1980120-1980139 | None:intergenic | 35.0% | |
| CAAAGCGAATCTGATTTCAT+TGG | - | chr1_4:1980269-1980288 | None:intergenic | 35.0% | |
| AACGTCTACTCAAAGACATA+TGG | - | chr1_4:1980430-1980449 | None:intergenic | 35.0% | |
| TAGGTTCACCATAAGTGAAT+TGG | - | chr1_4:1980455-1980474 | None:intergenic | 35.0% | |
| ACCGATACACCCAAATTTAT+TGG | + | chr1_4:1980854-1980873 | Msa0143070:intron | 35.0% | |
| TCATTCTCATTATCCACACA+AGG | + | chr1_4:1980981-1981000 | Msa0143070:intron | 35.0% | |
| TGTGTGGATAATGAGAATGA+CGG | - | chr1_4:1980981-1981000 | None:intergenic | 35.0% | |
| TCATTCTCATTATCCACACA+AGG | + | chr1_4:1980981-1981000 | Msa0143070:intron | 35.0% | |
| GTCTGCATATGATACAATAG+TGG | + | chr1_4:1981123-1981142 | Msa0143070:intron | 35.0% | |
| TTTCCTTGACAAGTACACTA+AGG | + | chr1_4:1981323-1981342 | Msa0143070:intron | 35.0% | |
| TATCCTTAGTGTACTTGTCA+AGG | - | chr1_4:1981329-1981348 | None:intergenic | 35.0% | |
| CCTTGACATTCAACTAAAGT+TGG | - | chr1_4:1981446-1981465 | None:intergenic | 35.0% | |
| CCAACTTTAGTTGAATGTCA+AGG | + | chr1_4:1981443-1981462 | Msa0143070:intron | 35.0% | |
| AATCAATCTCATTCTTAGCG+TGG | + | chr1_4:1981641-1981660 | Msa0143070:intron | 35.0% | |
| TCATTCTTAGCGTGGATATT+TGG | + | chr1_4:1981649-1981668 | Msa0143070:intron | 35.0% | |
| TTAGCTAAGGCAAAATTTGG+AGG | + | chr1_4:1981955-1981974 | Msa0143070:intron | 35.0% | |
| TAGCTAAGGCAAAATTTGGA+GGG | + | chr1_4:1981956-1981975 | Msa0143070:intron | 35.0% | |
| ACAAAAGTTCTTAACGTCAG+AGG | + | chr1_4:1982367-1982386 | Msa0143070:intron | 35.0% | |
| TACTTATATATAGGACCGGA+GGG | + | chr1_4:1982726-1982745 | Msa0143070:intron | 35.0% | |
| !! | TGTTGTGGTGTTTTGAATCT+GGG | - | chr1_4:1982894-1982913 | None:intergenic | 35.0% |
| AGATGAAGAAAAGAGGAAGA+AGG | - | chr1_4:1982917-1982936 | None:intergenic | 35.0% | |
| CATGGGATTTGAATAATGAG+AGG | - | chr1_4:1983085-1983104 | None:intergenic | 35.0% | |
| CTCTCATTATTCAAATCCCA+TGG | + | chr1_4:1983083-1983102 | Msa0143070:CDS | 35.0% | |
| GGTTTGAATAGAGTGATAAC+TGG | - | chr1_4:1983121-1983140 | None:intergenic | 35.0% | |
| GATTCAACATAAGAGGTTTC+TGG | - | chr1_4:1983245-1983264 | None:intergenic | 35.0% | |
| ! | AGATTAGTCCAAAATCCGTA+TGG | + | chr1_4:1983565-1983584 | Msa0143070:CDS | 35.0% |
| ! | GATTAGTCCAAAATCCGTAT+GGG | + | chr1_4:1983566-1983585 | Msa0143070:CDS | 35.0% |
| TGGATACTTCAAAAATGCTG+AGG | - | chr1_4:1983643-1983662 | None:intergenic | 35.0% | |
| !!! | CAGCATTTTTGAAGTATCCA+TGG | + | chr1_4:1983643-1983662 | Msa0143070:CDS | 35.0% |
| !!! | GCAGTTTTTTGTCAATCACA+TGG | + | chr1_4:1983704-1983723 | Msa0143070:CDS | 35.0% |
| ! | TTTTTGTCAATCACATGGGT+TGG | + | chr1_4:1983709-1983728 | Msa0143070:CDS | 35.0% |
| ! | TTTTGTCAATCACATGGGTT+GGG | + | chr1_4:1983710-1983729 | Msa0143070:CDS | 35.0% |
| AAACTCACCATAACAAGCAT+CGG | - | chr1_4:1983759-1983778 | None:intergenic | 35.0% | |
| TAGAGAAAAGGGTTATTCCA+AGG | + | chr1_4:1983778-1983797 | Msa0143070:CDS | 35.0% | |
| AGAGAAAAGGGTTATTCCAA+GGG | + | chr1_4:1983779-1983798 | Msa0143070:CDS | 35.0% | |
| AGCATCCTTAATCAAACCTT+TGG | - | chr1_4:1983823-1983842 | None:intergenic | 35.0% | |
| AATCTTCAAAGCAACGCAAA+GGG | + | chr1_4:1983985-1984004 | Msa0143070:CDS | 35.0% | |
| CTGAAGGAACAACAAGTTTA+AGG | - | chr1_4:1980120-1980139 | None:intergenic | 35.0% | |
| CAAAGCGAATCTGATTTCAT+TGG | - | chr1_4:1980269-1980288 | None:intergenic | 35.0% | |
| AACGTCTACTCAAAGACATA+TGG | - | chr1_4:1980430-1980449 | None:intergenic | 35.0% | |
| TAGGTTCACCATAAGTGAAT+TGG | - | chr1_4:1980455-1980474 | None:intergenic | 35.0% | |
| ACCGATACACCCAAATTTAT+TGG | + | chr1_4:1980854-1980873 | Msa0143070:intron | 35.0% | |
| TCATTCTCATTATCCACACA+AGG | + | chr1_4:1980981-1981000 | Msa0143070:intron | 35.0% | |
| TGTGTGGATAATGAGAATGA+CGG | - | chr1_4:1980981-1981000 | None:intergenic | 35.0% | |
| TCATTCTCATTATCCACACA+AGG | + | chr1_4:1980981-1981000 | Msa0143070:intron | 35.0% | |
| GTCTGCATATGATACAATAG+TGG | + | chr1_4:1981123-1981142 | Msa0143070:intron | 35.0% | |
| TTTCCTTGACAAGTACACTA+AGG | + | chr1_4:1981323-1981342 | Msa0143070:intron | 35.0% | |
| TATCCTTAGTGTACTTGTCA+AGG | - | chr1_4:1981329-1981348 | None:intergenic | 35.0% | |
| CCTTGACATTCAACTAAAGT+TGG | - | chr1_4:1981446-1981465 | None:intergenic | 35.0% | |
| CCAACTTTAGTTGAATGTCA+AGG | + | chr1_4:1981443-1981462 | Msa0143070:intron | 35.0% | |
| AATCAATCTCATTCTTAGCG+TGG | + | chr1_4:1981641-1981660 | Msa0143070:intron | 35.0% | |
| TCATTCTTAGCGTGGATATT+TGG | + | chr1_4:1981649-1981668 | Msa0143070:intron | 35.0% | |
| TTAGCTAAGGCAAAATTTGG+AGG | + | chr1_4:1981955-1981974 | Msa0143070:intron | 35.0% | |
| TAGCTAAGGCAAAATTTGGA+GGG | + | chr1_4:1981956-1981975 | Msa0143070:intron | 35.0% | |
| ACAAAAGTTCTTAACGTCAG+AGG | + | chr1_4:1982367-1982386 | Msa0143070:intron | 35.0% | |
| TACTTATATATAGGACCGGA+GGG | + | chr1_4:1982726-1982745 | Msa0143070:intron | 35.0% | |
| !! | TGTTGTGGTGTTTTGAATCT+GGG | - | chr1_4:1982894-1982913 | None:intergenic | 35.0% |
| AGATGAAGAAAAGAGGAAGA+AGG | - | chr1_4:1982917-1982936 | None:intergenic | 35.0% | |
| CATGGGATTTGAATAATGAG+AGG | - | chr1_4:1983085-1983104 | None:intergenic | 35.0% | |
| CTCTCATTATTCAAATCCCA+TGG | + | chr1_4:1983083-1983102 | Msa0143070:CDS | 35.0% | |
| GGTTTGAATAGAGTGATAAC+TGG | - | chr1_4:1983121-1983140 | None:intergenic | 35.0% | |
| GATTCAACATAAGAGGTTTC+TGG | - | chr1_4:1983245-1983264 | None:intergenic | 35.0% | |
| ! | AGATTAGTCCAAAATCCGTA+TGG | + | chr1_4:1983565-1983584 | Msa0143070:CDS | 35.0% |
| ! | GATTAGTCCAAAATCCGTAT+GGG | + | chr1_4:1983566-1983585 | Msa0143070:CDS | 35.0% |
| TGGATACTTCAAAAATGCTG+AGG | - | chr1_4:1983643-1983662 | None:intergenic | 35.0% | |
| !!! | CAGCATTTTTGAAGTATCCA+TGG | + | chr1_4:1983643-1983662 | Msa0143070:CDS | 35.0% |
| !!! | GCAGTTTTTTGTCAATCACA+TGG | + | chr1_4:1983704-1983723 | Msa0143070:CDS | 35.0% |
| ! | TTTTTGTCAATCACATGGGT+TGG | + | chr1_4:1983709-1983728 | Msa0143070:CDS | 35.0% |
| ! | TTTTGTCAATCACATGGGTT+GGG | + | chr1_4:1983710-1983729 | Msa0143070:CDS | 35.0% |
| AAACTCACCATAACAAGCAT+CGG | - | chr1_4:1983759-1983778 | None:intergenic | 35.0% | |
| TAGAGAAAAGGGTTATTCCA+AGG | + | chr1_4:1983778-1983797 | Msa0143070:CDS | 35.0% | |
| AGAGAAAAGGGTTATTCCAA+GGG | + | chr1_4:1983779-1983798 | Msa0143070:CDS | 35.0% | |
| AGCATCCTTAATCAAACCTT+TGG | - | chr1_4:1983823-1983842 | None:intergenic | 35.0% | |
| AATCTTCAAAGCAACGCAAA+GGG | + | chr1_4:1983985-1984004 | Msa0143070:CDS | 35.0% | |
| GACGTTTGCCAATTCACTTA+TGG | + | chr1_4:1980444-1980463 | Msa0143070:intron | 40.0% | |
| ATCCACACAAGGATCAAGTT+AGG | + | chr1_4:1980992-1981011 | Msa0143070:intron | 40.0% | |
| ATCCACACAAGGATCAAGTT+AGG | + | chr1_4:1980992-1981011 | Msa0143070:intron | 40.0% | |
| ATTCCAATCAAGGACAAGGA+CGG | - | chr1_4:1981057-1981076 | None:intergenic | 40.0% | |
| TGCAATTCCAATCAAGGACA+AGG | - | chr1_4:1981061-1981080 | None:intergenic | 40.0% | |
| AGACGAGGTTTAGGAATTTG+AGG | - | chr1_4:1981702-1981721 | None:intergenic | 40.0% | |
| GTGGAGATTTGTGGTAAGAA+AGG | - | chr1_4:1982135-1982154 | None:intergenic | 40.0% | |
| ! | GGGGTTTGAGATACAATTTG+AGG | + | chr1_4:1982260-1982279 | Msa0143070:intron | 40.0% |
| CTTAACGTCAGAGGACTAAA+TGG | + | chr1_4:1982376-1982395 | Msa0143070:intron | 40.0% | |
| AGTGATCAAAACTACTCCTC+CGG | + | chr1_4:1982468-1982487 | Msa0143070:intron | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | - | chr1_4:1982487-1982506 | None:intergenic | 40.0% | |
| CTACTTATATATAGGACCGG+AGG | + | chr1_4:1982725-1982744 | Msa0143070:intron | 40.0% | |
| !! | GTGTTGTGGTGTTTTGAATC+TGG | - | chr1_4:1982895-1982914 | None:intergenic | 40.0% |
| !! | AAAAGAGGAAGAAGGTGTTG+TGG | - | chr1_4:1982909-1982928 | None:intergenic | 40.0% |
| ATGAAGTCGTTTGGAGAGTT+TGG | - | chr1_4:1983044-1983063 | None:intergenic | 40.0% | |
| CTGGGAATTTGAAAAGCCAT+GGG | - | chr1_4:1983102-1983121 | None:intergenic | 40.0% | |
| ACTGGGAATTTGAAAAGCCA+TGG | - | chr1_4:1983103-1983122 | None:intergenic | 40.0% | |
| ! | TTCTGGTGATGATGTGAACA+AGG | - | chr1_4:1983228-1983247 | None:intergenic | 40.0% |
| GAAACCTGCAGTATTTGAGA+AGG | + | chr1_4:1983473-1983492 | Msa0143070:CDS | 40.0% | |
| AGTATTTGAGAAGGCAGTGT+TGG | + | chr1_4:1983482-1983501 | Msa0143070:CDS | 40.0% | |
| TCTTAGCATGTAGTGCGATA+AGG | - | chr1_4:1983548-1983567 | None:intergenic | 40.0% | |
| ! | TTCCTTTCCCATACGGATTT+TGG | - | chr1_4:1983576-1983595 | None:intergenic | 40.0% |
| ATGCGTATAAGAAATGGGGT+TGG | + | chr1_4:1983601-1983620 | Msa0143070:CDS | 40.0% | |
| ! | GAAGTATCCATGGTGTATGT+TGG | + | chr1_4:1983653-1983672 | Msa0143070:CDS | 40.0% |
| !! | CATAACAAGCATCGGATGTT+TGG | - | chr1_4:1983751-1983770 | None:intergenic | 40.0% |
| ! | CAAACATCCGATGCTTGTTA+TGG | + | chr1_4:1983749-1983768 | Msa0143070:CDS | 40.0% |
| ACATCCTCAGAGACTTTGAA+AGG | - | chr1_4:1983858-1983877 | None:intergenic | 40.0% | |
| GAGATTTGTGAATTGCTTCG+AGG | + | chr1_4:1983887-1983906 | Msa0143070:CDS | 40.0% | |
| CAATCTTCAAAGCAACGCAA+AGG | + | chr1_4:1983984-1984003 | Msa0143070:CDS | 40.0% | |
| GACGTTTGCCAATTCACTTA+TGG | + | chr1_4:1980444-1980463 | Msa0143070:intron | 40.0% | |
| ATCCACACAAGGATCAAGTT+AGG | + | chr1_4:1980992-1981011 | Msa0143070:intron | 40.0% | |
| ATCCACACAAGGATCAAGTT+AGG | + | chr1_4:1980992-1981011 | Msa0143070:intron | 40.0% | |
| ATTCCAATCAAGGACAAGGA+CGG | - | chr1_4:1981057-1981076 | None:intergenic | 40.0% | |
| TGCAATTCCAATCAAGGACA+AGG | - | chr1_4:1981061-1981080 | None:intergenic | 40.0% | |
| AGACGAGGTTTAGGAATTTG+AGG | - | chr1_4:1981702-1981721 | None:intergenic | 40.0% | |
| GTGGAGATTTGTGGTAAGAA+AGG | - | chr1_4:1982135-1982154 | None:intergenic | 40.0% | |
| ! | GGGGTTTGAGATACAATTTG+AGG | + | chr1_4:1982260-1982279 | Msa0143070:intron | 40.0% |
| CTTAACGTCAGAGGACTAAA+TGG | + | chr1_4:1982376-1982395 | Msa0143070:intron | 40.0% | |
| AGTGATCAAAACTACTCCTC+CGG | + | chr1_4:1982468-1982487 | Msa0143070:intron | 40.0% | |
| CTTCTTATATTAAGGACCGG+AGG | - | chr1_4:1982487-1982506 | None:intergenic | 40.0% | |
| CTACTTATATATAGGACCGG+AGG | + | chr1_4:1982725-1982744 | Msa0143070:intron | 40.0% | |
| !! | GTGTTGTGGTGTTTTGAATC+TGG | - | chr1_4:1982895-1982914 | None:intergenic | 40.0% |
| !! | AAAAGAGGAAGAAGGTGTTG+TGG | - | chr1_4:1982909-1982928 | None:intergenic | 40.0% |
| ATGAAGTCGTTTGGAGAGTT+TGG | - | chr1_4:1983044-1983063 | None:intergenic | 40.0% | |
| CTGGGAATTTGAAAAGCCAT+GGG | - | chr1_4:1983102-1983121 | None:intergenic | 40.0% | |
| ACTGGGAATTTGAAAAGCCA+TGG | - | chr1_4:1983103-1983122 | None:intergenic | 40.0% | |
| ! | TTCTGGTGATGATGTGAACA+AGG | - | chr1_4:1983228-1983247 | None:intergenic | 40.0% |
| GAAACCTGCAGTATTTGAGA+AGG | + | chr1_4:1983473-1983492 | Msa0143070:CDS | 40.0% | |
| AGTATTTGAGAAGGCAGTGT+TGG | + | chr1_4:1983482-1983501 | Msa0143070:CDS | 40.0% | |
| TCTTAGCATGTAGTGCGATA+AGG | - | chr1_4:1983548-1983567 | None:intergenic | 40.0% | |
| ! | TTCCTTTCCCATACGGATTT+TGG | - | chr1_4:1983576-1983595 | None:intergenic | 40.0% |
| ATGCGTATAAGAAATGGGGT+TGG | + | chr1_4:1983601-1983620 | Msa0143070:CDS | 40.0% | |
| ! | GAAGTATCCATGGTGTATGT+TGG | + | chr1_4:1983653-1983672 | Msa0143070:CDS | 40.0% |
| !! | CATAACAAGCATCGGATGTT+TGG | - | chr1_4:1983751-1983770 | None:intergenic | 40.0% |
| ! | CAAACATCCGATGCTTGTTA+TGG | + | chr1_4:1983749-1983768 | Msa0143070:CDS | 40.0% |
| ACATCCTCAGAGACTTTGAA+AGG | - | chr1_4:1983858-1983877 | None:intergenic | 40.0% | |
| GAGATTTGTGAATTGCTTCG+AGG | + | chr1_4:1983887-1983906 | Msa0143070:CDS | 40.0% | |
| CAATCTTCAAAGCAACGCAA+AGG | + | chr1_4:1983984-1984003 | Msa0143070:CDS | 40.0% | |
| GTCCTAACTTGATCCTTGTG+TGG | - | chr1_4:1980997-1981016 | None:intergenic | 45.0% | |
| GTCCTAACTTGATCCTTGTG+TGG | - | chr1_4:1980997-1981016 | None:intergenic | 45.0% | |
| CATCGGTGCAATTCCAATCA+AGG | - | chr1_4:1981067-1981086 | None:intergenic | 45.0% | |
| ! | GGAATTGCACCGATGTTGAT+AGG | + | chr1_4:1981072-1981091 | Msa0143070:intron | 45.0% |
| ! | ATTGCACCGATGTTGATAGG+TGG | + | chr1_4:1981075-1981094 | Msa0143070:intron | 45.0% |
| AGCCTACCACCTATCAACAT+CGG | - | chr1_4:1981084-1981103 | None:intergenic | 45.0% | |
| ! | TTTAGGTGCTACGTAAACCG+AGG | + | chr1_4:1981198-1981217 | Msa0143070:intron | 45.0% |
| ACTTGCAGAGCAACACACAA+CGG | + | chr1_4:1982753-1982772 | Msa0143070:intron | 45.0% | |
| GAGAGTTTGGAAGCTGTTTG+TGG | - | chr1_4:1983031-1983050 | None:intergenic | 45.0% | |
| GTCGTTGAGATGAAGTCGTT+TGG | - | chr1_4:1983053-1983072 | None:intergenic | 45.0% | |
| GGATCAAAGAGAGAAGACGA+GGG | - | chr1_4:1983146-1983165 | None:intergenic | 45.0% | |
| !! | TTAGAAGCACCCTTGAGAGA+AGG | - | chr1_4:1983199-1983218 | None:intergenic | 45.0% |
| GCAATGTTTGAGAGCTGCAA+TGG | - | chr1_4:1983337-1983356 | None:intergenic | 45.0% | |
| !!! | CAGGAACACCATTTTGAAGC+AGG | - | chr1_4:1983404-1983423 | None:intergenic | 45.0% |
| ACTGCCTTCTCAAATACTGC+AGG | - | chr1_4:1983480-1983499 | None:intergenic | 45.0% | |
| GTCCAAAATCCGTATGGGAA+AGG | + | chr1_4:1983571-1983590 | Msa0143070:CDS | 45.0% | |
| ACAGATGCCAACATACACCA+TGG | - | chr1_4:1983663-1983682 | None:intergenic | 45.0% | |
| ATGGTGTATGTTGGCATCTG+TGG | + | chr1_4:1983662-1983681 | Msa0143070:CDS | 45.0% | |
| TGCACCTTTCAAAGTCTCTG+AGG | + | chr1_4:1983851-1983870 | Msa0143070:CDS | 45.0% | |
| GTCCTAACTTGATCCTTGTG+TGG | - | chr1_4:1980997-1981016 | None:intergenic | 45.0% | |
| GTCCTAACTTGATCCTTGTG+TGG | - | chr1_4:1980997-1981016 | None:intergenic | 45.0% | |
| CATCGGTGCAATTCCAATCA+AGG | - | chr1_4:1981067-1981086 | None:intergenic | 45.0% | |
| ! | GGAATTGCACCGATGTTGAT+AGG | + | chr1_4:1981072-1981091 | Msa0143070:intron | 45.0% |
| ! | ATTGCACCGATGTTGATAGG+TGG | + | chr1_4:1981075-1981094 | Msa0143070:intron | 45.0% |
| AGCCTACCACCTATCAACAT+CGG | - | chr1_4:1981084-1981103 | None:intergenic | 45.0% | |
| ! | TTTAGGTGCTACGTAAACCG+AGG | + | chr1_4:1981198-1981217 | Msa0143070:intron | 45.0% |
| ACTTGCAGAGCAACACACAA+CGG | + | chr1_4:1982753-1982772 | Msa0143070:intron | 45.0% | |
| GAGAGTTTGGAAGCTGTTTG+TGG | - | chr1_4:1983031-1983050 | None:intergenic | 45.0% | |
| GTCGTTGAGATGAAGTCGTT+TGG | - | chr1_4:1983053-1983072 | None:intergenic | 45.0% | |
| GGATCAAAGAGAGAAGACGA+GGG | - | chr1_4:1983146-1983165 | None:intergenic | 45.0% | |
| !! | TTAGAAGCACCCTTGAGAGA+AGG | - | chr1_4:1983199-1983218 | None:intergenic | 45.0% |
| GCAATGTTTGAGAGCTGCAA+TGG | - | chr1_4:1983337-1983356 | None:intergenic | 45.0% | |
| !!! | CAGGAACACCATTTTGAAGC+AGG | - | chr1_4:1983404-1983423 | None:intergenic | 45.0% |
| ACTGCCTTCTCAAATACTGC+AGG | - | chr1_4:1983480-1983499 | None:intergenic | 45.0% | |
| GTCCAAAATCCGTATGGGAA+AGG | + | chr1_4:1983571-1983590 | Msa0143070:CDS | 45.0% | |
| ACAGATGCCAACATACACCA+TGG | - | chr1_4:1983663-1983682 | None:intergenic | 45.0% | |
| ATGGTGTATGTTGGCATCTG+TGG | + | chr1_4:1983662-1983681 | Msa0143070:CDS | 45.0% | |
| TGCACCTTTCAAAGTCTCTG+AGG | + | chr1_4:1983851-1983870 | Msa0143070:CDS | 45.0% | |
| TTCCTTCAGCTCTCATGCTC+TGG | + | chr1_4:1980131-1980150 | Msa0143070:CDS | 50.0% | |
| TACCAGAGCATGAGAGCTGA+AGG | - | chr1_4:1980136-1980155 | None:intergenic | 50.0% | |
| ! | CACCGATGTTGATAGGTGGT+AGG | + | chr1_4:1981079-1981098 | Msa0143070:intron | 50.0% |
| GAGGGAATCAGACGAGGTTT+AGG | - | chr1_4:1981711-1981730 | None:intergenic | 50.0% | |
| ACAAGAGAGGGAATCAGACG+AGG | - | chr1_4:1981717-1981736 | None:intergenic | 50.0% | |
| CAAAGAGAGAAGACGAGGGT+AGG | - | chr1_4:1983142-1983161 | None:intergenic | 50.0% | |
| GGGATCAAAGAGAGAAGACG+AGG | - | chr1_4:1983147-1983166 | None:intergenic | 50.0% | |
| TTCCTTCAGCTCTCATGCTC+TGG | + | chr1_4:1980131-1980150 | Msa0143070:CDS | 50.0% | |
| TACCAGAGCATGAGAGCTGA+AGG | - | chr1_4:1980136-1980155 | None:intergenic | 50.0% | |
| ! | CACCGATGTTGATAGGTGGT+AGG | + | chr1_4:1981079-1981098 | Msa0143070:intron | 50.0% |
| GAGGGAATCAGACGAGGTTT+AGG | - | chr1_4:1981711-1981730 | None:intergenic | 50.0% | |
| ACAAGAGAGGGAATCAGACG+AGG | - | chr1_4:1981717-1981736 | None:intergenic | 50.0% | |
| CAAAGAGAGAAGACGAGGGT+AGG | - | chr1_4:1983142-1983161 | None:intergenic | 50.0% | |
| GGGATCAAAGAGAGAAGACG+AGG | - | chr1_4:1983147-1983166 | None:intergenic | 50.0% | |
| GGACCGTCCTTGTCCTTGAT+TGG | + | chr1_4:1981051-1981070 | Msa0143070:intron | 55.0% | |
| GCTCTGCAAGTTACTCCCTC+CGG | - | chr1_4:1982744-1982763 | None:intergenic | 55.0% | |
| GGACCGTCCTTGTCCTTGAT+TGG | + | chr1_4:1981051-1981070 | Msa0143070:intron | 55.0% | |
| GCTCTGCAAGTTACTCCCTC+CGG | - | chr1_4:1982744-1982763 | None:intergenic | 55.0% | |
| GCAACACACAACGGCGCAAC+TGG | + | chr1_4:1982762-1982781 | Msa0143070:intron | 60.0% | |
| GCAACACACAACGGCGCAAC+TGG | + | chr1_4:1982762-1982781 | Msa0143070:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1980073 | 1984040 | 1980073 | ID=Msa0143070;Name=Msa0143070 |
| chr1_4 | mRNA | 1980073 | 1984040 | 1980073 | ID=Msa0143070-mRNA-1;Parent=Msa0143070;Name=Msa0143070-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0|0|0.5|1|1|4|0|376 |
| chr1_4 | exon | 1980073 | 1980152 | 1980073 | ID=Msa0143070-mRNA-1:exon:711;Parent=Msa0143070-mRNA-1 |
| chr1_4 | exon | 1981776 | 1981794 | 1981776 | ID=Msa0143070-mRNA-1:exon:712;Parent=Msa0143070-mRNA-1 |
| chr1_4 | exon | 1982884 | 1983120 | 1982884 | ID=Msa0143070-mRNA-1:exon:713;Parent=Msa0143070-mRNA-1 |
| chr1_4 | exon | 1983246 | 1984040 | 1983246 | ID=Msa0143070-mRNA-1:exon:714;Parent=Msa0143070-mRNA-1 |
| chr1_4 | CDS | 1980073 | 1980152 | 1980073 | ID=Msa0143070-mRNA-1:cds;Parent=Msa0143070-mRNA-1 |
| chr1_4 | CDS | 1981776 | 1981794 | 1981776 | ID=Msa0143070-mRNA-1:cds;Parent=Msa0143070-mRNA-1 |
| chr1_4 | CDS | 1982884 | 1983120 | 1982884 | ID=Msa0143070-mRNA-1:cds;Parent=Msa0143070-mRNA-1 |
| chr1_4 | CDS | 1983246 | 1984040 | 1983246 | ID=Msa0143070-mRNA-1:cds;Parent=Msa0143070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
