Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0144830 | XP_003591640.1 | 93.411 | 258 | 2 | 1 | 1 | 243 | 1 | 258 | 6.28e-169 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0144830 | sp|Q3ECP0|TFB1A_ARATH | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 2.02e-77 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0144830 | G7I2Y6 | 93.411 | 258 | 2 | 1 | 1 | 243 | 1 | 258 | 3.00e-169 | 489 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0144830 | TF | BSD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0144830 | MtrunA17_Chr1g0196731 | 93.411 | 258 | 2 | 1 | 1 | 243 | 1 | 258 | 5.77e-173 | 489 |
| Msa0144830 | MtrunA17_Chr6g0479371 | 88.934 | 244 | 11 | 2 | 1 | 228 | 1 | 244 | 1.34e-151 | 435 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0144830 | AT1G55750.4 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 3.42e-79 | 248 |
| Msa0144830 | AT1G55750.2 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 3.42e-79 | 248 |
| Msa0144830 | AT1G55750.3 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 1.02e-78 | 247 |
| Msa0144830 | AT1G55750.5 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 1.02e-78 | 247 |
| Msa0144830 | AT1G55750.1 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 2.05e-78 | 248 |
| Msa0144830 | AT1G55750.6 | 52.675 | 243 | 95 | 3 | 7 | 229 | 5 | 247 | 2.05e-78 | 248 |
| Msa0144830 | AT3G61420.1 | 53.333 | 240 | 92 | 3 | 10 | 229 | 3 | 242 | 8.92e-77 | 243 |
| Msa0144830 | AT3G61420.2 | 52.778 | 216 | 82 | 3 | 34 | 229 | 2 | 217 | 2.90e-67 | 218 |
Find 61 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTACAGAATCAGAATTT+TGG | 0.131111 | 1_4:+4379303 | Msa0144830:CDS |
| TTTCACAGTGGATTTGTATT+TGG | 0.192656 | 1_4:-4377309 | None:intergenic |
| CTACTCCACGTTGCGGATAT+TGG | 0.252030 | 1_4:-4377156 | None:intergenic |
| TTGTTTGATGTTGGATCATT+AGG | 0.268362 | 1_4:-4377469 | None:intergenic |
| TGACATCTATAATACCTTAC+TGG | 0.276591 | 1_4:-4384092 | None:intergenic |
| TGTTCATCGGAAACAACTTT+TGG | 0.286087 | 1_4:-4378923 | None:intergenic |
| CATGTTTGCCGGGAATTTGC+TGG | 0.340170 | 1_4:+4378271 | Msa0144830:CDS |
| TACTCCTGGTGTAATCAAAT+TGG | 0.343161 | 1_4:+4377340 | Msa0144830:CDS |
| AGATGAGCGAGGTAGATTTC+TGG | 0.343713 | 1_4:+4384212 | Msa0144830:intron |
| TTTCAGATCTTCATGTTTGC+CGG | 0.354972 | 1_4:+4378260 | Msa0144830:CDS |
| ACACTGAGGATGAAGCTATT+AGG | 0.375683 | 1_4:+4378965 | Msa0144830:CDS |
| TTAACTTTCGGCTTTCATCT+TGG | 0.379039 | 1_4:-4379721 | None:intergenic |
| TGGTGGGTCAAATTACATTA+AGG | 0.387628 | 1_4:+4385148 | Msa0144830:CDS |
| TGGTTTGGTTGACCCCTCTT+TGG | 0.391372 | 1_4:-4377944 | None:intergenic |
| AAGGTTTAGCCATGGTGGTT+TGG | 0.392565 | 1_4:-4377959 | None:intergenic |
| TGAAGCTATTAGGAGAAGAT+AGG | 0.400825 | 1_4:+4378975 | Msa0144830:CDS |
| TAAATACCTGAGAATGTAGA+AGG | 0.415422 | 1_4:-4377978 | None:intergenic |
| TAATCGAAACAGTCACGTTT+GGG | 0.432554 | 1_4:-4377189 | None:intergenic |
| GAAACTTACCAGCAAATTCC+CGG | 0.433882 | 1_4:-4378279 | None:intergenic |
| CTAATCGAAACAGTCACGTT+TGG | 0.446834 | 1_4:-4377190 | None:intergenic |
| CCTGGTGAACTGCTGGTTTG+AGG | 0.451507 | 1_4:-4384051 | None:intergenic |
| CGCAGAATTCAATTCCGGTA+AGG | 0.451920 | 1_4:-4377249 | None:intergenic |
| GCTAAACCTTCTACATTCTC+AGG | 0.463319 | 1_4:+4377972 | Msa0144830:CDS |
| TAAATTGAAGAAGATTCATA+TGG | 0.463872 | 1_4:+4379262 | Msa0144830:CDS |
| CTGGTGAACTGCTGGTTTGA+GGG | 0.465958 | 1_4:-4384050 | None:intergenic |
| AGAAATGCCTGGTGAACTGC+TGG | 0.490401 | 1_4:-4384058 | None:intergenic |
| TGCTATTGCAGCAGCTGCTG+AGG | 0.495654 | 1_4:+4384276 | Msa0144830:CDS |
| TTCAGATCTTCATGTTTGCC+GGG | 0.499741 | 1_4:+4378261 | Msa0144830:CDS |
| TCAAGCTTGTTGTTTGATGT+TGG | 0.501548 | 1_4:-4377478 | None:intergenic |
| TTGATTACACCAGGAGTACC+AGG | 0.502105 | 1_4:-4377335 | None:intergenic |
| GTGAAAGATCCTGGTACTCC+TGG | 0.503530 | 1_4:+4377326 | Msa0144830:CDS |
| GCAGAATTCAATTCCGGTAA+GGG | 0.508361 | 1_4:-4377248 | None:intergenic |
| GACATCTATAATACCTTACT+GGG | 0.513185 | 1_4:-4384091 | None:intergenic |
| CGAAAGTTAAAACAAAGGAT+TGG | 0.516018 | 1_4:+4379734 | Msa0144830:CDS |
| CCTCAAACCAGCAGTTCACC+AGG | 0.517127 | 1_4:+4384051 | Msa0144830:CDS |
| AAAGCCTACTAGTGATGGTC+GGG | 0.531348 | 1_4:+4379784 | Msa0144830:CDS |
| AAATCCACTGTGAAAGATCC+TGG | 0.541867 | 1_4:+4377317 | Msa0144830:CDS |
| GATCTCTATGCTAAAGCAGC+TGG | 0.550899 | 1_4:+4385128 | Msa0144830:CDS |
| AGCAGTGCTAAGCTGTTCAT+CGG | 0.554114 | 1_4:-4378936 | None:intergenic |
| CTCTATGCTAAAGCAGCTGG+TGG | 0.556364 | 1_4:+4385131 | Msa0144830:CDS |
| ATCGCCGCAGAATTCAATTC+CGG | 0.558204 | 1_4:-4377254 | None:intergenic |
| GTAGAAAACGCGAGAAGCAC+CGG | 0.561208 | 1_4:-4377051 | None:intergenic |
| CATACCCGACCATCACTAGT+AGG | 0.565408 | 1_4:-4379788 | None:intergenic |
| GACACAAAGCCTACTAGTGA+TGG | 0.599822 | 1_4:+4379779 | Msa0144830:CDS |
| TTCTGCGGCGATGTCTTCGT+CGG | 0.603532 | 1_4:+4377265 | Msa0144830:exon |
| GTACAAAATTGAGAAATGCC+TGG | 0.604538 | 1_4:-4384069 | None:intergenic |
| TGTAGAAGGTTTAGCCATGG+TGG | 0.609234 | 1_4:-4377964 | None:intergenic |
| CAAAGCCTACTAGTGATGGT+CGG | 0.625574 | 1_4:+4379783 | Msa0144830:CDS |
| AATACCAATTTGATTACACC+AGG | 0.630251 | 1_4:-4377344 | None:intergenic |
| AAAGCCGAAAGTTAAAACAA+AGG | 0.638776 | 1_4:+4379729 | Msa0144830:CDS |
| GAAAACGCGAGAAGCACCGG+TGG | 0.661728 | 1_4:-4377048 | None:intergenic |
| GAATGTAGAAGGTTTAGCCA+TGG | 0.665550 | 1_4:-4377967 | None:intergenic |
| CTTTAAATTCCAGATGAGCG+AGG | 0.670205 | 1_4:+4384201 | Msa0144830:intron |
| GAGCATTCTACTCCACGTTG+CGG | 0.673044 | 1_4:-4377163 | None:intergenic |
| TCTATGCTAAAGCAGCTGGT+GGG | 0.679637 | 1_4:+4385132 | Msa0144830:CDS |
| CTTACCGGAATTGAATTCTG+CGG | 0.681527 | 1_4:+4377250 | Msa0144830:five_prime_UTR |
| AAAACGCGAGAAGCACCGGT+GGG | 0.707667 | 1_4:-4377047 | None:intergenic |
| AGGGGTCAACCAAACCACCA+TGG | 0.710586 | 1_4:+4377950 | Msa0144830:CDS |
| TTATTCCAATATCCGCAACG+TGG | 0.724661 | 1_4:+4377151 | Msa0144830:five_prime_UTR |
| AGTACCAGGATCTTTCACAG+TGG | 0.761380 | 1_4:-4377321 | None:intergenic |
| GCACTGCTGAAATGACACTG+AGG | 0.799607 | 1_4:+4378951 | Msa0144830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGAACTTTTAAAATTATA+AGG | + | chr1_4:4378196-4378215 | Msa0144830:intron | 10.0% |
| !!! | ATTTTTAAAACATCTTTTAA+TGG | - | chr1_4:4378541-4378560 | None:intergenic | 10.0% |
| !!! | TTAGTATTATTTGTTATATT+GGG | + | chr1_4:4381979-4381998 | Msa0144830:intron | 10.0% |
| !!! | ATATAAGTTATAAGTTGTTT+TGG | + | chr1_4:4377624-4377643 | Msa0144830:intron | 15.0% |
| !!! | TATAAGTTATAAGTTGTTTT+GGG | + | chr1_4:4377625-4377644 | Msa0144830:intron | 15.0% |
| !! | ATCAATAATATTCTGATATT+AGG | - | chr1_4:4377853-4377872 | None:intergenic | 15.0% |
| !!! | GGTATTTATTTTGTTTATTT+CGG | + | chr1_4:4377993-4378012 | Msa0144830:intron | 15.0% |
| !! | ATGTGCTAAATTATATATTT+AGG | + | chr1_4:4378571-4378590 | Msa0144830:intron | 15.0% |
| !! | TGTGCTAAATTATATATTTA+GGG | + | chr1_4:4378572-4378591 | Msa0144830:intron | 15.0% |
| !! | TCTTTGTAAGATAAATTATT+TGG | - | chr1_4:4378651-4378670 | None:intergenic | 15.0% |
| !! | AGCAACTATAAATAAATAAA+TGG | - | chr1_4:4379128-4379147 | None:intergenic | 15.0% |
| !!! | TGAAATATTGAATATTGTTT+TGG | + | chr1_4:4379949-4379968 | Msa0144830:intron | 15.0% |
| !!! | AATTCTAAAAATGCATAATA+AGG | - | chr1_4:4380969-4380988 | None:intergenic | 15.0% |
| !! | TAATAATATCAGACATATTT+GGG | - | chr1_4:4381151-4381170 | None:intergenic | 15.0% |
| !! | ATAATAATATCAGACATATT+TGG | - | chr1_4:4381152-4381171 | None:intergenic | 15.0% |
| !! | TATAACAAATAATACTAAGT+TGG | - | chr1_4:4381977-4381996 | None:intergenic | 15.0% |
| !!! | CTTAGTATTATTTGTTATAT+TGG | + | chr1_4:4381978-4381997 | Msa0144830:intron | 15.0% |
| !! | TATAATGATACTAAATTTCA+AGG | + | chr1_4:4382246-4382265 | Msa0144830:intron | 15.0% |
| !! | AAGAATAATTATAATATGAG+AGG | + | chr1_4:4382526-4382545 | Msa0144830:intron | 15.0% |
| !! | AGAATAATTATAATATGAGA+GGG | + | chr1_4:4382527-4382546 | Msa0144830:intron | 15.0% |
| !! | TCATTGAAATTCTATTTATT+GGG | + | chr1_4:4383105-4383124 | Msa0144830:intron | 15.0% |
| !!! | TAATAAATTGTCATTTCAAA+AGG | + | chr1_4:4383405-4383424 | Msa0144830:intron | 15.0% |
| !! | AAAAATGTGTAAAACTTTAT+AGG | - | chr1_4:4384474-4384493 | None:intergenic | 15.0% |
| !! | ACATACAAAACTTATAAAAA+TGG | - | chr1_4:4385035-4385054 | None:intergenic | 15.0% |
| !!! | ATAAGCTATTTCTATAACAA+TGG | + | chr1_4:4377577-4377596 | Msa0144830:intron | 20.0% |
| !!! | ATAAGTTATAAGTTGTTTTG+GGG | + | chr1_4:4377626-4377645 | Msa0144830:intron | 20.0% |
| !! | GTTATGATTGAAACAATTTA+TGG | + | chr1_4:4377664-4377683 | Msa0144830:intron | 20.0% |
| !! | GCAAATAAAAACATATTGTA+AGG | - | chr1_4:4377831-4377850 | None:intergenic | 20.0% |
| !! | AATTATCATTCATTGAATTG+TGG | + | chr1_4:4378401-4378420 | Msa0144830:intron | 20.0% |
| !!! | TAAAACATCTTTTAATGGTT+TGG | - | chr1_4:4378536-4378555 | None:intergenic | 20.0% |
| !! | GTGCTAAATTATATATTTAG+GGG | + | chr1_4:4378573-4378592 | Msa0144830:intron | 20.0% |
| !! | TGCTAAATTATATATTTAGG+GGG | + | chr1_4:4378574-4378593 | Msa0144830:intron | 20.0% |
| !! | TAAATTGAAGAAGATTCATA+TGG | + | chr1_4:4379262-4379281 | Msa0144830:CDS | 20.0% |
| !! | CAAATCAAATATTTGTGTAT+AGG | + | chr1_4:4379543-4379562 | Msa0144830:intron | 20.0% |
| !!! | TTTATGTATCCGTTTTTATA+TGG | + | chr1_4:4379628-4379647 | Msa0144830:intron | 20.0% |
| !! | TAAGTAATTTACAAGAGAAT+CGG | - | chr1_4:4379669-4379688 | None:intergenic | 20.0% |
| !! | TTCAATATTTCAATTTGATG+TGG | - | chr1_4:4379941-4379960 | None:intergenic | 20.0% |
| !!! | TTTAAAGACTTTATTTTCGA+TGG | - | chr1_4:4380115-4380134 | None:intergenic | 20.0% |
| !! | AAAATTATCCTCTTCATTAA+TGG | + | chr1_4:4380389-4380408 | Msa0144830:intron | 20.0% |
| !! | TCAGTATTAGACTTAATAAA+AGG | - | chr1_4:4380420-4380439 | None:intergenic | 20.0% |
| !!! | TTGTAAACAATTTCCTTTTA+TGG | - | chr1_4:4380915-4380934 | None:intergenic | 20.0% |
| !!! | ATATACCCTAGTTTTTATTA+AGG | + | chr1_4:4381248-4381267 | Msa0144830:intron | 20.0% |
| !! | ACTAAGATTAAAATAAAGGA+CGG | - | chr1_4:4381469-4381488 | None:intergenic | 20.0% |
| !! | ATAGATTTCAATTTCATTCT+CGG | + | chr1_4:4381619-4381638 | Msa0144830:intron | 20.0% |
| !!! | TTTTGTTTTTCAGATAAATC+AGG | + | chr1_4:4382102-4382121 | Msa0144830:intron | 20.0% |
| !!! | TAGTTTGTAATACTGATATT+AGG | + | chr1_4:4382485-4382504 | Msa0144830:intron | 20.0% |
| !! | CTCATTGAAATTCTATTTAT+TGG | + | chr1_4:4383104-4383123 | Msa0144830:intron | 20.0% |
| !!! | ATCTTATGGAATGATTTTTT+GGG | + | chr1_4:4383283-4383302 | Msa0144830:intron | 20.0% |
| !! | CAATTTATTATGACTAATCT+TGG | - | chr1_4:4383395-4383414 | None:intergenic | 20.0% |
| !!! | TTTCATGTTTCTATATTTGT+AGG | + | chr1_4:4383739-4383758 | Msa0144830:intron | 20.0% |
| !!! | GAATTATTTTATTTCTTCCA+TGG | + | chr1_4:4384177-4384196 | Msa0144830:intron | 20.0% |
| !! | TTTAACAGTATCACATAAAT+TGG | - | chr1_4:4384505-4384524 | None:intergenic | 20.0% |
| !! | TAAGTAAACTAAACATAGAT+TGG | + | chr1_4:4384536-4384555 | Msa0144830:intron | 20.0% |
| !!! | AGTTTTTATGCTGTTATAAT+TGG | - | chr1_4:4384620-4384639 | None:intergenic | 20.0% |
| !!! | TTTAATTCAAAAGCGCTTTT+AGG | - | chr1_4:4377228-4377247 | None:intergenic | 25.0% |
| ! | AATGTGAATGCAAATTGAAA+TGG | - | chr1_4:4377385-4377404 | None:intergenic | 25.0% |
| ! | TATTCTGATTGCGAAAATTT+AGG | + | chr1_4:4377910-4377929 | Msa0144830:intron | 25.0% |
| !!! | CTCTTTAAAATTTTCTTCTG+TGG | + | chr1_4:4378366-4378385 | Msa0144830:intron | 25.0% |
| ! | GCTAAATTATATATTTAGGG+GGG | + | chr1_4:4378575-4378594 | Msa0144830:intron | 25.0% |
| ! | AACTGCATTAGAAAATCAAT+AGG | - | chr1_4:4378696-4378715 | None:intergenic | 25.0% |
| ! | CTAGAAATTGTTAACAAAGA+AGG | + | chr1_4:4378727-4378746 | Msa0144830:intron | 25.0% |
| ! | TGAAGTAAAGTAACATGAAA+AGG | + | chr1_4:4378752-4378771 | Msa0144830:intron | 25.0% |
| !!! | GTTTTCCTATTGTGTTTTTT+TGG | + | chr1_4:4378858-4378877 | Msa0144830:intron | 25.0% |
| ! | ATGTACCAAAAAAACACAAT+AGG | - | chr1_4:4378866-4378885 | None:intergenic | 25.0% |
| !!! | AGTTTAAGTTATTTCTTGAC+TGG | + | chr1_4:4379200-4379219 | Msa0144830:intron | 25.0% |
| ! | AAATATTTGTGTATAGGACT+TGG | + | chr1_4:4379549-4379568 | Msa0144830:intron | 25.0% |
| ! | AGATATCCTCCATATAAAAA+CGG | - | chr1_4:4379640-4379659 | None:intergenic | 25.0% |
| !!! | CAATCCTTTGTTTTAACTTT+CGG | - | chr1_4:4379736-4379755 | None:intergenic | 25.0% |
| ! | TTTAGTGTATGACAATTCTA+TGG | + | chr1_4:4380026-4380045 | Msa0144830:intron | 25.0% |
| !!! | AAGTCTTTAAAACTTGTGTT+TGG | + | chr1_4:4380124-4380143 | Msa0144830:intron | 25.0% |
| !!! | AGTCTTTAAAACTTGTGTTT+GGG | + | chr1_4:4380125-4380144 | Msa0144830:intron | 25.0% |
| ! | ATAAAACAAGCTGATTGTAT+CGG | + | chr1_4:4380182-4380201 | Msa0144830:intron | 25.0% |
| ! | TGAGTGTAATAGCTATATTT+GGG | - | chr1_4:4380245-4380264 | None:intergenic | 25.0% |
| ! | ATGAGTGTAATAGCTATATT+TGG | - | chr1_4:4380246-4380265 | None:intergenic | 25.0% |
| !! | GTATACTTTTCTCAAATGTT+TGG | + | chr1_4:4380450-4380469 | Msa0144830:intron | 25.0% |
| !! | AATAAGTTGAAGAGAATACA+TGG | + | chr1_4:4380480-4380499 | Msa0144830:intron | 25.0% |
| ! | CTAATGAACTTCTGTATTTA+TGG | + | chr1_4:4380883-4380902 | Msa0144830:intron | 25.0% |
| !!! | AATTCCATGTTTGTTTTACT+CGG | + | chr1_4:4380985-4381004 | Msa0144830:intron | 25.0% |
| ! | ACAAAAAAGTTTCTTGTTCT+CGG | - | chr1_4:4381020-4381039 | None:intergenic | 25.0% |
| ! | ACACACCTTAATAAAAACTA+GGG | - | chr1_4:4381256-4381275 | None:intergenic | 25.0% |
| ! | AACACACCTTAATAAAAACT+AGG | - | chr1_4:4381257-4381276 | None:intergenic | 25.0% |
| ! | ACACCTTGTAAAAAATAAGT+GGG | + | chr1_4:4381336-4381355 | Msa0144830:intron | 25.0% |
| !!! | GTCCTTTATTTTAATCTTAG+TGG | + | chr1_4:4381468-4381487 | Msa0144830:intron | 25.0% |
| ! | AGCCACTAAGATTAAAATAA+AGG | - | chr1_4:4381473-4381492 | None:intergenic | 25.0% |
| ! | ATTGAAATCTATGTAGCAAA+GGG | - | chr1_4:4381611-4381630 | None:intergenic | 25.0% |
| ! | AATTGAAATCTATGTAGCAA+AGG | - | chr1_4:4381612-4381631 | None:intergenic | 25.0% |
| ! | TTCCAAATATTATACAACAC+TGG | + | chr1_4:4381777-4381796 | Msa0144830:intron | 25.0% |
| ! | AACCAGTGTTGTATAATATT+TGG | - | chr1_4:4381782-4381801 | None:intergenic | 25.0% |
| !!! | ATACAACACTGGTTTTAATA+AGG | + | chr1_4:4381788-4381807 | Msa0144830:intron | 25.0% |
| ! | TAATAATCAAAACAAGCTAC+AGG | - | chr1_4:4381815-4381834 | None:intergenic | 25.0% |
| !! | TCATGCATTTTATACAATGA+TGG | + | chr1_4:4381914-4381933 | Msa0144830:intron | 25.0% |
| ! | TGCATATATGTAATAACAAC+TGG | + | chr1_4:4382065-4382084 | Msa0144830:intron | 25.0% |
| ! | GCATATATGTAATAACAACT+GGG | + | chr1_4:4382066-4382085 | Msa0144830:intron | 25.0% |
| !! | GCTTTAAATGTTTAGCTAAT+TGG | + | chr1_4:4382280-4382299 | Msa0144830:intron | 25.0% |
| ! | TTAAATGTTTAGCTAATTGG+TGG | + | chr1_4:4382283-4382302 | Msa0144830:intron | 25.0% |
| ! | TAAATGTTTAGCTAATTGGT+GGG | + | chr1_4:4382284-4382303 | Msa0144830:intron | 25.0% |
| ! | TATCTATATATAACCCTACT+CGG | - | chr1_4:4382355-4382374 | None:intergenic | 25.0% |
| !!! | CCAATTTTCACATTTAAGTT+AGG | - | chr1_4:4382607-4382626 | None:intergenic | 25.0% |
| ! | CCTAACTTAAATGTGAAAAT+TGG | + | chr1_4:4382604-4382623 | Msa0144830:intron | 25.0% |
| ! | TCCATCATACAAAGTAATAT+GGG | + | chr1_4:4382674-4382693 | Msa0144830:intron | 25.0% |
| !! | GTTTTTCTCTCTCTTTTTTT+TGG | + | chr1_4:4383199-4383218 | Msa0144830:intron | 25.0% |
| !!! | CATCTTATGGAATGATTTTT+TGG | + | chr1_4:4383282-4383301 | Msa0144830:intron | 25.0% |
| !!! | TCTTATGGAATGATTTTTTG+GGG | + | chr1_4:4383284-4383303 | Msa0144830:intron | 25.0% |
| !! | TAAAGTTAGTTAGTTTGATG+AGG | + | chr1_4:4383311-4383330 | Msa0144830:intron | 25.0% |
| !! | TCTAAGCTTTGTATTTCTTA+TGG | + | chr1_4:4383618-4383637 | Msa0144830:intron | 25.0% |
| !! | ATGCTTTTATTAGACTATCT+TGG | + | chr1_4:4383641-4383660 | Msa0144830:intron | 25.0% |
| !! | TGCTTTTATTAGACTATCTT+GGG | + | chr1_4:4383642-4383661 | Msa0144830:intron | 25.0% |
| ! | CAGCAATTTATACAAAAGTT+AGG | - | chr1_4:4383788-4383807 | None:intergenic | 25.0% |
| !! | ACTTTTGTATAAATTGCTGT+TGG | + | chr1_4:4383789-4383808 | Msa0144830:intron | 25.0% |
| !! | TTTAATTTACAGGGATTAGA+GGG | - | chr1_4:4383875-4383894 | None:intergenic | 25.0% |
| !! | ATTTAATTTACAGGGATTAG+AGG | - | chr1_4:4383876-4383895 | None:intergenic | 25.0% |
| !! | AGTTTAGGATGAAATATAAG+AGG | - | chr1_4:4383910-4383929 | None:intergenic | 25.0% |
| ! | GAAAATCAATACTGAAGTTT+AGG | - | chr1_4:4383925-4383944 | None:intergenic | 25.0% |
| ! | TAGTAAATCAGTGAATAAGT+TGG | + | chr1_4:4384770-4384789 | Msa0144830:intron | 25.0% |
| !!! | CATGAAGTAATTTTTTGAAG+AGG | - | chr1_4:4384933-4384952 | None:intergenic | 25.0% |
| ! | CTCTTCAAAAAATTACTTCA+TGG | + | chr1_4:4384931-4384950 | Msa0144830:intron | 25.0% |
| ! | CTATCTTTCAATGTAAGTAA+TGG | + | chr1_4:4385087-4385106 | Msa0144830:intron | 25.0% |
| AGCGAAATTGAGTAGAAAAA+TGG | - | chr1_4:4377096-4377115 | None:intergenic | 30.0% | |
| ATATTGGAATAATCGCGTTT+GGG | - | chr1_4:4377143-4377162 | None:intergenic | 30.0% | |
| ! | CTTTTGAATTAAACCCTTAC+CGG | + | chr1_4:4377235-4377254 | Msa0144830:five_prime_UTR | 30.0% |
| ! | TTTCACAGTGGATTTGTATT+TGG | - | chr1_4:4377312-4377331 | None:intergenic | 30.0% |
| AATACCAATTTGATTACACC+AGG | - | chr1_4:4377347-4377366 | None:intergenic | 30.0% | |
| TTGTTTGATGTTGGATCATT+AGG | - | chr1_4:4377472-4377491 | None:intergenic | 30.0% | |
| TAAGGCTTCAATAGTGATTA+AGG | - | chr1_4:4377813-4377832 | None:intergenic | 30.0% | |
| TAAATACCTGAGAATGTAGA+AGG | - | chr1_4:4377981-4378000 | None:intergenic | 30.0% | |
| ! | TCATTTCATTTTGTGTGCTA+TGG | + | chr1_4:4378126-4378145 | Msa0144830:intron | 30.0% |
| ! | ATTATAAGGTGTTATGTTCC+AGG | + | chr1_4:4378210-4378229 | Msa0144830:intron | 30.0% |
| ! | TTATAAGGTGTTATGTTCCA+GGG | + | chr1_4:4378211-4378230 | Msa0144830:intron | 30.0% |
| ! | TTGCTGGTAAGTTTCTATTT+TGG | + | chr1_4:4378287-4378306 | Msa0144830:intron | 30.0% |
| AAACAGTGTAATAGCAAATC+AGG | - | chr1_4:4378442-4378461 | None:intergenic | 30.0% | |
| GAGTTAGAGTTTCTTTCAAA+AGG | + | chr1_4:4378490-4378509 | Msa0144830:intron | 30.0% | |
| ! | TGGGAATAACTTTTTAAACC+AGG | - | chr1_4:4378610-4378629 | None:intergenic | 30.0% |
| ! | GTGATGCATCAATTTTTCTT+GGG | - | chr1_4:4378629-4378648 | None:intergenic | 30.0% |
| TCTTACAAAGAATTTGAGCA+TGG | + | chr1_4:4378660-4378679 | Msa0144830:intron | 30.0% | |
| GCATTAGAAAATCAATAGGA+AGG | - | chr1_4:4378692-4378711 | None:intergenic | 30.0% | |
| TTGACAGATGAATAAAGAGA+GGG | - | chr1_4:4378810-4378829 | None:intergenic | 30.0% | |
| ATTGACAGATGAATAAAGAG+AGG | - | chr1_4:4378811-4378830 | None:intergenic | 30.0% | |
| ATTGTTTACTATTCTGCTCA+TGG | + | chr1_4:4379042-4379061 | Msa0144830:intron | 30.0% | |
| AGTACAATAGCAAAACAAAG+AGG | - | chr1_4:4379089-4379108 | None:intergenic | 30.0% | |
| ! | AGCTTACAGAATCAGAATTT+TGG | + | chr1_4:4379303-4379322 | Msa0144830:CDS | 30.0% |
| ! | GCTTACAGAATCAGAATTTT+GGG | + | chr1_4:4379304-4379323 | Msa0144830:CDS | 30.0% |
| ! | TATTTATTCCTTGTTTGCCA+AGG | + | chr1_4:4379386-4379405 | Msa0144830:intron | 30.0% |
| ! | ATTTATTCCTTGTTTGCCAA+GGG | + | chr1_4:4379387-4379406 | Msa0144830:intron | 30.0% |
| TTAAATATATAAAGGCCCCA+GGG | - | chr1_4:4379431-4379450 | None:intergenic | 30.0% | |
| ATTAAATATATAAAGGCCCC+AGG | - | chr1_4:4379432-4379451 | None:intergenic | 30.0% | |
| !! | TATAGGACTTGGTCATTTTA+AGG | + | chr1_4:4379560-4379579 | Msa0144830:intron | 30.0% |
| !! | ATAGGACTTGGTCATTTTAA+GGG | + | chr1_4:4379561-4379580 | Msa0144830:intron | 30.0% |
| AAGGGGTTACTCTAATATAT+AGG | + | chr1_4:4379579-4379598 | Msa0144830:intron | 30.0% | |
| !! | ATGTATCCGTTTTTATATGG+AGG | + | chr1_4:4379631-4379650 | Msa0144830:intron | 30.0% |
| TAATTTACAAGAGAATCGGA+GGG | - | chr1_4:4379665-4379684 | None:intergenic | 30.0% | |
| AAAGCCGAAAGTTAAAACAA+AGG | + | chr1_4:4379729-4379748 | Msa0144830:CDS | 30.0% | |
| CGAAAGTTAAAACAAAGGAT+TGG | + | chr1_4:4379734-4379753 | Msa0144830:CDS | 30.0% | |
| !!! | TTTTTTTGATTGCACTCAGA+TGG | + | chr1_4:4379844-4379863 | Msa0144830:intron | 30.0% |
| !!! | TTTTTTGATTGCACTCAGAT+GGG | + | chr1_4:4379845-4379864 | Msa0144830:intron | 30.0% |
| TATGACAATTCTATGGCAAA+CGG | + | chr1_4:4380033-4380052 | Msa0144830:intron | 30.0% | |
| TAATGTTTCGAGATGAAATC+TGG | + | chr1_4:4380294-4380313 | Msa0144830:intron | 30.0% | |
| CCATAAGAAGATAACAAACA+GGG | - | chr1_4:4380365-4380384 | None:intergenic | 30.0% | |
| !! | CCTGTTTGTTATCTTCTTAT+GGG | + | chr1_4:4380363-4380382 | Msa0144830:intron | 30.0% |
| ! | TACTTTTCTCAAATGTTTGG+AGG | + | chr1_4:4380453-4380472 | Msa0144830:intron | 30.0% |
| AAGTACAGATATGACAGTAA+TGG | - | chr1_4:4381099-4381118 | None:intergenic | 30.0% | |
| ACTTTGATAAATACACCTTG+AGG | + | chr1_4:4381297-4381316 | Msa0144830:intron | 30.0% | |
| CACACCTTGTAAAAAATAAG+TGG | + | chr1_4:4381335-4381354 | Msa0144830:intron | 30.0% | |
| !!! | ACACCCACTTATTTTTTACA+AGG | - | chr1_4:4381342-4381361 | None:intergenic | 30.0% |
| TATTCTGCTAATTGTTCTTG+TGG | + | chr1_4:4381499-4381518 | Msa0144830:intron | 30.0% | |
| ATTCTGCTAATTGTTCTTGT+GGG | + | chr1_4:4381500-4381519 | Msa0144830:intron | 30.0% | |
| !! | GCTTTAAAATTGTGCAAAAG+AGG | - | chr1_4:4381755-4381774 | None:intergenic | 30.0% |
| ATAACAGCATAAATCAAACC+CGG | - | chr1_4:4382316-4382335 | None:intergenic | 30.0% | |
| CTACAATACAACAAGTTTCA+TGG | + | chr1_4:4382632-4382651 | Msa0144830:intron | 30.0% | |
| GTCCATCATACAAAGTAATA+TGG | + | chr1_4:4382673-4382692 | Msa0144830:intron | 30.0% | |
| CCATCATACAAAGTAATATG+GGG | + | chr1_4:4382675-4382694 | Msa0144830:intron | 30.0% | |
| CATCATACAAAGTAATATGG+GGG | + | chr1_4:4382676-4382695 | Msa0144830:intron | 30.0% | |
| ATCATACAAAGTAATATGGG+GGG | + | chr1_4:4382677-4382696 | Msa0144830:intron | 30.0% | |
| ! | CCAATTTTCTCTTCAATGAT+CGG | - | chr1_4:4382937-4382956 | None:intergenic | 30.0% |
| CGATCATTGAAGAGAAAATT+GGG | + | chr1_4:4382935-4382954 | Msa0144830:intron | 30.0% | |
| !!! | ACTGCCACATTTTTTACAAA+GGG | - | chr1_4:4382967-4382986 | None:intergenic | 30.0% |
| GGTTTGAACAAAATTAAGAG+AGG | + | chr1_4:4382999-4383018 | Msa0144830:intron | 30.0% | |
| CAATATCTTAAGTCTTACGA+TGG | - | chr1_4:4383041-4383060 | None:intergenic | 30.0% | |
| TCGTAAGACTTAAGATATTG+TGG | + | chr1_4:4383041-4383060 | Msa0144830:intron | 30.0% | |
| AATCATGTTGATACTCAGAT+AGG | - | chr1_4:4383178-4383197 | None:intergenic | 30.0% | |
| ! | TGTTTGAGTTCTACATCTTA+TGG | + | chr1_4:4383269-4383288 | Msa0144830:intron | 30.0% |
| !!! | AAGGTTTTATTGAAGTTGTC+TGG | + | chr1_4:4383424-4383443 | Msa0144830:intron | 30.0% |
| !! | TGAGAAAGTTTTCTAGTGTT+TGG | + | chr1_4:4383531-4383550 | Msa0144830:intron | 30.0% |
| !! | GAGAAAGTTTTCTAGTGTTT+GGG | + | chr1_4:4383532-4383551 | Msa0144830:intron | 30.0% |
| !! | AGAAAGTTTTCTAGTGTTTG+GGG | + | chr1_4:4383533-4383552 | Msa0144830:intron | 30.0% |
| AAGCTTAGACATAAGCAAAA+GGG | - | chr1_4:4383607-4383626 | None:intergenic | 30.0% | |
| AAAGCTTAGACATAAGCAAA+AGG | - | chr1_4:4383608-4383627 | None:intergenic | 30.0% | |
| ATAATGCAGTCTACTAATTG+AGG | + | chr1_4:4383690-4383709 | Msa0144830:intron | 30.0% | |
| TTAATTTACAGGGATTAGAG+GGG | - | chr1_4:4383874-4383893 | None:intergenic | 30.0% | |
| ACAACAATGCAAAGAAAGTA+AGG | - | chr1_4:4384015-4384034 | None:intergenic | 30.0% | |
| GACATCTATAATACCTTACT+GGG | - | chr1_4:4384094-4384113 | None:intergenic | 30.0% | |
| TGACATCTATAATACCTTAC+TGG | - | chr1_4:4384095-4384114 | None:intergenic | 30.0% | |
| !!! | CAATAGCATTTTTGGTACTA+TGG | - | chr1_4:4384264-4384283 | None:intergenic | 30.0% |
| CATAAGTTTCATTGAAGTCA+TGG | + | chr1_4:4384686-4384705 | Msa0144830:intron | 30.0% | |
| TTGGTTTCAAAATCGAATCA+TGG | + | chr1_4:4384789-4384808 | Msa0144830:intron | 30.0% | |
| !!! | AAAACTCTTTTAGCTTCCAT+CGG | + | chr1_4:4384823-4384842 | Msa0144830:intron | 30.0% |
| !!! | GTAAGTAATGGATTTTGTTG+TGG | + | chr1_4:4385099-4385118 | Msa0144830:intron | 30.0% |
| !! | ATGGATTTTGTTGTGGTAAA+AGG | + | chr1_4:4385106-4385125 | Msa0144830:intron | 30.0% |
| GATATTGGAATAATCGCGTT+TGG | - | chr1_4:4377144-4377163 | None:intergenic | 35.0% | |
| TAATCGAAACAGTCACGTTT+GGG | - | chr1_4:4377192-4377211 | None:intergenic | 35.0% | |
| TACTCCTGGTGTAATCAAAT+TGG | + | chr1_4:4377340-4377359 | Msa0144830:CDS | 35.0% | |
| !! | TCAAGCTTGTTGTTTGATGT+TGG | - | chr1_4:4377481-4377500 | None:intergenic | 35.0% |
| AGGTCAAAAAAACACCAAAG+AGG | + | chr1_4:4377930-4377949 | Msa0144830:intron | 35.0% | |
| GGTCAAAAAAACACCAAAGA+GGG | + | chr1_4:4377931-4377950 | Msa0144830:intron | 35.0% | |
| GTCAAAAAAACACCAAAGAG+GGG | + | chr1_4:4377932-4377951 | Msa0144830:CDS | 35.0% | |
| TGCTATTCTTTGCTACATTG+TGG | + | chr1_4:4378020-4378039 | Msa0144830:intron | 35.0% | |
| TATTCTTTGCTACATTGTGG+TGG | + | chr1_4:4378023-4378042 | Msa0144830:intron | 35.0% | |
| TTTCAGATCTTCATGTTTGC+CGG | + | chr1_4:4378260-4378279 | Msa0144830:CDS | 35.0% | |
| TTCATTGAATTGTGGTACAC+TGG | + | chr1_4:4378409-4378428 | Msa0144830:intron | 35.0% | |
| ! | GGTGATGCATCAATTTTTCT+TGG | - | chr1_4:4378630-4378649 | None:intergenic | 35.0% |
| ! | TTCATCGGAAACAACTTTTG+GGG | - | chr1_4:4378924-4378943 | None:intergenic | 35.0% |
| ! | GTTCATCGGAAACAACTTTT+GGG | - | chr1_4:4378925-4378944 | None:intergenic | 35.0% |
| ! | TGTTCATCGGAAACAACTTT+TGG | - | chr1_4:4378926-4378945 | None:intergenic | 35.0% |
| TGAAGCTATTAGGAGAAGAT+AGG | + | chr1_4:4378975-4378994 | Msa0144830:CDS | 35.0% | |
| ! | AGAATTTTGGGCTACAAAGA+AGG | + | chr1_4:4379316-4379335 | Msa0144830:CDS | 35.0% |
| ATCTGGATATTAAACTACCC+TGG | + | chr1_4:4379411-4379430 | Msa0144830:intron | 35.0% | |
| TCTGGATATTAAACTACCCT+GGG | + | chr1_4:4379412-4379431 | Msa0144830:intron | 35.0% | |
| !! | TAGGACTTGGTCATTTTAAG+GGG | + | chr1_4:4379562-4379581 | Msa0144830:intron | 35.0% |
| GTAATTTACAAGAGAATCGG+AGG | - | chr1_4:4379666-4379685 | None:intergenic | 35.0% | |
| TTAACTTTCGGCTTTCATCT+TGG | - | chr1_4:4379724-4379743 | None:intergenic | 35.0% | |
| ATGACAATTCTATGGCAAAC+GGG | + | chr1_4:4380034-4380053 | Msa0144830:intron | 35.0% | |
| !! | GGCTTTGAATCTGATGAATA+TGG | + | chr1_4:4380055-4380074 | Msa0144830:intron | 35.0% |
| !! | CCCTGTTTGTTATCTTCTTA+TGG | + | chr1_4:4380362-4380381 | Msa0144830:intron | 35.0% |
| CCCATAAGAAGATAACAAAC+AGG | - | chr1_4:4380366-4380385 | None:intergenic | 35.0% | |
| TATCCTCTTCATTAATGGTG+AGG | + | chr1_4:4380394-4380413 | Msa0144830:intron | 35.0% | |
| ! | TATAGACTTTTCTCTCGAGT+CGG | + | chr1_4:4380557-4380576 | Msa0144830:intron | 35.0% |
| GCATAAGTGTTAAATCTCGA+GGG | - | chr1_4:4380611-4380630 | None:intergenic | 35.0% | |
| TGCATAAGTGTTAAATCTCG+AGG | - | chr1_4:4380612-4380631 | None:intergenic | 35.0% | |
| TTAACACTTATGCATTCCCA+TGG | + | chr1_4:4380618-4380637 | Msa0144830:intron | 35.0% | |
| TAGAGAAGACACAATAGGAT+TGG | + | chr1_4:4380712-4380731 | Msa0144830:intron | 35.0% | |
| AGAGAAGACACAATAGGATT+GGG | + | chr1_4:4380713-4380732 | Msa0144830:intron | 35.0% | |
| ACAATAGGATTGGGAAAATC+AGG | + | chr1_4:4380722-4380741 | Msa0144830:intron | 35.0% | |
| ATGTCCTTGTCATGTAAATG+TGG | - | chr1_4:4380794-4380813 | None:intergenic | 35.0% | |
| TTAGCATAAGACGACAATCT+AGG | - | chr1_4:4380867-4380886 | None:intergenic | 35.0% | |
| TTTATGGACGAGTCCATAAA+AGG | + | chr1_4:4380899-4380918 | Msa0144830:intron | 35.0% | |
| AGAACCGAGTAAAACAAACA+TGG | - | chr1_4:4380992-4381011 | None:intergenic | 35.0% | |
| ACAGATATGACAGTAATGGT+GGG | - | chr1_4:4381095-4381114 | None:intergenic | 35.0% | |
| TACAGATATGACAGTAATGG+TGG | - | chr1_4:4381096-4381115 | None:intergenic | 35.0% | |
| TTATAGCAACATACACCTCA+AGG | - | chr1_4:4381315-4381334 | None:intergenic | 35.0% | |
| GTATTCTAGCAAATGCCTAT+AGG | - | chr1_4:4381377-4381396 | None:intergenic | 35.0% | |
| ! | ATTTGCTAGAATACACCCTA+AGG | + | chr1_4:4381383-4381402 | Msa0144830:intron | 35.0% |
| ! | TTTTAGCAAGCTACACCTTA+GGG | - | chr1_4:4381401-4381420 | None:intergenic | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr1_4:4381422-4381441 | Msa0144830:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr1_4:4381428-4381447 | None:intergenic | 35.0% |
| TTCTGCTAATTGTTCTTGTG+GGG | + | chr1_4:4381501-4381520 | Msa0144830:intron | 35.0% | |
| ATCTCTCATTTCTCTTCATC+TGG | + | chr1_4:4381651-4381670 | Msa0144830:intron | 35.0% | |
| AGAGATAAAATGTCAGGCAT+GGG | + | chr1_4:4382144-4382163 | Msa0144830:intron | 35.0% | |
| TAAACGATTCAAGACTTAGC+TGG | - | chr1_4:4382209-4382228 | None:intergenic | 35.0% | |
| TTGCACATGTAACATGACAT+AGG | + | chr1_4:4382413-4382432 | Msa0144830:intron | 35.0% | |
| CCCCATATTACTTTGTATGA+TGG | - | chr1_4:4382678-4382697 | None:intergenic | 35.0% | |
| CTGAAATGGAGGAATTCTTT+GGG | + | chr1_4:4382739-4382758 | Msa0144830:intron | 35.0% | |
| GTTGTACAAGACAAGATGTT+TGG | + | chr1_4:4382820-4382839 | Msa0144830:intron | 35.0% | |
| CCGATCATTGAAGAGAAAAT+TGG | + | chr1_4:4382934-4382953 | Msa0144830:intron | 35.0% | |
| !!! | TGCCACATTTTTTACAAAGG+GGG | - | chr1_4:4382965-4382984 | None:intergenic | 35.0% |
| !!! | CTGCCACATTTTTTACAAAG+GGG | - | chr1_4:4382966-4382985 | None:intergenic | 35.0% |
| !!! | GACTGCCACATTTTTTACAA+AGG | - | chr1_4:4382968-4382987 | None:intergenic | 35.0% |
| ATTTCAATGAGAACCCCAAT+AGG | - | chr1_4:4383095-4383114 | None:intergenic | 35.0% | |
| TCCTCATTAATGTACGTCTA+CGG | - | chr1_4:4383357-4383376 | None:intergenic | 35.0% | |
| CATTAATGAGGAGGTTGAAA+AGG | + | chr1_4:4383365-4383384 | Msa0144830:intron | 35.0% | |
| !! | GAAAGTTTTCTAGTGTTTGG+GGG | + | chr1_4:4383534-4383553 | Msa0144830:intron | 35.0% |
| !! | CAGCTTCCATTTTTGTCTTA+CGG | + | chr1_4:4383566-4383585 | Msa0144830:intron | 35.0% |
| !! | AGCTTCCATTTTTGTCTTAC+GGG | + | chr1_4:4383567-4383586 | Msa0144830:intron | 35.0% |
| GTTTCTATATTTGTAGGTCG+TGG | + | chr1_4:4383745-4383764 | Msa0144830:intron | 35.0% | |
| TAATTTACAGGGATTAGAGG+GGG | - | chr1_4:4383873-4383892 | None:intergenic | 35.0% | |
| GTACAAAATTGAGAAATGCC+TGG | - | chr1_4:4384072-4384091 | None:intergenic | 35.0% | |
| ! | TCTCAATTTTGTACCCAGTA+AGG | + | chr1_4:4384078-4384097 | Msa0144830:CDS | 35.0% |
| TAATTCAGTGTGCAGAGTAA+TGG | - | chr1_4:4384163-4384182 | None:intergenic | 35.0% | |
| !!! | CGAAGCACAATTTTTTTTGC+AGG | - | chr1_4:4384975-4384994 | None:intergenic | 35.0% |
| TAAAAATGGCCATCGTACAA+GGG | - | chr1_4:4385021-4385040 | None:intergenic | 35.0% | |
| ATAAAAATGGCCATCGTACA+AGG | - | chr1_4:4385022-4385041 | None:intergenic | 35.0% | |
| ! | TGGTGGGTCAAATTACATTA+AGG | + | chr1_4:4385148-4385167 | Msa0144830:CDS | 35.0% |
| TTATTCCAATATCCGCAACG+TGG | + | chr1_4:4377151-4377170 | Msa0144830:five_prime_UTR | 40.0% | |
| CTAATCGAAACAGTCACGTT+TGG | - | chr1_4:4377193-4377212 | None:intergenic | 40.0% | |
| GCAGAATTCAATTCCGGTAA+GGG | - | chr1_4:4377251-4377270 | None:intergenic | 40.0% | |
| CTTACCGGAATTGAATTCTG+CGG | + | chr1_4:4377250-4377269 | Msa0144830:five_prime_UTR | 40.0% | |
| AAATCCACTGTGAAAGATCC+TGG | + | chr1_4:4377317-4377336 | Msa0144830:CDS | 40.0% | |
| CAAAGCGAAAATCACGAATC+AGG | - | chr1_4:4377422-4377441 | None:intergenic | 40.0% | |
| GTTTCAATCATAACCACTCC+AGG | - | chr1_4:4377658-4377677 | None:intergenic | 40.0% | |
| GAATGTAGAAGGTTTAGCCA+TGG | - | chr1_4:4377970-4377989 | None:intergenic | 40.0% | |
| GCTAAACCTTCTACATTCTC+AGG | + | chr1_4:4377972-4377991 | Msa0144830:CDS | 40.0% | |
| ATCGAACAAACACAACACTC+AGG | - | chr1_4:4378060-4378079 | None:intergenic | 40.0% | |
| TTCAGATCTTCATGTTTGCC+GGG | + | chr1_4:4378261-4378280 | Msa0144830:CDS | 40.0% | |
| GAAACTTACCAGCAAATTCC+CGG | - | chr1_4:4378282-4378301 | None:intergenic | 40.0% | |
| !! | AACTCTGAAACACAAGCCTA+CGG | - | chr1_4:4378475-4378494 | None:intergenic | 40.0% |
| ! | TTTTGGTACATTTGAGCAGC+TGG | + | chr1_4:4378875-4378894 | Msa0144830:intron | 40.0% |
| ACACTGAGGATGAAGCTATT+AGG | + | chr1_4:4378965-4378984 | Msa0144830:CDS | 40.0% | |
| TAAGACGACCATATGACCAT+GGG | - | chr1_4:4379181-4379200 | None:intergenic | 40.0% | |
| GTTTAATATCCAGATGCCCT+TGG | - | chr1_4:4379406-4379425 | None:intergenic | 40.0% | |
| CTGGATATTAAACTACCCTG+GGG | + | chr1_4:4379413-4379432 | Msa0144830:intron | 40.0% | |
| ! | TGAGCACATAACTCAGCTTT+TGG | + | chr1_4:4379998-4380017 | Msa0144830:intron | 40.0% |
| ! | ATAGACTTTTCTCTCGAGTC+GGG | + | chr1_4:4380558-4380577 | Msa0144830:intron | 40.0% |
| TTGGGTAGAGAAGACACAAT+AGG | + | chr1_4:4380707-4380726 | Msa0144830:intron | 40.0% | |
| GACTCCACATTTACATGACA+AGG | + | chr1_4:4380787-4380806 | Msa0144830:intron | 40.0% | |
| AGATATGACAGTAATGGTGG+GGG | - | chr1_4:4381093-4381112 | None:intergenic | 40.0% | |
| CAGATATGACAGTAATGGTG+GGG | - | chr1_4:4381094-4381113 | None:intergenic | 40.0% | |
| TGTACGTTAGCAACTCCTAT+AGG | + | chr1_4:4381359-4381378 | Msa0144830:intron | 40.0% | |
| !! | GTTTTAGCAAGCTACACCTT+AGG | - | chr1_4:4381402-4381421 | None:intergenic | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr1_4:4381421-4381440 | Msa0144830:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr1_4:4381429-4381448 | None:intergenic | 40.0% |
| AGGACGGCTATATATTTGCT+AGG | - | chr1_4:4381453-4381472 | None:intergenic | 40.0% | |
| ACATGCATCAAAGGAAGCTT+AGG | - | chr1_4:4381952-4381971 | None:intergenic | 40.0% | |
| AAGTTGGCTACATGCATCAA+AGG | - | chr1_4:4381961-4381980 | None:intergenic | 40.0% | |
| GACTCCAGAGATAAAATGTC+AGG | + | chr1_4:4382138-4382157 | Msa0144830:intron | 40.0% | |
| ! | CATGCCTGACATTTTATCTC+TGG | - | chr1_4:4382145-4382164 | None:intergenic | 40.0% |
| CAGAGATAAAATGTCAGGCA+TGG | + | chr1_4:4382143-4382162 | Msa0144830:intron | 40.0% | |
| GTTAGGATATGTCTCTTCCA+GGG | - | chr1_4:4382590-4382609 | None:intergenic | 40.0% | |
| AGTTAGGATATGTCTCTTCC+AGG | - | chr1_4:4382591-4382610 | None:intergenic | 40.0% | |
| AAAGTAATATGGGGGGATAG+AGG | + | chr1_4:4382684-4382703 | Msa0144830:intron | 40.0% | |
| AAGTAATATGGGGGGATAGA+GGG | + | chr1_4:4382685-4382704 | Msa0144830:intron | 40.0% | |
| CCAAAGAATTCCTCCATTTC+AGG | - | chr1_4:4382741-4382760 | None:intergenic | 40.0% | |
| CCTGAAATGGAGGAATTCTT+TGG | + | chr1_4:4382738-4382757 | Msa0144830:intron | 40.0% | |
| CACTGAGTTTACTTTCTCGT+TGG | - | chr1_4:4382856-4382875 | None:intergenic | 40.0% | |
| AACGAACAACCACAGAAGAT+TGG | + | chr1_4:4382902-4382921 | Msa0144830:intron | 40.0% | |
| ATTGCTGATCCAATCTTCTG+TGG | - | chr1_4:4382914-4382933 | None:intergenic | 40.0% | |
| AGCCCCCTTTGTAAAAAATG+TGG | + | chr1_4:4382960-4382979 | Msa0144830:intron | 40.0% | |
| AAAATGTGGCAGTCTCTTCT+CGG | + | chr1_4:4382974-4382993 | Msa0144830:intron | 40.0% | |
| ACCGTAGACGTACATTAATG+AGG | + | chr1_4:4383353-4383372 | Msa0144830:intron | 40.0% | |
| GTAGACGTACATTAATGAGG+AGG | + | chr1_4:4383356-4383375 | Msa0144830:intron | 40.0% | |
| !! | TTGTCTGGCTTCTGTTTTGA+AGG | + | chr1_4:4383439-4383458 | Msa0144830:intron | 40.0% |
| !!! | GGCTTCTGTTTTGAAGGTTA+AGG | + | chr1_4:4383445-4383464 | Msa0144830:intron | 40.0% |
| !! | TCCATTTTTGTCTTACGGGT+TGG | + | chr1_4:4383571-4383590 | Msa0144830:intron | 40.0% |
| TCCAACCCGTAAGACAAAAA+TGG | - | chr1_4:4383575-4383594 | None:intergenic | 40.0% | |
| TGCAGTCTACTAATTGAGGA+AGG | + | chr1_4:4383694-4383713 | Msa0144830:intron | 40.0% | |
| ! | CATCTGGAATTTAAAGGCCA+TGG | - | chr1_4:4384197-4384216 | None:intergenic | 40.0% |
| ! | CTCGCTCATCTGGAATTTAA+AGG | - | chr1_4:4384203-4384222 | None:intergenic | 40.0% |
| CTTTAAATTCCAGATGAGCG+AGG | + | chr1_4:4384201-4384220 | Msa0144830:intron | 40.0% | |
| ! | AGCTGCTGCAATAGCATTTT+TGG | - | chr1_4:4384272-4384291 | None:intergenic | 40.0% |
| GTTGTTAGTATTTCGCTGGA+TGG | + | chr1_4:4384569-4384588 | Msa0144830:intron | 40.0% | |
| ! | CTGGATGGAGTAATCTTTTG+TGG | + | chr1_4:4384584-4384603 | Msa0144830:intron | 40.0% |
| TGCGAATACTCTTCTCAAGT+AGG | - | chr1_4:4384852-4384871 | None:intergenic | 40.0% | |
| !! | AGAAGAGTATTCGCAATGTG+AGG | + | chr1_4:4384857-4384876 | Msa0144830:intron | 40.0% |
| !! | GAAGAGTATTCGCAATGTGA+GGG | + | chr1_4:4384858-4384877 | Msa0144830:intron | 40.0% |
| ! | TTTTTGCAGGTATGCGTCAA+TGG | - | chr1_4:4384962-4384981 | None:intergenic | 40.0% |
| TGGAATAATCGCGTTTGGGA+GGG | - | chr1_4:4377139-4377158 | None:intergenic | 45.0% | |
| TTGGAATAATCGCGTTTGGG+AGG | - | chr1_4:4377140-4377159 | None:intergenic | 45.0% | |
| CGCAGAATTCAATTCCGGTA+AGG | - | chr1_4:4377252-4377271 | None:intergenic | 45.0% | |
| ATCGCCGCAGAATTCAATTC+CGG | - | chr1_4:4377257-4377276 | None:intergenic | 45.0% | |
| AGTACCAGGATCTTTCACAG+TGG | - | chr1_4:4377324-4377343 | None:intergenic | 45.0% | |
| !! | TTGATTACACCAGGAGTACC+AGG | - | chr1_4:4377338-4377357 | None:intergenic | 45.0% |
| AAGGTTTAGCCATGGTGGTT+TGG | - | chr1_4:4377962-4377981 | None:intergenic | 45.0% | |
| TGTAGAAGGTTTAGCCATGG+TGG | - | chr1_4:4377967-4377986 | None:intergenic | 45.0% | |
| ACTCAAAGATGTAACTGCCC+TGG | - | chr1_4:4378231-4378250 | None:intergenic | 45.0% | |
| CTGTTTAACCGTTTGACCGT+AGG | + | chr1_4:4378456-4378475 | Msa0144830:intron | 45.0% | |
| AACACAAGCCTACGGTCAAA+CGG | - | chr1_4:4378467-4378486 | None:intergenic | 45.0% | |
| !!! | ACAACTTTTGGGGCTTCTAC+AGG | - | chr1_4:4378914-4378933 | None:intergenic | 45.0% |
| AGCAGTGCTAAGCTGTTCAT+CGG | - | chr1_4:4378939-4378958 | None:intergenic | 45.0% | |
| CTAAGACGACCATATGACCA+TGG | - | chr1_4:4379182-4379201 | None:intergenic | 45.0% | |
| GACACAAAGCCTACTAGTGA+TGG | + | chr1_4:4379779-4379798 | Msa0144830:CDS | 45.0% | |
| CAAAGCCTACTAGTGATGGT+CGG | + | chr1_4:4379783-4379802 | Msa0144830:CDS | 45.0% | |
| AAAGCCTACTAGTGATGGTC+GGG | + | chr1_4:4379784-4379803 | Msa0144830:CDS | 45.0% | |
| ! | TGATTGCACTCAGATGGGTT+TGG | + | chr1_4:4379850-4379869 | Msa0144830:intron | 45.0% |
| AGGCCTCACCATTAATGAAG+AGG | - | chr1_4:4380400-4380419 | None:intergenic | 45.0% | |
| ATCTCTTCCAGCTTAACCAG+AGG | - | chr1_4:4380662-4380681 | None:intergenic | 45.0% | |
| GTGCTGAGAGATCATGAACA+TGG | - | chr1_4:4382022-4382041 | None:intergenic | 45.0% | |
| TGTTCATGATCTCTCAGCAC+TGG | + | chr1_4:4382022-4382041 | Msa0144830:intron | 45.0% | |
| ACAGAAATAGCATGCCGAGT+AGG | + | chr1_4:4382338-4382357 | Msa0144830:intron | 45.0% | |
| CAGAAATAGCATGCCGAGTA+GGG | + | chr1_4:4382339-4382358 | Msa0144830:intron | 45.0% | |
| ! | GGGTGTTTTCACTACATCTC+TGG | + | chr1_4:4382547-4382566 | Msa0144830:intron | 45.0% |
| TTTCACTACATCTCTGGCAG+TGG | + | chr1_4:4382553-4382572 | Msa0144830:intron | 45.0% | |
| TTCACTACATCTCTGGCAGT+GGG | + | chr1_4:4382554-4382573 | Msa0144830:intron | 45.0% | |
| TATGTCTCTTCCAGGGCAAA+TGG | - | chr1_4:4382583-4382602 | None:intergenic | 45.0% | |
| TCTAAGCAGTGTGCCTGAAA+TGG | + | chr1_4:4382725-4382744 | Msa0144830:intron | 45.0% | |
| ATGTAGCCTACTCCACCTAT+TGG | + | chr1_4:4383077-4383096 | Msa0144830:intron | 45.0% | |
| TGTAGCCTACTCCACCTATT+GGG | + | chr1_4:4383078-4383097 | Msa0144830:intron | 45.0% | |
| TCAATGAGAACCCCAATAGG+TGG | - | chr1_4:4383092-4383111 | None:intergenic | 45.0% | |
| !! | AGTTTTCTAGTGTTTGGGGG+TGG | + | chr1_4:4383537-4383556 | Msa0144830:intron | 45.0% |
| AGACTATCTTGGGACTGCAT+TGG | + | chr1_4:4383652-4383671 | Msa0144830:intron | 45.0% | |
| ! | CTGGTTTGAGGGCAAAAATC+TGG | - | chr1_4:4384042-4384061 | None:intergenic | 45.0% |
| AGAAATCTACCTCGCTCATC+TGG | - | chr1_4:4384213-4384232 | None:intergenic | 45.0% | |
| AGATGAGCGAGGTAGATTTC+TGG | + | chr1_4:4384212-4384231 | Msa0144830:intron | 45.0% | |
| ! | GCGTGTTGTTAGTATTTCGC+TGG | + | chr1_4:4384565-4384584 | Msa0144830:intron | 45.0% |
| ! | ATGTGAGGGCATGTCATGTT+TGG | + | chr1_4:4384872-4384891 | Msa0144830:intron | 45.0% |
| ! | TGTGAGGGCATGTCATGTTT+GGG | + | chr1_4:4384873-4384892 | Msa0144830:intron | 45.0% |
| !!! | TGTGCTTCGCTGATTTTGTG+AGG | + | chr1_4:4384986-4385005 | Msa0144830:intron | 45.0% |
| GATCTCTATGCTAAAGCAGC+TGG | + | chr1_4:4385128-4385147 | Msa0144830:CDS | 45.0% | |
| TCTATGCTAAAGCAGCTGGT+GGG | + | chr1_4:4385132-4385151 | Msa0144830:CDS | 45.0% | |
| !!! | AAATAAAATATATTTTTTGT+TGG | + | chr1_4:4378318-4378337 | Msa0144830:intron | 5.0% |
| !! | TATCATTATTAAATATATAA+AGG | - | chr1_4:4379439-4379458 | None:intergenic | 5.0% |
| !!! | AAAAATTTATTTAATTTACA+GGG | - | chr1_4:4383884-4383903 | None:intergenic | 5.0% |
| !!! | AAAAAATTTATTTAATTTAC+AGG | - | chr1_4:4383885-4383904 | None:intergenic | 5.0% |
| ! | GTAGAAAACGCGAGAAGCAC+CGG | - | chr1_4:4377054-4377073 | None:intergenic | 50.0% |
| CTACTCCACGTTGCGGATAT+TGG | - | chr1_4:4377159-4377178 | None:intergenic | 50.0% | |
| GAGCATTCTACTCCACGTTG+CGG | - | chr1_4:4377166-4377185 | None:intergenic | 50.0% | |
| GTGAAAGATCCTGGTACTCC+TGG | + | chr1_4:4377326-4377345 | Msa0144830:CDS | 50.0% | |
| !!! | GTTGTTTTGGGGAGCTATCC+TGG | + | chr1_4:4377637-4377656 | Msa0144830:intron | 50.0% |
| !! | TGGTTTGGTTGACCCCTCTT+TGG | - | chr1_4:4377947-4377966 | None:intergenic | 50.0% |
| CATGTTTGCCGGGAATTTGC+TGG | + | chr1_4:4378271-4378290 | Msa0144830:CDS | 50.0% | |
| !! | TTAGGGGGGTGTTTGTTTCC+TGG | + | chr1_4:4378589-4378608 | Msa0144830:intron | 50.0% |
| GCACTGCTGAAATGACACTG+AGG | + | chr1_4:4378951-4378970 | Msa0144830:CDS | 50.0% | |
| ! | CATGGGCTACTGCTACTAAG+TGG | - | chr1_4:4379164-4379183 | None:intergenic | 50.0% |
| CACTTAGTAGCAGTAGCCCA+TGG | + | chr1_4:4379162-4379181 | Msa0144830:intron | 50.0% | |
| AGCAGTAGCCCATGGTCATA+TGG | + | chr1_4:4379170-4379189 | Msa0144830:intron | 50.0% | |
| CATACCCGACCATCACTAGT+AGG | - | chr1_4:4379791-4379810 | None:intergenic | 50.0% | |
| CTACTAGTGATGGTCGGGTA+TGG | + | chr1_4:4379789-4379808 | Msa0144830:intron | 50.0% | |
| ! | ACTTTTCTCTCGAGTCGGGT+AGG | + | chr1_4:4380562-4380581 | Msa0144830:intron | 50.0% |
| CACTTATGCATTCCCATGGC+TGG | + | chr1_4:4380622-4380641 | Msa0144830:intron | 50.0% | |
| TTGGGTTCGAATCCAGCCAT+GGG | - | chr1_4:4380637-4380656 | None:intergenic | 50.0% | |
| CCAGCTTAACCAGAGGTCTT+GGG | - | chr1_4:4380655-4380674 | None:intergenic | 50.0% | |
| TCCAGCTTAACCAGAGGTCT+TGG | - | chr1_4:4380656-4380675 | None:intergenic | 50.0% | |
| GCGCTTGGATGAGATGACAA+GGG | - | chr1_4:4380685-4380704 | None:intergenic | 50.0% | |
| AGCGCTTGGATGAGATGACA+AGG | - | chr1_4:4380686-4380705 | None:intergenic | 50.0% | |
| TCATCTCATCCAAGCGCTCT+TGG | + | chr1_4:4380688-4380707 | Msa0144830:intron | 50.0% | |
| CATCTCATCCAAGCGCTCTT+GGG | + | chr1_4:4380689-4380708 | Msa0144830:intron | 50.0% | |
| GCTAATTGGTGGGAGCTAAC+CGG | + | chr1_4:4382294-4382313 | Msa0144830:intron | 50.0% | |
| CTAATTGGTGGGAGCTAACC+GGG | + | chr1_4:4382295-4382314 | Msa0144830:intron | 50.0% | |
| TCACTACATCTCTGGCAGTG+GGG | + | chr1_4:4382555-4382574 | Msa0144830:intron | 50.0% | |
| TAGAGGGTGACGTCAATCGT+AGG | + | chr1_4:4382701-4382720 | Msa0144830:intron | 50.0% | |
| AAGCAGTGTGCCTGAAATGG+AGG | + | chr1_4:4382728-4382747 | Msa0144830:intron | 50.0% | |
| GTAGCCTACTCCACCTATTG+GGG | + | chr1_4:4383079-4383098 | Msa0144830:intron | 50.0% | |
| AGAACCCCAATAGGTGGAGT+AGG | - | chr1_4:4383086-4383105 | None:intergenic | 50.0% | |
| ACAGGGATTAGAGGGGGAAA+AGG | - | chr1_4:4383867-4383886 | None:intergenic | 50.0% | |
| !! | CTGGTGAACTGCTGGTTTGA+GGG | - | chr1_4:4384053-4384072 | None:intergenic | 50.0% |
| AGAAATGCCTGGTGAACTGC+TGG | - | chr1_4:4384061-4384080 | None:intergenic | 50.0% | |
| CTTCTCAAGTAGGTAGCCGA+TGG | - | chr1_4:4384842-4384861 | None:intergenic | 50.0% | |
| ! | GTGAGGGCATGTCATGTTTG+GGG | + | chr1_4:4384874-4384893 | Msa0144830:intron | 50.0% |
| ! | TGAGGGCATGTCATGTTTGG+GGG | + | chr1_4:4384875-4384894 | Msa0144830:intron | 50.0% |
| AAATGGCCATCGTACAAGGG+CGG | - | chr1_4:4385018-4385037 | None:intergenic | 50.0% | |
| CTCTATGCTAAAGCAGCTGG+TGG | + | chr1_4:4385131-4385150 | Msa0144830:CDS | 50.0% | |
| TTCTGCGGCGATGTCTTCGT+CGG | + | chr1_4:4377265-4377284 | Msa0144830:exon | 55.0% | |
| TTTGGGGAGCTATCCTGGAG+TGG | + | chr1_4:4377642-4377661 | Msa0144830:intron | 55.0% | |
| AGGGGTCAACCAAACCACCA+TGG | + | chr1_4:4377950-4377969 | Msa0144830:CDS | 55.0% | |
| CCAGATGCCCTTGGCAAACA+AGG | - | chr1_4:4379397-4379416 | None:intergenic | 55.0% | |
| !! | CCTTGTTTGCCAAGGGCATC+TGG | + | chr1_4:4379394-4379413 | Msa0144830:intron | 55.0% |
| GTCTATACAGTTGCGCGCAG+AGG | - | chr1_4:4380544-4380563 | None:intergenic | 55.0% | |
| GAGAGCTTCGTCACCTACTG+CGG | - | chr1_4:4380589-4380608 | None:intergenic | 55.0% | |
| CTTGGGTTCGAATCCAGCCA+TGG | - | chr1_4:4380638-4380657 | None:intergenic | 55.0% | |
| GGATTCGAACCCAAGACCTC+TGG | + | chr1_4:4380643-4380662 | Msa0144830:intron | 55.0% | |
| CCCAAGACCTCTGGTTAAGC+TGG | + | chr1_4:4380652-4380671 | Msa0144830:intron | 55.0% | |
| !! | CTTCTCTACCCAAGAGCGCT+TGG | - | chr1_4:4380700-4380719 | None:intergenic | 55.0% |
| TGTGGCAGTCTCTTCTCGGA+TGG | + | chr1_4:4382978-4382997 | Msa0144830:intron | 55.0% | |
| !! | CCTGGTGAACTGCTGGTTTG+AGG | - | chr1_4:4384054-4384073 | None:intergenic | 55.0% |
| CCTCAAACCAGCAGTTCACC+AGG | + | chr1_4:4384051-4384070 | Msa0144830:CDS | 55.0% | |
| TGCTATTGCAGCAGCTGCTG+AGG | + | chr1_4:4384276-4384295 | Msa0144830:CDS | 55.0% | |
| AATGGCCATCGTACAAGGGC+GGG | - | chr1_4:4385017-4385036 | None:intergenic | 55.0% | |
| CAGTGGGGTTCCATTTGCCC+TGG | + | chr1_4:4382570-4382589 | Msa0144830:intron | 60.0% | |
| GAGTCGGGTAGGACCGCAGT+AGG | + | chr1_4:4380573-4380592 | Msa0144830:intron | 65.0% | |
| CCATCGTACAAGGGCGGGCA+TGG | - | chr1_4:4385012-4385031 | None:intergenic | 65.0% | |
| CCATGCCCGCCCTTGTACGA+TGG | + | chr1_4:4385009-4385028 | Msa0144830:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 4377049 | 4385184 | 4377049 | ID=Msa0144830;Name=Msa0144830 |
| chr1_4 | mRNA | 4377049 | 4385184 | 4377049 | ID=Msa0144830-mRNA-1;Parent=Msa0144830;Name=Msa0144830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=200|0.9|0.81|0.90|0.9|0.81|11|0|261 |
| chr1_4 | exon | 4377049 | 4377118 | 4377049 | ID=Msa0144830-mRNA-1:exon:1773;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4377145 | 4377361 | 4377145 | ID=Msa0144830-mRNA-1:exon:1774;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4377445 | 4377523 | 4377445 | ID=Msa0144830-mRNA-1:exon:1775;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4377932 | 4377993 | 4377932 | ID=Msa0144830-mRNA-1:exon:1776;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4378232 | 4378292 | 4378232 | ID=Msa0144830-mRNA-1:exon:1777;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4378894 | 4378996 | 4378894 | ID=Msa0144830-mRNA-1:exon:1778;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4379262 | 4379337 | 4379262 | ID=Msa0144830-mRNA-1:exon:1779;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4379710 | 4379805 | 4379710 | ID=Msa0144830-mRNA-1:exon:1780;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4384043 | 4384099 | 4384043 | ID=Msa0144830-mRNA-1:exon:1781;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4384214 | 4384321 | 4384214 | ID=Msa0144830-mRNA-1:exon:1782;Parent=Msa0144830-mRNA-1 |
| chr1_4 | exon | 4385128 | 4385184 | 4385128 | ID=Msa0144830-mRNA-1:exon:1783;Parent=Msa0144830-mRNA-1 |
| chr1_4 | five_prime_UTR | 4377049 | 4377118 | 4377049 | ID=Msa0144830-mRNA-1:five_prime_utr;Parent=Msa0144830-mRNA-1 |
| chr1_4 | five_prime_UTR | 4377145 | 4377274 | 4377145 | ID=Msa0144830-mRNA-1:five_prime_utr;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4377275 | 4377361 | 4377275 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4377445 | 4377523 | 4377445 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4377932 | 4377993 | 4377932 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4378232 | 4378292 | 4378232 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4378894 | 4378996 | 4378894 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4379262 | 4379337 | 4379262 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4379710 | 4379805 | 4379710 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4384043 | 4384099 | 4384043 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4384214 | 4384321 | 4384214 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| chr1_4 | CDS | 4385128 | 4385184 | 4385128 | ID=Msa0144830-mRNA-1:cds;Parent=Msa0144830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
