Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147430 | XP_003589511.1 | 96.863 | 1020 | 32 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2026 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147430 | G7I7R0 | 96.863 | 1020 | 32 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2026 |
Gene ID | Type | Classification |
---|---|---|
Msa0147430 | TR | IWS1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147430 | MtrunA17_Chr1g0156791 | 96.863 | 1020 | 32 | 0 | 1 | 1020 | 1 | 1020 | 0.0 | 2026 |
Msa0147430 | MtrunA17_Chr6g0451341 | 29.842 | 506 | 228 | 29 | 599 | 1020 | 1127 | 1589 | 2.15e-16 | 84.7 |
Msa0147430 | MtrunA17_Chr6g0451341 | 34.667 | 150 | 90 | 5 | 1 | 148 | 254 | 397 | 4.34e-14 | 77.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0147430 | AT4G24200.2 | 39.655 | 580 | 289 | 23 | 472 | 1020 | 451 | 1000 | 1.71e-71 | 257 |
Msa0147430 | AT4G24200.1 | 39.655 | 580 | 289 | 23 | 472 | 1020 | 451 | 1000 | 1.71e-71 | 257 |
Msa0147430 | AT3G48060.1 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.96e-15 | 82.0 |
Msa0147430 | AT3G48060.3 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1135 | 1607 | 1.96e-15 | 82.0 |
Msa0147430 | AT3G48060.2 | 27.976 | 504 | 237 | 25 | 599 | 1007 | 1136 | 1608 | 1.99e-15 | 82.0 |
Msa0147430 | AT3G48050.1 | 27.843 | 510 | 232 | 27 | 599 | 1007 | 1133 | 1607 | 2.92e-15 | 81.6 |
Msa0147430 | AT3G48050.2 | 27.843 | 510 | 232 | 27 | 599 | 1007 | 1133 | 1607 | 2.92e-15 | 81.6 |
Find 252 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGGAGCTGGTGGCGTTTC+AGG | 0.062744 | 1_4:-7387634 | Msa0147430:CDS |
TGCTCCTGCAATATCGATTT+TGG | 0.128104 | 1_4:-7387755 | Msa0147430:CDS |
GAATCTTCAGGCTTGCCTTC+TGG | 0.146600 | 1_4:-7388069 | Msa0147430:CDS |
ATACTTTCAAACTGATTTAC+TGG | 0.187646 | 1_4:-7387836 | Msa0147430:CDS |
AAGAGCATGTTCCTCAAATT+TGG | 0.207541 | 1_4:-7387708 | Msa0147430:CDS |
GGTCACAATGTTAGCGCTTC+TGG | 0.217592 | 1_4:+7388776 | None:intergenic |
GATTCAGGCTTAGGATTTAT+TGG | 0.225150 | 1_4:+7389266 | None:intergenic |
TGTGATAAAGTAATAGTTTC+TGG | 0.230722 | 1_4:-7389140 | Msa0147430:CDS |
TTTGATCTTAATGAAGAATA+TGG | 0.251619 | 1_4:-7388396 | Msa0147430:CDS |
AAGATCAATTTCAGAATTCT+TGG | 0.252778 | 1_4:+7388755 | None:intergenic |
AATAGTGCCTGAATCTTCTT+TGG | 0.260722 | 1_4:-7389195 | Msa0147430:CDS |
AATCTTCAGGCTTGCCTTCT+GGG | 0.262552 | 1_4:-7388068 | Msa0147430:CDS |
CCAGCCATGCTCATAATATA+TGG | 0.269350 | 1_4:+7387412 | None:intergenic |
AAGAAAATCTTGCCTTTGTT+TGG | 0.278777 | 1_4:+7388146 | None:intergenic |
ATGGAGGGGCAGCTCTTCTT+TGG | 0.289224 | 1_4:-7387946 | Msa0147430:CDS |
TCTGAAATTGATCTTGACTA+TGG | 0.312318 | 1_4:-7388747 | Msa0147430:CDS |
TTAACATTAGCAGCCTTATC+TGG | 0.317575 | 1_4:+7389563 | None:intergenic |
TTCAATACTTGAAGAAGATT+TGG | 0.318707 | 1_4:+7387801 | None:intergenic |
TCTTTGGAAGAAATGGCTAT+TGG | 0.327878 | 1_4:-7387930 | Msa0147430:CDS |
TCAAAACCTGCAGAGACTTC+AGG | 0.328158 | 1_4:-7388309 | Msa0147430:CDS |
TCTTCAAGTATTGAAGTATA+TGG | 0.328883 | 1_4:-7387793 | Msa0147430:CDS |
TCTGACATGGAACTTGATTA+TGG | 0.330891 | 1_4:-7388912 | Msa0147430:CDS |
TCCAAGTCAGGGATGCATTC+TGG | 0.341612 | 1_4:+7388483 | None:intergenic |
CTTCAACAATCCTCAAGTTC+AGG | 0.342590 | 1_4:-7387241 | Msa0147430:CDS |
GTCCTTCTAATTGAATAAAA+AGG | 0.346830 | 1_4:+7389999 | None:intergenic |
GGCTCAACAGCCTTGCCATT+TGG | 0.349494 | 1_4:+7387679 | None:intergenic |
GCCGGTTGTCTTCAGTGAAC+GGG | 0.352597 | 1_4:-7389664 | Msa0147430:CDS |
GAAAGTGAATTGACATCGTC+TGG | 0.354075 | 1_4:-7389419 | Msa0147430:CDS |
AAACAAATTGGTGAATCTTC+AGG | 0.355173 | 1_4:-7388081 | Msa0147430:CDS |
AACTCGGGTTTCATTATTGA+TGG | 0.356360 | 1_4:-7387337 | Msa0147430:CDS |
AAAGAAGATTCAGGCACTAT+TGG | 0.361886 | 1_4:+7389197 | None:intergenic |
CAGCTCTTCTTTGGAAGAAA+TGG | 0.365649 | 1_4:-7387937 | Msa0147430:CDS |
AAAGGCCCTCCAGAGAAATT+AGG | 0.368746 | 1_4:-7389293 | Msa0147430:CDS |
ATTGGTGCTCCTAATTTCTC+TGG | 0.369387 | 1_4:+7389284 | None:intergenic |
AGTAAATCAGTTTGAAAGTA+TGG | 0.371763 | 1_4:+7387838 | None:intergenic |
TATTGCAGGAGCATCTGATT+TGG | 0.372446 | 1_4:+7387765 | None:intergenic |
TGAGATTCTTATCAATCATA+TGG | 0.372514 | 1_4:+7389696 | None:intergenic |
CAAATTTGGTCTTTGCCAAA+TGG | 0.377269 | 1_4:-7387694 | Msa0147430:CDS |
GGAAACTTTGCTCTGTTTGA+AGG | 0.378573 | 1_4:+7388797 | None:intergenic |
TCAATAATGTTGGGGCTTGT+CGG | 0.380965 | 1_4:+7388942 | None:intergenic |
GAACTCTTGTCAATAATGTT+GGG | 0.387120 | 1_4:+7388933 | None:intergenic |
GATGAACTGGCAAAACAAAT+TGG | 0.391064 | 1_4:-7388093 | Msa0147430:CDS |
CAGGAGCTGGTGGCGTTTCA+GGG | 0.395704 | 1_4:-7387633 | Msa0147430:CDS |
TCTTTGAAACTTCCTTGTTT+CGG | 0.396161 | 1_4:+7389377 | None:intergenic |
AGCTGGTGGCGTTTCAGGGA+TGG | 0.404802 | 1_4:-7387629 | Msa0147430:CDS |
CTCCGGTAGTACCTCAAGTT+GGG | 0.406048 | 1_4:-7387474 | Msa0147430:CDS |
GACCGTGGTTCATTGATAGA+TGG | 0.406642 | 1_4:-7389979 | Msa0147430:CDS |
AGATGCTAAGTCTCATGATA+TGG | 0.410271 | 1_4:-7389735 | Msa0147430:CDS |
TCATGTTCCAAAGAAGATTC+AGG | 0.415078 | 1_4:+7389188 | None:intergenic |
AAGTCTCATGATATGGATAC+TGG | 0.415945 | 1_4:-7389728 | Msa0147430:CDS |
GAATTAGATTTGAATAGTAT+TGG | 0.417428 | 1_4:-7388003 | Msa0147430:CDS |
GCTGGTGGCGTTTCAGGGAT+GGG | 0.419252 | 1_4:-7387628 | Msa0147430:CDS |
AGGTATCGGTGTTGTAGATA+TGG | 0.420582 | 1_4:+7388344 | None:intergenic |
GAGCAGGAACTAAATGATAA+AGG | 0.420968 | 1_4:-7389311 | Msa0147430:CDS |
AAACTTCCTTGTTTCGGTAC+AGG | 0.423549 | 1_4:+7389383 | None:intergenic |
TTCAGCGGAGTTGCTTTGTC+TGG | 0.423774 | 1_4:+7388557 | None:intergenic |
CCTGAAACGCCACCAGCTCC+TGG | 0.426886 | 1_4:+7387634 | None:intergenic |
GGTACACAGCTTGGTTTAAA+CGG | 0.427299 | 1_4:-7387391 | Msa0147430:CDS |
GTTCATGTGTTGCGACTTGA+TGG | 0.427706 | 1_4:-7389626 | Msa0147430:CDS |
GCACCAACAGAATCAGATTC+AGG | 0.427998 | 1_4:+7389251 | None:intergenic |
CCTCTTGAGTCCACCATGTA+AGG | 0.431827 | 1_4:+7387499 | None:intergenic |
ACAGAATCAGATTCAGGCTT+AGG | 0.433314 | 1_4:+7389257 | None:intergenic |
CCATCCTCTGATCTGAAGGT+TGG | 0.433939 | 1_4:+7387965 | None:intergenic |
TCGCCAGCCGCGTATGGATC+AGG | 0.434737 | 1_4:-7387532 | Msa0147430:CDS |
CATCCTCTGATCTGAAGGTT+GGG | 0.434962 | 1_4:+7387966 | None:intergenic |
CGTCGCCGTGATTAGAAACT+TGG | 0.436512 | 1_4:+7389006 | None:intergenic |
ACTTTGACTGAGATGAAAGA+TGG | 0.442066 | 1_4:-7390169 | Msa0147430:CDS |
GCCACTGTAAGTAACCTTCT+TGG | 0.442723 | 1_4:-7389827 | Msa0147430:CDS |
GGCAATCCTGAAGTCTCTGC+AGG | 0.443638 | 1_4:+7388303 | None:intergenic |
AGAACTCTTGTCAATAATGT+TGG | 0.444898 | 1_4:+7388932 | None:intergenic |
CAGCCATGCTCATAATATAT+GGG | 0.450624 | 1_4:+7387413 | None:intergenic |
CACAACCCCTTCTCGAGTGC+AGG | 0.453974 | 1_4:-7390143 | Msa0147430:CDS |
TTTGACAAGTGGAAAGAAGT+TGG | 0.454663 | 1_4:-7389764 | Msa0147430:CDS |
GGGGCTGAGCGTAAGATGAT+AGG | 0.457202 | 1_4:+7387434 | None:intergenic |
AGAACAGAGCTATGGAAGAT+AGG | 0.458167 | 1_4:-7387267 | Msa0147430:CDS |
AACTGCGAATACTCCAAGTC+AGG | 0.458738 | 1_4:+7388471 | None:intergenic |
AAGTGGAAAGAAGTTGGAAA+TGG | 0.459088 | 1_4:-7389758 | Msa0147430:CDS |
CCCTCCATCCTCTGATCTGA+AGG | 0.465251 | 1_4:+7387961 | None:intergenic |
GCCAGAATGCATCCCTGACT+TGG | 0.466600 | 1_4:-7388484 | Msa0147430:CDS |
GAAGGAATCAGAACTATTTG+AGG | 0.468412 | 1_4:+7388815 | None:intergenic |
TCCCAACTTTGATCTTAACT+CGG | 0.470352 | 1_4:-7387353 | Msa0147430:CDS |
ACCCGAGTTAAGATCAAAGT+TGG | 0.470545 | 1_4:+7387351 | None:intergenic |
TGCTGATGTTTGTAGCCAAA+TGG | 0.472264 | 1_4:+7387169 | None:intergenic |
GGTTGGGAAACATATCCATT+TGG | 0.474328 | 1_4:-7387184 | Msa0147430:CDS |
CTACAGTTTGAAGGAACGCT+TGG | 0.475273 | 1_4:-7388270 | Msa0147430:CDS |
ACAGCCCCTCTACAGTTTGA+AGG | 0.475325 | 1_4:-7388279 | Msa0147430:CDS |
GTTTCCCAACCGCTACCATC+TGG | 0.477770 | 1_4:+7387196 | None:intergenic |
TCATTTAACTGTAAATCATC+AGG | 0.478423 | 1_4:+7389350 | None:intergenic |
TTCAACAATCCTCAAGTTCA+GGG | 0.479017 | 1_4:-7387240 | Msa0147430:CDS |
ACTGAAGCTTTAGATAGTTG+TGG | 0.480850 | 1_4:+7389047 | None:intergenic |
ATTGCTAGAATCTGTGGCTC+TGG | 0.481896 | 1_4:+7389070 | None:intergenic |
CCATATATTATGAGCATGGC+TGG | 0.483020 | 1_4:-7387412 | Msa0147430:CDS |
AAAAGAATCAGAGCCATTTG+AGG | 0.484474 | 1_4:+7388980 | None:intergenic |
TTGAATAGTATTGGTGATGA+TGG | 0.487137 | 1_4:-7387994 | Msa0147430:CDS |
TCTTGCTCTATCTTGAACCT+TGG | 0.489350 | 1_4:+7389793 | None:intergenic |
AGTGAGAAGCTAATTTCATC+AGG | 0.491477 | 1_4:-7389857 | Msa0147430:CDS |
TTTGGCAAAGACCAAATTTG+AGG | 0.492121 | 1_4:+7387697 | None:intergenic |
CTGAACTTGAGGATTGTTGA+AGG | 0.492765 | 1_4:+7387242 | None:intergenic |
ACTGAAGCAGCTCAAGATCC+AGG | 0.493389 | 1_4:-7388447 | Msa0147430:CDS |
AAGAAGATTTGGTAGGCCCT+TGG | 0.495044 | 1_4:+7387812 | None:intergenic |
GGCACTATTGGTGCAGGCAC+AGG | 0.495570 | 1_4:+7389209 | None:intergenic |
CAGCTTGGTTTAAACGGTGT+TGG | 0.495798 | 1_4:-7387385 | Msa0147430:CDS |
CGGGTTTCATTATTGATGGC+GGG | 0.497128 | 1_4:-7387333 | Msa0147430:CDS |
GGCCGGTTGTCTTCAGTGAA+CGG | 0.498443 | 1_4:-7389665 | Msa0147430:CDS |
AGCATGGCTGGTACACAGCT+TGG | 0.499968 | 1_4:-7387400 | Msa0147430:CDS |
CTTTGTCTGGATGACACCTC+GGG | 0.502499 | 1_4:+7388570 | None:intergenic |
TCCACTGATGATTGCCCAGA+AGG | 0.506454 | 1_4:+7388054 | None:intergenic |
CAGAAGAATGTTTCTGCTGG+TGG | 0.507286 | 1_4:-7388183 | Msa0147430:CDS |
CTTATCAATGAAGGAGGAGC+AGG | 0.507424 | 1_4:-7389327 | Msa0147430:CDS |
CTTTGACTGAGATGAAAGAT+GGG | 0.510506 | 1_4:-7390168 | Msa0147430:CDS |
CCCCGTTCACTGAAGACAAC+CGG | 0.510539 | 1_4:+7389663 | None:intergenic |
GCCACCAACCCCTGAACTTG+AGG | 0.517663 | 1_4:+7387231 | None:intergenic |
CCCAACTTTGATCTTAACTC+GGG | 0.520919 | 1_4:-7387352 | Msa0147430:CDS |
TGGCGATGCAATAAGACAAT+GGG | 0.521998 | 1_4:-7390071 | Msa0147430:CDS |
GCGTTCCTTCAAACTGTAGA+GGG | 0.522910 | 1_4:+7388274 | None:intergenic |
CCACCTGATCCATACGCGGC+TGG | 0.523562 | 1_4:+7387529 | None:intergenic |
CCAACTCCTGCACTCGAGAA+GGG | 0.524276 | 1_4:+7390137 | None:intergenic |
GGTGCTCCTAATTTCTCTGG+AGG | 0.525103 | 1_4:+7389287 | None:intergenic |
GTTAAATGACTTATCAATGA+AGG | 0.527736 | 1_4:-7389336 | Msa0147430:CDS |
TTGGTCTTTGCCAAATGGCA+AGG | 0.528902 | 1_4:-7387689 | Msa0147430:CDS |
GTAAGATGATAGGACATTTG+AGG | 0.529359 | 1_4:+7387444 | None:intergenic |
AAGGAACGCTTGGATGGAAA+GGG | 0.529359 | 1_4:-7388260 | Msa0147430:CDS |
GCTGGCAGCGCGGAATCTGT+TGG | 0.530424 | 1_4:-7388621 | Msa0147430:CDS |
GAAGCAGAGACAACAGGTAT+CGG | 0.532277 | 1_4:+7388330 | None:intergenic |
ACATTCATATGCCTTTCCTC+AGG | 0.532717 | 1_4:+7388528 | None:intergenic |
GAAGGTGGAACGAGGCAAGC+TGG | 0.534105 | 1_4:-7388639 | Msa0147430:CDS |
CACGGCGACGATACCTCAAA+TGG | 0.534538 | 1_4:-7388993 | Msa0147430:CDS |
TTCATGTGTTGCGACTTGAT+GGG | 0.534678 | 1_4:-7389625 | Msa0147430:CDS |
GCTCCGGTAGTACCTCAAGT+TGG | 0.535810 | 1_4:-7387475 | Msa0147430:CDS |
TCCTCAAGTTCAGGGGTTGG+TGG | 0.537669 | 1_4:-7387232 | Msa0147430:CDS |
TGATGCAGGACGAAAGGCAC+TGG | 0.538116 | 1_4:+7388227 | None:intergenic |
ACGAAAGGCACTGGTGGCAG+CGG | 0.538807 | 1_4:+7388236 | None:intergenic |
GAAGGAACGCTTGGATGGAA+AGG | 0.538921 | 1_4:-7388261 | Msa0147430:CDS |
ACCAACTCCTGCACTCGAGA+AGG | 0.540838 | 1_4:+7390136 | None:intergenic |
AGAACCAGATGGTAGCGGTT+GGG | 0.543187 | 1_4:-7387200 | Msa0147430:CDS |
GGTGGACTCAAGAGGAGCTC+CGG | 0.543800 | 1_4:-7387491 | Msa0147430:CDS |
CCCTTCTCGAGTGCAGGAGT+TGG | 0.544889 | 1_4:-7390137 | Msa0147430:CDS |
GAATGATTGTAGGATACCGC+AGG | 0.545072 | 1_4:+7387604 | None:intergenic |
GTGCTCCTAATTTCTCTGGA+GGG | 0.547044 | 1_4:+7389288 | None:intergenic |
GCCTTCTGGGCAATCATCAG+TGG | 0.549027 | 1_4:-7388055 | Msa0147430:CDS |
AGCTAATTTCATCAGGAATG+TGG | 0.552057 | 1_4:-7389850 | Msa0147430:CDS |
GATTCAGGCACTATTGGTGC+AGG | 0.552270 | 1_4:+7389203 | None:intergenic |
GCTTTGTCTGGATGACACCT+CGG | 0.553283 | 1_4:+7388569 | None:intergenic |
AGTTTGAAGGAACGCTTGGA+TGG | 0.554006 | 1_4:-7388266 | Msa0147430:CDS |
AACTCTTGTCAATAATGTTG+GGG | 0.554203 | 1_4:+7388934 | None:intergenic |
AAACTGATTTACTGGACCAA+GGG | 0.555008 | 1_4:-7387828 | Msa0147430:CDS |
TGTCAATTCACTTTCACTTG+AGG | 0.555058 | 1_4:+7389427 | None:intergenic |
CCCGAGTTAAGATCAAAGTT+GGG | 0.555258 | 1_4:+7387352 | None:intergenic |
GATGATGATGATGCAGGTGA+TGG | 0.557736 | 1_4:+7387904 | None:intergenic |
AGGTGGTACAGTTCCTTACA+TGG | 0.559099 | 1_4:-7387512 | Msa0147430:CDS |
AGATACTCAGATACCAGATA+AGG | 0.560646 | 1_4:-7389576 | Msa0147430:CDS |
TTCCTCAGGACATGCTTCAG+CGG | 0.561075 | 1_4:+7388542 | None:intergenic |
CCTTCAGATCAGAGGATGGA+GGG | 0.561916 | 1_4:-7387961 | Msa0147430:CDS |
AAGTCAAAACAGTAGTAAGA+TGG | 0.561949 | 1_4:+7389468 | None:intergenic |
AAATCAATGTTTCGAACTGA+CGG | 0.562322 | 1_4:+7387871 | None:intergenic |
AAAGCTTCAGTGGAGGAAGA+AGG | 0.562681 | 1_4:-7389035 | Msa0147430:CDS |
TCTGGATGACACCTCGGGTA+GGG | 0.563962 | 1_4:+7388575 | None:intergenic |
CTTACAATGATGCCAGGAGC+TGG | 0.565275 | 1_4:-7387646 | Msa0147430:CDS |
TCTTCAGAGAAAAGCTCAGA+AGG | 0.565440 | 1_4:-7388657 | Msa0147430:CDS |
AAGAACCAGATGGTAGCGGT+TGG | 0.566058 | 1_4:-7387201 | Msa0147430:CDS |
GTTAAGATCAAAGTTGGGAC+GGG | 0.566742 | 1_4:+7387357 | None:intergenic |
CATTAAGATCAAAGGTGCAA+AGG | 0.568125 | 1_4:+7388406 | None:intergenic |
TCCGGTAGTACCTCAAGTTG+GGG | 0.568757 | 1_4:-7387473 | Msa0147430:CDS |
GCTAATTTCATCAGGAATGT+GGG | 0.570539 | 1_4:-7389849 | Msa0147430:CDS |
AAGCCTGAATCTGATTCTGT+TGG | 0.570811 | 1_4:-7389254 | Msa0147430:CDS |
ACAACTATCTAAAGCTTCAG+TGG | 0.571210 | 1_4:-7389045 | Msa0147430:CDS |
AACAGCCAAGTTTCTAATCA+CGG | 0.572080 | 1_4:-7389011 | Msa0147430:CDS |
ATAGAGATGCATTGACTGCA+AGG | 0.572735 | 1_4:-7387309 | Msa0147430:CDS |
TCCTGGTCAGAACAGAGCTA+TGG | 0.573956 | 1_4:-7387275 | Msa0147430:CDS |
TTCACAATTCAAACTTGCAG+AGG | 0.574128 | 1_4:+7389511 | None:intergenic |
ATACTTGAAGAAGATTTGGT+AGG | 0.576252 | 1_4:+7387805 | None:intergenic |
ATATTCTTCATTAAGATCAA+AGG | 0.576467 | 1_4:+7388398 | None:intergenic |
CTGAAGCATGTCCTGAGGAA+AGG | 0.576650 | 1_4:-7388539 | Msa0147430:CDS |
CAACTCCTGCACTCGAGAAG+GGG | 0.576939 | 1_4:+7390138 | None:intergenic |
TCATGTGTTGCGACTTGATG+GGG | 0.577454 | 1_4:-7389624 | Msa0147430:CDS |
TCTTGGTCATCACAGCTCCA+AGG | 0.578227 | 1_4:-7389810 | Msa0147430:CDS |
GTTGGTCTCTGTGATGAAGA+AGG | 0.579660 | 1_4:-7390119 | Msa0147430:CDS |
CAATCCTCAAGTTCAGGGGT+TGG | 0.580162 | 1_4:-7387235 | Msa0147430:CDS |
CAAGAGCACTATTTGACAAG+TGG | 0.581259 | 1_4:-7389775 | Msa0147430:CDS |
ACGAGGTGATGCAGGACGAA+AGG | 0.582185 | 1_4:+7388221 | None:intergenic |
GTAGATCTTACAATGATGCC+AGG | 0.582215 | 1_4:-7387652 | Msa0147430:CDS |
ATCATTGTAAGATCTACTGC+AGG | 0.583726 | 1_4:+7387658 | None:intergenic |
AGCCATGCTCATAATATATG+GGG | 0.584863 | 1_4:+7387414 | None:intergenic |
AGAATCTCAAGGAGGAAGGC+CGG | 0.587806 | 1_4:-7389682 | Msa0147430:CDS |
TCCATAGCTCTGTTCTGACC+AGG | 0.588974 | 1_4:+7387274 | None:intergenic |
AGAAGAATGTTTCTGCTGGT+GGG | 0.590816 | 1_4:-7388182 | Msa0147430:CDS |
CAAACTGATTTACTGGACCA+AGG | 0.591390 | 1_4:-7387829 | Msa0147430:CDS |
AACTTACCTGTACCGAAACA+AGG | 0.592075 | 1_4:-7389389 | Msa0147430:CDS |
TCGGGTTTCATTATTGATGG+CGG | 0.592933 | 1_4:-7387334 | Msa0147430:CDS |
TGAACTTGAGGATTGTTGAA+GGG | 0.595658 | 1_4:+7387243 | None:intergenic |
TCAAACTGTAGAGGGGCTGT+TGG | 0.595682 | 1_4:+7388282 | None:intergenic |
AGATCAAAGTTGGGACGGGA+AGG | 0.596681 | 1_4:+7387361 | None:intergenic |
AGTTAAGATCAAAGTTGGGA+CGG | 0.597365 | 1_4:+7387356 | None:intergenic |
CTGGCGATGCAATAAGACAA+TGG | 0.600185 | 1_4:-7390072 | Msa0147430:CDS |
GACAGTATTGTGAAGAACAC+TGG | 0.602791 | 1_4:-7390091 | Msa0147430:CDS |
CTTCAGATCAGAGGATGGAG+GGG | 0.606319 | 1_4:-7387960 | Msa0147430:CDS |
TTGTGGATTGCTAGAATCTG+TGG | 0.608879 | 1_4:+7389064 | None:intergenic |
ACTCTGATATTTCCAAACAA+AGG | 0.612301 | 1_4:-7388158 | Msa0147430:CDS |
GATAAGAATCTCAAGGAGGA+AGG | 0.612996 | 1_4:-7389686 | Msa0147430:CDS |
CCTTACATGGTGGACTCAAG+AGG | 0.614111 | 1_4:-7387499 | Msa0147430:CDS |
ACTGCGAATACTCCAAGTCA+GGG | 0.618881 | 1_4:+7388472 | None:intergenic |
TATGATTGATAAGAATCTCA+AGG | 0.619192 | 1_4:-7389693 | Msa0147430:CDS |
ATTGACGATGATGATGATGC+AGG | 0.619401 | 1_4:+7387898 | None:intergenic |
AATCAGAAGAATGTTTCTGC+TGG | 0.619736 | 1_4:-7388186 | Msa0147430:CDS |
ATGATGATGATGCAGGTGAT+GGG | 0.621753 | 1_4:+7387905 | None:intergenic |
TCAGAGAAAAGCTCAGAAGG+TGG | 0.622813 | 1_4:-7388654 | Msa0147430:CDS |
AGCGTTCCTTCAAACTGTAG+AGG | 0.623038 | 1_4:+7388273 | None:intergenic |
ACAATGATGCCAGGAGCTGG+TGG | 0.623886 | 1_4:-7387643 | Msa0147430:CDS |
GTCTGGATGACACCTCGGGT+AGG | 0.626282 | 1_4:+7388574 | None:intergenic |
GATAAAATGAGTGTGGTGGT+TGG | 0.626781 | 1_4:-7389095 | Msa0147430:CDS |
TATTGACAAGAGTTCTGACA+TGG | 0.626964 | 1_4:-7388925 | Msa0147430:CDS |
CTCTGATAAAATGAGTGTGG+TGG | 0.631503 | 1_4:-7389099 | Msa0147430:CDS |
AGAAAAGAACCAGATGGTAG+CGG | 0.632014 | 1_4:-7387205 | Msa0147430:CDS |
TGCAGGACGAAAGGCACTGG+TGG | 0.633312 | 1_4:+7388230 | None:intergenic |
CCAACCTTCAGATCAGAGGA+TGG | 0.635017 | 1_4:-7387965 | Msa0147430:CDS |
ACCTTCAGATCAGAGGATGG+AGG | 0.636818 | 1_4:-7387962 | Msa0147430:CDS |
AAAGTGAATTGACATCGTCT+GGG | 0.640193 | 1_4:-7389418 | Msa0147430:CDS |
ACCAAGAAGGTTACTTACAG+TGG | 0.640251 | 1_4:+7389826 | None:intergenic |
AATTGATCTTGACTATGGCA+TGG | 0.644950 | 1_4:-7388742 | Msa0147430:CDS |
CCTTGCATGTTCCCTACCCG+AGG | 0.646133 | 1_4:-7388586 | Msa0147430:CDS |
AAATGACTTATCAATGAAGG+AGG | 0.646852 | 1_4:-7389333 | Msa0147430:CDS |
TGGTACAAATGATAGTGTCA+TGG | 0.647688 | 1_4:-7389930 | Msa0147430:CDS |
TTTGATCTGAATGTGGCTGG+GGG | 0.649877 | 1_4:-7388120 | Msa0147430:CDS |
TCAACAATCCTCAAGTTCAG+GGG | 0.649996 | 1_4:-7387239 | Msa0147430:CDS |
CTCCGCTGAAGCATGTCCTG+AGG | 0.650146 | 1_4:-7388544 | Msa0147430:CDS |
TGGAGCTGTGATGACCAAGA+AGG | 0.654122 | 1_4:+7389813 | None:intergenic |
CCGGTTGTCTTCAGTGAACG+GGG | 0.654576 | 1_4:-7389663 | Msa0147430:CDS |
GGCAAAAGAAAAGAACCAGA+TGG | 0.656215 | 1_4:-7387211 | Msa0147430:CDS |
TTATTCAATTAGAAGGACCG+TGG | 0.658634 | 1_4:-7389994 | Msa0147430:CDS |
ATACCCAACCTTCAGATCAG+AGG | 0.660327 | 1_4:-7387969 | Msa0147430:CDS |
AACATCAGCAACAACCTCCG+TGG | 0.660346 | 1_4:-7387156 | Msa0147430:CDS |
ATATATTAGAGCTACTTCCA+CGG | 0.662581 | 1_4:+7387139 | None:intergenic |
ACTATCTAAAGCTTCAGTGG+AGG | 0.665990 | 1_4:-7389042 | Msa0147430:CDS |
CCAGCCGCGTATGGATCAGG+TGG | 0.671996 | 1_4:-7387529 | Msa0147430:CDS |
CGTTTCAGGGATGGGCCCTG+CGG | 0.673116 | 1_4:-7387620 | Msa0147430:CDS |
TGTTACTCGACAAGTTGCTG+AGG | 0.676912 | 1_4:-7388871 | Msa0147430:CDS |
AATGATTGTAGGATACCGCA+GGG | 0.677137 | 1_4:+7387605 | None:intergenic |
CATGTGTTGCGACTTGATGG+GGG | 0.679602 | 1_4:-7389623 | Msa0147430:CDS |
CGTTCCTTCAAACTGTAGAG+GGG | 0.681833 | 1_4:+7388275 | None:intergenic |
GCCATGCTCATAATATATGG+GGG | 0.686789 | 1_4:+7387415 | None:intergenic |
TGCCTCTGATAAAATGAGTG+TGG | 0.687179 | 1_4:-7389102 | Msa0147430:CDS |
CCTCGGGTAGGGAACATGCA+AGG | 0.689926 | 1_4:+7388586 | None:intergenic |
AGTCGCTAGACAAGTTGCTG+AGG | 0.692831 | 1_4:-7388706 | Msa0147430:CDS |
TGTACCACCTGATCCATACG+CGG | 0.695609 | 1_4:+7387525 | None:intergenic |
AAAGCTCAGAAGGTGGAACG+AGG | 0.698086 | 1_4:-7388647 | Msa0147430:CDS |
AACGAGGCAAGCTGGCAGCG+CGG | 0.702174 | 1_4:-7388631 | Msa0147430:CDS |
AACCATCTATCAATGAACCA+CGG | 0.715390 | 1_4:+7389977 | None:intergenic |
TGGTACAGTTCCTTACATGG+TGG | 0.722506 | 1_4:-7387509 | Msa0147430:CDS |
CCGGTAGTACCTCAAGTTGG+GGG | 0.731940 | 1_4:-7387472 | Msa0147430:CDS |
GATTGATAAGAATCTCAAGG+AGG | 0.757896 | 1_4:-7389690 | Msa0147430:CDS |
TATTAGAGCTACTTCCACGG+AGG | 0.760756 | 1_4:+7387142 | None:intergenic |
GAAGCAGCTCAAGATCCAGG+AGG | 0.773089 | 1_4:-7388444 | Msa0147430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATGATGCTCAAAAATT+GGG | - | chr1_4:7387384-7387403 | Msa0147430:CDS | 20.0% |
!! | ATATTCTTCATTAAGATCAA+AGG | + | chr1_4:7388945-7388964 | None:intergenic | 20.0% |
!! | TTTGATCTTAATGAAGAATA+TGG | - | chr1_4:7388944-7388963 | Msa0147430:CDS | 20.0% |
!! | GAATTAGATTTGAATAGTAT+TGG | - | chr1_4:7389337-7389356 | Msa0147430:CDS | 20.0% |
!!! | TACAATCATTCAACTTTTTT+GGG | - | chr1_4:7389748-7389767 | Msa0147430:CDS | 20.0% |
! | CTAATTGAATAAAAAGGTCA+AGG | + | chr1_4:7387338-7387357 | None:intergenic | 25.0% |
!! | GACCTTTTTATTCAATTAGA+AGG | - | chr1_4:7387339-7387358 | Msa0147430:CDS | 25.0% |
! | GTCCTTCTAATTGAATAAAA+AGG | + | chr1_4:7387344-7387363 | None:intergenic | 25.0% |
! | GTTAAATGATGCTCAAAAAT+TGG | - | chr1_4:7387383-7387402 | Msa0147430:CDS | 25.0% |
! | TGAGATTCTTATCAATCATA+TGG | + | chr1_4:7387647-7387666 | None:intergenic | 25.0% |
! | TATGATTGATAAGAATCTCA+AGG | - | chr1_4:7387647-7387666 | Msa0147430:CDS | 25.0% |
! | TCATTTAACTGTAAATCATC+AGG | + | chr1_4:7387993-7388012 | None:intergenic | 25.0% |
! | GTTAAATGACTTATCAATGA+AGG | - | chr1_4:7388004-7388023 | Msa0147430:CDS | 25.0% |
! | TGTGATAAAGTAATAGTTTC+TGG | - | chr1_4:7388200-7388219 | Msa0147430:CDS | 25.0% |
! | AAGATCAATTTCAGAATTCT+TGG | + | chr1_4:7388588-7388607 | None:intergenic | 25.0% |
!! | CAAATCTCTTTGATCTTTTA+GGG | + | chr1_4:7389318-7389337 | None:intergenic | 25.0% |
!! | TCAAATCTCTTTGATCTTTT+AGG | + | chr1_4:7389319-7389338 | None:intergenic | 25.0% |
! | AGTAAATCAGTTTGAAAGTA+TGG | + | chr1_4:7389505-7389524 | None:intergenic | 25.0% |
!! | ATACTTTCAAACTGATTTAC+TGG | - | chr1_4:7389504-7389523 | Msa0147430:CDS | 25.0% |
! | TTCAATACTTGAAGAAGATT+TGG | + | chr1_4:7389542-7389561 | None:intergenic | 25.0% |
!!! | TCTTCAAGTATTGAAGTATA+TGG | - | chr1_4:7389547-7389566 | Msa0147430:CDS | 25.0% |
! | CAAAAAAGTTGAATGATTGT+AGG | + | chr1_4:7389749-7389768 | None:intergenic | 25.0% |
!!! | CTACAATCATTCAACTTTTT+TGG | - | chr1_4:7389747-7389766 | Msa0147430:CDS | 25.0% |
!!! | TCAACTTTTTTGGGATATAA+TGG | - | chr1_4:7389757-7389776 | Msa0147430:CDS | 25.0% |
AAGTCAAAACAGTAGTAAGA+TGG | + | chr1_4:7387875-7387894 | None:intergenic | 30.0% | |
!! | TCTTTGAAACTTCCTTGTTT+CGG | + | chr1_4:7387966-7387985 | None:intergenic | 30.0% |
AAATGACTTATCAATGAAGG+AGG | - | chr1_4:7388007-7388026 | Msa0147430:CDS | 30.0% | |
AACTCTTGTCAATAATGTTG+GGG | + | chr1_4:7388409-7388428 | None:intergenic | 30.0% | |
GAACTCTTGTCAATAATGTT+GGG | + | chr1_4:7388410-7388429 | None:intergenic | 30.0% | |
AGAACTCTTGTCAATAATGT+TGG | + | chr1_4:7388411-7388430 | None:intergenic | 30.0% | |
! | TCTGAAATTGATCTTGACTA+TGG | - | chr1_4:7388593-7388612 | Msa0147430:CDS | 30.0% |
! | TGATTATCAGCATTTTTACG+AGG | + | chr1_4:7389139-7389158 | None:intergenic | 30.0% |
ACTCTGATATTTCCAAACAA+AGG | - | chr1_4:7389182-7389201 | Msa0147430:CDS | 30.0% | |
AAGAAAATCTTGCCTTTGTT+TGG | + | chr1_4:7389197-7389216 | None:intergenic | 30.0% | |
!! | TCTTGATTTTGATCTGAATG+TGG | - | chr1_4:7389213-7389232 | Msa0147430:CDS | 30.0% |
AAACAAATTGGTGAATCTTC+AGG | - | chr1_4:7389259-7389278 | Msa0147430:CDS | 30.0% | |
!! | TTGAATAGTATTGGTGATGA+TGG | - | chr1_4:7389346-7389365 | Msa0147430:CDS | 30.0% |
AAATCAATGTTTCGAACTGA+CGG | + | chr1_4:7389472-7389491 | None:intergenic | 30.0% | |
! | ATACTTGAAGAAGATTTGGT+AGG | + | chr1_4:7389538-7389557 | None:intergenic | 30.0% |
ACTTTGACTGAGATGAAAGA+TGG | - | chr1_4:7387171-7387190 | Msa0147430:CDS | 35.0% | |
CTTTGACTGAGATGAAAGAT+GGG | - | chr1_4:7387172-7387191 | Msa0147430:CDS | 35.0% | |
TTATTCAATTAGAAGGACCG+TGG | - | chr1_4:7387346-7387365 | Msa0147430:CDS | 35.0% | |
AACCATCTATCAATGAACCA+CGG | + | chr1_4:7387366-7387385 | None:intergenic | 35.0% | |
AATGATGCTCAAAAATTGGG+TGG | - | chr1_4:7387387-7387406 | Msa0147430:CDS | 35.0% | |
! | TGGTACAAATGATAGTGTCA+TGG | - | chr1_4:7387410-7387429 | Msa0147430:CDS | 35.0% |
AGTGAGAAGCTAATTTCATC+AGG | - | chr1_4:7387483-7387502 | Msa0147430:CDS | 35.0% | |
AGCTAATTTCATCAGGAATG+TGG | - | chr1_4:7387490-7387509 | Msa0147430:CDS | 35.0% | |
GCTAATTTCATCAGGAATGT+GGG | - | chr1_4:7387491-7387510 | Msa0147430:CDS | 35.0% | |
TTTGACAAGTGGAAAGAAGT+TGG | - | chr1_4:7387576-7387595 | Msa0147430:CDS | 35.0% | |
AAGTGGAAAGAAGTTGGAAA+TGG | - | chr1_4:7387582-7387601 | Msa0147430:CDS | 35.0% | |
AGATGCTAAGTCTCATGATA+TGG | - | chr1_4:7387605-7387624 | Msa0147430:CDS | 35.0% | |
AAGTCTCATGATATGGATAC+TGG | - | chr1_4:7387612-7387631 | Msa0147430:CDS | 35.0% | |
GATTGATAAGAATCTCAAGG+AGG | - | chr1_4:7387650-7387669 | Msa0147430:CDS | 35.0% | |
AGATACTCAGATACCAGATA+AGG | - | chr1_4:7387764-7387783 | Msa0147430:CDS | 35.0% | |
! | TTAACATTAGCAGCCTTATC+TGG | + | chr1_4:7387780-7387799 | None:intergenic | 35.0% |
TTCACAATTCAAACTTGCAG+AGG | + | chr1_4:7387832-7387851 | None:intergenic | 35.0% | |
TGTCAATTCACTTTCACTTG+AGG | + | chr1_4:7387916-7387935 | None:intergenic | 35.0% | |
AAAGTGAATTGACATCGTCT+GGG | - | chr1_4:7387922-7387941 | Msa0147430:CDS | 35.0% | |
GAGCAGGAACTAAATGATAA+AGG | - | chr1_4:7388029-7388048 | Msa0147430:CDS | 35.0% | |
GATTCAGGCTTAGGATTTAT+TGG | + | chr1_4:7388077-7388096 | None:intergenic | 35.0% | |
AAAGAAGATTCAGGCACTAT+TGG | + | chr1_4:7388146-7388165 | None:intergenic | 35.0% | |
AATAGTGCCTGAATCTTCTT+TGG | - | chr1_4:7388145-7388164 | Msa0147430:CDS | 35.0% | |
TCATGTTCCAAAGAAGATTC+AGG | + | chr1_4:7388155-7388174 | None:intergenic | 35.0% | |
!! | ACTGAAGCTTTAGATAGTTG+TGG | + | chr1_4:7388296-7388315 | None:intergenic | 35.0% |
! | ACAACTATCTAAAGCTTCAG+TGG | - | chr1_4:7388295-7388314 | Msa0147430:CDS | 35.0% |
AACAGCCAAGTTTCTAATCA+CGG | - | chr1_4:7388329-7388348 | Msa0147430:CDS | 35.0% | |
AAAAGAATCAGAGCCATTTG+AGG | + | chr1_4:7388363-7388382 | None:intergenic | 35.0% | |
! | TATTGACAAGAGTTCTGACA+TGG | - | chr1_4:7388415-7388434 | Msa0147430:CDS | 35.0% |
TCTGACATGGAACTTGATTA+TGG | - | chr1_4:7388428-7388447 | Msa0147430:CDS | 35.0% | |
GAAGGAATCAGAACTATTTG+AGG | + | chr1_4:7388528-7388547 | None:intergenic | 35.0% | |
AATTGATCTTGACTATGGCA+TGG | - | chr1_4:7388598-7388617 | Msa0147430:CDS | 35.0% | |
! | CATTAAGATCAAAGGTGCAA+AGG | + | chr1_4:7388937-7388956 | None:intergenic | 35.0% |
! | AATCAGAAGAATGTTTCTGC+TGG | - | chr1_4:7389154-7389173 | Msa0147430:CDS | 35.0% |
!! | ATTTTGATCTGAATGTGGCT+GGG | - | chr1_4:7389218-7389237 | Msa0147430:CDS | 35.0% |
GATGAACTGGCAAAACAAAT+TGG | - | chr1_4:7389247-7389266 | Msa0147430:CDS | 35.0% | |
! | TCTTTGGAAGAAATGGCTAT+TGG | - | chr1_4:7389410-7389429 | Msa0147430:CDS | 35.0% |
! | AAACTGATTTACTGGACCAA+GGG | - | chr1_4:7389512-7389531 | Msa0147430:CDS | 35.0% |
! | AAGAGCATGTTCCTCAAATT+TGG | - | chr1_4:7389632-7389651 | Msa0147430:CDS | 35.0% |
TTTGGCAAAGACCAAATTTG+AGG | + | chr1_4:7389646-7389665 | None:intergenic | 35.0% | |
! | CAAATTTGGTCTTTGCCAAA+TGG | - | chr1_4:7389646-7389665 | Msa0147430:CDS | 35.0% |
ATCATTGTAAGATCTACTGC+AGG | + | chr1_4:7389685-7389704 | None:intergenic | 35.0% | |
GTAAGATGATAGGACATTTG+AGG | + | chr1_4:7389899-7389918 | None:intergenic | 35.0% | |
AGCCATGCTCATAATATATG+GGG | + | chr1_4:7389929-7389948 | None:intergenic | 35.0% | |
CAGCCATGCTCATAATATAT+GGG | + | chr1_4:7389930-7389949 | None:intergenic | 35.0% | |
AGTTAAGATCAAAGTTGGGA+CGG | + | chr1_4:7389987-7390006 | None:intergenic | 35.0% | |
TCCCAACTTTGATCTTAACT+CGG | - | chr1_4:7389987-7390006 | Msa0147430:CDS | 35.0% | |
AACTCGGGTTTCATTATTGA+TGG | - | chr1_4:7390003-7390022 | Msa0147430:CDS | 35.0% | |
TTCTGACCAGGAAAGAAAAA+CGG | + | chr1_4:7390057-7390076 | None:intergenic | 35.0% | |
TGAACTTGAGGATTGTTGAA+GGG | + | chr1_4:7390100-7390119 | None:intergenic | 35.0% | |
TTCAACAATCCTCAAGTTCA+GGG | - | chr1_4:7390100-7390119 | Msa0147430:CDS | 35.0% | |
GACAGTATTGTGAAGAACAC+TGG | - | chr1_4:7387249-7387268 | Msa0147430:CDS | 40.0% | |
TGGCGATGCAATAAGACAAT+GGG | - | chr1_4:7387269-7387288 | Msa0147430:CDS | 40.0% | |
ACCAAGAAGGTTACTTACAG+TGG | + | chr1_4:7387517-7387536 | None:intergenic | 40.0% | |
TCTTGCTCTATCTTGAACCT+TGG | + | chr1_4:7387550-7387569 | None:intergenic | 40.0% | |
!! | CAAGAGCACTATTTGACAAG+TGG | - | chr1_4:7387565-7387584 | Msa0147430:CDS | 40.0% |
GATAAGAATCTCAAGGAGGA+AGG | - | chr1_4:7387654-7387673 | Msa0147430:CDS | 40.0% | |
TTCATGTGTTGCGACTTGAT+GGG | - | chr1_4:7387715-7387734 | Msa0147430:CDS | 40.0% | |
GAAAGTGAATTGACATCGTC+TGG | - | chr1_4:7387921-7387940 | Msa0147430:CDS | 40.0% | |
AACTTACCTGTACCGAAACA+AGG | - | chr1_4:7387951-7387970 | Msa0147430:CDS | 40.0% | |
! | AAACTTCCTTGTTTCGGTAC+AGG | + | chr1_4:7387960-7387979 | None:intergenic | 40.0% |
! | ATTGGTGCTCCTAATTTCTC+TGG | + | chr1_4:7388059-7388078 | None:intergenic | 40.0% |
ACAGAATCAGATTCAGGCTT+AGG | + | chr1_4:7388086-7388105 | None:intergenic | 40.0% | |
AAGCCTGAATCTGATTCTGT+TGG | - | chr1_4:7388086-7388105 | Msa0147430:CDS | 40.0% | |
! | ACACTCATTTTATCAGAGGC+AGG | + | chr1_4:7388239-7388258 | None:intergenic | 40.0% |
TGCCTCTGATAAAATGAGTG+TGG | - | chr1_4:7388238-7388257 | Msa0147430:CDS | 40.0% | |
! | CACCACACTCATTTTATCAG+AGG | + | chr1_4:7388243-7388262 | None:intergenic | 40.0% |
CTCTGATAAAATGAGTGTGG+TGG | - | chr1_4:7388241-7388260 | Msa0147430:CDS | 40.0% | |
GATAAAATGAGTGTGGTGGT+TGG | - | chr1_4:7388245-7388264 | Msa0147430:CDS | 40.0% | |
! | TTGTGGATTGCTAGAATCTG+TGG | + | chr1_4:7388279-7388298 | None:intergenic | 40.0% |
! | ACTATCTAAAGCTTCAGTGG+AGG | - | chr1_4:7388298-7388317 | Msa0147430:CDS | 40.0% |
TCAATAATGTTGGGGCTTGT+CGG | + | chr1_4:7388401-7388420 | None:intergenic | 40.0% | |
GGAAACTTTGCTCTGTTTGA+AGG | + | chr1_4:7388546-7388565 | None:intergenic | 40.0% | |
TCTTCAGAGAAAAGCTCAGA+AGG | - | chr1_4:7388683-7388702 | Msa0147430:CDS | 40.0% | |
ACATTCATATGCCTTTCCTC+AGG | + | chr1_4:7388815-7388834 | None:intergenic | 40.0% | |
! | CTTTTCTCTGAATTACCTCC+TGG | + | chr1_4:7388914-7388933 | None:intergenic | 40.0% |
!! | AGGTATCGGTGTTGTAGATA+TGG | + | chr1_4:7388999-7389018 | None:intergenic | 40.0% |
! | AGAAGAATGTTTCTGCTGGT+GGG | - | chr1_4:7389158-7389177 | Msa0147430:CDS | 40.0% |
!! | GATTTTGATCTGAATGTGGC+TGG | - | chr1_4:7389217-7389236 | Msa0147430:CDS | 40.0% |
! | TTTTGATCTGAATGTGGCTG+GGG | - | chr1_4:7389219-7389238 | Msa0147430:CDS | 40.0% |
! | CAGCTCTTCTTTGGAAGAAA+TGG | - | chr1_4:7389403-7389422 | Msa0147430:CDS | 40.0% |
! | ATGATGATGATGCAGGTGAT+GGG | + | chr1_4:7389438-7389457 | None:intergenic | 40.0% |
! | ATTGACGATGATGATGATGC+AGG | + | chr1_4:7389445-7389464 | None:intergenic | 40.0% |
! | CAAACTGATTTACTGGACCA+AGG | - | chr1_4:7389511-7389530 | Msa0147430:CDS | 40.0% |
!! | TATTGCAGGAGCATCTGATT+TGG | + | chr1_4:7389578-7389597 | None:intergenic | 40.0% |
!!! | TGCTCCTGCAATATCGATTT+TGG | - | chr1_4:7389585-7389604 | Msa0147430:CDS | 40.0% |
!!! | GCTCCTGCAATATCGATTTT+GGG | - | chr1_4:7389586-7389605 | Msa0147430:CDS | 40.0% |
!!! | CTCCTGCAATATCGATTTTG+GGG | - | chr1_4:7389587-7389606 | Msa0147430:CDS | 40.0% |
!!! | TCCTGCAATATCGATTTTGG+GGG | - | chr1_4:7389588-7389607 | Msa0147430:CDS | 40.0% |
GTAGATCTTACAATGATGCC+AGG | - | chr1_4:7389688-7389707 | Msa0147430:CDS | 40.0% | |
AATGATTGTAGGATACCGCA+GGG | + | chr1_4:7389738-7389757 | None:intergenic | 40.0% | |
GCCATGCTCATAATATATGG+GGG | + | chr1_4:7389928-7389947 | None:intergenic | 40.0% | |
CCAGCCATGCTCATAATATA+TGG | + | chr1_4:7389931-7389950 | None:intergenic | 40.0% | |
CCATATATTATGAGCATGGC+TGG | - | chr1_4:7389928-7389947 | Msa0147430:CDS | 40.0% | |
GGTACACAGCTTGGTTTAAA+CGG | - | chr1_4:7389949-7389968 | Msa0147430:CDS | 40.0% | |
GTTAAGATCAAAGTTGGGAC+GGG | + | chr1_4:7389986-7390005 | None:intergenic | 40.0% | |
CCCGAGTTAAGATCAAAGTT+GGG | + | chr1_4:7389991-7390010 | None:intergenic | 40.0% | |
CCCAACTTTGATCTTAACTC+GGG | - | chr1_4:7389988-7390007 | Msa0147430:CDS | 40.0% | |
ACCCGAGTTAAGATCAAAGT+TGG | + | chr1_4:7389992-7390011 | None:intergenic | 40.0% | |
TCGGGTTTCATTATTGATGG+CGG | - | chr1_4:7390006-7390025 | Msa0147430:CDS | 40.0% | |
!! | ATAGAGATGCATTGACTGCA+AGG | - | chr1_4:7390031-7390050 | Msa0147430:CDS | 40.0% |
AGAACAGAGCTATGGAAGAT+AGG | - | chr1_4:7390073-7390092 | Msa0147430:CDS | 40.0% | |
CTGAACTTGAGGATTGTTGA+AGG | + | chr1_4:7390101-7390120 | None:intergenic | 40.0% | |
CTTCAACAATCCTCAAGTTC+AGG | - | chr1_4:7390099-7390118 | Msa0147430:CDS | 40.0% | |
TCAACAATCCTCAAGTTCAG+GGG | - | chr1_4:7390101-7390120 | Msa0147430:CDS | 40.0% | |
GGCAAAAGAAAAGAACCAGA+TGG | - | chr1_4:7390129-7390148 | Msa0147430:CDS | 40.0% | |
AGAAAAGAACCAGATGGTAG+CGG | - | chr1_4:7390135-7390154 | Msa0147430:CDS | 40.0% | |
GGTTGGGAAACATATCCATT+TGG | - | chr1_4:7390156-7390175 | Msa0147430:CDS | 40.0% | |
TGCTGATGTTTGTAGCCAAA+TGG | + | chr1_4:7390174-7390193 | None:intergenic | 40.0% | |
! | GTTGGTCTCTGTGATGAAGA+AGG | - | chr1_4:7387221-7387240 | Msa0147430:CDS | 45.0% |
CTGGCGATGCAATAAGACAA+TGG | - | chr1_4:7387268-7387287 | Msa0147430:CDS | 45.0% | |
GACCGTGGTTCATTGATAGA+TGG | - | chr1_4:7387361-7387380 | Msa0147430:CDS | 45.0% | |
GATGCTCAAAAATTGGGTGG+TGG | - | chr1_4:7387390-7387409 | Msa0147430:CDS | 45.0% | |
GCCACTGTAAGTAACCTTCT+TGG | - | chr1_4:7387513-7387532 | Msa0147430:CDS | 45.0% | |
GTTCATGTGTTGCGACTTGA+TGG | - | chr1_4:7387714-7387733 | Msa0147430:CDS | 45.0% | |
TCATGTGTTGCGACTTGATG+GGG | - | chr1_4:7387716-7387735 | Msa0147430:CDS | 45.0% | |
CTTATCAATGAAGGAGGAGC+AGG | - | chr1_4:7388013-7388032 | Msa0147430:CDS | 45.0% | |
AAAGGCCCTCCAGAGAAATT+AGG | - | chr1_4:7388047-7388066 | Msa0147430:CDS | 45.0% | |
GTGCTCCTAATTTCTCTGGA+GGG | + | chr1_4:7388055-7388074 | None:intergenic | 45.0% | |
GCACCAACAGAATCAGATTC+AGG | + | chr1_4:7388092-7388111 | None:intergenic | 45.0% | |
ATTGCTAGAATCTGTGGCTC+TGG | + | chr1_4:7388273-7388292 | None:intergenic | 45.0% | |
AAAGCTTCAGTGGAGGAAGA+AGG | - | chr1_4:7388305-7388324 | Msa0147430:CDS | 45.0% | |
TGTTACTCGACAAGTTGCTG+AGG | - | chr1_4:7388469-7388488 | Msa0147430:CDS | 45.0% | |
TCAGAGAAAAGCTCAGAAGG+TGG | - | chr1_4:7388686-7388705 | Msa0147430:CDS | 45.0% | |
ACTGCGAATACTCCAAGTCA+GGG | + | chr1_4:7388871-7388890 | None:intergenic | 45.0% | |
AACTGCGAATACTCCAAGTC+AGG | + | chr1_4:7388872-7388891 | None:intergenic | 45.0% | |
GAAGCAGAGACAACAGGTAT+CGG | + | chr1_4:7389013-7389032 | None:intergenic | 45.0% | |
!!! | GGTTTTGAAGCAGAGACAAC+AGG | + | chr1_4:7389019-7389038 | None:intergenic | 45.0% |
TCAAAACCTGCAGAGACTTC+AGG | - | chr1_4:7389031-7389050 | Msa0147430:CDS | 45.0% | |
CGTTCCTTCAAACTGTAGAG+GGG | + | chr1_4:7389068-7389087 | None:intergenic | 45.0% | |
GCGTTCCTTCAAACTGTAGA+GGG | + | chr1_4:7389069-7389088 | None:intergenic | 45.0% | |
AGCGTTCCTTCAAACTGTAG+AGG | + | chr1_4:7389070-7389089 | None:intergenic | 45.0% | |
CTACAGTTTGAAGGAACGCT+TGG | - | chr1_4:7389070-7389089 | Msa0147430:CDS | 45.0% | |
AGTTTGAAGGAACGCTTGGA+TGG | - | chr1_4:7389074-7389093 | Msa0147430:CDS | 45.0% | |
AAGGAACGCTTGGATGGAAA+GGG | - | chr1_4:7389080-7389099 | Msa0147430:CDS | 45.0% | |
! | GCATTTTTACGAGGTGATGC+AGG | + | chr1_4:7389130-7389149 | None:intergenic | 45.0% |
! | CAGAAGAATGTTTCTGCTGG+TGG | - | chr1_4:7389157-7389176 | Msa0147430:CDS | 45.0% |
TTTGATCTGAATGTGGCTGG+GGG | - | chr1_4:7389220-7389239 | Msa0147430:CDS | 45.0% | |
AATCTTCAGGCTTGCCTTCT+GGG | - | chr1_4:7389272-7389291 | Msa0147430:CDS | 45.0% | |
ATACCCAACCTTCAGATCAG+AGG | - | chr1_4:7389371-7389390 | Msa0147430:CDS | 45.0% | |
CATCCTCTGATCTGAAGGTT+GGG | + | chr1_4:7389377-7389396 | None:intergenic | 45.0% | |
! | GATGATGATGATGCAGGTGA+TGG | + | chr1_4:7389439-7389458 | None:intergenic | 45.0% |
! | AAGAAGATTTGGTAGGCCCT+TGG | + | chr1_4:7389531-7389550 | None:intergenic | 45.0% |
!!! | AATATCGATTTTGGGGGCCA+AGG | - | chr1_4:7389594-7389613 | Msa0147430:CDS | 45.0% |
!!! | TTTTCTACCGACTTCCACCT+TGG | + | chr1_4:7389614-7389633 | None:intergenic | 45.0% |
! | TTGGTCTTTGCCAAATGGCA+AGG | - | chr1_4:7389651-7389670 | Msa0147430:CDS | 45.0% |
GAATGATTGTAGGATACCGC+AGG | + | chr1_4:7389739-7389758 | None:intergenic | 45.0% | |
AGGTGGTACAGTTCCTTACA+TGG | - | chr1_4:7389828-7389847 | Msa0147430:CDS | 45.0% | |
TGGTACAGTTCCTTACATGG+TGG | - | chr1_4:7389831-7389850 | Msa0147430:CDS | 45.0% | |
GCCCCCATATATTATGAGCA+TGG | - | chr1_4:7389924-7389943 | Msa0147430:CDS | 45.0% | |
CAGCTTGGTTTAAACGGTGT+TGG | - | chr1_4:7389955-7389974 | Msa0147430:CDS | 45.0% | |
! | CGGGTTTCATTATTGATGGC+GGG | - | chr1_4:7390007-7390026 | Msa0147430:CDS | 45.0% |
TGGAGCTGTGATGACCAAGA+AGG | + | chr1_4:7387530-7387549 | None:intergenic | 50.0% | |
TCTTGGTCATCACAGCTCCA+AGG | - | chr1_4:7387530-7387549 | Msa0147430:CDS | 50.0% | |
AGAATCTCAAGGAGGAAGGC+CGG | - | chr1_4:7387658-7387677 | Msa0147430:CDS | 50.0% | |
CATGTGTTGCGACTTGATGG+GGG | - | chr1_4:7387717-7387736 | Msa0147430:CDS | 50.0% | |
GGTGCTCCTAATTTCTCTGG+AGG | + | chr1_4:7388056-7388075 | None:intergenic | 50.0% | |
GATTCAGGCACTATTGGTGC+AGG | + | chr1_4:7388140-7388159 | None:intergenic | 50.0% | |
CGTCGCCGTGATTAGAAACT+TGG | + | chr1_4:7388337-7388356 | None:intergenic | 50.0% | |
GGTCACAATGTTAGCGCTTC+TGG | + | chr1_4:7388567-7388586 | None:intergenic | 50.0% | |
AGTCGCTAGACAAGTTGCTG+AGG | - | chr1_4:7388634-7388653 | Msa0147430:CDS | 50.0% | |
AAAGCTCAGAAGGTGGAACG+AGG | - | chr1_4:7388693-7388712 | Msa0147430:CDS | 50.0% | |
CTTTGTCTGGATGACACCTC+GGG | + | chr1_4:7388773-7388792 | None:intergenic | 50.0% | |
GCTTTGTCTGGATGACACCT+CGG | + | chr1_4:7388774-7388793 | None:intergenic | 50.0% | |
! | TTCAGCGGAGTTGCTTTGTC+TGG | + | chr1_4:7388786-7388805 | None:intergenic | 50.0% |
TTCCTCAGGACATGCTTCAG+CGG | + | chr1_4:7388801-7388820 | None:intergenic | 50.0% | |
CTGAAGCATGTCCTGAGGAA+AGG | - | chr1_4:7388801-7388820 | Msa0147430:CDS | 50.0% | |
TCCAAGTCAGGGATGCATTC+TGG | + | chr1_4:7388860-7388879 | None:intergenic | 50.0% | |
ACTGAAGCAGCTCAAGATCC+AGG | - | chr1_4:7388893-7388912 | Msa0147430:CDS | 50.0% | |
TCAAACTGTAGAGGGGCTGT+TGG | + | chr1_4:7389061-7389080 | None:intergenic | 50.0% | |
ACAGCCCCTCTACAGTTTGA+AGG | - | chr1_4:7389061-7389080 | Msa0147430:CDS | 50.0% | |
GAAGGAACGCTTGGATGGAA+AGG | - | chr1_4:7389079-7389098 | Msa0147430:CDS | 50.0% | |
GAATCTTCAGGCTTGCCTTC+TGG | - | chr1_4:7389271-7389290 | Msa0147430:CDS | 50.0% | |
TCCACTGATGATTGCCCAGA+AGG | + | chr1_4:7389289-7389308 | None:intergenic | 50.0% | |
CCATCCTCTGATCTGAAGGT+TGG | + | chr1_4:7389378-7389397 | None:intergenic | 50.0% | |
CCAACCTTCAGATCAGAGGA+TGG | - | chr1_4:7389375-7389394 | Msa0147430:CDS | 50.0% | |
ACCTTCAGATCAGAGGATGG+AGG | - | chr1_4:7389378-7389397 | Msa0147430:CDS | 50.0% | |
CCTTCAGATCAGAGGATGGA+GGG | - | chr1_4:7389379-7389398 | Msa0147430:CDS | 50.0% | |
CTTCAGATCAGAGGATGGAG+GGG | - | chr1_4:7389380-7389399 | Msa0147430:CDS | 50.0% | |
GCCCCCAAAATCGATATTGC+AGG | + | chr1_4:7389592-7389611 | None:intergenic | 50.0% | |
CTTACAATGATGCCAGGAGC+TGG | - | chr1_4:7389694-7389713 | Msa0147430:CDS | 50.0% | |
GCTGGCGAAAAAGACAAAGG+GGG | + | chr1_4:7389796-7389815 | None:intergenic | 50.0% | |
GGCTGGCGAAAAAGACAAAG+GGG | + | chr1_4:7389797-7389816 | None:intergenic | 50.0% | |
CGGCTGGCGAAAAAGACAAA+GGG | + | chr1_4:7389798-7389817 | None:intergenic | 50.0% | |
TGTACCACCTGATCCATACG+CGG | + | chr1_4:7389818-7389837 | None:intergenic | 50.0% | |
CCTCTTGAGTCCACCATGTA+AGG | + | chr1_4:7389844-7389863 | None:intergenic | 50.0% | |
!! | CCTTACATGGTGGACTCAAG+AGG | - | chr1_4:7389841-7389860 | Msa0147430:CDS | 50.0% |
CTCCGGTAGTACCTCAAGTT+GGG | - | chr1_4:7389866-7389885 | Msa0147430:CDS | 50.0% | |
! | TCCGGTAGTACCTCAAGTTG+GGG | - | chr1_4:7389867-7389886 | Msa0147430:CDS | 50.0% |
AGATCAAAGTTGGGACGGGA+AGG | + | chr1_4:7389982-7390001 | None:intergenic | 50.0% | |
!!! | GCAAGGCCGTTTTTCTTTCC+TGG | - | chr1_4:7390048-7390067 | Msa0147430:CDS | 50.0% |
TCCTGGTCAGAACAGAGCTA+TGG | - | chr1_4:7390065-7390084 | Msa0147430:CDS | 50.0% | |
! | TCCATAGCTCTGTTCTGACC+AGG | + | chr1_4:7390069-7390088 | None:intergenic | 50.0% |
CAATCCTCAAGTTCAGGGGT+TGG | - | chr1_4:7390105-7390124 | Msa0147430:CDS | 50.0% | |
!! | AAGAACCAGATGGTAGCGGT+TGG | - | chr1_4:7390139-7390158 | Msa0147430:CDS | 50.0% |
!! | AGAACCAGATGGTAGCGGTT+GGG | - | chr1_4:7390140-7390159 | Msa0147430:CDS | 50.0% |
AACATCAGCAACAACCTCCG+TGG | - | chr1_4:7390184-7390203 | Msa0147430:CDS | 50.0% | |
CAACTCCTGCACTCGAGAAG+GGG | + | chr1_4:7387205-7387224 | None:intergenic | 55.0% | |
CCAACTCCTGCACTCGAGAA+GGG | + | chr1_4:7387206-7387225 | None:intergenic | 55.0% | |
ACCAACTCCTGCACTCGAGA+AGG | + | chr1_4:7387207-7387226 | None:intergenic | 55.0% | |
GGCCGGTTGTCTTCAGTGAA+CGG | - | chr1_4:7387675-7387694 | Msa0147430:CDS | 55.0% | |
GCCGGTTGTCTTCAGTGAAC+GGG | - | chr1_4:7387676-7387695 | Msa0147430:CDS | 55.0% | |
CCCCGTTCACTGAAGACAAC+CGG | + | chr1_4:7387680-7387699 | None:intergenic | 55.0% | |
CCGGTTGTCTTCAGTGAACG+GGG | - | chr1_4:7387677-7387696 | Msa0147430:CDS | 55.0% | |
CACGGCGACGATACCTCAAA+TGG | - | chr1_4:7388347-7388366 | Msa0147430:CDS | 55.0% | |
TCTGGATGACACCTCGGGTA+GGG | + | chr1_4:7388768-7388787 | None:intergenic | 55.0% | |
GCCAGAATGCATCCCTGACT+TGG | - | chr1_4:7388856-7388875 | Msa0147430:CDS | 55.0% | |
GAAGCAGCTCAAGATCCAGG+AGG | - | chr1_4:7388896-7388915 | Msa0147430:CDS | 55.0% | |
GGCAATCCTGAAGTCTCTGC+AGG | + | chr1_4:7389040-7389059 | None:intergenic | 55.0% | |
! | TGATGCAGGACGAAAGGCAC+TGG | + | chr1_4:7389116-7389135 | None:intergenic | 55.0% |
ACGAGGTGATGCAGGACGAA+AGG | + | chr1_4:7389122-7389141 | None:intergenic | 55.0% | |
GCCTTCTGGGCAATCATCAG+TGG | - | chr1_4:7389285-7389304 | Msa0147430:CDS | 55.0% | |
CCCTCCATCCTCTGATCTGA+AGG | + | chr1_4:7389382-7389401 | None:intergenic | 55.0% | |
ATGGAGGGGCAGCTCTTCTT+TGG | - | chr1_4:7389394-7389413 | Msa0147430:CDS | 55.0% | |
!! | ATCGATTTTGGGGGCCAAGG+TGG | - | chr1_4:7389597-7389616 | Msa0147430:CDS | 55.0% |
GGCTCAACAGCCTTGCCATT+TGG | + | chr1_4:7389664-7389683 | None:intergenic | 55.0% | |
ACAATGATGCCAGGAGCTGG+TGG | - | chr1_4:7389697-7389716 | Msa0147430:CDS | 55.0% | |
GCGGCTGGCGAAAAAGACAA+AGG | + | chr1_4:7389799-7389818 | None:intergenic | 55.0% | |
!! | TCTTTTTCGCCAGCCGCGTA+TGG | - | chr1_4:7389802-7389821 | Msa0147430:CDS | 55.0% |
GCTCCGGTAGTACCTCAAGT+TGG | - | chr1_4:7389865-7389884 | Msa0147430:CDS | 55.0% | |
! | CCCCCAACTTGAGGTACTAC+CGG | + | chr1_4:7389871-7389890 | None:intergenic | 55.0% |
!! | CCGGTAGTACCTCAAGTTGG+GGG | - | chr1_4:7389868-7389887 | Msa0147430:CDS | 55.0% |
GAGGAAGATCCCCCAACTTG+AGG | + | chr1_4:7389880-7389899 | None:intergenic | 55.0% | |
GGGGCTGAGCGTAAGATGAT+AGG | + | chr1_4:7389909-7389928 | None:intergenic | 55.0% | |
AGCATGGCTGGTACACAGCT+TGG | - | chr1_4:7389940-7389959 | Msa0147430:CDS | 55.0% | |
TCCTCAAGTTCAGGGGTTGG+TGG | - | chr1_4:7390108-7390127 | Msa0147430:CDS | 55.0% | |
GTTTCCCAACCGCTACCATC+TGG | + | chr1_4:7390147-7390166 | None:intergenic | 55.0% | |
CACAACCCCTTCTCGAGTGC+AGG | - | chr1_4:7387197-7387216 | Msa0147430:CDS | 60.0% | |
CCCTTCTCGAGTGCAGGAGT+TGG | - | chr1_4:7387203-7387222 | Msa0147430:CDS | 60.0% | |
GGCACTATTGGTGCAGGCAC+AGG | + | chr1_4:7388134-7388153 | None:intergenic | 60.0% | |
GAAGGTGGAACGAGGCAAGC+TGG | - | chr1_4:7388701-7388720 | Msa0147430:CDS | 60.0% | |
CCTCGGGTAGGGAACATGCA+AGG | + | chr1_4:7388757-7388776 | None:intergenic | 60.0% | |
CCTTGCATGTTCCCTACCCG+AGG | - | chr1_4:7388754-7388773 | Msa0147430:CDS | 60.0% | |
GTCTGGATGACACCTCGGGT+AGG | + | chr1_4:7388769-7388788 | None:intergenic | 60.0% | |
CTCCGCTGAAGCATGTCCTG+AGG | - | chr1_4:7388796-7388815 | Msa0147430:CDS | 60.0% | |
!! | ACGAAAGGCACTGGTGGCAG+CGG | + | chr1_4:7389107-7389126 | None:intergenic | 60.0% |
!! | TGCAGGACGAAAGGCACTGG+TGG | + | chr1_4:7389113-7389132 | None:intergenic | 60.0% |
GGCTGGGGGTGAAGATGAAC+TGG | - | chr1_4:7389234-7389253 | Msa0147430:CDS | 60.0% | |
TTGGGGGCCAAGGTGGAAGT+CGG | - | chr1_4:7389604-7389623 | Msa0147430:CDS | 60.0% | |
! | CAGGAGCTGGTGGCGTTTCA+GGG | - | chr1_4:7389707-7389726 | Msa0147430:CDS | 60.0% |
! | AGCTGGTGGCGTTTCAGGGA+TGG | - | chr1_4:7389711-7389730 | Msa0147430:CDS | 60.0% |
! | GCTGGTGGCGTTTCAGGGAT+GGG | - | chr1_4:7389712-7389731 | Msa0147430:CDS | 60.0% |
! | GGTGGACTCAAGAGGAGCTC+CGG | - | chr1_4:7389849-7389868 | Msa0147430:CDS | 60.0% |
GCCACCAACCCCTGAACTTG+AGG | + | chr1_4:7390112-7390131 | None:intergenic | 60.0% | |
AACGAGGCAAGCTGGCAGCG+CGG | - | chr1_4:7388709-7388728 | Msa0147430:CDS | 65.0% | |
GCTGGCAGCGCGGAATCTGT+TGG | - | chr1_4:7388719-7388738 | Msa0147430:CDS | 65.0% | |
CCTGAAACGCCACCAGCTCC+TGG | + | chr1_4:7389709-7389728 | None:intergenic | 65.0% | |
! | CCAGGAGCTGGTGGCGTTTC+AGG | - | chr1_4:7389706-7389725 | Msa0147430:CDS | 65.0% |
CGTTTCAGGGATGGGCCCTG+CGG | - | chr1_4:7389720-7389739 | Msa0147430:CDS | 65.0% | |
TCGCCAGCCGCGTATGGATC+AGG | - | chr1_4:7389808-7389827 | Msa0147430:CDS | 65.0% | |
CCACCTGATCCATACGCGGC+TGG | + | chr1_4:7389814-7389833 | None:intergenic | 65.0% | |
CCAGCCGCGTATGGATCAGG+TGG | - | chr1_4:7389811-7389830 | Msa0147430:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 7387150 | 7390212 | 7387150 | ID=Msa0147430;Name=Msa0147430 |
chr1_4 | mRNA | 7387150 | 7390212 | 7387150 | ID=Msa0147430-mRNA-1;Parent=Msa0147430;Name=Msa0147430-mRNA-1;_AED=0.11;_eAED=0.12;_QI=0|-1|0|1|-1|1|1|0|1020 |
chr1_4 | exon | 7387150 | 7390212 | 7387150 | ID=Msa0147430-mRNA-1:exon:3238;Parent=Msa0147430-mRNA-1 |
chr1_4 | CDS | 7387150 | 7390212 | 7387150 | ID=Msa0147430-mRNA-1:cds;Parent=Msa0147430-mRNA-1 |
Gene Sequence |
Protein sequence |