Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149130 | XP_013465784.1 | 98.011 | 905 | 11 | 2 | 1 | 901 | 1 | 902 | 0.0 | 1812 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149130 | sp|Q9FUY2|LEUNG_ARATH | 72.310 | 762 | 174 | 10 | 161 | 901 | 186 | 931 | 0.0 | 1043 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149130 | A0A072VNV9 | 98.011 | 905 | 11 | 2 | 1 | 901 | 1 | 902 | 0.0 | 1812 |
Gene ID | Type | Classification |
---|---|---|
Msa0149130 | TR | LUG |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149130 | MtrunA17_Chr1g0148791 | 98.011 | 905 | 11 | 2 | 1 | 901 | 1 | 902 | 0.0 | 1812 |
Msa0149130 | MtrunA17_Chr3g0138311 | 84.193 | 911 | 120 | 8 | 1 | 901 | 1 | 897 | 0.0 | 1427 |
Msa0149130 | MtrunA17_Chr7g0237271 | 42.981 | 926 | 353 | 24 | 2 | 901 | 8 | 784 | 0.0 | 594 |
Msa0149130 | MtrunA17_Chr1g0171711 | 58.469 | 431 | 155 | 7 | 481 | 901 | 370 | 786 | 8.52e-165 | 500 |
Msa0149130 | MtrunA17_Chr1g0171711 | 40.241 | 415 | 152 | 16 | 1 | 393 | 1 | 341 | 1.51e-54 | 203 |
Msa0149130 | MtrunA17_Chr7g0237241 | 53.271 | 428 | 171 | 8 | 484 | 901 | 367 | 775 | 6.41e-141 | 437 |
Msa0149130 | MtrunA17_Chr7g0237241 | 41.141 | 333 | 116 | 8 | 2 | 323 | 8 | 271 | 9.59e-52 | 194 |
Msa0149130 | MtrunA17_Chr4g0062881 | 49.649 | 427 | 176 | 9 | 476 | 901 | 69 | 457 | 4.10e-126 | 388 |
Msa0149130 | MtrunA17_Chr2g0282401 | 52.395 | 334 | 139 | 5 | 582 | 901 | 461 | 788 | 1.11e-105 | 345 |
Msa0149130 | MtrunA17_Chr4g0047051 | 42.336 | 274 | 154 | 3 | 629 | 901 | 38 | 308 | 3.38e-63 | 216 |
Msa0149130 | MtrunA17_Chr4g0047071 | 41.696 | 283 | 150 | 7 | 629 | 901 | 5 | 282 | 4.62e-59 | 203 |
Msa0149130 | MtrunA17_Chr4g0047091 | 38.811 | 286 | 167 | 5 | 619 | 901 | 86 | 366 | 5.18e-53 | 189 |
Msa0149130 | MtrunA17_Chr4g0047061 | 41.473 | 258 | 141 | 5 | 647 | 901 | 80 | 330 | 3.42e-52 | 186 |
Msa0149130 | MtrunA17_Chr4g0047101 | 38.843 | 242 | 127 | 5 | 618 | 854 | 23 | 248 | 1.69e-39 | 147 |
Msa0149130 | MtrunA17_Chr4g0047111 | 40.000 | 150 | 65 | 3 | 705 | 854 | 7 | 131 | 1.06e-27 | 109 |
Msa0149130 | MtrunA17_Chr1g0163021 | 73.846 | 65 | 15 | 1 | 789 | 851 | 19 | 83 | 2.53e-26 | 104 |
Msa0149130 | MtrunA17_Chr1g0172501 | 28.094 | 299 | 198 | 10 | 609 | 900 | 264 | 552 | 5.74e-25 | 110 |
Msa0149130 | MtrunA17_Chr3g0093681 | 27.759 | 299 | 199 | 10 | 609 | 900 | 264 | 552 | 3.77e-24 | 108 |
Msa0149130 | MtrunA17_Chr4g0062891 | 31.818 | 198 | 88 | 3 | 12 | 209 | 22 | 172 | 2.40e-22 | 96.3 |
Msa0149130 | MtrunA17_Chr5g0405851 | 28.115 | 313 | 191 | 13 | 611 | 900 | 148 | 449 | 6.01e-22 | 100 |
Msa0149130 | MtrunA17_Chr3g0136971 | 28.947 | 228 | 154 | 6 | 624 | 846 | 422 | 646 | 9.49e-21 | 97.8 |
Msa0149130 | MtrunA17_Chr6g0448921 | 28.879 | 232 | 153 | 8 | 634 | 860 | 30 | 254 | 9.27e-18 | 88.6 |
Msa0149130 | MtrunA17_Chr6g0448921 | 24.762 | 210 | 150 | 4 | 696 | 900 | 6 | 212 | 1.16e-11 | 68.9 |
Msa0149130 | MtrunA17_Chr1g0185501 | 26.316 | 285 | 162 | 8 | 621 | 900 | 27 | 268 | 2.21e-17 | 84.3 |
Msa0149130 | MtrunA17_Chr4g0067151 | 27.273 | 242 | 159 | 8 | 629 | 859 | 86 | 321 | 6.14e-16 | 80.1 |
Msa0149130 | MtrunA17_Chr4g0067151 | 26.829 | 287 | 151 | 10 | 629 | 900 | 35 | 277 | 1.24e-14 | 76.3 |
Msa0149130 | MtrunA17_Chr1g0197551 | 26.582 | 237 | 158 | 6 | 628 | 863 | 58 | 279 | 3.14e-15 | 80.5 |
Msa0149130 | MtrunA17_Chr1g0168391 | 27.807 | 187 | 129 | 4 | 635 | 816 | 238 | 423 | 3.60e-14 | 76.3 |
Msa0149130 | MtrunA17_Chr2g0331981 | 24.365 | 197 | 137 | 4 | 627 | 814 | 63 | 256 | 4.87e-14 | 76.6 |
Msa0149130 | MtrunA17_Chr5g0401661 | 23.843 | 281 | 150 | 9 | 617 | 838 | 386 | 661 | 4.91e-14 | 76.3 |
Msa0149130 | MtrunA17_Chr5g0401661 | 27.168 | 173 | 113 | 4 | 614 | 775 | 513 | 683 | 1.42e-12 | 71.6 |
Msa0149130 | MtrunA17_Chr5g0401661 | 21.231 | 325 | 216 | 11 | 609 | 900 | 323 | 640 | 3.82e-12 | 70.1 |
Msa0149130 | MtrunA17_Chr4g0004241 | 24.873 | 197 | 136 | 4 | 627 | 814 | 63 | 256 | 4.94e-14 | 76.6 |
Msa0149130 | MtrunA17_Chr4g0035611 | 25.316 | 237 | 161 | 6 | 628 | 863 | 58 | 279 | 1.84e-13 | 75.1 |
Msa0149130 | MtrunA17_Chr4g0053651 | 30.061 | 163 | 101 | 4 | 623 | 774 | 415 | 575 | 2.46e-13 | 73.9 |
Msa0149130 | MtrunA17_Chr4g0053651 | 25.448 | 279 | 146 | 10 | 617 | 838 | 281 | 554 | 8.99e-13 | 72.0 |
Msa0149130 | MtrunA17_Chr4g0053651 | 21.875 | 320 | 212 | 11 | 612 | 900 | 221 | 533 | 1.84e-12 | 71.2 |
Msa0149130 | MtrunA17_Chr2g0331961 | 21.801 | 211 | 159 | 3 | 610 | 814 | 48 | 258 | 2.99e-13 | 72.0 |
Msa0149130 | MtrunA17_Chr2g0281451 | 25.909 | 220 | 152 | 7 | 634 | 848 | 29 | 242 | 5.85e-13 | 73.2 |
Msa0149130 | MtrunA17_Chr2g0281451 | 24.762 | 210 | 150 | 4 | 696 | 900 | 5 | 211 | 3.00e-12 | 70.9 |
Msa0149130 | MtrunA17_Chr7g0253861 | 23.132 | 281 | 205 | 8 | 629 | 899 | 63 | 342 | 1.76e-12 | 69.7 |
Msa0149130 | MtrunA17_Chr8g0352821 | 21.192 | 302 | 217 | 11 | 609 | 900 | 174 | 464 | 1.84e-12 | 71.2 |
Msa0149130 | MtrunA17_Chr8g0352821 | 22.422 | 223 | 166 | 4 | 600 | 817 | 204 | 424 | 1.35e-11 | 68.6 |
Msa0149130 | MtrunA17_Chr4g0034491 | 25.316 | 237 | 148 | 9 | 678 | 901 | 34 | 254 | 3.56e-12 | 70.5 |
Msa0149130 | MtrunA17_Chr5g0401671 | 29.268 | 164 | 103 | 4 | 623 | 775 | 432 | 593 | 3.87e-12 | 70.1 |
Msa0149130 | MtrunA17_Chr5g0401671 | 23.767 | 223 | 151 | 7 | 629 | 838 | 355 | 571 | 7.15e-12 | 69.3 |
Msa0149130 | MtrunA17_Chr5g0401671 | 21.053 | 323 | 217 | 11 | 609 | 900 | 235 | 550 | 1.96e-11 | 67.8 |
Msa0149130 | MtrunA17_Chr8g0392701 | 25.403 | 248 | 162 | 11 | 635 | 868 | 30 | 268 | 4.11e-12 | 68.6 |
Msa0149130 | MtrunA17_Chr1g0176241 | 25.763 | 295 | 158 | 11 | 657 | 900 | 113 | 397 | 8.53e-12 | 68.6 |
Msa0149130 | MtrunA17_Chr2g0308391 | 23.636 | 330 | 210 | 11 | 606 | 901 | 111 | 432 | 1.76e-11 | 67.4 |
Msa0149130 | MtrunA17_Chr4g0059031 | 24.138 | 203 | 138 | 5 | 635 | 823 | 462 | 662 | 9.28e-11 | 65.9 |
Msa0149130 | MtrunA17_Chr3g0099061 | 23.200 | 250 | 175 | 7 | 624 | 860 | 267 | 512 | 9.74e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0149130 | AT4G32551.1 | 72.310 | 762 | 174 | 10 | 161 | 901 | 186 | 931 | 0.0 | 1043 |
Msa0149130 | AT4G32551.2 | 68.875 | 800 | 174 | 11 | 161 | 901 | 186 | 969 | 0.0 | 1024 |
Msa0149130 | AT2G32700.6 | 41.543 | 337 | 121 | 8 | 1 | 323 | 1 | 275 | 6.77e-53 | 198 |
Msa0149130 | AT2G32700.2 | 41.716 | 338 | 119 | 9 | 1 | 323 | 1 | 275 | 6.97e-53 | 198 |
Msa0149130 | AT2G32700.5 | 41.716 | 338 | 119 | 9 | 1 | 323 | 1 | 275 | 6.97e-53 | 198 |
Msa0149130 | AT2G32700.1 | 41.716 | 338 | 119 | 9 | 1 | 323 | 1 | 275 | 6.97e-53 | 198 |
Msa0149130 | AT2G32700.4 | 41.716 | 338 | 119 | 9 | 1 | 323 | 1 | 275 | 6.97e-53 | 198 |
Msa0149130 | AT2G32700.3 | 41.716 | 338 | 119 | 9 | 1 | 323 | 1 | 275 | 6.97e-53 | 198 |
Msa0149130 | AT2G32700.7 | 39.045 | 356 | 122 | 8 | 1 | 323 | 1 | 294 | 3.95e-50 | 190 |
Msa0149130 | AT2G41500.1 | 28.369 | 282 | 188 | 9 | 626 | 900 | 261 | 535 | 8.24e-24 | 107 |
Msa0149130 | AT2G41500.1 | 31.276 | 243 | 152 | 10 | 629 | 864 | 306 | 540 | 9.89e-18 | 88.2 |
Msa0149130 | AT2G41500.2 | 28.369 | 282 | 188 | 9 | 626 | 900 | 261 | 535 | 8.24e-24 | 107 |
Msa0149130 | AT2G41500.2 | 31.276 | 243 | 152 | 10 | 629 | 864 | 306 | 540 | 9.89e-18 | 88.2 |
Msa0149130 | AT5G25150.1 | 28.509 | 228 | 155 | 6 | 624 | 846 | 421 | 645 | 1.21e-19 | 94.7 |
Msa0149130 | AT5G25150.2 | 28.509 | 228 | 155 | 6 | 624 | 846 | 421 | 645 | 1.63e-19 | 94.4 |
Msa0149130 | AT4G02730.1 | 25.497 | 302 | 210 | 10 | 611 | 901 | 33 | 330 | 1.79e-19 | 91.3 |
Msa0149130 | AT2G33340.2 | 30.142 | 282 | 171 | 11 | 635 | 900 | 236 | 507 | 8.98e-19 | 91.3 |
Msa0149130 | AT2G33340.1 | 30.142 | 282 | 171 | 11 | 635 | 900 | 236 | 507 | 8.98e-19 | 91.3 |
Msa0149130 | AT5G08390.1 | 27.660 | 282 | 177 | 11 | 603 | 875 | 1 | 264 | 9.03e-19 | 92.4 |
Msa0149130 | AT5G08390.1 | 25.714 | 210 | 148 | 4 | 696 | 900 | 6 | 212 | 8.08e-13 | 73.2 |
Msa0149130 | AT2G33340.3 | 31.301 | 246 | 145 | 10 | 635 | 864 | 236 | 473 | 2.39e-18 | 89.7 |
Msa0149130 | AT5G23430.3 | 27.305 | 282 | 178 | 11 | 603 | 875 | 1 | 264 | 3.97e-18 | 90.1 |
Msa0149130 | AT5G23430.3 | 26.316 | 209 | 146 | 4 | 697 | 900 | 7 | 212 | 1.04e-12 | 72.8 |
Msa0149130 | AT5G23430.2 | 27.305 | 282 | 178 | 11 | 603 | 875 | 1 | 264 | 3.97e-18 | 90.1 |
Msa0149130 | AT5G23430.2 | 26.316 | 209 | 146 | 4 | 697 | 900 | 7 | 212 | 1.04e-12 | 72.8 |
Msa0149130 | AT5G23430.1 | 27.305 | 282 | 178 | 11 | 603 | 875 | 1 | 264 | 4.08e-18 | 90.1 |
Msa0149130 | AT5G23430.1 | 26.316 | 209 | 146 | 4 | 697 | 900 | 7 | 212 | 1.05e-12 | 72.8 |
Msa0149130 | AT3G49660.1 | 25.540 | 278 | 157 | 8 | 629 | 900 | 79 | 312 | 1.50e-17 | 85.1 |
Msa0149130 | AT1G61210.1 | 25.182 | 274 | 186 | 10 | 607 | 875 | 4 | 263 | 4.22e-16 | 84.0 |
Msa0149130 | AT1G61210.1 | 25.943 | 212 | 145 | 5 | 696 | 900 | 5 | 211 | 4.47e-13 | 73.9 |
Msa0149130 | AT1G61210.2 | 25.182 | 274 | 186 | 10 | 607 | 875 | 4 | 263 | 5.18e-16 | 83.6 |
Msa0149130 | AT1G61210.2 | 25.943 | 212 | 145 | 5 | 696 | 900 | 5 | 211 | 5.58e-13 | 73.9 |
Msa0149130 | AT1G61210.3 | 25.182 | 274 | 186 | 10 | 607 | 875 | 4 | 263 | 6.26e-16 | 83.2 |
Msa0149130 | AT1G61210.3 | 25.943 | 212 | 145 | 5 | 696 | 900 | 5 | 211 | 7.52e-13 | 73.2 |
Msa0149130 | AT1G04510.2 | 30.526 | 190 | 123 | 5 | 635 | 816 | 236 | 424 | 2.64e-15 | 80.5 |
Msa0149130 | AT1G04510.1 | 30.526 | 190 | 123 | 5 | 635 | 816 | 236 | 424 | 2.96e-15 | 80.1 |
Msa0149130 | AT2G21390.1 | 26.354 | 277 | 184 | 10 | 628 | 901 | 58 | 317 | 2.32e-14 | 78.2 |
Msa0149130 | AT1G62020.1 | 25.000 | 276 | 189 | 8 | 628 | 901 | 58 | 317 | 2.46e-14 | 78.2 |
Msa0149130 | AT3G15980.1 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.67e-14 | 77.8 |
Msa0149130 | AT3G15980.3 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.71e-14 | 77.8 |
Msa0149130 | AT3G15980.6 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.71e-14 | 77.8 |
Msa0149130 | AT3G15980.2 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.71e-14 | 77.8 |
Msa0149130 | AT3G15980.4 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.71e-14 | 77.8 |
Msa0149130 | AT3G15980.7 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.75e-14 | 77.8 |
Msa0149130 | AT3G15980.5 | 25.114 | 219 | 144 | 6 | 605 | 814 | 49 | 256 | 2.85e-14 | 77.8 |
Msa0149130 | AT1G52360.4 | 24.873 | 197 | 136 | 4 | 627 | 814 | 63 | 256 | 3.67e-14 | 77.4 |
Msa0149130 | AT1G52360.1 | 24.873 | 197 | 136 | 4 | 627 | 814 | 63 | 256 | 3.67e-14 | 77.4 |
Msa0149130 | AT1G11160.1 | 25.455 | 220 | 153 | 7 | 634 | 848 | 29 | 242 | 4.06e-14 | 77.4 |
Msa0149130 | AT1G11160.1 | 27.230 | 213 | 141 | 6 | 696 | 900 | 5 | 211 | 3.54e-13 | 74.3 |
Msa0149130 | AT1G11160.1 | 24.868 | 189 | 131 | 7 | 678 | 861 | 31 | 213 | 1.53e-12 | 72.4 |
Msa0149130 | AT1G11160.1 | 26.606 | 218 | 149 | 8 | 605 | 815 | 81 | 294 | 2.70e-11 | 68.2 |
Msa0149130 | AT1G52360.3 | 24.873 | 197 | 136 | 4 | 627 | 814 | 63 | 256 | 4.58e-14 | 77.0 |
Msa0149130 | AT1G11160.2 | 25.455 | 220 | 153 | 7 | 634 | 848 | 29 | 242 | 5.06e-14 | 77.0 |
Msa0149130 | AT1G11160.2 | 27.230 | 213 | 141 | 6 | 696 | 900 | 5 | 211 | 4.45e-13 | 73.9 |
Msa0149130 | AT1G11160.2 | 24.868 | 189 | 131 | 7 | 678 | 861 | 31 | 213 | 1.91e-12 | 72.0 |
Msa0149130 | AT1G11160.2 | 26.606 | 218 | 149 | 8 | 605 | 815 | 81 | 294 | 3.07e-11 | 68.2 |
Msa0149130 | AT1G11160.4 | 25.455 | 220 | 153 | 7 | 634 | 848 | 29 | 242 | 6.10e-14 | 76.6 |
Msa0149130 | AT1G11160.4 | 27.230 | 213 | 141 | 6 | 696 | 900 | 5 | 211 | 5.95e-13 | 73.6 |
Msa0149130 | AT1G11160.4 | 24.868 | 189 | 131 | 7 | 678 | 861 | 31 | 213 | 2.49e-12 | 71.6 |
Msa0149130 | AT1G11160.4 | 26.606 | 218 | 149 | 8 | 605 | 815 | 81 | 294 | 3.93e-11 | 67.8 |
Msa0149130 | AT5G67320.1 | 31.707 | 164 | 99 | 4 | 623 | 775 | 450 | 611 | 6.25e-14 | 76.3 |
Msa0149130 | AT5G67320.1 | 25.561 | 223 | 147 | 7 | 629 | 838 | 373 | 589 | 5.13e-12 | 70.1 |
Msa0149130 | AT1G52360.2 | 23.762 | 202 | 132 | 4 | 627 | 814 | 107 | 300 | 7.19e-14 | 76.6 |
Msa0149130 | AT5G13480.1 | 24.775 | 222 | 160 | 5 | 601 | 817 | 145 | 364 | 2.19e-13 | 74.7 |
Msa0149130 | AT5G13480.1 | 22.517 | 302 | 213 | 11 | 609 | 900 | 114 | 404 | 3.00e-13 | 74.3 |
Msa0149130 | AT5G13480.3 | 24.775 | 222 | 160 | 5 | 601 | 817 | 133 | 352 | 2.31e-13 | 74.3 |
Msa0149130 | AT5G13480.3 | 22.517 | 302 | 213 | 11 | 609 | 900 | 102 | 392 | 3.32e-13 | 73.9 |
Msa0149130 | AT5G13480.4 | 24.775 | 222 | 160 | 5 | 601 | 817 | 133 | 352 | 2.49e-13 | 74.3 |
Msa0149130 | AT5G13480.4 | 22.517 | 302 | 213 | 11 | 609 | 900 | 102 | 392 | 3.86e-13 | 73.9 |
Msa0149130 | AT5G13480.2 | 24.775 | 222 | 160 | 5 | 601 | 817 | 156 | 375 | 3.56e-13 | 73.9 |
Msa0149130 | AT1G48630.1 | 30.667 | 225 | 123 | 11 | 621 | 817 | 105 | 324 | 7.55e-13 | 71.2 |
Msa0149130 | AT3G42660.1 | 30.808 | 198 | 123 | 7 | 629 | 814 | 70 | 265 | 8.99e-13 | 73.2 |
Msa0149130 | AT1G79990.1 | 22.791 | 215 | 144 | 4 | 614 | 814 | 50 | 256 | 1.34e-12 | 72.4 |
Msa0149130 | AT1G79990.2 | 22.791 | 215 | 144 | 4 | 614 | 814 | 50 | 256 | 1.63e-12 | 72.0 |
Msa0149130 | AT1G18080.1 | 26.506 | 249 | 159 | 13 | 635 | 868 | 30 | 269 | 4.73e-12 | 68.9 |
Msa0149130 | AT1G71840.1 | 25.597 | 293 | 197 | 9 | 622 | 901 | 114 | 398 | 5.50e-12 | 69.3 |
Msa0149130 | AT3G18130.1 | 29.778 | 225 | 125 | 11 | 621 | 817 | 105 | 324 | 9.10e-12 | 67.8 |
Msa0149130 | AT3G18130.1 | 26.210 | 248 | 160 | 13 | 635 | 868 | 30 | 268 | 3.60e-11 | 66.2 |
Msa0149130 | AT1G11160.3 | 25.301 | 166 | 114 | 6 | 701 | 861 | 11 | 171 | 2.04e-11 | 68.6 |
Msa0149130 | AT1G11160.3 | 26.606 | 218 | 149 | 8 | 605 | 815 | 39 | 252 | 3.37e-11 | 67.8 |
Msa0149130 | AT2G43770.1 | 23.967 | 242 | 161 | 10 | 617 | 843 | 92 | 325 | 8.36e-11 | 65.1 |
Find 249 sgRNAs with CRISPR-Local
Find 739 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTACTGAATACTCGAAATA+TGG | 0.215012 | 1_4:-9658875 | Msa0149130:CDS |
CTTTCTTCCAGGCTGGCTTT+TGG | 0.220270 | 1_4:+9658224 | None:intergenic |
GGCTGCTTTCTCTTTCTTCC+AGG | 0.229511 | 1_4:+9658213 | None:intergenic |
TCCCCTTCAAAGGGATTCTT+TGG | 0.239715 | 1_4:-9661079 | Msa0149130:CDS |
TCTGTCAGGGTTTGGACTCT+TGG | 0.262727 | 1_4:-9653808 | Msa0149130:CDS |
TTCAGTATTGAAGCATGATT+TGG | 0.269507 | 1_4:+9660922 | None:intergenic |
GGATCCTTCTGGAGAGTTCC+TGG | 0.277296 | 1_4:-9653848 | Msa0149130:CDS |
TCCTTCGGGACCCGCAGCTC+TGG | 0.277649 | 1_4:+9660079 | None:intergenic |
CAGATAAGGTCATCTTTATT+AGG | 0.280319 | 1_4:+9654702 | None:intergenic |
ATTTGAGATAAGCGGGAAAA+AGG | 0.287558 | 1_4:+9652985 | None:intergenic |
TATTCGCTTCGTACCTTCAC+TGG | 0.290402 | 1_4:-9654759 | Msa0149130:CDS |
TTTGCAGACTCAGTTAATTA+AGG | 0.290580 | 1_4:-9661433 | Msa0149130:intron |
TCTGTTTGTTGGGATCCTTC+TGG | 0.297006 | 1_4:-9653859 | Msa0149130:CDS |
CTGTTGCTGCTGCTGCTCCC+TGG | 0.311995 | 1_4:+9661410 | None:intergenic |
TCAGTGCTAAACATCATTAA+TGG | 0.313948 | 1_4:+9658036 | None:intergenic |
TCAGCATGTCTCAGACTAAC+TGG | 0.318900 | 1_4:-9663090 | Msa0149130:exon |
GCAGCTACTGGCCAGCCGTC+AGG | 0.331144 | 1_4:-9660892 | Msa0149130:CDS |
GCAACAGCAACAGCAACAAC+AGG | 0.334166 | 1_4:-9661211 | Msa0149130:CDS |
CGACAAAACTGTCCGGGTTT+GGG | 0.337997 | 1_4:-9655279 | Msa0149130:CDS |
GGCAATACATTCTGTTTGTT+GGG | 0.354080 | 1_4:-9653869 | Msa0149130:CDS |
GCTGTTGCTGCTGTTGCTGC+TGG | 0.364074 | 1_4:+9661289 | None:intergenic |
ACGACAAAACTGTCCGGGTT+TGG | 0.366564 | 1_4:-9655280 | Msa0149130:CDS |
AAGCAGCCTGTATCTTCTTC+TGG | 0.371031 | 1_4:-9658198 | Msa0149130:CDS |
CTCATCCGACGGAAAATTGC+TGG | 0.373189 | 1_4:-9655622 | Msa0149130:CDS |
ATTCGCCGTTCCTGAGCTAT+TGG | 0.374104 | 1_4:+9658170 | None:intergenic |
CTGTCAGTGAGGACTCTGTC+AGG | 0.374353 | 1_4:-9653822 | Msa0149130:CDS |
AGGCAATACATTCTGTTTGT+TGG | 0.377394 | 1_4:-9653870 | Msa0149130:CDS |
TATTCCGTACAGCAAAGATT+TGG | 0.380314 | 1_4:-9660961 | Msa0149130:intron |
AACCAACCTTTAGAGAATAT+CGG | 0.380809 | 1_4:+9654399 | None:intergenic |
GTGAGGACTCTGTCAGGGTT+TGG | 0.381071 | 1_4:-9653816 | Msa0149130:CDS |
ATGCCTTCTTTACCTCATAA+TGG | 0.384032 | 1_4:-9658072 | Msa0149130:CDS |
ATCACCATTCTTGTTTACTT+TGG | 0.387758 | 1_4:-9653058 | Msa0149130:three_prime_UTR |
AAGTGGTGGTCATGACAAAA+AGG | 0.389588 | 1_4:-9655598 | Msa0149130:intron |
CAGAGTCATCGTCTTGTTCT+CGG | 0.399834 | 1_4:+9653351 | None:intergenic |
GGTTTGGATCAACTTCGTTC+TGG | 0.400659 | 1_4:-9659048 | Msa0149130:CDS |
CCCTCTTCACAAGGTAATCA+TGG | 0.400979 | 1_4:+9662611 | None:intergenic |
TGATAAGGATATTGAATTGC+AGG | 0.401833 | 1_4:-9657885 | Msa0149130:CDS |
TCTGTATCCCCACGAGGAAA+TGG | 0.402442 | 1_4:+9658772 | None:intergenic |
ATATTATATTGTCCAATTTG+AGG | 0.406766 | 1_4:+9653017 | None:intergenic |
GCTTTCTCTTTCTTCCAGGC+TGG | 0.411154 | 1_4:+9658217 | None:intergenic |
CTGGCCGTTTCAACTGTAAA+CGG | 0.415285 | 1_4:-9653301 | Msa0149130:CDS |
TGAAGGTGAGGTAAGAGTTC+CGG | 0.416306 | 1_4:+9658008 | None:intergenic |
CGTTTCAACTGTAAACGGTT+TGG | 0.422095 | 1_4:-9653296 | Msa0149130:CDS |
AGCATGTCAAACTCCTTTAG+AGG | 0.423665 | 1_4:-9658438 | Msa0149130:CDS |
AGGGTTTGGACTCTTGGATC+CGG | 0.427106 | 1_4:-9653802 | Msa0149130:CDS |
TACCTCACCTTCAAACCAAT+TGG | 0.427331 | 1_4:-9657998 | Msa0149130:intron |
GGAGGTGGTGGCAGTGTCAC+CGG | 0.429211 | 1_4:-9658468 | Msa0149130:CDS |
AATTGCCATCAATGATCCTT+CGG | 0.429714 | 1_4:+9660064 | None:intergenic |
CACAATCACAAGAGCAGATA+AGG | 0.434305 | 1_4:+9654688 | None:intergenic |
GGCTGTGGACTTTGTATGAA+AGG | 0.435451 | 1_4:+9659006 | None:intergenic |
TATTCTTCACTGTTGGTCAT+TGG | 0.436333 | 1_4:-9653706 | Msa0149130:CDS |
GTTGCAAGACGAGGCATGCT+TGG | 0.439452 | 1_4:+9655311 | None:intergenic |
CCTTCGGGACCCGCAGCTCT+GGG | 0.440207 | 1_4:+9660080 | None:intergenic |
GCTATAGCATTTGCAGTGCT+AGG | 0.440653 | 1_4:+9661132 | None:intergenic |
GGATCATTGATGGCAATTCC+TGG | 0.445159 | 1_4:-9660059 | Msa0149130:intron |
CTACTGAATACTCGAAATAT+GGG | 0.447589 | 1_4:-9658874 | Msa0149130:CDS |
CTTACATCCATACGTCCAAC+TGG | 0.450306 | 1_4:+9657776 | None:intergenic |
TGTTGAAGTTGCTGCTGTTG+TGG | 0.451169 | 1_4:+9658564 | None:intergenic |
GTGATGGCGAGATAAGATAT+TGG | 0.451982 | 1_4:-9654668 | Msa0149130:CDS |
CTATAGCATTTGCAGTGCTA+GGG | 0.452062 | 1_4:+9661133 | None:intergenic |
ATTGCCATCAATGATCCTTC+GGG | 0.454467 | 1_4:+9660065 | None:intergenic |
GATTGCAGCTATTGACGCTC+CGG | 0.455090 | 1_4:-9662447 | Msa0149130:intron |
TTGAATGGTGGTGGTGCAAA+TGG | 0.456464 | 1_4:-9661168 | Msa0149130:CDS |
AGAAAAGAAAGAGGAATTTG+AGG | 0.456890 | 1_4:+9663228 | None:intergenic |
TGGAGGACCACCTGCTTGAA+GGG | 0.457373 | 1_4:+9658792 | None:intergenic |
CATCAGCAAGATAATAAAGT+AGG | 0.460968 | 1_4:-9658492 | Msa0149130:CDS |
AAAGAAAGAGAGGAAATTGA+AGG | 0.461183 | 1_4:+9663112 | None:intergenic |
ATGGAGGACCACCTGCTTGA+AGG | 0.461767 | 1_4:+9658791 | None:intergenic |
GGTTAAAACTTCCCCTTCAA+AGG | 0.463050 | 1_4:-9661089 | Msa0149130:CDS |
CTGAAGTCTTCTGCAGCTAC+TGG | 0.463767 | 1_4:-9660904 | Msa0149130:CDS |
CTTCCAAAGAATCCCTTTGA+AGG | 0.464358 | 1_4:+9661076 | None:intergenic |
CTCTTGGATCCGGGAGTGAA+GGG | 0.464635 | 1_4:-9653792 | Msa0149130:CDS |
ATACGTCCAACTGGATCTCT+AGG | 0.467235 | 1_4:+9657785 | None:intergenic |
TCTGGGACATATTCATTGCC+AGG | 0.468489 | 1_4:-9662394 | Msa0149130:CDS |
AAGGTTTCCAAAAGCCAGCC+TGG | 0.469080 | 1_4:-9658231 | Msa0149130:CDS |
ATGACAGGTTTGTCAAGCTC+TGG | 0.469781 | 1_4:-9653258 | Msa0149130:CDS |
TTTGGAAGATGCTGCAATGA+AGG | 0.471073 | 1_4:-9661061 | Msa0149130:intron |
TCGAAATATGGGCGTAGGTA+AGG | 0.473330 | 1_4:-9658863 | Msa0149130:CDS |
TTGCTTCTGCCAGTCATGAC+AGG | 0.476091 | 1_4:-9653273 | Msa0149130:CDS |
CAGCTACTGGCCAGCCGTCA+GGG | 0.476806 | 1_4:-9660891 | Msa0149130:intron |
TGTGGTGATTGCTGAGGTTG+TGG | 0.478321 | 1_4:+9661378 | None:intergenic |
GTTAAAACTTCCCCTTCAAA+GGG | 0.479667 | 1_4:-9661088 | Msa0149130:CDS |
GGATTTGAAAGCTTCTGCTC+AGG | 0.480442 | 1_4:-9662590 | Msa0149130:CDS |
GCTCGTAGTCAGCAACTACC+AGG | 0.480624 | 1_4:-9660228 | Msa0149130:CDS |
TTTGATACAACATCACCAAC+AGG | 0.480943 | 1_4:+9658826 | None:intergenic |
TCACTCACCAATTGGTTTGA+AGG | 0.481107 | 1_4:+9657991 | None:intergenic |
GTTCATGAGCTTAGCTGTAA+TGG | 0.482292 | 1_4:-9653763 | Msa0149130:CDS |
TGCTTCAATTTGAGATAAGC+GGG | 0.485783 | 1_4:+9652978 | None:intergenic |
CGAATGCTTCTCGTTCGTCC+TGG | 0.487054 | 1_4:+9662376 | None:intergenic |
AAGATTTGGAGACCAACTCT+TGG | 0.491258 | 1_4:-9660947 | Msa0149130:CDS |
GTTGGTCATTGGCTGTTACC+AGG | 0.492797 | 1_4:-9653695 | Msa0149130:intron |
GCCGTTCCTGAGCTATTGGC+AGG | 0.493632 | 1_4:+9658174 | None:intergenic |
TTTGTTCCAGGATCAAATCA+AGG | 0.493877 | 1_4:-9659833 | Msa0149130:intron |
GGTGGTGCAAATGGATTAGT+TGG | 0.495463 | 1_4:-9661159 | Msa0149130:CDS |
AACACATTCCCCTTCACTCC+CGG | 0.496713 | 1_4:+9653783 | None:intergenic |
CTCCTTTAGAGGAAATGATC+AGG | 0.498610 | 1_4:-9658427 | Msa0149130:intron |
GTGGTCCTCCATTTCCTCGT+GGG | 0.498686 | 1_4:-9658780 | Msa0149130:CDS |
ATCAGCAAGATAATAAAGTA+GGG | 0.498935 | 1_4:-9658491 | Msa0149130:CDS |
GGTGGCAGTGTCACCGGAGA+TGG | 0.499240 | 1_4:-9658462 | Msa0149130:CDS |
GCAGCTCTGGGATTCAATAC+AGG | 0.499386 | 1_4:+9660092 | None:intergenic |
CTTCATACGACAAAACTGTC+CGG | 0.501200 | 1_4:-9655286 | Msa0149130:CDS |
AACATTGGAAGTTGATGAAA+AGG | 0.502215 | 1_4:+9658985 | None:intergenic |
CGACGGTCTTATTGCTGCAC+TGG | 0.504027 | 1_4:-9653320 | Msa0149130:CDS |
CTACCATTATGAGGTAAAGA+AGG | 0.504668 | 1_4:+9658069 | None:intergenic |
GGCAACAATTTGACTCTGAA+AGG | 0.505531 | 1_4:-9659809 | Msa0149130:CDS |
GGGTTTGGACTCTTGGATCC+GGG | 0.509335 | 1_4:-9653801 | Msa0149130:CDS |
GATAGGGCTCATCTCTTGAA+TGG | 0.510034 | 1_4:-9661183 | Msa0149130:CDS |
TCTGGTCCTGCCAATAGCTC+AGG | 0.511262 | 1_4:-9658180 | Msa0149130:CDS |
CACCAATTGGTTTGAAGGTG+AGG | 0.512905 | 1_4:+9657996 | None:intergenic |
AAGTTGCTGCTGTTGTGGAT+TGG | 0.513253 | 1_4:+9658569 | None:intergenic |
TAGAGATCCAGTTGGACGTA+TGG | 0.514732 | 1_4:-9657783 | Msa0149130:CDS |
CCATGATTACCTTGTGAAGA+GGG | 0.515237 | 1_4:-9662611 | Msa0149130:CDS |
ATTCGCTTCGTACCTTCACT+GGG | 0.516583 | 1_4:-9654758 | Msa0149130:CDS |
ACTCTTGGATCCGGGAGTGA+AGG | 0.516593 | 1_4:-9653793 | Msa0149130:CDS |
AGACTCAGTTAATTAAGGCC+AGG | 0.517269 | 1_4:-9661428 | Msa0149130:CDS |
TGCTGCTGCTGCTGTTGATG+TGG | 0.517296 | 1_4:+9661360 | None:intergenic |
GGGTCCCGAAGGATCATTGA+TGG | 0.518120 | 1_4:-9660069 | Msa0149130:CDS |
TCAGGAACGGCGAATACAGC+AGG | 0.518900 | 1_4:-9658162 | Msa0149130:CDS |
GGTGATGTTGTATCAAATGT+TGG | 0.519063 | 1_4:-9658820 | Msa0149130:CDS |
TATAGCAACAAAGATGTATG+AGG | 0.521157 | 1_4:-9661115 | Msa0149130:CDS |
CTCTGGAAGTGACCTTGACC+TGG | 0.521678 | 1_4:-9653241 | Msa0149130:exon |
TATTGAATTGCAGGCAGATG+TGG | 0.524531 | 1_4:-9657876 | Msa0149130:CDS |
GTTTGACATGCTACCATCTC+CGG | 0.525166 | 1_4:+9658449 | None:intergenic |
CACTGGCAGAAGGTGATGCC+AGG | 0.525453 | 1_4:+9658920 | None:intergenic |
TTAGAAGAACTACCATTATG+AGG | 0.525961 | 1_4:+9658060 | None:intergenic |
TTAATGATGTTTAGCACTGA+TGG | 0.526495 | 1_4:-9658033 | Msa0149130:CDS |
TCAGCACCCTCAACTCCCTC+AGG | 0.530325 | 1_4:-9658126 | Msa0149130:CDS |
GGAGTTGAGGGTGCTGAACT+CGG | 0.531351 | 1_4:+9658132 | None:intergenic |
GTATTGAATCCCAGAGCTGC+GGG | 0.532097 | 1_4:-9660089 | Msa0149130:CDS |
AGCAACAACAGGGTAGGGAT+AGG | 0.532280 | 1_4:-9661200 | Msa0149130:CDS |
CAAACCGTTTACAGTTGAAA+CGG | 0.534008 | 1_4:+9653297 | None:intergenic |
TTCCAAAGAATCCCTTTGAA+GGG | 0.534349 | 1_4:+9661077 | None:intergenic |
CAGGACGAACGAGAAGCATT+CGG | 0.536737 | 1_4:-9662375 | Msa0149130:CDS |
CTTGACAAACCTGTCATGAC+TGG | 0.537092 | 1_4:+9653264 | None:intergenic |
GAGGCATGCTTGGACTGAAA+CGG | 0.537352 | 1_4:+9655321 | None:intergenic |
GACCTGATCATTTCCTCTAA+AGG | 0.538061 | 1_4:+9658425 | None:intergenic |
ATGAGATTTCAACCTCGGCT+AGG | 0.539848 | 1_4:-9654485 | Msa0149130:CDS |
GCTCATCTCTTGAATGGTGG+TGG | 0.541010 | 1_4:-9661177 | Msa0149130:CDS |
ATCTCCAAAGTAAACAAGAA+TGG | 0.541887 | 1_4:+9653054 | None:intergenic |
GTTGAGCCTGAGGGAGTTGA+GGG | 0.543304 | 1_4:+9658120 | None:intergenic |
TTTCACCAATTAGGGTGGCA+TGG | 0.543529 | 1_4:-9654513 | Msa0149130:intron |
TGAGATTTCAACCTCGGCTA+GGG | 0.544412 | 1_4:-9654484 | Msa0149130:CDS |
GGAAGTGACCTTGACCTGGC+CGG | 0.545390 | 1_4:-9653237 | Msa0149130:exon |
AAGAAAATTACCCTGACGGC+TGG | 0.546194 | 1_4:+9660881 | None:intergenic |
GCAACAACAGGGTAGGGATA+GGG | 0.546406 | 1_4:-9661199 | Msa0149130:CDS |
ATTGCAGCTATTGACGCTCC+GGG | 0.546824 | 1_4:-9662446 | Msa0149130:intron |
ATGCTTCAATTTGAGATAAG+CGG | 0.547287 | 1_4:+9652977 | None:intergenic |
TCAGGCTCAACTCATACGCC+TGG | 0.547499 | 1_4:-9658108 | Msa0149130:CDS |
GCAGGACCAGAAGAAGATAC+AGG | 0.547791 | 1_4:+9658192 | None:intergenic |
ACAACAATGGTACACCGGCC+AGG | 0.551327 | 1_4:+9653223 | None:intergenic |
TTCATACGACAAAACTGTCC+GGG | 0.551430 | 1_4:-9655285 | Msa0149130:CDS |
CTTTCAAATCCCTCTTCACA+AGG | 0.552981 | 1_4:+9662602 | None:intergenic |
GACTCAGTTAATTAAGGCCA+GGG | 0.553687 | 1_4:-9661427 | Msa0149130:CDS |
TATGTTAGCTCAGCAAAACC+TGG | 0.561807 | 1_4:-9658938 | Msa0149130:CDS |
CCCAGAGCTGCGGGTCCCGA+AGG | 0.562961 | 1_4:-9660080 | Msa0149130:CDS |
GTTGGATCGCCCCTTCAAGC+AGG | 0.563914 | 1_4:-9658802 | Msa0149130:CDS |
CACAGATGAGATTTCAACCT+CGG | 0.564308 | 1_4:-9654490 | Msa0149130:CDS |
CATGATTTGGATCCAAGAGT+TGG | 0.564748 | 1_4:+9660935 | None:intergenic |
CAGCATGTCTCAGACTAACT+GGG | 0.568318 | 1_4:-9663089 | Msa0149130:exon |
ATCTGCTCTTGTGATTGTGA+TGG | 0.568385 | 1_4:-9654684 | Msa0149130:CDS |
CAGTTGTGCTAGAGTGTCAA+AGG | 0.569797 | 1_4:-9654631 | Msa0149130:intron |
GGAAAATTGCTGGCAAGTGG+TGG | 0.570448 | 1_4:-9655612 | Msa0149130:CDS |
GGCATTGATATCACATCACC+AGG | 0.574381 | 1_4:+9658090 | None:intergenic |
GAGTCTTCTACTATCATCAC+TGG | 0.575360 | 1_4:+9658903 | None:intergenic |
CAACAGCAACAGCAACAACA+GGG | 0.577764 | 1_4:-9661210 | Msa0149130:CDS |
AGTTGAGCCTGAGGGAGTTG+AGG | 0.578185 | 1_4:+9658119 | None:intergenic |
AAGAAAGAGAGGAAATTGAA+GGG | 0.578375 | 1_4:+9663113 | None:intergenic |
GAGGGTGCTGAACTCGGAGA+TGG | 0.581484 | 1_4:+9658138 | None:intergenic |
AGCATGCCGATATTCTCTAA+AGG | 0.582189 | 1_4:-9654405 | Msa0149130:intron |
CAACAAAGATGTATGAGGAA+AGG | 0.582289 | 1_4:-9661110 | Msa0149130:CDS |
CATTGTCAACATCCCAAACC+CGG | 0.582820 | 1_4:+9655267 | None:intergenic |
TGTAGCCATTTCTCATCCGA+CGG | 0.583371 | 1_4:-9655633 | Msa0149130:CDS |
TCCAAAGAATCCCTTTGAAG+GGG | 0.584726 | 1_4:+9661078 | None:intergenic |
ACAGTGAAGAATACGTTGGA+TGG | 0.585218 | 1_4:+9653716 | None:intergenic |
GCAACAATTTGACTCTGAAA+GGG | 0.587520 | 1_4:-9659808 | Msa0149130:CDS |
TGCAACAGATGCTGTTACAG+AGG | 0.587553 | 1_4:-9661317 | Msa0149130:CDS |
TCTTGGATCCGGGAGTGAAG+GGG | 0.588423 | 1_4:-9653791 | Msa0149130:CDS |
GGATACAGATATGCTAATGA+AGG | 0.589638 | 1_4:-9658758 | Msa0149130:intron |
TGTCAGTGAGGACTCTGTCA+GGG | 0.589779 | 1_4:-9653821 | Msa0149130:CDS |
AGCTGCAGAATGCCCAGTGA+AGG | 0.591836 | 1_4:+9654746 | None:intergenic |
AATACTCGAAATATGGGCGT+AGG | 0.592234 | 1_4:-9658868 | Msa0149130:CDS |
AGTCCTCACTGACAGATGCC+AGG | 0.592927 | 1_4:+9653830 | None:intergenic |
ACACAGAGGAGAAAAGAAAG+AGG | 0.593818 | 1_4:+9663219 | None:intergenic |
AACATTGTATTGTACAACAA+TGG | 0.594770 | 1_4:+9653210 | None:intergenic |
TGTTGTTGCTGCTGATGTTG+CGG | 0.595294 | 1_4:+9661240 | None:intergenic |
AAGTAACAGTTACAAAAGAG+AGG | 0.595747 | 1_4:+9663183 | None:intergenic |
TCCAACGTATTCTTCACTGT+TGG | 0.596123 | 1_4:-9653713 | Msa0149130:CDS |
GGGTATTGAAGAAATGAAAG+AGG | 0.597480 | 1_4:+9663133 | None:intergenic |
GGATCGCCCCTTCAAGCAGG+TGG | 0.597620 | 1_4:-9658799 | Msa0149130:CDS |
GATGGCCTTTCAAATCCTGT+TGG | 0.598824 | 1_4:-9658841 | Msa0149130:CDS |
ATCTGCAGTCATTGGAGCTG+TGG | 0.600675 | 1_4:-9653381 | Msa0149130:intron |
GACGGAAAATTGCTGGCAAG+TGG | 0.600746 | 1_4:-9655615 | Msa0149130:CDS |
GCAACAGCAACAACAGGGTA+GGG | 0.604132 | 1_4:-9661205 | Msa0149130:CDS |
TACGTCCAACTGGATCTCTA+GGG | 0.604560 | 1_4:+9657786 | None:intergenic |
CGTTCTCTGCAGCTGCAGCA+AGG | 0.605390 | 1_4:+9654456 | None:intergenic |
CATCACCAACAGGATTTGAA+AGG | 0.605402 | 1_4:+9658836 | None:intergenic |
GGAGGACCACCTGCTTGAAG+GGG | 0.605415 | 1_4:+9658793 | None:intergenic |
ATGTTTAGCACTGATGGCAC+CGG | 0.605485 | 1_4:-9658027 | Msa0149130:CDS |
TGTTGATGTGGTGATTGCTG+AGG | 0.605664 | 1_4:+9661372 | None:intergenic |
AGCAACAGCAACAACAGGGT+AGG | 0.605756 | 1_4:-9661206 | Msa0149130:CDS |
AGGGCTCATCTCTTGAATGG+TGG | 0.606617 | 1_4:-9661180 | Msa0149130:CDS |
CTACTATCATCACTGGCAGA+AGG | 0.607982 | 1_4:+9658910 | None:intergenic |
GGTGGTCCTCCATTTCCTCG+TGG | 0.608120 | 1_4:-9658781 | Msa0149130:CDS |
AAAGGTTTACTCACTGTGAG+TGG | 0.609300 | 1_4:+9659782 | None:intergenic |
AGACATGCTGAAAGAAAGAG+AGG | 0.610241 | 1_4:+9663102 | None:intergenic |
TCCATGATTACCTTGTGAAG+AGG | 0.610323 | 1_4:-9662612 | Msa0149130:CDS |
AATATGGGCGTAGGTAAGGA+TGG | 0.611082 | 1_4:-9658859 | Msa0149130:CDS |
TCTAAAGAAAATTACCCTGA+CGG | 0.611543 | 1_4:+9660877 | None:intergenic |
TGACTACGAGCTTGAACTTG+TGG | 0.613035 | 1_4:+9660240 | None:intergenic |
ATGGTACACCGGCCAGGTCA+AGG | 0.616339 | 1_4:+9653229 | None:intergenic |
AGATGTGGACCGCTTTGTAG+AGG | 0.617490 | 1_4:-9657861 | Msa0149130:CDS |
AGTAACAGTTACAAAAGAGA+GGG | 0.619037 | 1_4:+9663184 | None:intergenic |
GAATGGTGATAATGTTACAA+AGG | 0.624258 | 1_4:+9653071 | None:intergenic |
TATGAAGATGTTGCAAGACG+AGG | 0.625068 | 1_4:+9655302 | None:intergenic |
GGAAGTTGATGAAAAGGCTG+TGG | 0.628184 | 1_4:+9658991 | None:intergenic |
ACAATTTGACTCTGAAAGGG+TGG | 0.630266 | 1_4:-9659805 | Msa0149130:CDS |
GCAACTACCAGGGTCTACTC+CGG | 0.631962 | 1_4:-9660217 | Msa0149130:intron |
GTGGACCGCTTTGTAGAGGA+CGG | 0.632310 | 1_4:-9657857 | Msa0149130:CDS |
TGGTCCTCCATTTCCTCGTG+GGG | 0.634330 | 1_4:-9658779 | Msa0149130:CDS |
GGACGTATGGATGTAAGCAA+AGG | 0.635039 | 1_4:-9657770 | Msa0149130:intron |
GGCGTATGAGTTGAGCCTGA+GGG | 0.635232 | 1_4:+9658111 | None:intergenic |
AGTTGCCGCGTCTTATATCG+AGG | 0.635845 | 1_4:-9662351 | Msa0149130:intron |
TGTATTGAATCCCAGAGCTG+CGG | 0.638089 | 1_4:-9660090 | Msa0149130:CDS |
GTATCCCCACGAGGAAATGG+AGG | 0.651335 | 1_4:+9658775 | None:intergenic |
TAGTGTACCGGAGTAGACCC+TGG | 0.651767 | 1_4:+9660210 | None:intergenic |
TGATGTTGTTGTGTCAACAT+TGG | 0.655149 | 1_4:+9658970 | None:intergenic |
TCCTGCCAATAGCTCAGGAA+CGG | 0.657617 | 1_4:-9658175 | Msa0149130:CDS |
TCAGCAAGATAATAAAGTAG+GGG | 0.658150 | 1_4:-9658490 | Msa0149130:CDS |
CAGCAAGATAATAAAGTAGG+GGG | 0.658348 | 1_4:-9658489 | Msa0149130:CDS |
TGAATTGCAGGGTCACACAA+AGG | 0.659179 | 1_4:-9653890 | Msa0149130:intron |
ACCAACAGTGAAGAATACGT+TGG | 0.659507 | 1_4:+9653712 | None:intergenic |
GATGCCAGGAACTCTCCAGA+AGG | 0.660319 | 1_4:+9653844 | None:intergenic |
GCAAGGAATCTCCCTAGCCG+AGG | 0.665628 | 1_4:+9654473 | None:intergenic |
ACAGACCCTAGAGATCCAGT+TGG | 0.673213 | 1_4:-9657791 | Msa0149130:CDS |
AAGGTACGAAGCGAATACCC+AGG | 0.675611 | 1_4:+9654765 | None:intergenic |
AGGCGTATGAGTTGAGCCTG+AGG | 0.676286 | 1_4:+9658110 | None:intergenic |
ATTGTACAACAATGGTACAC+CGG | 0.677165 | 1_4:+9653218 | None:intergenic |
CTCGTAGTCAGCAACTACCA+GGG | 0.685612 | 1_4:-9660227 | Msa0149130:CDS |
AAAGTGTCTTCTGATCCTGT+TGG | 0.686159 | 1_4:-9662550 | Msa0149130:intron |
GTTCCTGGCATCTGTCAGTG+AGG | 0.686596 | 1_4:-9653833 | Msa0149130:CDS |
AGATATTGGAGTATTAACAA+TGG | 0.687323 | 1_4:-9654654 | Msa0149130:CDS |
ATGACTCTGTCTGCTCACGA+CGG | 0.693324 | 1_4:-9653337 | Msa0149130:CDS |
GCAGCTATTGACGCTCCGGG+AGG | 0.699589 | 1_4:-9662443 | Msa0149130:intron |
GAGATCCGTCCTCTACAAAG+CGG | 0.708859 | 1_4:+9657852 | None:intergenic |
GGACAGAAACATGAACACAG+AGG | 0.725960 | 1_4:+9663205 | None:intergenic |
CATGTCTCAGACTAACTGGG+AGG | 0.733150 | 1_4:-9663086 | Msa0149130:CDS |
GTTCCAGGATCAAATCAAGG+TGG | 0.734317 | 1_4:-9659830 | Msa0149130:intron |
ACCAACCTCGATATAAGACG+CGG | 0.738906 | 1_4:+9662346 | None:intergenic |
AGCATATCTGTATCCCCACG+AGG | 0.751833 | 1_4:+9658766 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTAATATTAAAATAAA+AGG | + | chr1_4:9656480-9656499 | None:intergenic | 0.0% |
!!! | TTTTTTTCAGTTTTTAAAAA+TGG | - | chr1_4:9653220-9653239 | Msa0149130:three_prime_UTR | 10.0% |
!!! | TTTTTTCAGTTTTTAAAAAT+GGG | - | chr1_4:9653221-9653240 | Msa0149130:three_prime_UTR | 10.0% |
!!! | TTTTGTTCTTTTTATTAATT+TGG | - | chr1_4:9653742-9653761 | Msa0149130:CDS | 10.0% |
!!! | TCTTAATAATCAATTTTTAT+TGG | - | chr1_4:9654193-9654212 | Msa0149130:intron | 10.0% |
!!! | TTTATTGATTTTTCTTTTTT+CGG | - | chr1_4:9655395-9655414 | Msa0149130:CDS | 10.0% |
!! | AAATAAAACTTTATTCTTTA+AGG | + | chr1_4:9655757-9655776 | None:intergenic | 10.0% |
!! | ATTTATTAGATACAAATATT+GGG | + | chr1_4:9657112-9657131 | None:intergenic | 10.0% |
!! | AAATTATGATAGATAAAATT+TGG | + | chr1_4:9658508-9658527 | None:intergenic | 10.0% |
!! | TTATAAACAATAATTATTGA+GGG | - | chr1_4:9659647-9659666 | Msa0149130:intron | 10.0% |
!!! | ATTTTGTTTTTTGATGATTT+AGG | - | chr1_4:9653261-9653280 | Msa0149130:CDS | 15.0% |
!! | TATTCGTGTATTATTATATA+AGG | - | chr1_4:9654051-9654070 | Msa0149130:intron | 15.0% |
!! | GTATTATTATATAAGGAATA+AGG | - | chr1_4:9654058-9654077 | Msa0149130:intron | 15.0% |
!!! | AGTTAACAATCAATTTTTAT+TGG | - | chr1_4:9654267-9654286 | Msa0149130:intron | 15.0% |
!! | GCAAAAATATAAAAACAAAT+CGG | + | chr1_4:9654574-9654593 | None:intergenic | 15.0% |
!!! | TGTTATTAGGTTTTTATATT+GGG | - | chr1_4:9656815-9656834 | Msa0149130:intron | 15.0% |
!! | CATTTATTAGATACAAATAT+TGG | + | chr1_4:9657113-9657132 | None:intergenic | 15.0% |
!! | AAATTTATATGCAAATGTAA+TGG | + | chr1_4:9658537-9658556 | None:intergenic | 15.0% |
!! | AATTTAACATGTATATATAC+CGG | + | chr1_4:9658562-9658581 | None:intergenic | 15.0% |
!! | TTGTAAAATTTATAAACAGT+AGG | - | chr1_4:9659406-9659425 | Msa0149130:intron | 15.0% |
!!! | AACTAAACTATAAGTTTTTT+TGG | + | chr1_4:9659538-9659557 | None:intergenic | 15.0% |
!! | AAAAACTTATAGTTTAGTTA+TGG | - | chr1_4:9659539-9659558 | Msa0149130:intron | 15.0% |
!! | AAAACTTATAGTTTAGTTAT+GGG | - | chr1_4:9659540-9659559 | Msa0149130:intron | 15.0% |
!! | GTTATAAACAATAATTATTG+AGG | - | chr1_4:9659646-9659665 | Msa0149130:intron | 15.0% |
!! | TATAAACAATAATTATTGAG+GGG | - | chr1_4:9659648-9659667 | Msa0149130:intron | 15.0% |
!!! | ATTCATGTAATATTTTGATA+AGG | - | chr1_4:9660137-9660156 | Msa0149130:intron | 15.0% |
!!! | TTCCTATATATAAATTTTGA+TGG | - | chr1_4:9661383-9661402 | Msa0149130:CDS | 15.0% |
!! | ATCCATCAAAATTTATATAT+AGG | + | chr1_4:9661388-9661407 | None:intergenic | 15.0% |
!!! | TATATTTTTTTTCACCAATT+AGG | - | chr1_4:9661719-9661738 | Msa0149130:intron | 15.0% |
!!! | ATATTTTTTTTCACCAATTA+GGG | - | chr1_4:9661720-9661739 | Msa0149130:intron | 15.0% |
!! | AGGAAAAAGAAAAAAAAAAA+AGG | + | chr1_4:9662585-9662604 | None:intergenic | 15.0% |
!!! | TTTTTTTGGTATTGATTTAT+AGG | - | chr1_4:9662628-9662647 | Msa0149130:CDS | 15.0% |
!! | ATAGGTAAAACTTATAATAT+AGG | - | chr1_4:9662646-9662665 | Msa0149130:intron | 15.0% |
!! | TTTAGCTATAATTATTAGAA+TGG | - | chr1_4:9662759-9662778 | Msa0149130:intron | 15.0% |
!! | GAAGAAAAAAAAAATCGAAA+TGG | + | chr1_4:9652994-9653013 | None:intergenic | 20.0% |
!!! | TTTTGTATGCTTTAATGATT+TGG | - | chr1_4:9653290-9653309 | Msa0149130:CDS | 20.0% |
!! | TTTGTATGCTTTAATGATTT+GGG | - | chr1_4:9653291-9653310 | Msa0149130:CDS | 20.0% |
!!! | TTTTAGATTATGCAAGTAAA+AGG | - | chr1_4:9653401-9653420 | Msa0149130:intron | 20.0% |
!! | TTTAGATTATGCAAGTAAAA+GGG | - | chr1_4:9653402-9653421 | Msa0149130:intron | 20.0% |
!! | TTGAATGAAATTGTTACATT+TGG | - | chr1_4:9653452-9653471 | Msa0149130:intron | 20.0% |
!!! | GGATTTTTTTGTTTTTGTAA+TGG | - | chr1_4:9653763-9653782 | Msa0149130:CDS | 20.0% |
!!! | ATAATCAATTTTTATTGGAC+AGG | - | chr1_4:9654198-9654217 | Msa0149130:intron | 20.0% |
!! | AATTGAAATTTCTTATTCCT+GGG | + | chr1_4:9654700-9654719 | None:intergenic | 20.0% |
!! | AAATTGAAATTTCTTATTCC+TGG | + | chr1_4:9654701-9654720 | None:intergenic | 20.0% |
!! | AGGAATAAGAAATTTCAATT+TGG | - | chr1_4:9654700-9654719 | Msa0149130:CDS | 20.0% |
!! | GGAATAAGAAATTTCAATTT+GGG | - | chr1_4:9654701-9654720 | Msa0149130:CDS | 20.0% |
!! | ATTAATTTAACTATTGCTGT+TGG | - | chr1_4:9656491-9656510 | Msa0149130:intron | 20.0% |
!! | TTGAAGAATGGTATTTATAT+TGG | + | chr1_4:9656552-9656571 | None:intergenic | 20.0% |
!! | ATATTAAGTTCTCTGTTATT+AGG | - | chr1_4:9656802-9656821 | Msa0149130:intron | 20.0% |
!!! | CTGTTATTAGGTTTTTATAT+TGG | - | chr1_4:9656814-9656833 | Msa0149130:intron | 20.0% |
!! | ATCTAAGTTCTACATTTATA+AGG | + | chr1_4:9656883-9656902 | None:intergenic | 20.0% |
!!! | TTCTGATACCATTTTATATT+GGG | - | chr1_4:9656983-9657002 | Msa0149130:intron | 20.0% |
!! | TGAAAAGAATATAAAAAGAG+GGG | + | chr1_4:9657054-9657073 | None:intergenic | 20.0% |
!! | CTGAAAAGAATATAAAAAGA+GGG | + | chr1_4:9657055-9657074 | None:intergenic | 20.0% |
!! | AAATAATGTAAAGTCTGAAA+TGG | - | chr1_4:9657954-9657973 | Msa0149130:intron | 20.0% |
!!! | AATAATGTAAAGTCTGAAAT+GGG | - | chr1_4:9657955-9657974 | Msa0149130:intron | 20.0% |
!!! | CATTTGCATATAAATTTTTC+CGG | - | chr1_4:9658540-9658559 | Msa0149130:CDS | 20.0% |
!! | ATTAAAAGTTTCTTTCTGAA+TGG | - | chr1_4:9658588-9658607 | Msa0149130:CDS | 20.0% |
!! | ATAAACAATAATTATTGAGG+GGG | - | chr1_4:9659649-9659668 | Msa0149130:intron | 20.0% |
!!! | AGCTACTTTTTTCAATTATT+AGG | + | chr1_4:9659786-9659805 | None:intergenic | 20.0% |
!!! | TGTAATATTTTGATAAGGAA+AGG | - | chr1_4:9660142-9660161 | Msa0149130:intron | 20.0% |
!! | TAAAAAAACGAAAACATCTA+AGG | - | chr1_4:9660261-9660280 | Msa0149130:CDS | 20.0% |
!! | TGCTATATGGTAATATTATT+CGG | + | chr1_4:9660357-9660376 | None:intergenic | 20.0% |
!!! | ATTTGTTGACTTTCATAAAA+AGG | - | chr1_4:9660481-9660500 | Msa0149130:intron | 20.0% |
!! | AATAAATGATACAAAAGTTC+TGG | + | chr1_4:9660781-9660800 | None:intergenic | 20.0% |
!!! | CATTCATTTAGGTTTATTTA+AGG | - | chr1_4:9661283-9661302 | Msa0149130:CDS | 20.0% |
!!! | ATTTAGGTTTATTTAAGGTT+TGG | - | chr1_4:9661288-9661307 | Msa0149130:CDS | 20.0% |
!!! | TTTAGGTTTATTTAAGGTTT+GGG | - | chr1_4:9661289-9661308 | Msa0149130:CDS | 20.0% |
!! | CTATAGATATTCATAAAACA+AGG | + | chr1_4:9662071-9662090 | None:intergenic | 20.0% |
!! | CAAAGTAAATACATGTTATT+TGG | + | chr1_4:9662794-9662813 | None:intergenic | 20.0% |
!! | AAAAACCAAAAACATAAAAG+GGG | + | chr1_4:9663101-9663120 | None:intergenic | 20.0% |
!! | CAAAAACCAAAAACATAAAA+GGG | + | chr1_4:9663102-9663121 | None:intergenic | 20.0% |
!! | ATTGTTACATAGAAAAAAGA+GGG | + | chr1_4:9663141-9663160 | None:intergenic | 20.0% |
!! | TATTGTTACATAGAAAAAAG+AGG | + | chr1_4:9663142-9663161 | None:intergenic | 20.0% |
!! | ATATTATATTGTCCAATTTG+AGG | + | chr1_4:9663227-9663246 | None:intergenic | 20.0% |
! | TATATAAAACTGAAGAACAC+AGG | + | chr1_4:9653200-9653219 | None:intergenic | 25.0% |
! | TTGTATGCTTTAATGATTTG+GGG | - | chr1_4:9653292-9653311 | Msa0149130:CDS | 25.0% |
! | GTTTATTTCATCATTGTTTC+TGG | - | chr1_4:9653318-9653337 | Msa0149130:CDS | 25.0% |
!!! | AATGTGTGAAGATATTTTGA+TGG | - | chr1_4:9653365-9653384 | Msa0149130:CDS | 25.0% |
!!! | ATGTGTGAAGATATTTTGAT+GGG | - | chr1_4:9653366-9653385 | Msa0149130:CDS | 25.0% |
!!! | ATATTTTGATGGGTATGTTA+GGG | - | chr1_4:9653376-9653395 | Msa0149130:CDS | 25.0% |
!! | AAATGTTTGTTTCTTGCATT+AGG | - | chr1_4:9653481-9653500 | Msa0149130:intron | 25.0% |
!! | AATGTTTGTTTCTTGCATTA+GGG | - | chr1_4:9653482-9653501 | Msa0149130:intron | 25.0% |
! | GACTAGAAGTAATCTAAATA+CGG | + | chr1_4:9653941-9653960 | None:intergenic | 25.0% |
! | ATAAAACACGGAATCAAATA+AGG | - | chr1_4:9654002-9654021 | Msa0149130:intron | 25.0% |
!! | ACAATCAATTTTTATTGGAC+AGG | - | chr1_4:9654272-9654291 | Msa0149130:intron | 25.0% |
!! | TTGTGATTATGACTATTTTG+TGG | - | chr1_4:9654338-9654357 | Msa0149130:intron | 25.0% |
! | TGATTTAATCAGTAAAAGTG+AGG | + | chr1_4:9654374-9654393 | None:intergenic | 25.0% |
! | CAAAGCTAGGAAAAAAAAAA+AGG | - | chr1_4:9654460-9654479 | Msa0149130:CDS | 25.0% |
! | GAAAAAAAAAAAGGAGAAGT+TGG | - | chr1_4:9654469-9654488 | Msa0149130:CDS | 25.0% |
! | TTATGCAATTTAACAAAGCA+TGG | + | chr1_4:9654656-9654675 | None:intergenic | 25.0% |
! | TCATCTTATATTTACACAAC+CGG | + | chr1_4:9655218-9655237 | None:intergenic | 25.0% |
!!! | AACTTTATTCTTTAAGGTCA+TGG | + | chr1_4:9655751-9655770 | None:intergenic | 25.0% |
! | AGAGAAATAGAAAATTGAAC+AGG | + | chr1_4:9655882-9655901 | None:intergenic | 25.0% |
!! | TGTGTTATTCTTTATAGCAA+TGG | - | chr1_4:9655907-9655926 | Msa0149130:intron | 25.0% |
!!! | CTTGATTTTTTGTTGTACAT+AGG | - | chr1_4:9656624-9656643 | Msa0149130:intron | 25.0% |
!!! | ATTTTTTGTTGTACATAGGA+AGG | - | chr1_4:9656628-9656647 | Msa0149130:intron | 25.0% |
!!! | TTTTTTGTTGTACATAGGAA+GGG | - | chr1_4:9656629-9656648 | Msa0149130:intron | 25.0% |
!! | GTTCTGATACCATTTTATAT+TGG | - | chr1_4:9656982-9657001 | Msa0149130:intron | 25.0% |
! | GATTTAGACCCAATATAAAA+TGG | + | chr1_4:9656994-9657013 | None:intergenic | 25.0% |
! | CTAAATCATCCTTACAAAAT+TGG | - | chr1_4:9657007-9657026 | Msa0149130:intron | 25.0% |
! | CCTGAAAAGAATATAAAAAG+AGG | + | chr1_4:9657056-9657075 | None:intergenic | 25.0% |
!! | CCTCTTTTTATATTCTTTTC+AGG | - | chr1_4:9657053-9657072 | Msa0149130:intron | 25.0% |
!! | AACATTTTCCTTTCCATAAT+AGG | - | chr1_4:9657171-9657190 | Msa0149130:intron | 25.0% |
!! | ACATTTTCCTTTCCATAATA+GGG | - | chr1_4:9657172-9657191 | Msa0149130:intron | 25.0% |
!!! | CTCTTGAGGATTTTTTAAAA+AGG | + | chr1_4:9657572-9657591 | None:intergenic | 25.0% |
!!! | ATAAAACATTTTGACTCTTG+AGG | + | chr1_4:9657586-9657605 | None:intergenic | 25.0% |
! | ATCAGCAAGATAATAAAGTA+GGG | - | chr1_4:9657750-9657769 | Msa0149130:intron | 25.0% |
! | GTTTATCTTAAGGAATCATT+GGG | - | chr1_4:9657898-9657917 | Msa0149130:intron | 25.0% |
! | TTCCATCTGATTTCAATTAA+TGG | - | chr1_4:9658276-9658295 | Msa0149130:intron | 25.0% |
! | TTCCATTAATTGAAATCAGA+TGG | + | chr1_4:9658281-9658300 | None:intergenic | 25.0% |
! | ATCTGATTTCAATTAATGGA+AGG | - | chr1_4:9658280-9658299 | Msa0149130:intron | 25.0% |
!! | TCAGAAAGAAACTTTTAATG+AGG | + | chr1_4:9658587-9658606 | None:intergenic | 25.0% |
! | TGAAACAAAAGATGAAAATG+AGG | - | chr1_4:9658835-9658854 | Msa0149130:CDS | 25.0% |
!! | GATAAGTATTTAAGCACTTT+TGG | - | chr1_4:9658886-9658905 | Msa0149130:CDS | 25.0% |
! | ACTTAAAAGCTAGTTATCAA+GGG | - | chr1_4:9658916-9658935 | Msa0149130:CDS | 25.0% |
! | AGAGTTAGATACTTATCAAT+TGG | + | chr1_4:9659121-9659140 | None:intergenic | 25.0% |
! | GTAATAAACTGCATAAGTAA+TGG | - | chr1_4:9659586-9659605 | Msa0149130:intron | 25.0% |
! | TAAACAATAATTATTGAGGG+GGG | - | chr1_4:9659650-9659669 | Msa0149130:intron | 25.0% |
! | TATATGGTAATATTATTCGG+GGG | + | chr1_4:9660354-9660373 | None:intergenic | 25.0% |
! | CTATATGGTAATATTATTCG+GGG | + | chr1_4:9660355-9660374 | None:intergenic | 25.0% |
! | GCTATATGGTAATATTATTC+GGG | + | chr1_4:9660356-9660375 | None:intergenic | 25.0% |
! | AAAATTGTGTCTATGCTATA+TGG | + | chr1_4:9660370-9660389 | None:intergenic | 25.0% |
! | AGAATATTGTTCATGTAGAA+CGG | + | chr1_4:9660400-9660419 | None:intergenic | 25.0% |
! | TACATGAACAATATTCTTAG+TGG | - | chr1_4:9660403-9660422 | Msa0149130:intron | 25.0% |
!!! | CATGAGTTTTCTTTATTTCT+AGG | - | chr1_4:9660533-9660552 | Msa0149130:intron | 25.0% |
!!! | CACATTTTCTGAAGTAAATT+CGG | - | chr1_4:9660559-9660578 | Msa0149130:intron | 25.0% |
! | CTGTAGATAATTGAAGTTTA+TGG | - | chr1_4:9661165-9661184 | Msa0149130:CDS | 25.0% |
! | AACGTTCTTTATATTATCAC+AGG | - | chr1_4:9661312-9661331 | Msa0149130:CDS | 25.0% |
!! | AGATATTGGAGTATTAACAA+TGG | - | chr1_4:9661587-9661606 | Msa0149130:intron | 25.0% |
!! | AAATCTTGAAGTCTTTTTGT+TGG | - | chr1_4:9661872-9661891 | Msa0149130:intron | 25.0% |
!! | AATCATTTGAAATGTCATTG+AGG | + | chr1_4:9661907-9661926 | None:intergenic | 25.0% |
!! | GTTTTGTAAAATATGAAGAG+TGG | - | chr1_4:9661989-9662008 | Msa0149130:intron | 25.0% |
! | TAATAAGAATCAAACACTTC+TGG | - | chr1_4:9662192-9662211 | Msa0149130:intron | 25.0% |
! | AACATGCTGATATTACTATT+CGG | - | chr1_4:9662316-9662335 | Msa0149130:intron | 25.0% |
!!! | TTTTTCCTTTTGAGTATGTT+TGG | - | chr1_4:9662597-9662616 | Msa0149130:CDS | 25.0% |
!!! | GTTTGGATTCACAATTTTTT+TGG | - | chr1_4:9662614-9662633 | Msa0149130:CDS | 25.0% |
! | GAACACAATTTATACAGAAA+AGG | + | chr1_4:9662692-9662711 | None:intergenic | 25.0% |
! | AACATTGTATTGTACAACAA+TGG | + | chr1_4:9663034-9663053 | None:intergenic | 25.0% |
! | GCAAAAACCAAAAACATAAA+AGG | + | chr1_4:9663103-9663122 | None:intergenic | 25.0% |
!!! | ATGTTTTTGTATCCTCAAAT+TGG | - | chr1_4:9663212-9663231 | Msa0149130:five_prime_UTR | 25.0% |
AGAAAAGAAAGAGGAATTTG+AGG | + | chr1_4:9653016-9653035 | None:intergenic | 30.0% | |
AGTAACAGTTACAAAAGAGA+GGG | + | chr1_4:9653060-9653079 | None:intergenic | 30.0% | |
AAGTAACAGTTACAAAAGAG+AGG | + | chr1_4:9653061-9653080 | None:intergenic | 30.0% | |
!!! | AGGTTGATGAGTTTTTCTAA+TGG | + | chr1_4:9653091-9653110 | None:intergenic | 30.0% |
AAGAAAGAGAGGAAATTGAA+GGG | + | chr1_4:9653131-9653150 | None:intergenic | 30.0% | |
AAAGAAAGAGAGGAAATTGA+AGG | + | chr1_4:9653132-9653151 | None:intergenic | 30.0% | |
!!! | GATATTTTGATGGGTATGTT+AGG | - | chr1_4:9653375-9653394 | Msa0149130:CDS | 30.0% |
TGATGTAAAGATCTAAGCTT+TGG | - | chr1_4:9653535-9653554 | Msa0149130:intron | 30.0% | |
!! | TGTTTTTGTAATGGTGATGT+TGG | - | chr1_4:9653772-9653791 | Msa0149130:CDS | 30.0% |
GAAAGTTAAGATGCACAATT+TGG | + | chr1_4:9654113-9654132 | None:intergenic | 30.0% | |
GTTGTCATGTAAAACTACAA+TGG | - | chr1_4:9654420-9654439 | Msa0149130:CDS | 30.0% | |
TTTAACAAAGCATGGAAAGT+AGG | + | chr1_4:9654648-9654667 | None:intergenic | 30.0% | |
TAATTAACTGAGTCTGCAAA+AGG | + | chr1_4:9654808-9654827 | None:intergenic | 30.0% | |
TTTGCAGACTCAGTTAATTA+AGG | - | chr1_4:9654808-9654827 | Msa0149130:intron | 30.0% | |
TATAGCAACAAAGATGTATG+AGG | - | chr1_4:9655126-9655145 | Msa0149130:intron | 30.0% | |
! | TTCAGTATTGAAGCATGATT+TGG | + | chr1_4:9655322-9655341 | None:intergenic | 30.0% |
TCTAAAGAAAATTACCCTGA+CGG | + | chr1_4:9655367-9655386 | None:intergenic | 30.0% | |
!!! | GGGTAATTTTCTTTAGAACT+TGG | - | chr1_4:9655370-9655389 | Msa0149130:CDS | 30.0% |
! | GTTCGGCAATTATTTGAAAT+TGG | - | chr1_4:9655715-9655734 | Msa0149130:intron | 30.0% |
!! | TTATTCTTTAAGGTCATGGA+AGG | + | chr1_4:9655747-9655766 | None:intergenic | 30.0% |
AAATATCATAGTGATGCTTC+GGG | + | chr1_4:9655824-9655843 | None:intergenic | 30.0% | |
CAAATATCATAGTGATGCTT+CGG | + | chr1_4:9655825-9655844 | None:intergenic | 30.0% | |
TTGCCTGAAATCAAGAAATT+CGG | + | chr1_4:9655951-9655970 | None:intergenic | 30.0% | |
!! | CACTTTTTATGATAGTGTAC+CGG | + | chr1_4:9656046-9656065 | None:intergenic | 30.0% |
TTACTATATGTCCTATTTGC+TGG | - | chr1_4:9656078-9656097 | Msa0149130:intron | 30.0% | |
! | TTTTATATCCTGATTCCAAG+TGG | + | chr1_4:9656117-9656136 | None:intergenic | 30.0% |
TAACTCAATGAAAGATTACC+AGG | + | chr1_4:9656203-9656222 | None:intergenic | 30.0% | |
! | TGTGTTATTACTGCAAAAAC+TGG | - | chr1_4:9656243-9656262 | Msa0149130:intron | 30.0% |
TTATTCATTACCTTATTGCG+TGG | - | chr1_4:9656302-9656321 | Msa0149130:intron | 30.0% | |
TATTCATTACCTTATTGCGT+GGG | - | chr1_4:9656303-9656322 | Msa0149130:intron | 30.0% | |
!!! | TATTTTGGGATATAATGCGA+AGG | - | chr1_4:9656328-9656347 | Msa0149130:intron | 30.0% |
TGGCAATAATGATCAAGTTT+AGG | + | chr1_4:9656532-9656551 | None:intergenic | 30.0% | |
!! | AACTTGGTGCATCAATAATT+TGG | - | chr1_4:9656939-9656958 | Msa0149130:intron | 30.0% |
GGTATCAGAACTTATTCATT+CGG | + | chr1_4:9656973-9656992 | None:intergenic | 30.0% | |
!! | AACATTGGAAGTTGATGAAA+AGG | + | chr1_4:9657259-9657278 | None:intergenic | 30.0% |
CTACTGAATACTCGAAATAT+GGG | - | chr1_4:9657367-9657386 | Msa0149130:intron | 30.0% | |
CATCAGCAAGATAATAAAGT+AGG | - | chr1_4:9657749-9657768 | Msa0149130:intron | 30.0% | |
TCAGCAAGATAATAAAGTAG+GGG | - | chr1_4:9657751-9657770 | Msa0149130:intron | 30.0% | |
GGAATAGAAGTCACAATAAA+AGG | + | chr1_4:9657845-9657864 | None:intergenic | 30.0% | |
CGTTTATCTTAAGGAATCAT+TGG | - | chr1_4:9657897-9657916 | Msa0149130:intron | 30.0% | |
!! | TTTTGTTCTGAATGAACTCA+AGG | - | chr1_4:9657991-9658010 | Msa0149130:intron | 30.0% |
TTAGAAGAACTACCATTATG+AGG | + | chr1_4:9658184-9658203 | None:intergenic | 30.0% | |
TCAGTGCTAAACATCATTAA+TGG | + | chr1_4:9658208-9658227 | None:intergenic | 30.0% | |
! | TTAATGATGTTTAGCACTGA+TGG | - | chr1_4:9658208-9658227 | Msa0149130:CDS | 30.0% |
TGATAAGGATATTGAATTGC+AGG | - | chr1_4:9658356-9658375 | Msa0149130:intron | 30.0% | |
AAGACCATTCATGTTCTTAT+TGG | - | chr1_4:9658708-9658727 | Msa0149130:intron | 30.0% | |
TGTTTCACTCGTCTTTAATA+GGG | + | chr1_4:9658822-9658841 | None:intergenic | 30.0% | |
TTGTTTCACTCGTCTTTAAT+AGG | + | chr1_4:9658823-9658842 | None:intergenic | 30.0% | |
!!! | GATAACTAGCTTTTAAGTGA+GGG | + | chr1_4:9658914-9658933 | None:intergenic | 30.0% |
!!! | TGATAACTAGCTTTTAAGTG+AGG | + | chr1_4:9658915-9658934 | None:intergenic | 30.0% |
CACTTAAAAGCTAGTTATCA+AGG | - | chr1_4:9658915-9658934 | Msa0149130:CDS | 30.0% | |
CTTAAAAGCTAGTTATCAAG+GGG | - | chr1_4:9658917-9658936 | Msa0149130:CDS | 30.0% | |
TTAAAAGCTAGTTATCAAGG+GGG | - | chr1_4:9658918-9658937 | Msa0149130:CDS | 30.0% | |
!! | CAACGCTTTATTCATCTTTT+CGG | - | chr1_4:9659041-9659060 | Msa0149130:CDS | 30.0% |
!! | AACGCTTTATTCATCTTTTC+GGG | - | chr1_4:9659042-9659061 | Msa0149130:CDS | 30.0% |
TTATCAATTGGTATCAGATC+TGG | + | chr1_4:9659109-9659128 | None:intergenic | 30.0% | |
TACTCGGGGTTATTTAATAT+TGG | - | chr1_4:9659436-9659455 | Msa0149130:intron | 30.0% | |
ACTCGGGGTTATTTAATATT+GGG | - | chr1_4:9659437-9659456 | Msa0149130:intron | 30.0% | |
GGGTTATTTAATATTGGGAT+TGG | - | chr1_4:9659442-9659461 | Msa0149130:intron | 30.0% | |
TTATAGTTTAGTTATGGGCT+TGG | - | chr1_4:9659545-9659564 | Msa0149130:intron | 30.0% | |
! | ATGTTCGGTGGAATATTTAA+GGG | + | chr1_4:9659687-9659706 | None:intergenic | 30.0% |
ATATGGTAATATTATTCGGG+GGG | + | chr1_4:9660353-9660372 | None:intergenic | 30.0% | |
TTAGTGGTATCAGTTAGAAA+GGG | - | chr1_4:9660419-9660438 | Msa0149130:intron | 30.0% | |
! | AGCATTAAAACATGCTTTTC+CGG | + | chr1_4:9660682-9660701 | None:intergenic | 30.0% |
!! | TTGTTTTGCAATTTTCAAGC+AGG | + | chr1_4:9660755-9660774 | None:intergenic | 30.0% |
TCGAATCTTGTACAGATAAA+TGG | - | chr1_4:9661020-9661039 | Msa0149130:intron | 30.0% | |
ATTGCTAGGTTCATTCATTT+AGG | - | chr1_4:9661272-9661291 | Msa0149130:CDS | 30.0% | |
CAGATAAGGTCATCTTTATT+AGG | + | chr1_4:9661542-9661561 | None:intergenic | 30.0% | |
!!! | TTTTTTTTCACCAATTAGGG+TGG | - | chr1_4:9661723-9661742 | Msa0149130:intron | 30.0% |
! | AACCAACCTTTAGAGAATAT+CGG | + | chr1_4:9661845-9661864 | None:intergenic | 30.0% |
! | GAAGTCTTTTTGTTGGATTT+AGG | - | chr1_4:9661879-9661898 | Msa0149130:intron | 30.0% |
TAGAAGAGATCAAATTACAC+CGG | + | chr1_4:9662038-9662057 | None:intergenic | 30.0% | |
AAACATGTATAGTTCCATGT+AGG | - | chr1_4:9662102-9662121 | Msa0149130:intron | 30.0% | |
!! | AGTCTTTTTCATACTCTTCT+TGG | - | chr1_4:9662292-9662311 | Msa0149130:intron | 30.0% |
!! | GTCTTTTTCATACTCTTCTT+GGG | - | chr1_4:9662293-9662312 | Msa0149130:intron | 30.0% |
AATATGTTCCTATGAATTGC+AGG | - | chr1_4:9662339-9662358 | Msa0149130:intron | 30.0% | |
ATATGTTCCTATGAATTGCA+GGG | - | chr1_4:9662340-9662359 | Msa0149130:intron | 30.0% | |
TGAATCCAAACATACTCAAA+AGG | + | chr1_4:9662605-9662624 | None:intergenic | 30.0% | |
AAAGGATTTCAAGATCAAAG+TGG | + | chr1_4:9662674-9662693 | None:intergenic | 30.0% | |
GTTCAGAAATCTACTCTATT+TGG | - | chr1_4:9662708-9662727 | Msa0149130:intron | 30.0% | |
AGAAATCTACTCTATTTGGT+TGG | - | chr1_4:9662712-9662731 | Msa0149130:intron | 30.0% | |
! | GAATGGTGATAATGTTACAA+AGG | + | chr1_4:9663173-9663192 | None:intergenic | 30.0% |
! | ATCACCATTCTTGTTTACTT+TGG | - | chr1_4:9663183-9663202 | Msa0149130:five_prime_UTR | 30.0% |
ATCTCCAAAGTAAACAAGAA+TGG | + | chr1_4:9663190-9663209 | None:intergenic | 30.0% | |
! | ATGCTTCAATTTGAGATAAG+CGG | + | chr1_4:9663267-9663286 | None:intergenic | 30.0% |
!! | GGGTATTGAAGAAATGAAAG+AGG | + | chr1_4:9653111-9653130 | None:intergenic | 35.0% |
! | ATGCTTTAATGATTTGGGGT+TGG | - | chr1_4:9653296-9653315 | Msa0149130:CDS | 35.0% |
TGCTTGTGTTGTGATATTTC+AGG | - | chr1_4:9653593-9653612 | Msa0149130:intron | 35.0% | |
! | TGTGTTGTGATATTTCAGGT+TGG | - | chr1_4:9653597-9653616 | Msa0149130:intron | 35.0% |
! | CTTTGTTATAACTCACCAAC+AGG | + | chr1_4:9653709-9653728 | None:intergenic | 35.0% |
TCTAAATACGGAAAAGAACG+TGG | + | chr1_4:9653929-9653948 | None:intergenic | 35.0% | |
GAAGTTCAGCGAATAAAACA+CGG | - | chr1_4:9653990-9654009 | Msa0149130:intron | 35.0% | |
ACGGAATCAAATAAGGAAGT+TGG | - | chr1_4:9654009-9654028 | Msa0149130:intron | 35.0% | |
ACGAATAGATACAGCGAAAA+AGG | + | chr1_4:9654038-9654057 | None:intergenic | 35.0% | |
TATGCGTTGTTTAGCTGTTA+GGG | - | chr1_4:9654155-9654174 | Msa0149130:intron | 35.0% | |
CATGTAAAACTACAATGGCA+TGG | - | chr1_4:9654425-9654444 | Msa0149130:CDS | 35.0% | |
GTAACTTTGAATGCAAAGCT+AGG | - | chr1_4:9654447-9654466 | Msa0149130:CDS | 35.0% | |
TATTCCTGGGCAAAAACAAA+AGG | + | chr1_4:9654687-9654706 | None:intergenic | 35.0% | |
CAACAAAGATGTATGAGGAA+AGG | - | chr1_4:9655131-9655150 | Msa0149130:intron | 35.0% | |
GTTAAAACTTCCCCTTCAAA+GGG | - | chr1_4:9655153-9655172 | Msa0149130:intron | 35.0% | |
TTCCAAAGAATCCCTTTGAA+GGG | + | chr1_4:9655167-9655186 | None:intergenic | 35.0% | |
TATTCCGTACAGCAAAGATT+TGG | - | chr1_4:9655280-9655299 | Msa0149130:CDS | 35.0% | |
! | CTATACTACCTTCTGTTTTG+GGG | + | chr1_4:9655443-9655462 | None:intergenic | 35.0% |
! | GCTATACTACCTTCTGTTTT+GGG | + | chr1_4:9655444-9655463 | None:intergenic | 35.0% |
TTCAGTGATCACGAAAATAG+TGG | + | chr1_4:9655584-9655603 | None:intergenic | 35.0% | |
AACTATCTGACTGTTATAGC+GGG | + | chr1_4:9655666-9655685 | None:intergenic | 35.0% | |
GAACTATCTGACTGTTATAG+CGG | + | chr1_4:9655667-9655686 | None:intergenic | 35.0% | |
AACAGTCAGATAGTTCTCTT+TGG | - | chr1_4:9655671-9655690 | Msa0149130:CDS | 35.0% | |
AATATCATAGTGATGCTTCG+GGG | + | chr1_4:9655823-9655842 | None:intergenic | 35.0% | |
ACACCGAATTTCTTGATTTC+AGG | - | chr1_4:9655945-9655964 | Msa0149130:intron | 35.0% | |
AATTGCCATCAATGATCCTT+CGG | + | chr1_4:9656180-9656199 | None:intergenic | 35.0% | |
ATTCATTACCTTATTGCGTG+GGG | - | chr1_4:9656304-9656323 | Msa0149130:intron | 35.0% | |
! | TTATTGCGTGGGGATATTTT+GGG | - | chr1_4:9656314-9656333 | Msa0149130:intron | 35.0% |
TGCTCACAGATTAAGTTAAC+AGG | - | chr1_4:9656376-9656395 | Msa0149130:intron | 35.0% | |
!! | AGGATACTTTTGTTTGTTCC+AGG | - | chr1_4:9656396-9656415 | Msa0149130:intron | 35.0% |
TTTGTTCCAGGATCAAATCA+AGG | - | chr1_4:9656408-9656427 | Msa0149130:intron | 35.0% | |
! | GCAACAATTTGACTCTGAAA+GGG | - | chr1_4:9656433-9656452 | Msa0149130:intron | 35.0% |
! | CACACAATCACTTTGAAGAA+TGG | + | chr1_4:9656564-9656583 | None:intergenic | 35.0% |
! | ATCCACTTGATAATAGCCAA+GGG | + | chr1_4:9656686-9656705 | None:intergenic | 35.0% |
TAACAGATACAAGCATAGGA+GGG | + | chr1_4:9656716-9656735 | None:intergenic | 35.0% | |
TTAACAGATACAAGCATAGG+AGG | + | chr1_4:9656717-9656736 | None:intergenic | 35.0% | |
AGGTTAACAGATACAAGCAT+AGG | + | chr1_4:9656720-9656739 | None:intergenic | 35.0% | |
TGCTAGACTCTTCAGATAAT+AGG | + | chr1_4:9656776-9656795 | None:intergenic | 35.0% | |
AAGTGTAGTAACGATGAGTT+AGG | + | chr1_4:9656841-9656860 | None:intergenic | 35.0% | |
GTTACTACACTTGTAAGTGA+GGG | - | chr1_4:9656849-9656868 | Msa0149130:intron | 35.0% | |
TTACTACACTTGTAAGTGAG+GGG | - | chr1_4:9656850-9656869 | Msa0149130:intron | 35.0% | |
TTGGTGCATCAATAATTTGG+TGG | - | chr1_4:9656942-9656961 | Msa0149130:intron | 35.0% | |
TGGTGCATCAATAATTTGGT+GGG | - | chr1_4:9656943-9656962 | Msa0149130:intron | 35.0% | |
! | CCTTACAAGCCAATTTTGTA+AGG | + | chr1_4:9657019-9657038 | None:intergenic | 35.0% |
!! | CCTTACAAAATTGGCTTGTA+AGG | - | chr1_4:9657016-9657035 | Msa0149130:intron | 35.0% |
!! | AAAATTGGCTTGTAAGGTGA+GGG | - | chr1_4:9657022-9657041 | Msa0149130:intron | 35.0% |
!! | GCCTTATTTACTCTCAATGT+GGG | - | chr1_4:9657075-9657094 | Msa0149130:intron | 35.0% |
TCCCACATTGAGAGTAAATA+AGG | + | chr1_4:9657079-9657098 | None:intergenic | 35.0% | |
TTCCTTTCCATAATAGGGTT+TGG | - | chr1_4:9657177-9657196 | Msa0149130:intron | 35.0% | |
ATCCAAACCCTATTATGGAA+AGG | + | chr1_4:9657182-9657201 | None:intergenic | 35.0% | |
AGTTGATCCAAACCCTATTA+TGG | + | chr1_4:9657187-9657206 | None:intergenic | 35.0% | |
! | GTATGAAAGGTTTTTGTTGC+TGG | + | chr1_4:9657225-9657244 | None:intergenic | 35.0% |
TGATGTTGTTGTGTCAACAT+TGG | + | chr1_4:9657274-9657293 | None:intergenic | 35.0% | |
GCTACTGAATACTCGAAATA+TGG | - | chr1_4:9657366-9657385 | Msa0149130:intron | 35.0% | |
TTTGATACAACATCACCAAC+AGG | + | chr1_4:9657418-9657437 | None:intergenic | 35.0% | |
GGTGATGTTGTATCAAATGT+TGG | - | chr1_4:9657421-9657440 | Msa0149130:intron | 35.0% | |
GGATACAGATATGCTAATGA+AGG | - | chr1_4:9657483-9657502 | Msa0149130:intron | 35.0% | |
CAGCAAGATAATAAAGTAGG+GGG | - | chr1_4:9657752-9657771 | Msa0149130:intron | 35.0% | |
TAAACGAAACCGAGAAATCA+TGG | + | chr1_4:9657883-9657902 | None:intergenic | 35.0% | |
TCTCGGTTTCGTTTATCTTA+AGG | - | chr1_4:9657888-9657907 | Msa0149130:CDS | 35.0% | |
ATGCCTTCTTTACCTCATAA+TGG | - | chr1_4:9658169-9658188 | Msa0149130:CDS | 35.0% | |
CTACCATTATGAGGTAAAGA+AGG | + | chr1_4:9658175-9658194 | None:intergenic | 35.0% | |
GATTGTGATGTGTTGAATGT+AGG | - | chr1_4:9658613-9658632 | Msa0149130:intron | 35.0% | |
AGGACCAATAAGAACATGAA+TGG | + | chr1_4:9658715-9658734 | None:intergenic | 35.0% | |
TTACTCATTGTCTACTCATC+TGG | + | chr1_4:9658781-9658800 | None:intergenic | 35.0% | |
TAAAAGCTAGTTATCAAGGG+GGG | - | chr1_4:9658919-9658938 | Msa0149130:CDS | 35.0% | |
!! | AAGTATCTAACTCTGAAGCA+TGG | - | chr1_4:9659127-9659146 | Msa0149130:intron | 35.0% |
!! | AGTATCTAACTCTGAAGCAT+GGG | - | chr1_4:9659128-9659147 | Msa0149130:intron | 35.0% |
TACCCATACTGGATACATAT+CGG | - | chr1_4:9659170-9659189 | Msa0149130:intron | 35.0% | |
ATCCGATATGTATCCAGTAT+GGG | + | chr1_4:9659175-9659194 | None:intergenic | 35.0% | |
TATCCGATATGTATCCAGTA+TGG | + | chr1_4:9659176-9659195 | None:intergenic | 35.0% | |
TACTGGATACATATCGGATA+TGG | - | chr1_4:9659176-9659195 | Msa0149130:intron | 35.0% | |
ACTGGATACATATCGGATAT+GGG | - | chr1_4:9659177-9659196 | Msa0149130:intron | 35.0% | |
TCAAGTGCGGGAAAAAAAAA+AGG | + | chr1_4:9659231-9659250 | None:intergenic | 35.0% | |
GGAGATTTCAGAAACAAAGA+TGG | - | chr1_4:9659347-9659366 | Msa0149130:intron | 35.0% | |
AAGATGGAGTGATGAAGATT+TGG | - | chr1_4:9659363-9659382 | Msa0149130:intron | 35.0% | |
AACAGTAGGCAAGTAATACT+CGG | - | chr1_4:9659420-9659439 | Msa0149130:intron | 35.0% | |
! | GATGTTCGGTGGAATATTTA+AGG | + | chr1_4:9659688-9659707 | None:intergenic | 35.0% |
ATCGATTAGTATGGGATGTT+CGG | + | chr1_4:9659702-9659721 | None:intergenic | 35.0% | |
! | ATTCCCACATCGATTAGTAT+GGG | + | chr1_4:9659710-9659729 | None:intergenic | 35.0% |
! | AATTCCCACATCGATTAGTA+TGG | + | chr1_4:9659711-9659730 | None:intergenic | 35.0% |
AGGAAAACATCACCAAAACA+AGG | + | chr1_4:9659894-9659913 | None:intergenic | 35.0% | |
!!! | TTGTTTTGGTGATGTTTTCC+TGG | - | chr1_4:9659893-9659912 | Msa0149130:intron | 35.0% |
! | GCTTGAGCTTACTAAACTTT+TGG | + | chr1_4:9660007-9660026 | None:intergenic | 35.0% |
ATAAGGAAAGGAATCAGTGT+TGG | - | chr1_4:9660154-9660173 | Msa0149130:intron | 35.0% | |
! | AAATGAAGCCTTTTTCCACT+AGG | - | chr1_4:9660205-9660224 | Msa0149130:intron | 35.0% |
! | AATGAAGCCTTTTTCCACTA+GGG | - | chr1_4:9660206-9660225 | Msa0149130:intron | 35.0% |
TATGGTAATATTATTCGGGG+GGG | + | chr1_4:9660352-9660371 | None:intergenic | 35.0% | |
ATTGTTCATGTAGAACGGTT+GGG | + | chr1_4:9660395-9660414 | None:intergenic | 35.0% | |
TATTGTTCATGTAGAACGGT+TGG | + | chr1_4:9660396-9660415 | None:intergenic | 35.0% | |
CTTAGTGGTATCAGTTAGAA+AGG | - | chr1_4:9660418-9660437 | Msa0149130:intron | 35.0% | |
! | AAAAGGTTTGTTCATTGCTC+CGG | - | chr1_4:9660660-9660679 | Msa0149130:intron | 35.0% |
! | TTTCCTTTGTTTCACAATGC+AGG | - | chr1_4:9660824-9660843 | Msa0149130:intron | 35.0% |
!! | TCACAATGCAGGTTGTTTTA+TGG | - | chr1_4:9660835-9660854 | Msa0149130:intron | 35.0% |
! | ATCTACAGCTACTTTCAACA+AGG | + | chr1_4:9661153-9661172 | None:intergenic | 35.0% |
!! | TGCACAAACTTTTGATTGCT+AGG | - | chr1_4:9661258-9661277 | Msa0149130:CDS | 35.0% |
TCACTTCATTCACAGTTGTA+TGG | - | chr1_4:9661651-9661670 | Msa0149130:intron | 35.0% | |
GTATAGTTCCATGTAGGTTA+AGG | - | chr1_4:9662108-9662127 | Msa0149130:intron | 35.0% | |
ATGAGTAACCTTAACCTACA+TGG | + | chr1_4:9662119-9662138 | None:intergenic | 35.0% | |
GTAGGTTAAGGTTACTCATT+TGG | - | chr1_4:9662120-9662139 | Msa0149130:intron | 35.0% | |
! | GTTGCCTGGATATTTTGTAT+TGG | - | chr1_4:9662246-9662265 | Msa0149130:intron | 35.0% |
GTGACCAATACAAAATATCC+AGG | + | chr1_4:9662253-9662272 | None:intergenic | 35.0% | |
AGGCAATACATTCTGTTTGT+TGG | - | chr1_4:9662371-9662390 | Msa0149130:CDS | 35.0% | |
GGCAATACATTCTGTTTGTT+GGG | - | chr1_4:9662372-9662391 | Msa0149130:CDS | 35.0% | |
TATTCTTCACTGTTGGTCAT+TGG | - | chr1_4:9662535-9662554 | Msa0149130:intron | 35.0% | |
ACTGCAGATCATAGTAGAAA+TGG | + | chr1_4:9662849-9662868 | None:intergenic | 35.0% | |
CAAACCGTTTACAGTTGAAA+CGG | + | chr1_4:9662947-9662966 | None:intergenic | 35.0% | |
ATTGTACAACAATGGTACAC+CGG | + | chr1_4:9663026-9663045 | None:intergenic | 35.0% | |
CCAAAAACATAAAAGGGGAA+TGG | + | chr1_4:9663096-9663115 | None:intergenic | 35.0% | |
! | CCATTCCCCTTTTATGTTTT+TGG | - | chr1_4:9663093-9663112 | Msa0149130:exon | 35.0% |
GTTACATAGAAAAAAGAGGG+TGG | + | chr1_4:9663138-9663157 | None:intergenic | 35.0% | |
! | ATTTGAGATAAGCGGGAAAA+AGG | + | chr1_4:9663259-9663278 | None:intergenic | 35.0% |
! | TGCTTCAATTTGAGATAAGC+GGG | + | chr1_4:9663266-9663285 | None:intergenic | 35.0% |
ACACAGAGGAGAAAAGAAAG+AGG | + | chr1_4:9653025-9653044 | None:intergenic | 40.0% | |
AGACATGCTGAAAGAAAGAG+AGG | + | chr1_4:9653142-9653161 | None:intergenic | 40.0% | |
TCCATGATTACCTTGTGAAG+AGG | - | chr1_4:9653629-9653648 | Msa0149130:intron | 40.0% | |
CCATGATTACCTTGTGAAGA+GGG | - | chr1_4:9653630-9653649 | Msa0149130:intron | 40.0% | |
CTTTCAAATCCCTCTTCACA+AGG | + | chr1_4:9653642-9653661 | None:intergenic | 40.0% | |
! | AAAGTGTCTTCTGATCCTGT+TGG | - | chr1_4:9653691-9653710 | Msa0149130:intron | 40.0% |
! | ATTTTTGTTCGAGTGGTGGT+CGG | - | chr1_4:9653821-9653840 | Msa0149130:CDS | 40.0% |
CTATGCGTTGTTTAGCTGTT+AGG | - | chr1_4:9654154-9654173 | Msa0149130:intron | 40.0% | |
ATGCGTTGTTTAGCTGTTAG+GGG | - | chr1_4:9654156-9654175 | Msa0149130:intron | 40.0% | |
!!! | TGTACCTTTTGTTTTTGCCC+AGG | - | chr1_4:9654680-9654699 | Msa0149130:CDS | 40.0% |
CAAACCAAAAACTTCAAGCG+CGG | + | chr1_4:9654778-9654797 | None:intergenic | 40.0% | |
AGACTCAGTTAATTAAGGCC+AGG | - | chr1_4:9654813-9654832 | Msa0149130:intron | 40.0% | |
GACTCAGTTAATTAAGGCCA+GGG | - | chr1_4:9654814-9654833 | Msa0149130:intron | 40.0% | |
CTATAGCATTTGCAGTGCTA+GGG | + | chr1_4:9655111-9655130 | None:intergenic | 40.0% | |
GGTTAAAACTTCCCCTTCAA+AGG | - | chr1_4:9655152-9655171 | Msa0149130:intron | 40.0% | |
! | TCCAAAGAATCCCTTTGAAG+GGG | + | chr1_4:9655166-9655185 | None:intergenic | 40.0% |
CTTCCAAAGAATCCCTTTGA+AGG | + | chr1_4:9655168-9655187 | None:intergenic | 40.0% | |
TTTGGAAGATGCTGCAATGA+AGG | - | chr1_4:9655180-9655199 | Msa0149130:intron | 40.0% | |
! | GTCTCCAAATCTTTGCTGTA+CGG | + | chr1_4:9655287-9655306 | None:intergenic | 40.0% |
AAGATTTGGAGACCAACTCT+TGG | - | chr1_4:9655294-9655313 | Msa0149130:CDS | 40.0% | |
! | CATGATTTGGATCCAAGAGT+TGG | + | chr1_4:9655309-9655328 | None:intergenic | 40.0% |
GATTTATGCCCCAAAACAGA+AGG | - | chr1_4:9655432-9655451 | Msa0149130:intron | 40.0% | |
! | CGCTATACTACCTTCTGTTT+TGG | + | chr1_4:9655445-9655464 | None:intergenic | 40.0% |
GTGATCACGAAAATAGTGGT+CGG | + | chr1_4:9655580-9655599 | None:intergenic | 40.0% | |
AGTCAGATAGTTCTCTTTGG+AGG | - | chr1_4:9655674-9655693 | Msa0149130:CDS | 40.0% | |
GTCAGATAGTTCTCTTTGGA+GGG | - | chr1_4:9655675-9655694 | Msa0149130:CDS | 40.0% | |
! | TCAGATAGTTCTCTTTGGAG+GGG | - | chr1_4:9655676-9655695 | Msa0149130:CDS | 40.0% |
! | TTGAACAGGCATTGTAGTTG+TGG | + | chr1_4:9655868-9655887 | None:intergenic | 40.0% |
! | GATTTCAGGCAAGTTTTGCA+TGG | - | chr1_4:9655959-9655978 | Msa0149130:intron | 40.0% |
AGTCAGGAAAACCAGCAAAT+AGG | + | chr1_4:9656092-9656111 | None:intergenic | 40.0% | |
ATTGCCATCAATGATCCTTC+GGG | + | chr1_4:9656179-9656198 | None:intergenic | 40.0% | |
CAAAATATCCCCACGCAATA+AGG | + | chr1_4:9656315-9656334 | None:intergenic | 40.0% | |
! | CTTATTGCGTGGGGATATTT+TGG | - | chr1_4:9656313-9656332 | Msa0149130:intron | 40.0% |
GGCAACAATTTGACTCTGAA+AGG | - | chr1_4:9656432-9656451 | Msa0149130:intron | 40.0% | |
! | ACAATTTGACTCTGAAAGGG+TGG | - | chr1_4:9656436-9656455 | Msa0149130:intron | 40.0% |
AAAGGTTTACTCACTGTGAG+TGG | + | chr1_4:9656462-9656481 | None:intergenic | 40.0% | |
TCTTCAAAGTGATTGTGTGC+TGG | - | chr1_4:9656565-9656584 | Msa0149130:intron | 40.0% | |
GTACATAGGAAGGGAATCTA+TGG | - | chr1_4:9656638-9656657 | Msa0149130:intron | 40.0% | |
! | ACTTGATAATAGCCAAGGGA+AGG | + | chr1_4:9656682-9656701 | None:intergenic | 40.0% |
TTCCCTTGGCTATTATCAAG+TGG | - | chr1_4:9656681-9656700 | Msa0149130:intron | 40.0% | |
! | CATCCACTTGATAATAGCCA+AGG | + | chr1_4:9656687-9656706 | None:intergenic | 40.0% |
CCACCATTTCAATCAGACAA+GGG | + | chr1_4:9656753-9656772 | None:intergenic | 40.0% | |
CGTTACTACACTTGTAAGTG+AGG | - | chr1_4:9656848-9656867 | Msa0149130:intron | 40.0% | |
!! | CAAAATTGGCTTGTAAGGTG+AGG | - | chr1_4:9657021-9657040 | Msa0149130:intron | 40.0% |
!! | AAATTGGCTTGTAAGGTGAG+GGG | - | chr1_4:9657023-9657042 | Msa0149130:intron | 40.0% |
!! | GGCCTTATTTACTCTCAATG+TGG | - | chr1_4:9657074-9657093 | Msa0149130:intron | 40.0% |
TTTACTCTCAATGTGGGACT+TGG | - | chr1_4:9657081-9657100 | Msa0149130:intron | 40.0% | |
TTACTCTCAATGTGGGACTT+GGG | - | chr1_4:9657082-9657101 | Msa0149130:intron | 40.0% | |
TATGTTAGCTCAGCAAAACC+TGG | - | chr1_4:9657303-9657322 | Msa0149130:intron | 40.0% | |
GAGTCTTCTACTATCATCAC+TGG | + | chr1_4:9657341-9657360 | None:intergenic | 40.0% | |
AATACTCGAAATATGGGCGT+AGG | - | chr1_4:9657373-9657392 | Msa0149130:intron | 40.0% | |
CATCACCAACAGGATTTGAA+AGG | + | chr1_4:9657408-9657427 | None:intergenic | 40.0% | |
CAAGATAATAAAGTAGGGGG+AGG | - | chr1_4:9657755-9657774 | Msa0149130:intron | 40.0% | |
AGCATGTCAAACTCCTTTAG+AGG | - | chr1_4:9657803-9657822 | Msa0149130:CDS | 40.0% | |
! | CTCCTTTAGAGGAAATGATC+AGG | - | chr1_4:9657814-9657833 | Msa0149130:CDS | 40.0% |
GACCTGATCATTTCCTCTAA+AGG | + | chr1_4:9657819-9657838 | None:intergenic | 40.0% | |
GCAATTGAGCCATGATTTCT+CGG | - | chr1_4:9657871-9657890 | Msa0149130:CDS | 40.0% | |
TACCTCACCTTCAAACCAAT+TGG | - | chr1_4:9658243-9658262 | Msa0149130:intron | 40.0% | |
TTATCATCCCACTGCCAAAA+CGG | + | chr1_4:9658342-9658361 | None:intergenic | 40.0% | |
TATTGAATTGCAGGCAGATG+TGG | - | chr1_4:9658365-9658384 | Msa0149130:intron | 40.0% | |
CTTATTGGTCCTTCATCTTG+AGG | - | chr1_4:9658723-9658742 | Msa0149130:intron | 40.0% | |
AAAAGCTAGTTATCAAGGGG+GGG | - | chr1_4:9658920-9658939 | Msa0149130:CDS | 40.0% | |
GTCAAGTAGTATGGGATACT+CGG | + | chr1_4:9658982-9659001 | None:intergenic | 40.0% | |
TATCCCATACTACTTGACGT+GGG | - | chr1_4:9658984-9659003 | Msa0149130:CDS | 40.0% | |
TTGGTATCAGATCTGGTTGT+CGG | + | chr1_4:9659102-9659121 | None:intergenic | 40.0% | |
ACAGTAGGCAAGTAATACTC+GGG | - | chr1_4:9659421-9659440 | Msa0149130:intron | 40.0% | |
GCTACTTGAAGACTTAGAGT+AGG | - | chr1_4:9659507-9659526 | Msa0149130:intron | 40.0% | |
ACAATAATTATTGAGGGGGG+AGG | - | chr1_4:9659653-9659672 | Msa0149130:intron | 40.0% | |
ACATCCCATACTAATCGATG+TGG | - | chr1_4:9659703-9659722 | Msa0149130:intron | 40.0% | |
CATCCCATACTAATCGATGT+GGG | - | chr1_4:9659704-9659723 | Msa0149130:intron | 40.0% | |
ATAGGGACTTGGGTATTATG+GGG | + | chr1_4:9659740-9659759 | None:intergenic | 40.0% | |
GATAGGGACTTGGGTATTAT+GGG | + | chr1_4:9659741-9659760 | None:intergenic | 40.0% | |
TGATAGGGACTTGGGTATTA+TGG | + | chr1_4:9659742-9659761 | None:intergenic | 40.0% | |
TAGTTCTCTAGCTGGTGATA+GGG | + | chr1_4:9659757-9659776 | None:intergenic | 40.0% | |
ATAGTTCTCTAGCTGGTGAT+AGG | + | chr1_4:9659758-9659777 | None:intergenic | 40.0% | |
GGTTATCATAGTTCTCTAGC+TGG | + | chr1_4:9659765-9659784 | None:intergenic | 40.0% | |
CAATAGCATCTTCTCCTGTT+TGG | - | chr1_4:9659857-9659876 | Msa0149130:intron | 40.0% | |
!!! | GTTGCGTTTTTGCCTTGTTT+TGG | - | chr1_4:9659879-9659898 | Msa0149130:intron | 40.0% |
!!! | TTTGGTGATGTTTTCCTGGT+TGG | - | chr1_4:9659897-9659916 | Msa0149130:intron | 40.0% |
GCTTTGTCTCATTTCTTCGA+TGG | - | chr1_4:9659924-9659943 | Msa0149130:intron | 40.0% | |
!! | TGCGTCTGTTTTACTAGCTT+TGG | - | chr1_4:9659963-9659982 | Msa0149130:intron | 40.0% |
!!! | TCTGTTTTACTAGCTTTGGC+TGG | - | chr1_4:9659967-9659986 | Msa0149130:intron | 40.0% |
!!! | CTGTTTTACTAGCTTTGGCT+GGG | - | chr1_4:9659968-9659987 | Msa0149130:intron | 40.0% |
AGCTCAAGCTTGAAGAAGAA+TGG | - | chr1_4:9660018-9660037 | Msa0149130:intron | 40.0% | |
! | ATGAAGCCTTTTTCCACTAG+GGG | - | chr1_4:9660207-9660226 | Msa0149130:intron | 40.0% |
ACAAAAGTTGAGGGGTTCAT+TGG | + | chr1_4:9660303-9660322 | None:intergenic | 40.0% | |
! | AACCCCTCAACTTTTGTTGA+GGG | - | chr1_4:9660306-9660325 | Msa0149130:intron | 40.0% |
TTCCCTCAACAAAAGTTGAG+GGG | + | chr1_4:9660311-9660330 | None:intergenic | 40.0% | |
GTTCCCTCAACAAAAGTTGA+GGG | + | chr1_4:9660312-9660331 | None:intergenic | 40.0% | |
! | ATTTTCCGTCGGATGAGAAA+TGG | + | chr1_4:9660616-9660635 | None:intergenic | 40.0% |
AAGTGGTGGTCATGACAAAA+AGG | - | chr1_4:9660643-9660662 | Msa0149130:intron | 40.0% | |
CAACCTGCATTGTGAAACAA+AGG | + | chr1_4:9660830-9660849 | None:intergenic | 40.0% | |
TATGAAGATGTTGCAAGACG+AGG | + | chr1_4:9660942-9660961 | None:intergenic | 40.0% | |
CTTCATACGACAAAACTGTC+CGG | - | chr1_4:9660955-9660974 | Msa0149130:intron | 40.0% | |
TTCATACGACAAAACTGTCC+GGG | - | chr1_4:9660956-9660975 | Msa0149130:intron | 40.0% | |
GCGGGAAAAGACTATAATTG+TGG | + | chr1_4:9661093-9661112 | None:intergenic | 40.0% | |
GTGCATAGATCAAACGATCT+AGG | + | chr1_4:9661243-9661262 | None:intergenic | 40.0% | |
! | TCACAGGCATAGTTGATGTT+CGG | - | chr1_4:9661328-9661347 | Msa0149130:CDS | 40.0% |
TTGTAATTACCAATGCAGCC+TGG | - | chr1_4:9661458-9661477 | Msa0149130:intron | 40.0% | |
TGTAATTACCAATGCAGCCT+GGG | - | chr1_4:9661459-9661478 | Msa0149130:intron | 40.0% | |
CACAATCACAAGAGCAGATA+AGG | + | chr1_4:9661556-9661575 | None:intergenic | 40.0% | |
ATCTGCTCTTGTGATTGTGA+TGG | - | chr1_4:9661557-9661576 | Msa0149130:intron | 40.0% | |
! | GTGATGGCGAGATAAGATAT+TGG | - | chr1_4:9661573-9661592 | Msa0149130:intron | 40.0% |
GGTTTAGTAGTTGCGTATTG+AGG | - | chr1_4:9661672-9661691 | Msa0149130:intron | 40.0% | |
CACAGATGAGATTTCAACCT+CGG | - | chr1_4:9661751-9661770 | Msa0149130:intron | 40.0% | |
AGCATGCCGATATTCTCTAA+AGG | - | chr1_4:9661836-9661855 | Msa0149130:intron | 40.0% | |
! | TGCCGATATTCTCTAAAGGT+TGG | - | chr1_4:9661840-9661859 | Msa0149130:intron | 40.0% |
ACACTATCCAGATGTTACAC+CGG | - | chr1_4:9662016-9662035 | Msa0149130:intron | 40.0% | |
AATTACACCGGTGTAACATC+TGG | + | chr1_4:9662026-9662045 | None:intergenic | 40.0% | |
GTTCATGAGCTTAGCTGTAA+TGG | - | chr1_4:9662478-9662497 | Msa0149130:intron | 40.0% | |
ACAGTGAAGAATACGTTGGA+TGG | + | chr1_4:9662528-9662547 | None:intergenic | 40.0% | |
TCCAACGTATTCTTCACTGT+TGG | - | chr1_4:9662528-9662547 | Msa0149130:intron | 40.0% | |
ACCAACAGTGAAGAATACGT+TGG | + | chr1_4:9662532-9662551 | None:intergenic | 40.0% | |
AAAGGAAATGTAGACTTGCC+TGG | + | chr1_4:9662567-9662586 | None:intergenic | 40.0% | |
CTACTATGATCTGCAGTCAT+TGG | - | chr1_4:9662852-9662871 | Msa0149130:intron | 40.0% | |
CGTTTCAACTGTAAACGGTT+TGG | - | chr1_4:9662945-9662964 | Msa0149130:intron | 40.0% | |
CATAGAAAAAAGAGGGTGGT+TGG | + | chr1_4:9663134-9663153 | None:intergenic | 40.0% | |
GGACAGAAACATGAACACAG+AGG | + | chr1_4:9653039-9653058 | None:intergenic | 45.0% | |
TCAGCATGTCTCAGACTAAC+TGG | - | chr1_4:9653151-9653170 | Msa0149130:three_prime_UTR | 45.0% | |
CAGCATGTCTCAGACTAACT+GGG | - | chr1_4:9653152-9653171 | Msa0149130:three_prime_UTR | 45.0% | |
CCCTCTTCACAAGGTAATCA+TGG | + | chr1_4:9653633-9653652 | None:intergenic | 45.0% | |
GGATTTGAAAGCTTCTGCTC+AGG | - | chr1_4:9653651-9653670 | Msa0149130:intron | 45.0% | |
!! | CTCAGGCTTTTCAAGCTGAA+GGG | - | chr1_4:9653668-9653687 | Msa0149130:intron | 45.0% |
CACTCGAACAAAAATCCTCC+CGG | + | chr1_4:9653816-9653835 | None:intergenic | 45.0% | |
! | GAGGATTTTTGTTCGAGTGG+TGG | - | chr1_4:9653817-9653836 | Msa0149130:CDS | 45.0% |
! | TCTGGGACATATTCATTGCC+AGG | - | chr1_4:9653847-9653866 | Msa0149130:CDS | 45.0% |
ACCAACCTCGATATAAGACG+CGG | + | chr1_4:9653898-9653917 | None:intergenic | 45.0% | |
GTTTAGCTGTTAGGGGAAGT+TGG | - | chr1_4:9654163-9654182 | Msa0149130:intron | 45.0% | |
GTTTGACACCAAAGCTAGCA+TGG | + | chr1_4:9654606-9654625 | None:intergenic | 45.0% | |
! | TTTGCCGCGCTTGAAGTTTT+TGG | - | chr1_4:9654771-9654790 | Msa0149130:intron | 45.0% |
TGTTGATGTGGTGATTGCTG+AGG | + | chr1_4:9654872-9654891 | None:intergenic | 45.0% | |
TGCAACAGATGCTGTTACAG+AGG | - | chr1_4:9654924-9654943 | Msa0149130:intron | 45.0% | |
TGTTGTTGCTGCTGATGTTG+CGG | + | chr1_4:9655004-9655023 | None:intergenic | 45.0% | |
CAACAGCAACAGCAACAACA+GGG | - | chr1_4:9655031-9655050 | Msa0149130:intron | 45.0% | |
GATAGGGCTCATCTCTTGAA+TGG | - | chr1_4:9655058-9655077 | Msa0149130:intron | 45.0% | |
!! | TTGAATGGTGGTGGTGCAAA+TGG | - | chr1_4:9655073-9655092 | Msa0149130:intron | 45.0% |
!! | GGTGGTGCAAATGGATTAGT+TGG | - | chr1_4:9655082-9655101 | Msa0149130:intron | 45.0% |
GCTATAGCATTTGCAGTGCT+AGG | + | chr1_4:9655112-9655131 | None:intergenic | 45.0% | |
TCCCCTTCAAAGGGATTCTT+TGG | - | chr1_4:9655162-9655181 | Msa0149130:intron | 45.0% | |
! | AGATGCTGCAATGAAGGTAC+AGG | - | chr1_4:9655186-9655205 | Msa0149130:intron | 45.0% |
! | GATGCTGCAATGAAGGTACA+GGG | - | chr1_4:9655187-9655206 | Msa0149130:intron | 45.0% |
! | ATGCTGCAATGAAGGTACAG+GGG | - | chr1_4:9655188-9655207 | Msa0149130:intron | 45.0% |
AAGAAAATTACCCTGACGGC+TGG | + | chr1_4:9655363-9655382 | None:intergenic | 45.0% | |
! | ATAGTTCTCTTTGGAGGGGA+GGG | - | chr1_4:9655680-9655699 | Msa0149130:CDS | 45.0% |
!! | CTTTAAGGTCATGGAAGGAG+CGG | + | chr1_4:9655742-9655761 | None:intergenic | 45.0% |
TGACTACGAGCTTGAACTTG+TGG | + | chr1_4:9656004-9656023 | None:intergenic | 45.0% | |
TGTATTGAATCCCAGAGCTG+CGG | - | chr1_4:9656151-9656170 | Msa0149130:intron | 45.0% | |
! | GGATCATTGATGGCAATTCC+TGG | - | chr1_4:9656182-9656201 | Msa0149130:intron | 45.0% |
GTTCCAGGATCAAATCAAGG+TGG | - | chr1_4:9656411-9656430 | Msa0149130:intron | 45.0% | |
! | TTGCCACCTTGATTTGATCC+TGG | + | chr1_4:9656417-9656436 | None:intergenic | 45.0% |
! | GATTGTGTGCTGGAGTCTTT+TGG | - | chr1_4:9656575-9656594 | Msa0149130:intron | 45.0% |
TCCTAACTGTTTCCTTCCCT+TGG | - | chr1_4:9656667-9656686 | Msa0149130:intron | 45.0% | |
TCAATCAGACAAGGGAGGTT+TGG | + | chr1_4:9656745-9656764 | None:intergenic | 45.0% | |
CCATTTCAATCAGACAAGGG+AGG | + | chr1_4:9656750-9656769 | None:intergenic | 45.0% | |
CCTCCCTTGTCTGATTGAAA+TGG | - | chr1_4:9656747-9656766 | Msa0149130:intron | 45.0% | |
CCCTTGTCTGATTGAAATGG+TGG | - | chr1_4:9656750-9656769 | Msa0149130:intron | 45.0% | |
GCCACCATTTCAATCAGACA+AGG | + | chr1_4:9656754-9656773 | None:intergenic | 45.0% | |
TTCAATAGCACTAGGCGTGA+TGG | + | chr1_4:9656921-9656940 | None:intergenic | 45.0% | |
! | ACGCCTAGTGCTATTGAACT+TGG | - | chr1_4:9656923-9656942 | Msa0149130:intron | 45.0% |
GCACCAAGTTCAATAGCACT+AGG | + | chr1_4:9656929-9656948 | None:intergenic | 45.0% | |
GGTTTGGATCAACTTCGTTC+TGG | - | chr1_4:9657193-9657212 | Msa0149130:intron | 45.0% | |
GGCTGTGGACTTTGTATGAA+AGG | + | chr1_4:9657238-9657257 | None:intergenic | 45.0% | |
!! | GGAAGTTGATGAAAAGGCTG+TGG | + | chr1_4:9657253-9657272 | None:intergenic | 45.0% |
CTACTATCATCACTGGCAGA+AGG | + | chr1_4:9657334-9657353 | None:intergenic | 45.0% | |
TCGAAATATGGGCGTAGGTA+AGG | - | chr1_4:9657378-9657397 | Msa0149130:intron | 45.0% | |
AATATGGGCGTAGGTAAGGA+TGG | - | chr1_4:9657382-9657401 | Msa0149130:intron | 45.0% | |
GATGGCCTTTCAAATCCTGT+TGG | - | chr1_4:9657400-9657419 | Msa0149130:intron | 45.0% | |
AAGTTGCTGCTGTTGTGGAT+TGG | + | chr1_4:9657675-9657694 | None:intergenic | 45.0% | |
TGTTGAAGTTGCTGCTGTTG+TGG | + | chr1_4:9657680-9657699 | None:intergenic | 45.0% | |
GATAATAAAGTAGGGGGAGG+TGG | - | chr1_4:9657758-9657777 | Msa0149130:intron | 45.0% | |
GTTTGACATGCTACCATCTC+CGG | + | chr1_4:9657795-9657814 | None:intergenic | 45.0% | |
AAGCAGCCTGTATCTTCTTC+TGG | - | chr1_4:9658043-9658062 | Msa0149130:CDS | 45.0% | |
!! | GGCATTGATATCACATCACC+AGG | + | chr1_4:9658154-9658173 | None:intergenic | 45.0% |
!! | ATGTTTAGCACTGATGGCAC+CGG | - | chr1_4:9658214-9658233 | Msa0149130:CDS | 45.0% |
TGAAGGTGAGGTAAGAGTTC+CGG | + | chr1_4:9658236-9658255 | None:intergenic | 45.0% | |
!! | CACCAATTGGTTTGAAGGTG+AGG | + | chr1_4:9658248-9658267 | None:intergenic | 45.0% |
TGGCAATGAGTCTACATGCA+AGG | + | chr1_4:9658317-9658336 | None:intergenic | 45.0% | |
! | GACTCATTGCCATTCCGTTT+TGG | - | chr1_4:9658325-9658344 | Msa0149130:intron | 45.0% |
!! | GTTTTGGCAGTGGGATGATA+AGG | - | chr1_4:9658341-9658360 | Msa0149130:intron | 45.0% |
TACGTCCAACTGGATCTCTA+GGG | + | chr1_4:9658458-9658477 | None:intergenic | 45.0% | |
ATACGTCCAACTGGATCTCT+AGG | + | chr1_4:9658459-9658478 | None:intergenic | 45.0% | |
TAGAGATCCAGTTGGACGTA+TGG | - | chr1_4:9658458-9658477 | Msa0149130:CDS | 45.0% | |
CTTACATCCATACGTCCAAC+TGG | + | chr1_4:9658468-9658487 | None:intergenic | 45.0% | |
GGACGTATGGATGTAAGCAA+AGG | - | chr1_4:9658471-9658490 | Msa0149130:CDS | 45.0% | |
! | TACTCGGTGGAGCATTTAAG+TGG | + | chr1_4:9658966-9658985 | None:intergenic | 45.0% |
AAGTAGTATGGGATACTCGG+TGG | + | chr1_4:9658979-9658998 | None:intergenic | 45.0% | |
GTATCCCATACTACTTGACG+TGG | - | chr1_4:9658983-9659002 | Msa0149130:CDS | 45.0% | |
AGTCCCACGTCAAGTAGTAT+GGG | + | chr1_4:9658990-9659009 | None:intergenic | 45.0% | |
AAGTCCCACGTCAAGTAGTA+TGG | + | chr1_4:9658991-9659010 | None:intergenic | 45.0% | |
AAGCATGGGTACGACAGAAA+TGG | - | chr1_4:9659142-9659161 | Msa0149130:intron | 45.0% | |
!! | AAATGGAGGAGTACCCATAC+TGG | - | chr1_4:9659159-9659178 | Msa0149130:intron | 45.0% |
TACCAGAGATGATCAAGTGC+GGG | + | chr1_4:9659243-9659262 | None:intergenic | 45.0% | |
GTACCAGAGATGATCAAGTG+CGG | + | chr1_4:9659244-9659263 | None:intergenic | 45.0% | |
GCACTTGATCATCTCTGGTA+CGG | - | chr1_4:9659243-9659262 | Msa0149130:intron | 45.0% | |
CGTGATAAAAGATGCAGCGA+CGG | - | chr1_4:9659326-9659345 | Msa0149130:intron | 45.0% | |
! | AGTGATGAAGATTTGGTCCC+TGG | - | chr1_4:9659370-9659389 | Msa0149130:intron | 45.0% |
CAGTAGGCAAGTAATACTCG+GGG | - | chr1_4:9659422-9659441 | Msa0149130:intron | 45.0% | |
!! | TAATATTGGGATTGGCTCGC+TGG | - | chr1_4:9659450-9659469 | Msa0149130:intron | 45.0% |
GGTGGAATATTTAAGGGCCT+TGG | + | chr1_4:9659681-9659700 | None:intergenic | 45.0% | |
GATTAGTATGGGATGTTCGG+TGG | + | chr1_4:9659699-9659718 | None:intergenic | 45.0% | |
AGGCAAAAACGCAACCAAAC+AGG | + | chr1_4:9659874-9659893 | None:intergenic | 45.0% | |
CTGATTGTTCGCTAGCAATC+AGG | - | chr1_4:9660096-9660115 | Msa0149130:CDS | 45.0% | |
!! | GGAATCAGTGTTGGCGTAAA+AGG | - | chr1_4:9660163-9660182 | Msa0149130:intron | 45.0% |
! | TGAAGCCTTTTTCCACTAGG+GGG | - | chr1_4:9660208-9660227 | Msa0149130:intron | 45.0% |
! | AGGGGGATTGGCAACATAAA+AGG | - | chr1_4:9660225-9660244 | Msa0149130:CDS | 45.0% |
TCTAAGGAGCAAAGCTAAGC+TGG | - | chr1_4:9660277-9660296 | Msa0149130:CDS | 45.0% | |
! | GAACCCCTCAACTTTTGTTG+AGG | - | chr1_4:9660305-9660324 | Msa0149130:intron | 45.0% |
GGTTCCCTCAACAAAAGTTG+AGG | + | chr1_4:9660313-9660332 | None:intergenic | 45.0% | |
TAATATTATTCGGGGGGGCA+AGG | + | chr1_4:9660347-9660366 | None:intergenic | 45.0% | |
TGTAGCCATTTCTCATCCGA+CGG | - | chr1_4:9660608-9660627 | Msa0149130:intron | 45.0% | |
! | ACTTGCCAGCAATTTTCCGT+CGG | + | chr1_4:9660627-9660646 | None:intergenic | 45.0% |
CATTGTCAACATCCCAAACC+CGG | + | chr1_4:9660977-9660996 | None:intergenic | 45.0% | |
!!! | CTTTTCCCGCCTTTGAAATG+TGG | - | chr1_4:9661103-9661122 | Msa0149130:CDS | 45.0% |
ATGAGCCACATTTCAAAGGC+GGG | + | chr1_4:9661111-9661130 | None:intergenic | 45.0% | |
GATGAGCCACATTTCAAAGG+CGG | + | chr1_4:9661112-9661131 | None:intergenic | 45.0% | |
GCAGATGAGCCACATTTCAA+AGG | + | chr1_4:9661115-9661134 | None:intergenic | 45.0% | |
TATTCGCTTCGTACCTTCAC+TGG | - | chr1_4:9661482-9661501 | Msa0149130:intron | 45.0% | |
ATTCGCTTCGTACCTTCACT+GGG | - | chr1_4:9661483-9661502 | Msa0149130:intron | 45.0% | |
! | CAGTTGTGCTAGAGTGTCAA+AGG | - | chr1_4:9661610-9661629 | Msa0149130:intron | 45.0% |
TTTCACCAATTAGGGTGGCA+TGG | - | chr1_4:9661728-9661747 | Msa0149130:intron | 45.0% | |
ATGAGATTTCAACCTCGGCT+AGG | - | chr1_4:9661756-9661775 | Msa0149130:intron | 45.0% | |
TGAGATTTCAACCTCGGCTA+GGG | - | chr1_4:9661757-9661776 | Msa0149130:intron | 45.0% | |
AGACCTGAGTCAAATGAGCA+TGG | + | chr1_4:9662146-9662165 | None:intergenic | 45.0% | |
ATCCAGGCAACAGAGTTGTT+CGG | + | chr1_4:9662237-9662256 | None:intergenic | 45.0% | |
TGTGTGACCCTGCAATTCAT+AGG | + | chr1_4:9662350-9662369 | None:intergenic | 45.0% | |
TGAATTGCAGGGTCACACAA+AGG | - | chr1_4:9662351-9662370 | Msa0149130:intron | 45.0% | |
! | TCTGTTTGTTGGGATCCTTC+TGG | - | chr1_4:9662382-9662401 | Msa0149130:CDS | 45.0% |
! | CAGAGTCATCGTCTTGTTCT+CGG | + | chr1_4:9662893-9662912 | None:intergenic | 45.0% |
CTGGCCGTTTCAACTGTAAA+CGG | - | chr1_4:9662940-9662959 | Msa0149130:intron | 45.0% | |
CTTGACAAACCTGTCATGAC+TGG | + | chr1_4:9662980-9662999 | None:intergenic | 45.0% | |
ATGACAGGTTTGTCAAGCTC+TGG | - | chr1_4:9662983-9663002 | Msa0149130:intron | 45.0% | |
AGAAAAAAGAGGGTGGTTGG+TGG | + | chr1_4:9663131-9663150 | None:intergenic | 45.0% | |
CATGTCTCAGACTAACTGGG+AGG | - | chr1_4:9653155-9653174 | Msa0149130:three_prime_UTR | 50.0% | |
!! | GCTCAGGCTTTTCAAGCTGA+AGG | - | chr1_4:9653667-9653686 | Msa0149130:intron | 50.0% |
GATTGCAGCTATTGACGCTC+CGG | - | chr1_4:9653794-9653813 | Msa0149130:CDS | 50.0% | |
ATTGCAGCTATTGACGCTCC+GGG | - | chr1_4:9653795-9653814 | Msa0149130:CDS | 50.0% | |
! | CGGGAGGATTTTTGTTCGAG+TGG | - | chr1_4:9653814-9653833 | Msa0149130:CDS | 50.0% |
!! | CAGGACGAACGAGAAGCATT+CGG | - | chr1_4:9653866-9653885 | Msa0149130:CDS | 50.0% |
AGTTGCCGCGTCTTATATCG+AGG | - | chr1_4:9653890-9653909 | Msa0149130:intron | 50.0% | |
! | AAGCCACTCCATGCTAGCTT+TGG | - | chr1_4:9654595-9654614 | Msa0149130:intron | 50.0% |
ACACCAAAGCTAGCATGGAG+TGG | + | chr1_4:9654601-9654620 | None:intergenic | 50.0% | |
TGTGGTGATTGCTGAGGTTG+TGG | + | chr1_4:9654866-9654885 | None:intergenic | 50.0% | |
GCAACAGCAACAGCAACAAC+AGG | - | chr1_4:9655030-9655049 | Msa0149130:intron | 50.0% | |
AGCAACAGCAACAACAGGGT+AGG | - | chr1_4:9655035-9655054 | Msa0149130:intron | 50.0% | |
GCAACAGCAACAACAGGGTA+GGG | - | chr1_4:9655036-9655055 | Msa0149130:intron | 50.0% | |
AGCAACAACAGGGTAGGGAT+AGG | - | chr1_4:9655041-9655060 | Msa0149130:intron | 50.0% | |
GCAACAACAGGGTAGGGATA+GGG | - | chr1_4:9655042-9655061 | Msa0149130:intron | 50.0% | |
AGGGCTCATCTCTTGAATGG+TGG | - | chr1_4:9655061-9655080 | Msa0149130:intron | 50.0% | |
GCTCATCTCTTGAATGGTGG+TGG | - | chr1_4:9655064-9655083 | Msa0149130:intron | 50.0% | |
!! | ATGAAGGTACAGGGGTGTTC+CGG | - | chr1_4:9655196-9655215 | Msa0149130:intron | 50.0% |
CTGAAGTCTTCTGCAGCTAC+TGG | - | chr1_4:9655337-9655356 | Msa0149130:CDS | 50.0% | |
CAGAAGGTAGTATAGCGCTG+CGG | - | chr1_4:9655448-9655467 | Msa0149130:intron | 50.0% | |
! | GATAGTTCTCTTTGGAGGGG+AGG | - | chr1_4:9655679-9655698 | Msa0149130:CDS | 50.0% |
GAGGGCGAGTGCTTAATGTT+CGG | - | chr1_4:9655698-9655717 | Msa0149130:intron | 50.0% | |
! | GTTGTGGTGTCAGCATAGCT+GGG | + | chr1_4:9655852-9655871 | None:intergenic | 50.0% |
! | AGTTGTGGTGTCAGCATAGC+TGG | + | chr1_4:9655853-9655872 | None:intergenic | 50.0% |
!!! | CAAGTTTTGCATGGTGCTGC+TGG | - | chr1_4:9655968-9655987 | Msa0149130:intron | 50.0% |
CTCGTAGTCAGCAACTACCA+GGG | - | chr1_4:9656014-9656033 | Msa0149130:intron | 50.0% | |
!! | GGTTTTCCTGACTTGCCACT+TGG | - | chr1_4:9656099-9656118 | Msa0149130:intron | 50.0% |
CTGATTCCAAGTGGCAAGTC+AGG | + | chr1_4:9656108-9656127 | None:intergenic | 50.0% | |
! | CTGACTTGCCACTTGGAATC+AGG | - | chr1_4:9656106-9656125 | Msa0149130:intron | 50.0% |
!! | GCAGCTCTGGGATTCAATAC+AGG | + | chr1_4:9656152-9656171 | None:intergenic | 50.0% |
GTATTGAATCCCAGAGCTGC+GGG | - | chr1_4:9656152-9656171 | Msa0149130:intron | 50.0% | |
!!! | GGAGTCTTTTGGAGCGAGAT+AGG | - | chr1_4:9656586-9656605 | Msa0149130:intron | 50.0% |
GCCAAGGGAAGGAAACAGTT+AGG | + | chr1_4:9656671-9656690 | None:intergenic | 50.0% | |
! | CAGACAAGGGAGGTTTGGTA+AGG | + | chr1_4:9656740-9656759 | None:intergenic | 50.0% |
TCTGTATCCCCACGAGGAAA+TGG | + | chr1_4:9657472-9657491 | None:intergenic | 50.0% | |
AGCATATCTGTATCCCCACG+AGG | + | chr1_4:9657478-9657497 | None:intergenic | 50.0% | |
AATAAAGTAGGGGGAGGTGG+TGG | - | chr1_4:9657761-9657780 | Msa0149130:intron | 50.0% | |
TCATGGCTCAATTGCACGCA+CGG | + | chr1_4:9657866-9657885 | None:intergenic | 50.0% | |
AAGGTTTCCAAAAGCCAGCC+TGG | - | chr1_4:9658010-9658029 | Msa0149130:CDS | 50.0% | |
!!! | CTTTCTTCCAGGCTGGCTTT+TGG | + | chr1_4:9658020-9658039 | None:intergenic | 50.0% |
GCTTTCTCTTTCTTCCAGGC+TGG | + | chr1_4:9658027-9658046 | None:intergenic | 50.0% | |
! | GGCTGCTTTCTCTTTCTTCC+AGG | + | chr1_4:9658031-9658050 | None:intergenic | 50.0% |
GCAGGACCAGAAGAAGATAC+AGG | + | chr1_4:9658052-9658071 | None:intergenic | 50.0% | |
TCCTGCCAATAGCTCAGGAA+CGG | - | chr1_4:9658066-9658085 | Msa0149130:CDS | 50.0% | |
ATTCGCCGTTCCTGAGCTAT+TGG | + | chr1_4:9658074-9658093 | None:intergenic | 50.0% | |
!! | TTGCCATTCCGTTTTGGCAG+TGG | - | chr1_4:9658331-9658350 | Msa0149130:intron | 50.0% |
!! | TGCCATTCCGTTTTGGCAGT+GGG | - | chr1_4:9658332-9658351 | Msa0149130:intron | 50.0% |
ATCCCACTGCCAAAACGGAA+TGG | + | chr1_4:9658337-9658356 | None:intergenic | 50.0% | |
AGATGTGGACCGCTTTGTAG+AGG | - | chr1_4:9658380-9658399 | Msa0149130:intron | 50.0% | |
GAGATCCGTCCTCTACAAAG+CGG | + | chr1_4:9658392-9658411 | None:intergenic | 50.0% | |
ACAGACCCTAGAGATCCAGT+TGG | - | chr1_4:9658450-9658469 | Msa0149130:CDS | 50.0% | |
GTCCTTCATCTTGAGGCTGA+CGG | - | chr1_4:9658730-9658749 | Msa0149130:intron | 50.0% | |
! | GACGGTGGCATGCTTTTCTT+CGG | - | chr1_4:9658748-9658767 | Msa0149130:intron | 50.0% |
CGTTGTAGAGAGCAGACGTA+TGG | + | chr1_4:9659026-9659045 | None:intergenic | 50.0% | |
GTATCAGATCTGGTTGTCGG+TGG | + | chr1_4:9659099-9659118 | None:intergenic | 50.0% | |
CATGGGTACGACAGAAATGG+AGG | - | chr1_4:9659145-9659164 | Msa0149130:intron | 50.0% | |
TTCCCGCACTTGATCATCTC+TGG | - | chr1_4:9659238-9659257 | Msa0149130:intron | 50.0% | |
TGATCATCTCTGGTACGGCT+CGG | - | chr1_4:9659248-9659267 | Msa0149130:intron | 50.0% | |
! | GATGAAGATTTGGTCCCTGG+CGG | - | chr1_4:9659373-9659392 | Msa0149130:intron | 50.0% |
CTAGCTGGTGATAGGGACTT+GGG | + | chr1_4:9659750-9659769 | None:intergenic | 50.0% | |
TCTAGCTGGTGATAGGGACT+TGG | + | chr1_4:9659751-9659770 | None:intergenic | 50.0% | |
GAGACAAAGCAGATCCAACC+AGG | + | chr1_4:9659914-9659933 | None:intergenic | 50.0% | |
CCAATCCCCCTAGTGGAAAA+AGG | + | chr1_4:9660216-9660235 | None:intergenic | 50.0% | |
! | CCTTTTTCCACTAGGGGGAT+TGG | - | chr1_4:9660213-9660232 | Msa0149130:intron | 50.0% |
TATGTTGCCAATCCCCCTAG+TGG | + | chr1_4:9660223-9660242 | None:intergenic | 50.0% | |
CTCATCCGACGGAAAATTGC+TGG | - | chr1_4:9660619-9660638 | Msa0149130:intron | 50.0% | |
GACGGAAAATTGCTGGCAAG+TGG | - | chr1_4:9660626-9660645 | Msa0149130:intron | 50.0% | |
GGAAAATTGCTGGCAAGTGG+TGG | - | chr1_4:9660629-9660648 | Msa0149130:intron | 50.0% | |
GAGGCATGCTTGGACTGAAA+CGG | + | chr1_4:9660923-9660942 | None:intergenic | 50.0% | |
ACGACAAAACTGTCCGGGTT+TGG | - | chr1_4:9660961-9660980 | Msa0149130:intron | 50.0% | |
CGACAAAACTGTCCGGGTTT+GGG | - | chr1_4:9660962-9660981 | Msa0149130:intron | 50.0% | |
AAGGTACGAAGCGAATACCC+AGG | + | chr1_4:9661479-9661498 | None:intergenic | 50.0% | |
TGGCCATGCTCATTTGACTC+AGG | - | chr1_4:9662140-9662159 | Msa0149130:intron | 50.0% | |
TACCGAACAACTCTGTTGCC+TGG | - | chr1_4:9662232-9662251 | Msa0149130:intron | 50.0% | |
TGTCAGTGAGGACTCTGTCA+GGG | - | chr1_4:9662420-9662439 | Msa0149130:CDS | 50.0% | |
TCTGTCAGGGTTTGGACTCT+TGG | - | chr1_4:9662433-9662452 | Msa0149130:CDS | 50.0% | |
AGGGTTTGGACTCTTGGATC+CGG | - | chr1_4:9662439-9662458 | Msa0149130:CDS | 50.0% | |
AACACATTCCCCTTCACTCC+CGG | + | chr1_4:9662461-9662480 | None:intergenic | 50.0% | |
! | GTTGGTCATTGGCTGTTACC+AGG | - | chr1_4:9662546-9662565 | Msa0149130:intron | 50.0% |
ATCTGCAGTCATTGGAGCTG+TGG | - | chr1_4:9662860-9662879 | Msa0149130:intron | 50.0% | |
ATGACTCTGTCTGCTCACGA+CGG | - | chr1_4:9662904-9662923 | Msa0149130:intron | 50.0% | |
TTGCTTCTGCCAGTCATGAC+AGG | - | chr1_4:9662968-9662987 | Msa0149130:intron | 50.0% | |
!! | TCGAGTGGTGGTCGGTTTTC+TGG | - | chr1_4:9653829-9653848 | Msa0149130:CDS | 55.0% |
!! | CGAGTGGTGGTCGGTTTTCT+GGG | - | chr1_4:9653830-9653849 | Msa0149130:CDS | 55.0% |
CGAATGCTTCTCGTTCGTCC+TGG | + | chr1_4:9653868-9653887 | None:intergenic | 55.0% | |
GCCGCGTCTTATATCGAGGT+TGG | - | chr1_4:9653894-9653913 | Msa0149130:intron | 55.0% | |
TGCTGCTGCTGCTGTTGATG+TGG | + | chr1_4:9654884-9654903 | None:intergenic | 55.0% | |
GCTCGTAGTCAGCAACTACC+AGG | - | chr1_4:9656013-9656032 | Msa0149130:intron | 55.0% | |
GCAACTACCAGGGTCTACTC+CGG | - | chr1_4:9656024-9656043 | Msa0149130:intron | 55.0% | |
TAGTGTACCGGAGTAGACCC+TGG | + | chr1_4:9656034-9656053 | None:intergenic | 55.0% | |
GGGTCCCGAAGGATCATTGA+TGG | - | chr1_4:9656172-9656191 | Msa0149130:intron | 55.0% | |
TGGAGGACCACCTGCTTGAA+GGG | + | chr1_4:9657452-9657471 | None:intergenic | 55.0% | |
ATGGAGGACCACCTGCTTGA+AGG | + | chr1_4:9657453-9657472 | None:intergenic | 55.0% | |
GTGGTCCTCCATTTCCTCGT+GGG | - | chr1_4:9657461-9657480 | Msa0149130:intron | 55.0% | |
TGGTCCTCCATTTCCTCGTG+GGG | - | chr1_4:9657462-9657481 | Msa0149130:intron | 55.0% | |
GTATCCCCACGAGGAAATGG+AGG | + | chr1_4:9657469-9657488 | None:intergenic | 55.0% | |
TCTGGTCCTGCCAATAGCTC+AGG | - | chr1_4:9658061-9658080 | Msa0149130:CDS | 55.0% | |
TCAGGAACGGCGAATACAGC+AGG | - | chr1_4:9658079-9658098 | Msa0149130:CDS | 55.0% | |
!! | GGAGTTGAGGGTGCTGAACT+CGG | + | chr1_4:9658112-9658131 | None:intergenic | 55.0% |
GTTGAGCCTGAGGGAGTTGA+GGG | + | chr1_4:9658124-9658143 | None:intergenic | 55.0% | |
AGTTGAGCCTGAGGGAGTTG+AGG | + | chr1_4:9658125-9658144 | None:intergenic | 55.0% | |
! | GGCGTATGAGTTGAGCCTGA+GGG | + | chr1_4:9658133-9658152 | None:intergenic | 55.0% |
! | AGGCGTATGAGTTGAGCCTG+AGG | + | chr1_4:9658134-9658153 | None:intergenic | 55.0% |
TCAGGCTCAACTCATACGCC+TGG | - | chr1_4:9658133-9658152 | Msa0149130:CDS | 55.0% | |
GTGGACCGCTTTGTAGAGGA+CGG | - | chr1_4:9658384-9658403 | Msa0149130:intron | 55.0% | |
CACCGTCAGCCTCAAGATGA+AGG | + | chr1_4:9658735-9658754 | None:intergenic | 55.0% | |
CTTCATCTTGAGGCTGACGG+TGG | - | chr1_4:9658733-9658752 | Msa0149130:intron | 55.0% | |
AGCTAGTTATCAAGGGGGGG+TGG | - | chr1_4:9658923-9658942 | Msa0149130:CDS | 55.0% | |
GCTAGTTATCAAGGGGGGGT+GGG | - | chr1_4:9658924-9658943 | Msa0149130:CDS | 55.0% | |
GAGAGCAGACGTATGGACGT+CGG | + | chr1_4:9659019-9659038 | None:intergenic | 55.0% | |
GAAAGGGCTGTCTACAGAGG+GGG | + | chr1_4:9659072-9659091 | None:intergenic | 55.0% | |
GGAAAGGGCTGTCTACAGAG+GGG | + | chr1_4:9659073-9659092 | None:intergenic | 55.0% | |
CGGAAAGGGCTGTCTACAGA+GGG | + | chr1_4:9659074-9659093 | None:intergenic | 55.0% | |
TCGGAAAGGGCTGTCTACAG+AGG | + | chr1_4:9659075-9659094 | None:intergenic | 55.0% | |
AGATCTGGTTGTCGGTGGCT+CGG | + | chr1_4:9659094-9659113 | None:intergenic | 55.0% | |
TATTGAGGGGGGAGGAACCA+AGG | - | chr1_4:9659661-9659680 | Msa0149130:intron | 55.0% | |
GTTGCAAGACGAGGCATGCT+TGG | + | chr1_4:9660933-9660952 | None:intergenic | 55.0% | |
AGCGAATACCCAGGCTGCAT+TGG | + | chr1_4:9661470-9661489 | None:intergenic | 55.0% | |
AGCTGCAGAATGCCCAGTGA+AGG | + | chr1_4:9661498-9661517 | None:intergenic | 55.0% | |
CTGTGCCATGCCACCCTAAT+TGG | + | chr1_4:9661736-9661755 | None:intergenic | 55.0% | |
! | GGATCCTTCTGGAGAGTTCC+TGG | - | chr1_4:9662393-9662412 | Msa0149130:CDS | 55.0% |
GATGCCAGGAACTCTCCAGA+AGG | + | chr1_4:9662400-9662419 | None:intergenic | 55.0% | |
GTTCCTGGCATCTGTCAGTG+AGG | - | chr1_4:9662408-9662427 | Msa0149130:CDS | 55.0% | |
AGTCCTCACTGACAGATGCC+AGG | + | chr1_4:9662414-9662433 | None:intergenic | 55.0% | |
CTGTCAGTGAGGACTCTGTC+AGG | - | chr1_4:9662419-9662438 | Msa0149130:CDS | 55.0% | |
GTGAGGACTCTGTCAGGGTT+TGG | - | chr1_4:9662425-9662444 | Msa0149130:CDS | 55.0% | |
GGGTTTGGACTCTTGGATCC+GGG | - | chr1_4:9662440-9662459 | Msa0149130:CDS | 55.0% | |
ACTCTTGGATCCGGGAGTGA+AGG | - | chr1_4:9662448-9662467 | Msa0149130:intron | 55.0% | |
CTCTTGGATCCGGGAGTGAA+GGG | - | chr1_4:9662449-9662468 | Msa0149130:intron | 55.0% | |
TCTTGGATCCGGGAGTGAAG+GGG | - | chr1_4:9662450-9662469 | Msa0149130:intron | 55.0% | |
!! | CGACGGTCTTATTGCTGCAC+TGG | - | chr1_4:9662921-9662940 | Msa0149130:intron | 55.0% |
! | CTCTGGAAGTGACCTTGACC+TGG | - | chr1_4:9663000-9663019 | Msa0149130:intron | 55.0% |
ACAACAATGGTACACCGGCC+AGG | + | chr1_4:9663021-9663040 | None:intergenic | 55.0% | |
GCTGTTGCTGCTGTTGCTGC+TGG | + | chr1_4:9654955-9654974 | None:intergenic | 60.0% | |
CACTGGCAGAAGGTGATGCC+AGG | + | chr1_4:9657324-9657343 | None:intergenic | 60.0% | |
GTTGGATCGCCCCTTCAAGC+AGG | - | chr1_4:9657439-9657458 | Msa0149130:intron | 60.0% | |
GGAGGACCACCTGCTTGAAG+GGG | + | chr1_4:9657451-9657470 | None:intergenic | 60.0% | |
GGTGGTCCTCCATTTCCTCG+TGG | - | chr1_4:9657460-9657479 | Msa0149130:intron | 60.0% | |
GCCGTTCCTGAGCTATTGGC+AGG | + | chr1_4:9658070-9658089 | None:intergenic | 60.0% | |
!! | GAGGGTGCTGAACTCGGAGA+TGG | + | chr1_4:9658106-9658125 | None:intergenic | 60.0% |
TCAGCACCCTCAACTCCCTC+AGG | - | chr1_4:9658115-9658134 | Msa0149130:CDS | 60.0% | |
AGTTATCAAGGGGGGGTGGG+TGG | - | chr1_4:9658927-9658946 | Msa0149130:CDS | 60.0% | |
! | GGTTGTCGGTGGCTCGGAAA+GGG | + | chr1_4:9659088-9659107 | None:intergenic | 60.0% |
! | TGGTTGTCGGTGGCTCGGAA+AGG | + | chr1_4:9659089-9659108 | None:intergenic | 60.0% |
!! | ATCTCTGGTACGGCTCGGTG+CGG | - | chr1_4:9659253-9659272 | Msa0149130:intron | 60.0% |
! | GAAGATTTGGTCCCTGGCGG+CGG | - | chr1_4:9659376-9659395 | Msa0149130:intron | 60.0% |
GGGGGCAAGGTAGCTAGAAG+GGG | + | chr1_4:9660334-9660353 | None:intergenic | 60.0% | |
GGGGGGCAAGGTAGCTAGAA+GGG | + | chr1_4:9660335-9660354 | None:intergenic | 60.0% | |
GCAAGGAATCTCCCTAGCCG+AGG | + | chr1_4:9661771-9661790 | None:intergenic | 60.0% | |
CGTTCTCTGCAGCTGCAGCA+AGG | + | chr1_4:9661788-9661807 | None:intergenic | 60.0% | |
GGAAGTGACCTTGACCTGGC+CGG | - | chr1_4:9663004-9663023 | Msa0149130:intron | 60.0% | |
ATGGTACACCGGCCAGGTCA+AGG | + | chr1_4:9663015-9663034 | None:intergenic | 60.0% | |
GCAGCTATTGACGCTCCGGG+AGG | - | chr1_4:9653798-9653817 | Msa0149130:CDS | 65.0% | |
CTGTTGCTGCTGCTGCTCCC+TGG | + | chr1_4:9654834-9654853 | None:intergenic | 65.0% | |
CAGCTACTGGCCAGCCGTCA+GGG | - | chr1_4:9655350-9655369 | Msa0149130:CDS | 65.0% | |
GGATCGCCCCTTCAAGCAGG+TGG | - | chr1_4:9657442-9657461 | Msa0149130:intron | 65.0% | |
! | GGAGGTGGTGGCAGTGTCAC+CGG | - | chr1_4:9657773-9657792 | Msa0149130:CDS | 65.0% |
GGTGGCAGTGTCACCGGAGA+TGG | - | chr1_4:9657779-9657798 | Msa0149130:CDS | 65.0% | |
TATCAAGGGGGGGTGGGTGG+TGG | - | chr1_4:9658930-9658949 | Msa0149130:CDS | 65.0% | |
GGGGGGGCAAGGTAGCTAGA+AGG | + | chr1_4:9660336-9660355 | None:intergenic | 65.0% | |
GCAGCTACTGGCCAGCCGTC+AGG | - | chr1_4:9655349-9655368 | Msa0149130:CDS | 70.0% | |
CCTTCGGGACCCGCAGCTCT+GGG | + | chr1_4:9656164-9656183 | None:intergenic | 70.0% | |
TCCTTCGGGACCCGCAGCTC+TGG | + | chr1_4:9656165-9656184 | None:intergenic | 70.0% | |
!! | TGGTACGGCTCGGTGCGGCT+AGG | - | chr1_4:9659258-9659277 | Msa0149130:intron | 70.0% |
ACAAGCCACTGCCGCCGCCA+GGG | + | chr1_4:9659390-9659409 | None:intergenic | 70.0% | |
TACAAGCCACTGCCGCCGCC+AGG | + | chr1_4:9659391-9659410 | None:intergenic | 70.0% | |
CCCAGAGCTGCGGGTCCCGA+AGG | - | chr1_4:9656161-9656180 | Msa0149130:intron | 75.0% | |
TTGGTCCCTGGCGGCGGCAG+TGG | - | chr1_4:9659382-9659401 | Msa0149130:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 9652969 | 9663294 | 9652969 | ID=Msa0149130;Name=Msa0149130 |
chr1_4 | mRNA | 9652969 | 9663294 | 9652969 | ID=Msa0149130-mRNA-1;Parent=Msa0149130;Name=Msa0149130-mRNA-1;_AED=0.08;_eAED=0.08;_QI=187|1|1|1|1|1|18|283|901 |
chr1_4 | exon | 9652969 | 9653395 | 9652969 | ID=Msa0149130-mRNA-1:exon:4063;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9653696 | 9653902 | 9653696 | ID=Msa0149130-mRNA-1:exon:4062;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9654406 | 9654522 | 9654406 | ID=Msa0149130-mRNA-1:exon:4061;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9654632 | 9654787 | 9654632 | ID=Msa0149130-mRNA-1:exon:4060;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9655268 | 9655417 | 9655268 | ID=Msa0149130-mRNA-1:exon:4059;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9655599 | 9655708 | 9655599 | ID=Msa0149130-mRNA-1:exon:4058;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9657771 | 9657912 | 9657771 | ID=Msa0149130-mRNA-1:exon:4057;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9657999 | 9658250 | 9657999 | ID=Msa0149130-mRNA-1:exon:4056;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9658428 | 9658631 | 9658428 | ID=Msa0149130-mRNA-1:exon:4055;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9658759 | 9659070 | 9658759 | ID=Msa0149130-mRNA-1:exon:4054;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9659796 | 9659845 | 9659796 | ID=Msa0149130-mRNA-1:exon:4053;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9660060 | 9660135 | 9660060 | ID=Msa0149130-mRNA-1:exon:4052;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9660218 | 9660296 | 9660218 | ID=Msa0149130-mRNA-1:exon:4051;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9660892 | 9660971 | 9660892 | ID=Msa0149130-mRNA-1:exon:4050;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9661062 | 9661448 | 9661062 | ID=Msa0149130-mRNA-1:exon:4049;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9662352 | 9662461 | 9662352 | ID=Msa0149130-mRNA-1:exon:4048;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9662551 | 9662648 | 9662551 | ID=Msa0149130-mRNA-1:exon:4047;Parent=Msa0149130-mRNA-1 |
chr1_4 | exon | 9663076 | 9663294 | 9663076 | ID=Msa0149130-mRNA-1:exon:4046;Parent=Msa0149130-mRNA-1 |
chr1_4 | five_prime_UTR | 9663108 | 9663294 | 9663108 | ID=Msa0149130-mRNA-1:five_prime_utr;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9663076 | 9663107 | 9663076 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9662551 | 9662648 | 9662551 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9662352 | 9662461 | 9662352 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9661062 | 9661448 | 9661062 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9660892 | 9660971 | 9660892 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9660218 | 9660296 | 9660218 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9660060 | 9660135 | 9660060 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9659796 | 9659845 | 9659796 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9658759 | 9659070 | 9658759 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9658428 | 9658631 | 9658428 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9657999 | 9658250 | 9657999 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9657771 | 9657912 | 9657771 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9655599 | 9655708 | 9655599 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9655268 | 9655417 | 9655268 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9654632 | 9654787 | 9654632 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9654406 | 9654522 | 9654406 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9653696 | 9653902 | 9653696 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | CDS | 9653252 | 9653395 | 9653252 | ID=Msa0149130-mRNA-1:cds;Parent=Msa0149130-mRNA-1 |
chr1_4 | three_prime_UTR | 9652969 | 9653251 | 9652969 | ID=Msa0149130-mRNA-1:three_prime_utr;Parent=Msa0149130-mRNA-1 |
Gene Sequence |
Protein sequence |