Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153050 | sp|Q8L3W1|VRN1_ARATH | 50.442 | 113 | 51 | 3 | 74 | 183 | 21 | 131 | 5.69e-25 | 110 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153050 | A0A072VGN2 | 59.524 | 252 | 49 | 1 | 4 | 255 | 5 | 203 | 2.12e-92 | 298 |
Gene ID | Type | Classification |
---|---|---|
Msa0153050 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153050 | MtrunA17_Chr1g0162411 | 59.524 | 252 | 49 | 1 | 4 | 255 | 5 | 203 | 1.04e-94 | 298 |
Msa0153050 | MtrunA17_Chr5g0422121 | 46.301 | 365 | 49 | 5 | 417 | 634 | 652 | 1016 | 1.79e-73 | 257 |
Msa0153050 | MtrunA17_Chr5g0422121 | 49.510 | 204 | 90 | 2 | 230 | 420 | 328 | 531 | 4.63e-48 | 182 |
Msa0153050 | MtrunA17_Chr4g0027911 | 36.501 | 463 | 164 | 8 | 242 | 633 | 82 | 485 | 2.07e-72 | 249 |
Msa0153050 | MtrunA17_Chr6g0478941 | 41.644 | 365 | 66 | 5 | 417 | 634 | 303 | 667 | 1.41e-68 | 240 |
Msa0153050 | MtrunA17_Chr6g0478941 | 42.593 | 162 | 51 | 2 | 301 | 420 | 5 | 166 | 9.76e-26 | 113 |
Msa0153050 | MtrunA17_Chr1g0170491 | 41.370 | 365 | 67 | 5 | 417 | 634 | 678 | 1042 | 2.71e-68 | 241 |
Msa0153050 | MtrunA17_Chr1g0170491 | 39.819 | 221 | 91 | 2 | 242 | 420 | 321 | 541 | 2.77e-39 | 155 |
Msa0153050 | MtrunA17_Chr4g0053141 | 41.370 | 365 | 67 | 5 | 417 | 634 | 678 | 1042 | 6.09e-68 | 241 |
Msa0153050 | MtrunA17_Chr4g0053141 | 39.819 | 221 | 91 | 2 | 242 | 420 | 321 | 541 | 3.40e-39 | 155 |
Msa0153050 | MtrunA17_Chr6g0452431 | 41.096 | 365 | 68 | 5 | 417 | 634 | 600 | 964 | 1.06e-67 | 239 |
Msa0153050 | MtrunA17_Chr4g0044301 | 41.096 | 365 | 68 | 5 | 417 | 634 | 678 | 1042 | 1.81e-67 | 239 |
Msa0153050 | MtrunA17_Chr4g0044301 | 39.819 | 221 | 91 | 2 | 242 | 420 | 321 | 541 | 1.03e-39 | 156 |
Msa0153050 | MtrunA17_Chr3g0105561 | 40.822 | 365 | 69 | 5 | 417 | 634 | 269 | 633 | 5.17e-67 | 237 |
Msa0153050 | MtrunA17_Chr3g0105561 | 37.121 | 132 | 41 | 2 | 331 | 420 | 1 | 132 | 2.44e-14 | 76.6 |
Msa0153050 | MtrunA17_Chr2g0306251 | 40.548 | 365 | 70 | 5 | 417 | 634 | 537 | 901 | 1.06e-66 | 237 |
Msa0153050 | MtrunA17_Chr2g0306251 | 38.462 | 221 | 94 | 2 | 242 | 420 | 180 | 400 | 1.26e-35 | 144 |
Msa0153050 | MtrunA17_Chr2g0306511 | 40.822 | 365 | 69 | 5 | 417 | 634 | 678 | 1042 | 1.10e-66 | 237 |
Msa0153050 | MtrunA17_Chr2g0306511 | 38.462 | 221 | 94 | 2 | 242 | 420 | 321 | 541 | 1.00e-36 | 147 |
Msa0153050 | MtrunA17_Chr8g0363431 | 40.822 | 365 | 69 | 5 | 417 | 634 | 720 | 1084 | 1.86e-66 | 236 |
Msa0153050 | MtrunA17_Chr8g0363431 | 39.819 | 221 | 91 | 2 | 242 | 420 | 363 | 583 | 3.98e-39 | 155 |
Msa0153050 | MtrunA17_Chr4g0019441 | 40.274 | 365 | 71 | 5 | 417 | 634 | 654 | 1018 | 8.26e-66 | 234 |
Msa0153050 | MtrunA17_Chr4g0019441 | 38.462 | 221 | 94 | 2 | 242 | 420 | 297 | 517 | 1.73e-36 | 147 |
Msa0153050 | MtrunA17_Chr6g0475571 | 42.943 | 333 | 64 | 5 | 417 | 623 | 317 | 649 | 1.15e-64 | 226 |
Msa0153050 | MtrunA17_Chr6g0475571 | 39.884 | 173 | 62 | 2 | 290 | 420 | 8 | 180 | 2.10e-25 | 111 |
Msa0153050 | MtrunA17_Chr1g0162441 | 52.466 | 223 | 50 | 3 | 2 | 221 | 3 | 172 | 1.44e-63 | 216 |
Msa0153050 | MtrunA17_Chr1g0172201 | 40.110 | 364 | 71 | 5 | 417 | 633 | 217 | 580 | 1.37e-62 | 222 |
Msa0153050 | MtrunA17_Chr1g0172201 | 52.239 | 67 | 32 | 0 | 351 | 417 | 11 | 77 | 2.91e-13 | 73.2 |
Msa0153050 | MtrunA17_Chr2g0306051 | 40.351 | 342 | 57 | 5 | 417 | 611 | 646 | 987 | 3.43e-58 | 211 |
Msa0153050 | MtrunA17_Chr2g0306051 | 39.819 | 221 | 91 | 2 | 242 | 420 | 288 | 508 | 1.66e-38 | 152 |
Msa0153050 | MtrunA17_Chr4g0018081 | 39.233 | 339 | 68 | 6 | 417 | 634 | 576 | 897 | 5.51e-56 | 205 |
Msa0153050 | MtrunA17_Chr4g0018081 | 42.632 | 190 | 85 | 5 | 242 | 420 | 263 | 439 | 2.24e-31 | 130 |
Msa0153050 | MtrunA17_Chr2g0306241 | 42.333 | 300 | 52 | 4 | 417 | 595 | 192 | 491 | 3.22e-55 | 197 |
Msa0153050 | MtrunA17_Chr1g0170501 | 42.193 | 301 | 53 | 4 | 417 | 596 | 494 | 794 | 2.58e-54 | 199 |
Msa0153050 | MtrunA17_Chr3g0111291 | 50.244 | 205 | 31 | 3 | 501 | 634 | 9 | 213 | 1.37e-44 | 162 |
Msa0153050 | MtrunA17_Chr4g0020701 | 40.271 | 221 | 90 | 2 | 242 | 420 | 300 | 520 | 2.25e-40 | 155 |
Msa0153050 | MtrunA17_Chr2g0306271 | 39.819 | 221 | 91 | 2 | 242 | 420 | 321 | 541 | 4.87e-39 | 154 |
Msa0153050 | MtrunA17_Chr2g0306271 | 44.503 | 191 | 30 | 2 | 417 | 531 | 678 | 868 | 1.29e-35 | 143 |
Msa0153050 | MtrunA17_Chr0c01g0489031 | 39.367 | 221 | 92 | 2 | 242 | 420 | 321 | 541 | 1.56e-38 | 152 |
Msa0153050 | MtrunA17_Chr0c01g0489031 | 45.026 | 191 | 29 | 2 | 417 | 531 | 678 | 868 | 8.20e-35 | 141 |
Msa0153050 | MtrunA17_Chr3g0096731 | 38.528 | 231 | 100 | 2 | 232 | 420 | 72 | 302 | 3.70e-38 | 150 |
Msa0153050 | MtrunA17_Chr3g0096731 | 43.455 | 191 | 32 | 2 | 417 | 531 | 439 | 629 | 1.02e-34 | 139 |
Msa0153050 | MtrunA17_Chr1g0175041 | 38.914 | 221 | 93 | 2 | 242 | 420 | 336 | 556 | 3.79e-38 | 151 |
Msa0153050 | MtrunA17_Chr1g0175041 | 55.856 | 111 | 24 | 1 | 417 | 502 | 693 | 803 | 7.66e-28 | 119 |
Msa0153050 | MtrunA17_Chr8g0358641 | 38.589 | 241 | 105 | 3 | 223 | 420 | 300 | 540 | 2.34e-37 | 147 |
Msa0153050 | MtrunA17_Chr7g0231051 | 38.095 | 231 | 101 | 2 | 232 | 420 | 339 | 569 | 9.11e-37 | 146 |
Msa0153050 | MtrunA17_Chr4g0033961 | 37.443 | 219 | 81 | 3 | 1 | 216 | 1 | 166 | 5.08e-36 | 140 |
Msa0153050 | MtrunA17_Chr4g0044321 | 42.408 | 191 | 39 | 3 | 514 | 633 | 95 | 285 | 3.31e-33 | 133 |
Msa0153050 | MtrunA17_Chr8g0367821 | 55.455 | 110 | 24 | 1 | 417 | 501 | 303 | 412 | 2.32e-28 | 118 |
Msa0153050 | MtrunA17_Chr8g0367821 | 40.964 | 166 | 55 | 3 | 298 | 420 | 1 | 166 | 4.28e-26 | 111 |
Msa0153050 | MtrunA17_Chr2g0313291 | 51.351 | 111 | 29 | 1 | 417 | 502 | 77 | 187 | 7.43e-26 | 107 |
Msa0153050 | MtrunA17_Chr1g0162421 | 70.492 | 61 | 18 | 0 | 70 | 130 | 4 | 64 | 3.13e-25 | 99.0 |
Msa0153050 | MtrunA17_Chr5g0429931 | 46.914 | 81 | 43 | 0 | 74 | 154 | 10 | 90 | 1.33e-18 | 85.9 |
Msa0153050 | MtrunA17_Chr2g0296611 | 42.000 | 100 | 32 | 1 | 561 | 634 | 1 | 100 | 1.34e-18 | 82.8 |
Msa0153050 | MtrunA17_Chr3g0077451 | 48.148 | 81 | 42 | 0 | 74 | 154 | 11 | 91 | 2.57e-18 | 84.7 |
Msa0153050 | MtrunA17_Chr6g0470931 | 50.575 | 87 | 18 | 1 | 440 | 501 | 10 | 96 | 1.74e-16 | 76.6 |
Msa0153050 | MtrunA17_Chr4g0009491 | 44.828 | 87 | 48 | 0 | 68 | 154 | 234 | 320 | 3.26e-16 | 81.6 |
Msa0153050 | MtrunA17_Chr4g0009491 | 46.429 | 84 | 43 | 1 | 74 | 155 | 12 | 95 | 4.35e-15 | 77.8 |
Msa0153050 | MtrunA17_Chr3g0103181 | 46.429 | 84 | 43 | 1 | 74 | 155 | 25 | 108 | 6.43e-16 | 78.6 |
Msa0153050 | MtrunA17_Chr5g0419201 | 32.847 | 137 | 83 | 3 | 75 | 202 | 32 | 168 | 6.67e-16 | 76.6 |
Msa0153050 | MtrunA17_Chr3g0077411 | 45.000 | 100 | 52 | 2 | 69 | 165 | 35 | 134 | 6.81e-16 | 80.9 |
Msa0153050 | MtrunA17_Chr3g0077411 | 44.318 | 88 | 48 | 1 | 68 | 154 | 271 | 358 | 2.93e-15 | 79.0 |
Msa0153050 | MtrunA17_Chr3g0077381 | 47.619 | 84 | 42 | 1 | 74 | 155 | 35 | 118 | 6.98e-16 | 80.5 |
Msa0153050 | MtrunA17_Chr3g0077381 | 43.678 | 87 | 49 | 0 | 68 | 154 | 256 | 342 | 8.89e-15 | 77.0 |
Msa0153050 | MtrunA17_Chr3g0077461 | 47.423 | 97 | 48 | 3 | 71 | 164 | 19 | 115 | 1.15e-15 | 80.1 |
Msa0153050 | MtrunA17_Chr3g0077461 | 41.379 | 87 | 51 | 0 | 68 | 154 | 246 | 332 | 1.15e-15 | 80.1 |
Msa0153050 | MtrunA17_Chr3g0103151 | 46.429 | 84 | 43 | 2 | 74 | 155 | 25 | 108 | 1.77e-15 | 74.3 |
Msa0153050 | MtrunA17_Chr3g0103171 | 42.529 | 87 | 48 | 1 | 74 | 158 | 5 | 91 | 3.58e-15 | 76.3 |
Msa0153050 | MtrunA17_Chr1g0163071 | 32.231 | 121 | 71 | 2 | 75 | 192 | 2 | 114 | 1.73e-14 | 74.7 |
Msa0153050 | MtrunA17_Chr3g0077361 | 36.792 | 106 | 59 | 2 | 69 | 166 | 50 | 155 | 1.75e-14 | 76.6 |
Msa0153050 | MtrunA17_Chr3g0103191 | 45.349 | 86 | 45 | 2 | 74 | 157 | 25 | 110 | 1.83e-14 | 73.9 |
Msa0153050 | MtrunA17_Chr7g0233571 | 30.814 | 172 | 102 | 6 | 61 | 220 | 12 | 178 | 5.75e-14 | 71.6 |
Msa0153050 | MtrunA17_Chr7g0233561 | 41.667 | 96 | 53 | 2 | 62 | 155 | 22 | 116 | 6.43e-14 | 73.6 |
Msa0153050 | MtrunA17_Chr8g0390841 | 27.749 | 191 | 119 | 5 | 47 | 226 | 26 | 208 | 9.47e-14 | 74.3 |
Msa0153050 | MtrunA17_Chr3g0084281 | 39.806 | 103 | 37 | 1 | 417 | 494 | 730 | 832 | 1.72e-13 | 73.9 |
Msa0153050 | MtrunA17_Chr2g0313281 | 49.275 | 69 | 35 | 0 | 352 | 420 | 399 | 467 | 4.66e-13 | 72.0 |
Msa0153050 | MtrunA17_Chr7g0233521 | 40.964 | 83 | 47 | 1 | 75 | 155 | 2 | 84 | 5.38e-13 | 70.1 |
Msa0153050 | MtrunA17_Chr7g0233541 | 39.759 | 83 | 48 | 1 | 75 | 155 | 2 | 84 | 6.92e-13 | 69.7 |
Msa0153050 | MtrunA17_Chr7g0233531 | 40.000 | 80 | 48 | 0 | 75 | 154 | 2 | 81 | 1.24e-12 | 68.9 |
Msa0153050 | MtrunA17_Chr3g0131891 | 40.000 | 90 | 52 | 1 | 68 | 155 | 28 | 117 | 4.67e-12 | 67.8 |
Msa0153050 | MtrunA17_Chr3g0096001 | 26.471 | 238 | 93 | 4 | 417 | 572 | 623 | 860 | 5.51e-12 | 69.3 |
Msa0153050 | MtrunA17_Chr1g0208771 | 34.921 | 126 | 63 | 4 | 70 | 192 | 8 | 117 | 1.82e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153050 | AT3G18990.1 | 50.442 | 113 | 51 | 3 | 74 | 183 | 21 | 131 | 5.78e-26 | 110 |
Msa0153050 | AT3G18990.2 | 50.442 | 113 | 51 | 3 | 74 | 183 | 21 | 131 | 1.40e-25 | 109 |
Msa0153050 | AT4G01580.1 | 39.744 | 78 | 47 | 0 | 74 | 151 | 45 | 122 | 1.65e-12 | 67.0 |
Msa0153050 | AT3G18960.3 | 36.471 | 85 | 54 | 0 | 67 | 151 | 1 | 85 | 5.29e-12 | 65.1 |
Msa0153050 | AT3G18960.2 | 40.000 | 75 | 45 | 0 | 74 | 148 | 45 | 119 | 1.42e-11 | 64.3 |
Msa0153050 | AT3G18960.1 | 40.000 | 75 | 45 | 0 | 74 | 148 | 45 | 119 | 1.53e-11 | 64.7 |
Find 146 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGAATTACCCATTGAATTT+TGG | 0.151846 | 1_4:-16135812 | Msa0153050:CDS |
TAAAATCTTCCTCTTAAGTT+TGG | 0.223504 | 1_4:+16133943 | None:intergenic |
ACATCACGGCCAAGGATTTC+TGG | 0.229722 | 1_4:+16137051 | None:intergenic |
CTCTTAAGTTTGGGTAAATC+TGG | 0.239574 | 1_4:+16133953 | None:intergenic |
CAGATGTTTGCATCGGAATT+AGG | 0.252365 | 1_4:-16135407 | Msa0153050:intron |
TTTCTTGCTAATATTAATAT+TGG | 0.261754 | 1_4:-16135959 | Msa0153050:CDS |
TATCGACTCCTTTGATTTCC+TGG | 0.264885 | 1_4:-16136224 | Msa0153050:CDS |
TGTTTCCTCACAAAATTATC+TGG | 0.294456 | 1_4:+16136538 | None:intergenic |
GTTGCATATGTCGGCACTTA+TGG | 0.299904 | 1_4:-16134215 | Msa0153050:CDS |
GTATGCTTCATGGCAGTTAA+AGG | 0.311308 | 1_4:-16134469 | Msa0153050:CDS |
GGATTTAATTTGTTTGCCTT+TGG | 0.313227 | 1_4:-16135771 | Msa0153050:CDS |
GAATTACCCGACCCATGATT+TGG | 0.324464 | 1_4:-16134436 | Msa0153050:CDS |
ACACCTAGTGGCGTGAAATT+AGG | 0.324497 | 1_4:-16134136 | Msa0153050:CDS |
TTGCTTTGGTGGGTTATTGC+CGG | 0.324653 | 1_4:-16134725 | Msa0153050:CDS |
GTCGCAACTGTCACTGTTCC+TGG | 0.329322 | 1_4:-16136496 | Msa0153050:CDS |
AAAATCTTCCTCTTAAGTTT+GGG | 0.333148 | 1_4:+16133944 | None:intergenic |
CTGTTCCTGGCGGCACAGTC+TGG | 0.341469 | 1_4:-16136483 | Msa0153050:CDS |
TGGCTCGGTGACCACATCTT+TGG | 0.347533 | 1_4:-16135840 | Msa0153050:CDS |
GTGGTCACCGAGCCATTGGC+TGG | 0.356327 | 1_4:+16135848 | None:intergenic |
TCCGATGCAAACATCTGATA+TGG | 0.357361 | 1_4:+16135413 | None:intergenic |
AAATAGGATTACAGATTTGA+TGG | 0.357812 | 1_4:+16136263 | None:intergenic |
CCCGACCCATGATTTGGAAT+TGG | 0.362591 | 1_4:-16134430 | Msa0153050:CDS |
GGATCCTTTCTTCCCGTGAC+TGG | 0.363182 | 1_4:-16137141 | Msa0153050:CDS |
GAGCCGGACAACTTGATTAA+AGG | 0.369502 | 1_4:-16136007 | Msa0153050:CDS |
TGCTTAGATTGAAGGGTTGT+TGG | 0.371314 | 1_4:+16138227 | None:intergenic |
CTGGCGTCTAGGATTGAAAA+AGG | 0.378642 | 1_4:-16136464 | Msa0153050:CDS |
GGCACTTATGGTAAAGGAAT+TGG | 0.381306 | 1_4:-16134203 | Msa0153050:CDS |
TTGTTTGCCTTTGGAACAAA+TGG | 0.392233 | 1_4:-16135762 | Msa0153050:CDS |
GCAGTTCATAGATTTAAGTT+TGG | 0.408687 | 1_4:-16134170 | Msa0153050:CDS |
AGTTGTTGAAGTATAAGTTT+TGG | 0.411686 | 1_4:-16134872 | Msa0153050:CDS |
TGTGATGTTTGCTTCATTGA+AGG | 0.414056 | 1_4:-16135582 | Msa0153050:CDS |
CAATGATTCTACTGGATGTA+TGG | 0.415180 | 1_4:-16136164 | Msa0153050:CDS |
AGTTGCGACATTTGAAAGTT+GGG | 0.416194 | 1_4:+16136510 | None:intergenic |
CAGATTTACCCAAACTTAAG+AGG | 0.419388 | 1_4:-16133952 | Msa0153050:CDS |
AACCCTTCAATCTAAGCAAT+TGG | 0.424880 | 1_4:-16138222 | Msa0153050:intron |
CCAACAAAGACAAGAAAATC+AGG | 0.425167 | 1_4:-16136113 | Msa0153050:CDS |
TCTTGAGTTAAATTATTGTC+CGG | 0.429304 | 1_4:-16134278 | Msa0153050:CDS |
TTACCAATTGCTTAGATTGA+AGG | 0.430305 | 1_4:+16138219 | None:intergenic |
TGATATGGTGTCGTTGATAC+AGG | 0.433848 | 1_4:+16135428 | None:intergenic |
GGGGTAATTGGAGGCATCGT+TGG | 0.436754 | 1_4:-16135624 | Msa0153050:intron |
GACTTTAGAGTGGATGAGAA+TGG | 0.439245 | 1_4:-16134007 | Msa0153050:CDS |
CAGTTGCGACATTTGAAAGT+TGG | 0.442003 | 1_4:+16136509 | None:intergenic |
TGTGTTCATAGATGATATAT+TGG | 0.446445 | 1_4:-16134976 | Msa0153050:intron |
CTGCCGCCAATTCCAAATCA+TGG | 0.447067 | 1_4:+16134424 | None:intergenic |
TCTACATCGCCAAAATTCAA+TGG | 0.448880 | 1_4:+16135803 | None:intergenic |
TATTGCCGGAGGTTCATAGA+AGG | 0.449352 | 1_4:-16134711 | Msa0153050:CDS |
TGTTGAGGAGGGTGCAGAGC+CGG | 0.452893 | 1_4:-16136023 | Msa0153050:CDS |
GGGTAATTGGAGGCATCGTT+GGG | 0.454019 | 1_4:-16135623 | Msa0153050:intron |
CTTTCTTCATGCCTTGTGAT+CGG | 0.459894 | 1_4:-16137162 | Msa0153050:CDS |
AAGTTGTGGCGTATGCTTCA+TGG | 0.460409 | 1_4:-16134479 | Msa0153050:CDS |
GTTAAATTATTGTCCGGGTA+AGG | 0.463241 | 1_4:-16134272 | Msa0153050:CDS |
AATGCTCCAGTAGGGTTTGA+AGG | 0.463928 | 1_4:+16136193 | None:intergenic |
ACAATGAGGAGCCGGGTTGA+AGG | 0.464834 | 1_4:-16136292 | Msa0153050:CDS |
CCACCAAAGCAAGAAAATTA+CGG | 0.465895 | 1_4:+16134736 | None:intergenic |
CGATCACAAGGCATGAAGAA+AGG | 0.474012 | 1_4:+16137163 | None:intergenic |
TTATGTCTCTTATGTTGAAA+GGG | 0.478228 | 1_4:-16135886 | Msa0153050:CDS |
ATTACATCCATTTGTTCCAA+AGG | 0.480288 | 1_4:+16135755 | None:intergenic |
AGGCAGAAGGATCCAGTCAC+GGG | 0.482356 | 1_4:+16137129 | None:intergenic |
GTTATGTCTCTTATGTTGAA+AGG | 0.489077 | 1_4:-16135887 | Msa0153050:CDS |
GATTGTGTTCCAGACCTTGA+AGG | 0.492748 | 1_4:-16134913 | Msa0153050:CDS |
GGTTTGAAGGTGCTGAATCC+AGG | 0.493431 | 1_4:+16136206 | None:intergenic |
GGATCCAGTCACGGGAAGAA+AGG | 0.494717 | 1_4:+16137137 | None:intergenic |
TGGTCACCGAGCCATTGGCT+GGG | 0.496936 | 1_4:+16135849 | None:intergenic |
TTCAAGAAAGAAGTTGAAGA+TGG | 0.497131 | 1_4:-16136077 | Msa0153050:CDS |
ATCGTTGGGTGAAGAAGCTC+AGG | 0.497181 | 1_4:-16135609 | Msa0153050:CDS |
TGCCTTGCAATGCTCCAGTA+GGG | 0.497562 | 1_4:+16136185 | None:intergenic |
AAAATCCTTCTATGAACCTC+CGG | 0.497959 | 1_4:+16134706 | None:intergenic |
ATTATTCAACAATGAGGAGC+CGG | 0.501754 | 1_4:-16136300 | Msa0153050:CDS |
AGATGTGGTCACCGAGCCAT+TGG | 0.502523 | 1_4:+16135844 | None:intergenic |
ATACCTTTAATCAAGTTGTC+CGG | 0.503043 | 1_4:+16136004 | None:intergenic |
TTTGACGTTGTTGACTCGTA+AGG | 0.503865 | 1_4:-16134667 | Msa0153050:CDS |
TTGCAAGGCAATGATTCTAC+TGG | 0.505538 | 1_4:-16136172 | Msa0153050:CDS |
GGCGGCACAGTCTGGCGTCT+AGG | 0.507179 | 1_4:-16136475 | Msa0153050:CDS |
CTACATCGCCAAAATTCAAT+GGG | 0.507390 | 1_4:+16135804 | None:intergenic |
CCAATTCCAAATCATGGGTC+GGG | 0.507654 | 1_4:+16134430 | None:intergenic |
CTTGAGTTAAATTATTGTCC+GGG | 0.511523 | 1_4:-16134277 | Msa0153050:CDS |
CAATGAGGAGCCGGGTTGAA+GGG | 0.513116 | 1_4:-16136291 | Msa0153050:CDS |
TACCAATTGCTTAGATTGAA+GGG | 0.513266 | 1_4:+16138220 | None:intergenic |
GTCTCTTATGTTGAAAGGGA+TGG | 0.513324 | 1_4:-16135882 | Msa0153050:CDS |
GACCCATGATTTGGAATTGG+CGG | 0.513925 | 1_4:-16134427 | Msa0153050:CDS |
AGAATGAGCTTGTTAAAAGA+AGG | 0.513925 | 1_4:+16138251 | None:intergenic |
TCAGCACCTTCAAACCCTAC+TGG | 0.515463 | 1_4:-16136199 | Msa0153050:CDS |
GATCACAAGGCATGAAGAAA+GGG | 0.517962 | 1_4:+16137164 | None:intergenic |
GCCTTGCGGCCAGAAATCCT+TGG | 0.518554 | 1_4:-16137060 | Msa0153050:CDS |
TAAAGAGAAGGACTTTAGAG+TGG | 0.528332 | 1_4:-16134017 | Msa0153050:CDS |
TTGCCTTGCAATGCTCCAGT+AGG | 0.535055 | 1_4:+16136184 | None:intergenic |
TTGAAGGTTGAAAGTGAGAC+GGG | 0.536074 | 1_4:-16135566 | Msa0153050:CDS |
GTTGAAAGTGAGACGGGAGT+TGG | 0.540614 | 1_4:-16135560 | Msa0153050:CDS |
GTCATTGACACCCCAGCCAA+TGG | 0.540818 | 1_4:-16135860 | Msa0153050:CDS |
TATGTCGGCACTTATGGTAA+AGG | 0.544766 | 1_4:-16134209 | Msa0153050:CDS |
GCCAAGGATTTCTGGCCGCA+AGG | 0.545650 | 1_4:+16137059 | None:intergenic |
TTGACGTTGTTGACTCGTAA+GGG | 0.546020 | 1_4:-16134666 | Msa0153050:CDS |
TCTGGAAACTCATTCACTAC+CGG | 0.546789 | 1_4:+16135530 | None:intergenic |
GCCAATTCCAAATCATGGGT+CGG | 0.550193 | 1_4:+16134429 | None:intergenic |
ACGGATCTTAGAAACTGACT+TGG | 0.550274 | 1_4:+16134755 | None:intergenic |
TGTTGGATATGATTCTCCGC+TGG | 0.554776 | 1_4:+16136130 | None:intergenic |
AGACGCCAGACTGTGCCGCC+AGG | 0.556863 | 1_4:+16136478 | None:intergenic |
GAACGCTACTCAATTGACAT+TGG | 0.561310 | 1_4:-16136397 | Msa0153050:CDS |
TGCCGCCAATTCCAAATCAT+GGG | 0.569308 | 1_4:+16134425 | None:intergenic |
TTATTCAACAATGAGGAGCC+GGG | 0.570623 | 1_4:-16136299 | Msa0153050:CDS |
GGTCACCGAGCCATTGGCTG+GGG | 0.572344 | 1_4:+16135850 | None:intergenic |
ATTCCTAATTTCACGCCACT+AGG | 0.573471 | 1_4:+16134133 | None:intergenic |
GTTACCACACTGGCCTTACC+CGG | 0.577241 | 1_4:+16134259 | None:intergenic |
AACCCTACTGGAGCATTGCA+AGG | 0.577669 | 1_4:-16136187 | Msa0153050:CDS |
TATATTGGTGTATTCAAAGT+CGG | 0.577825 | 1_4:-16134961 | Msa0153050:CDS |
GGTGTATTCAAAGTCGGAGG+AGG | 0.578564 | 1_4:-16134955 | Msa0153050:CDS |
GTTTACTTTGAGTGTTGAGG+AGG | 0.578967 | 1_4:-16136035 | Msa0153050:CDS |
GGCAGTTAAAGGTTCATGAA+AGG | 0.585659 | 1_4:-16134458 | Msa0153050:CDS |
ACAGGTGAGTTTCTAGAGCA+AGG | 0.586252 | 1_4:+16137109 | None:intergenic |
AACTCCACTTCTCTCTCAAG+CGG | 0.589079 | 1_4:+16135479 | None:intergenic |
ATTGAAGGTTGAAAGTGAGA+CGG | 0.592792 | 1_4:-16135567 | Msa0153050:CDS |
GGATTACAGATTTGATGGAA+AGG | 0.593449 | 1_4:+16136268 | None:intergenic |
TAAGAAGTCGTTGCATATGT+CGG | 0.594263 | 1_4:-16134224 | Msa0153050:CDS |
AATAGTCTATCTCAGCAGTA+CGG | 0.595590 | 1_4:+16136320 | None:intergenic |
TGTGCACAACATCACGGCCA+AGG | 0.595740 | 1_4:+16137043 | None:intergenic |
CGGATCTTAGAAACTGACTT+GGG | 0.598221 | 1_4:+16134756 | None:intergenic |
GATGGAAAGGCCCTTCAACC+CGG | 0.599017 | 1_4:+16136281 | None:intergenic |
AGTTTCTAGAGCAAGGCAGA+AGG | 0.600350 | 1_4:+16137116 | None:intergenic |
TTTACTTTGAGTGTTGAGGA+GGG | 0.600835 | 1_4:-16136034 | Msa0153050:CDS |
TGCTGAATCCAGGAAATCAA+AGG | 0.601479 | 1_4:+16136216 | None:intergenic |
CTTTGGTGGGTTATTGCCGG+AGG | 0.602615 | 1_4:-16134722 | Msa0153050:CDS |
TTACGAGTCAACAACGTCAA+AGG | 0.603689 | 1_4:+16134669 | None:intergenic |
TGACACCCCAGCCAATGGCT+CGG | 0.604558 | 1_4:-16135855 | Msa0153050:CDS |
CTTACCGCTTGAGAGAGAAG+TGG | 0.607306 | 1_4:-16135483 | Msa0153050:CDS |
ACCATATCAGATGTTTGCAT+CGG | 0.608867 | 1_4:-16135414 | Msa0153050:CDS |
AAGGCAGAAGGATCCAGTCA+CGG | 0.615665 | 1_4:+16137128 | None:intergenic |
GAAGAAAGGATCCGATCACA+AGG | 0.618896 | 1_4:+16137151 | None:intergenic |
ATTCAAACAAACCAAAGATG+TGG | 0.619500 | 1_4:+16135829 | None:intergenic |
TTCTTATGCATGTTGCCTTG+CGG | 0.619781 | 1_4:-16137074 | Msa0153050:CDS |
GGTGTTTACTTTGAGTGTTG+AGG | 0.622613 | 1_4:-16136038 | Msa0153050:CDS |
AGATGAATACTCAACTACTA+CGG | 0.624034 | 1_4:+16133909 | None:intergenic |
CAGAATTGTGCACAACATCA+CGG | 0.625852 | 1_4:+16137037 | None:intergenic |
GATTAATCAAGGTAAAGAGA+AGG | 0.628797 | 1_4:-16134029 | Msa0153050:intron |
TAAGAACAAACATGCAACAC+AGG | 0.631182 | 1_4:+16137091 | None:intergenic |
AAAGTCGGAGGAGGAGCATG+CGG | 0.640137 | 1_4:-16134946 | Msa0153050:CDS |
TAGACTATTATTCAACAATG+AGG | 0.648491 | 1_4:-16136306 | Msa0153050:CDS |
CAACGCATATGTTACCACAC+TGG | 0.654075 | 1_4:+16134249 | None:intergenic |
TTACTAGTATTCACATACGA+AGG | 0.667290 | 1_4:-16136370 | Msa0153050:CDS |
ATTGGTGTATTCAAAGTCGG+AGG | 0.670082 | 1_4:-16134958 | Msa0153050:CDS |
GTGAGCGAGTTGACACCTAG+TGG | 0.679216 | 1_4:-16134148 | Msa0153050:CDS |
GATGGAGAAGTCTCATGTGA+AGG | 0.687377 | 1_4:-16136059 | Msa0153050:CDS |
AGCTTGTTAAAAGAAGGACT+AGG | 0.695965 | 1_4:+16138257 | None:intergenic |
TATGGATCAACTGATACCAG+CGG | 0.714314 | 1_4:-16136146 | Msa0153050:CDS |
TATGTAGAATGGTCAAGTTG+TGG | 0.721809 | 1_4:-16134493 | Msa0153050:intron |
TTGTCCGGGTAAGGCCAGTG+TGG | 0.723460 | 1_4:-16134263 | Msa0153050:CDS |
GCAACTGTCACTGTTCCTGG+CGG | 0.742674 | 1_4:-16136493 | Msa0153050:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTTTTTTATCTTATGAT+GGG | - | chr1_4:16134047-16134066 | Msa0153050:intron | 10.0% |
!! | ATTAAATAAATAAATTGGTT+TGG | + | chr1_4:16135379-16135398 | None:intergenic | 10.0% |
!! | TCTCTATTAAATAAATAAAT+TGG | + | chr1_4:16135384-16135403 | None:intergenic | 10.0% |
!!! | GATTTTTTTTTATCTTATGA+TGG | - | chr1_4:16134046-16134065 | Msa0153050:intron | 15.0% |
!! | AAATTCAATCTTTATGAAAA+GGG | + | chr1_4:16134103-16134122 | None:intergenic | 15.0% |
!! | AAAATTCAATCTTTATGAAA+AGG | + | chr1_4:16134104-16134123 | None:intergenic | 15.0% |
!!! | ATTTTTTGGAATTTGTATAT+GGG | - | chr1_4:16134312-16134331 | Msa0153050:intron | 15.0% |
!!! | ATCAAAATAGTCAAATTTTA+GGG | + | chr1_4:16134357-16134376 | None:intergenic | 15.0% |
!!! | ATTGAAGTTTATTTTTTGTT+TGG | - | chr1_4:16134431-16134450 | Msa0153050:CDS | 15.0% |
!! | AAAAAAAATAAACATAAGCT+TGG | + | chr1_4:16135509-16135528 | None:intergenic | 15.0% |
!!! | TTTATTTTTTTTTTCCTCTT+TGG | - | chr1_4:16135517-16135536 | Msa0153050:CDS | 15.0% |
!! | TTTCTTGCTAATATTAATAT+TGG | - | chr1_4:16136220-16136239 | Msa0153050:CDS | 15.0% |
!! | AATTCAATCTTTATGAAAAG+GGG | + | chr1_4:16134102-16134121 | None:intergenic | 20.0% |
!!! | CATAAAGATTGAATTTTTCT+TGG | - | chr1_4:16134107-16134126 | Msa0153050:intron | 20.0% |
!!! | GATTTTTTGGAATTTGTATA+TGG | - | chr1_4:16134311-16134330 | Msa0153050:intron | 20.0% |
!!! | GATCAAAATAGTCAAATTTT+AGG | + | chr1_4:16134358-16134377 | None:intergenic | 20.0% |
!!! | TTTGGAATTGATTTTGTTTT+TGG | - | chr1_4:16134449-16134468 | Msa0153050:CDS | 20.0% |
!!! | AGAATTTCTCTTTCAATTTT+AGG | + | chr1_4:16134531-16134550 | None:intergenic | 20.0% |
!!! | AATTTTGATGACACAAATTT+AGG | + | chr1_4:16134556-16134575 | None:intergenic | 20.0% |
!! | TTAATATATGACACATTGAA+CGG | - | chr1_4:16134640-16134659 | Msa0153050:intron | 20.0% |
!! | ATTAACTACCATTATGAATA+TGG | + | chr1_4:16134801-16134820 | None:intergenic | 20.0% |
!!! | TGTTTCATTTATTTGCTTTT+TGG | - | chr1_4:16135326-16135345 | Msa0153050:intron | 20.0% |
!!! | GTTTCATTTATTTGCTTTTT+GGG | - | chr1_4:16135327-16135346 | Msa0153050:intron | 20.0% |
!!! | AATATTATTTTCAATTGCAG+AGG | - | chr1_4:16135615-16135634 | Msa0153050:intron | 20.0% |
!!! | TATAATTTTCCATCCTTATT+TGG | - | chr1_4:16137167-16137186 | Msa0153050:CDS | 20.0% |
!!! | AAAGTATTTGTTTGATCAAA+AGG | - | chr1_4:16137828-16137847 | Msa0153050:intron | 20.0% |
!!! | ATTGGAATTTTTTAAGGATT+AGG | - | chr1_4:16137876-16137895 | Msa0153050:intron | 20.0% |
!!! | TTATCTTATGATGGGTTTTT+AGG | - | chr1_4:16134055-16134074 | Msa0153050:intron | 25.0% |
!!! | TATCTTATGATGGGTTTTTA+GGG | - | chr1_4:16134056-16134075 | Msa0153050:intron | 25.0% |
! | AACTTGAAGATCAAAATCAT+GGG | + | chr1_4:16134145-16134164 | None:intergenic | 25.0% |
! | AAACTTGAAGATCAAAATCA+TGG | + | chr1_4:16134146-16134165 | None:intergenic | 25.0% |
!!! | ATGATTTTGATCTTCAAGTT+TGG | - | chr1_4:16134145-16134164 | Msa0153050:CDS | 25.0% |
!!! | TGATTTTGATCTTCAAGTTT+GGG | - | chr1_4:16134146-16134165 | Msa0153050:CDS | 25.0% |
!!! | GCTTAGGTTTTATGATTTTT+TGG | - | chr1_4:16134298-16134317 | Msa0153050:intron | 25.0% |
!!! | GAATTGATTTTGTTTTTGGT+TGG | - | chr1_4:16134453-16134472 | Msa0153050:CDS | 25.0% |
! | TATGAGCATTTACTAACATT+TGG | - | chr1_4:16135586-16135605 | Msa0153050:CDS | 25.0% |
! | TAGACTATTATTCAACAATG+AGG | - | chr1_4:16135873-16135892 | Msa0153050:CDS | 25.0% |
! | AAATAGGATTACAGATTTGA+TGG | + | chr1_4:16135919-16135938 | None:intergenic | 25.0% |
!!! | ATCTGTAATCCTATTTTTGA+AGG | - | chr1_4:16135923-16135942 | Msa0153050:CDS | 25.0% |
! | TTATGTCTCTTATGTTGAAA+GGG | - | chr1_4:16136293-16136312 | Msa0153050:CDS | 25.0% |
!! | TTGAATTACCCATTGAATTT+TGG | - | chr1_4:16136367-16136386 | Msa0153050:CDS | 25.0% |
! | TTTAGAAAACATAACACTCT+TGG | + | chr1_4:16136500-16136519 | None:intergenic | 25.0% |
! | TGTGTTCATAGATGATATAT+TGG | - | chr1_4:16137203-16137222 | Msa0153050:intron | 25.0% |
! | TATATTGGTGTATTCAAAGT+CGG | - | chr1_4:16137218-16137237 | Msa0153050:intron | 25.0% |
!! | AGTTGTTGAAGTATAAGTTT+TGG | - | chr1_4:16137307-16137326 | Msa0153050:intron | 25.0% |
!!! | GAGATGATTGGAATTTTTTA+AGG | - | chr1_4:16137870-16137889 | Msa0153050:intron | 25.0% |
! | TCTTGAGTTAAATTATTGTC+CGG | - | chr1_4:16137901-16137920 | Msa0153050:intron | 25.0% |
! | AGAAACTTAGAAAGTGAATT+TGG | - | chr1_4:16138105-16138124 | Msa0153050:intron | 25.0% |
! | AAAATCTTCCTCTTAAGTTT+GGG | + | chr1_4:16138238-16138257 | None:intergenic | 25.0% |
! | TAAAATCTTCCTCTTAAGTT+TGG | + | chr1_4:16138239-16138258 | None:intergenic | 25.0% |
!! | AGAATGAGCTTGTTAAAAGA+AGG | + | chr1_4:16133931-16133950 | None:intergenic | 30.0% |
TACCAATTGCTTAGATTGAA+GGG | + | chr1_4:16133962-16133981 | None:intergenic | 30.0% | |
TTACCAATTGCTTAGATTGA+AGG | + | chr1_4:16133963-16133982 | None:intergenic | 30.0% | |
CTTTATGAAAAGGGGAATTA+GGG | + | chr1_4:16134094-16134113 | None:intergenic | 30.0% | |
TCTTTATGAAAAGGGGAATT+AGG | + | chr1_4:16134095-16134114 | None:intergenic | 30.0% | |
TAAACTGAACGAAAGATCAT+GGG | + | chr1_4:16134223-16134242 | None:intergenic | 30.0% | |
!! | AATATGATACAGTGTTGCTT+AGG | - | chr1_4:16134282-16134301 | Msa0153050:CDS | 30.0% |
! | CATAACATAACTTGTGACAT+TGG | - | chr1_4:16134377-16134396 | Msa0153050:intron | 30.0% |
TTGATAGAATTTACGCTCTT+GGG | - | chr1_4:16134599-16134618 | Msa0153050:intron | 30.0% | |
AAGTCCAAGTAGAATTTCAT+AGG | + | chr1_4:16134678-16134697 | None:intergenic | 30.0% | |
!! | TATTTGCTATGAACACTTGA+AGG | - | chr1_4:16134707-16134726 | Msa0153050:CDS | 30.0% |
ACGAATCTCCATATTCATAA+TGG | - | chr1_4:16134790-16134809 | Msa0153050:intron | 30.0% | |
TGTGCTTGTGTGTTAATATT+GGG | - | chr1_4:16134867-16134886 | Msa0153050:CDS | 30.0% | |
AAAGATTTCTTAGTGAGAAG+AGG | + | chr1_4:16134978-16134997 | None:intergenic | 30.0% | |
!! | TTGTTTGAAATCCGCTATTT+TGG | - | chr1_4:16135204-16135223 | Msa0153050:intron | 30.0% |
TGTTTCCTCACAAAATTATC+TGG | + | chr1_4:16135644-16135663 | None:intergenic | 30.0% | |
! | GATAATTTTGTGAGGAAACA+TGG | - | chr1_4:16135644-16135663 | Msa0153050:intron | 30.0% |
! | TGACAACTGTATTTCTTTTG+TGG | - | chr1_4:16135739-16135758 | Msa0153050:intron | 30.0% |
! | AACTGTATTTCTTTTGTGGA+TGG | - | chr1_4:16135743-16135762 | Msa0153050:intron | 30.0% |
TTACTAGTATTCACATACGA+AGG | - | chr1_4:16135809-16135828 | Msa0153050:CDS | 30.0% | |
TCTTCAATGCCTTCAAAAAT+AGG | + | chr1_4:16135935-16135954 | None:intergenic | 30.0% | |
! | CTTCTTTCTTGAAGTTTTCT+TGG | + | chr1_4:16136095-16136114 | None:intergenic | 30.0% |
TTCAAGAAAGAAGTTGAAGA+TGG | - | chr1_4:16136102-16136121 | Msa0153050:CDS | 30.0% | |
! | ATACCTTTAATCAAGTTGTC+CGG | + | chr1_4:16136178-16136197 | None:intergenic | 30.0% |
GTTATGTCTCTTATGTTGAA+AGG | - | chr1_4:16136292-16136311 | Msa0153050:CDS | 30.0% | |
ATTCAAACAAACCAAAGATG+TGG | + | chr1_4:16136353-16136372 | None:intergenic | 30.0% | |
!! | GGATTTAATTTGTTTGCCTT+TGG | - | chr1_4:16136408-16136427 | Msa0153050:CDS | 30.0% |
ATTACATCCATTTGTTCCAA+AGG | + | chr1_4:16136427-16136446 | None:intergenic | 30.0% | |
! | TTGAACTGATTGTTGTCTTT+TGG | - | chr1_4:16136454-16136473 | Msa0153050:CDS | 30.0% |
! | GAGTGTTATGTTTTCTAAAC+TGG | - | chr1_4:16136501-16136520 | Msa0153050:CDS | 30.0% |
! | ATGTCATTTCGAAAAACATC+TGG | + | chr1_4:16136670-16136689 | None:intergenic | 30.0% |
! | TTATTGGTTAAGAAGAAGGA+TGG | - | chr1_4:16136874-16136893 | Msa0153050:intron | 30.0% |
AGAAAAAATATCCTCTTCCA+AGG | - | chr1_4:16136947-16136966 | Msa0153050:intron | 30.0% | |
AGATGATCTTATGGATCATT+TGG | - | chr1_4:16136972-16136991 | Msa0153050:intron | 30.0% | |
CAAATTGATCCAAATAAGGA+TGG | + | chr1_4:16137179-16137198 | None:intergenic | 30.0% | |
! | TCCTTATTTGGATCAATTTG+TGG | - | chr1_4:16137179-16137198 | Msa0153050:intron | 30.0% |
ACCACAAATTGATCCAAATA+AGG | + | chr1_4:16137183-16137202 | None:intergenic | 30.0% | |
! | ATACAACTTCTTTTCCTTCA+AGG | + | chr1_4:16137283-16137302 | None:intergenic | 30.0% |
!! | TAAGGGACAAGTTTTTGTTT+TGG | - | chr1_4:16137530-16137549 | Msa0153050:intron | 30.0% |
TTGGAAACTCTATTCACATT+TGG | + | chr1_4:16137559-16137578 | None:intergenic | 30.0% | |
GCATTCGACAAAATTAAAAC+TGG | + | chr1_4:16137609-16137628 | None:intergenic | 30.0% | |
TTGTGTTTGTGCTTAAAGTT+TGG | - | chr1_4:16137778-16137797 | Msa0153050:intron | 30.0% | |
ATCAAAAGGAGTTGAATATG+AGG | - | chr1_4:16137842-16137861 | Msa0153050:intron | 30.0% | |
CTTGAGTTAAATTATTGTCC+GGG | - | chr1_4:16137902-16137921 | Msa0153050:intron | 30.0% | |
! | GCAGTTCATAGATTTAAGTT+TGG | - | chr1_4:16138009-16138028 | Msa0153050:intron | 30.0% |
! | GAAGTTGACAAGTAACATTT+TGG | - | chr1_4:16138072-16138091 | Msa0153050:intron | 30.0% |
GATTAATCAAGGTAAAGAGA+AGG | - | chr1_4:16138150-16138169 | Msa0153050:intron | 30.0% | |
! | ACTTAAGAGGAAGATTTTAG+AGG | - | chr1_4:16138240-16138259 | Msa0153050:CDS | 30.0% |
!! | AGCTTGTTAAAAGAAGGACT+AGG | + | chr1_4:16133925-16133944 | None:intergenic | 35.0% |
AACCCTTCAATCTAAGCAAT+TGG | - | chr1_4:16133957-16133976 | Msa0153050:CDS | 35.0% | |
! | AACGAAAGATCATGGGTTTT+CGG | + | chr1_4:16134216-16134235 | None:intergenic | 35.0% |
CTAAACTGAACGAAAGATCA+TGG | + | chr1_4:16134224-16134243 | None:intergenic | 35.0% | |
CATGATCTTTCGTTCAGTTT+AGG | - | chr1_4:16134222-16134241 | Msa0153050:CDS | 35.0% | |
CTTGATAGAATTTACGCTCT+TGG | - | chr1_4:16134598-16134617 | Msa0153050:intron | 35.0% | |
GCTTCCTATGAAATTCTACT+TGG | - | chr1_4:16134671-16134690 | Msa0153050:CDS | 35.0% | |
GTGTGCTTGTGTGTTAATAT+TGG | - | chr1_4:16134866-16134885 | Msa0153050:CDS | 35.0% | |
GATTAAAGTTAACACACCTG+AGG | - | chr1_4:16134905-16134924 | Msa0153050:CDS | 35.0% | |
TGTAGGAATTTGAGGATTTG+CGG | + | chr1_4:16134940-16134959 | None:intergenic | 35.0% | |
TTTGCAGTTGTAGGAATTTG+AGG | + | chr1_4:16134948-16134967 | None:intergenic | 35.0% | |
! | GGTTTTTCATTTGCAGTTGT+AGG | + | chr1_4:16134957-16134976 | None:intergenic | 35.0% |
TAAGAACAAACATGCAACAC+AGG | + | chr1_4:16135091-16135110 | None:intergenic | 35.0% | |
GAAACAAACTGAAGCATAAC+AGG | + | chr1_4:16135170-16135189 | None:intergenic | 35.0% | |
!! | CTTTTTGGGAGTGAACAATT+GGG | - | chr1_4:16135341-16135360 | Msa0153050:intron | 35.0% |
!! | TTTTTGGGAGTGAACAATTG+GGG | - | chr1_4:16135342-16135361 | Msa0153050:intron | 35.0% |
! | GGATTCCAGATAATTTTGTG+AGG | - | chr1_4:16135636-16135655 | Msa0153050:intron | 35.0% |
AGTTGCGACATTTGAAAGTT+GGG | + | chr1_4:16135672-16135691 | None:intergenic | 35.0% | |
AATAGTCTATCTCAGCAGTA+CGG | + | chr1_4:16135862-16135881 | None:intergenic | 35.0% | |
ATTATTCAACAATGAGGAGC+CGG | - | chr1_4:16135879-16135898 | Msa0153050:CDS | 35.0% | |
GGATTACAGATTTGATGGAA+AGG | + | chr1_4:16135914-16135933 | None:intergenic | 35.0% | |
CAATGATTCTACTGGATGTA+TGG | - | chr1_4:16136015-16136034 | Msa0153050:CDS | 35.0% | |
! | CCTGATTTTCTTGTCTTTGT+TGG | + | chr1_4:16136069-16136088 | None:intergenic | 35.0% |
CCAACAAAGACAAGAAAATC+AGG | - | chr1_4:16136066-16136085 | Msa0153050:CDS | 35.0% | |
!! | TTTACTTTGAGTGTTGAGGA+GGG | - | chr1_4:16136145-16136164 | Msa0153050:CDS | 35.0% |
CTACATCGCCAAAATTCAAT+GGG | + | chr1_4:16136378-16136397 | None:intergenic | 35.0% | |
TCTACATCGCCAAAATTCAA+TGG | + | chr1_4:16136379-16136398 | None:intergenic | 35.0% | |
!! | TGGCGATGTAGATTTTAAGA+TGG | - | chr1_4:16136387-16136406 | Msa0153050:CDS | 35.0% |
!! | TTGTTTGCCTTTGGAACAAA+TGG | - | chr1_4:16136417-16136436 | Msa0153050:CDS | 35.0% |
TGAAGGTAAGTTCTTAACTG+TGG | - | chr1_4:16136534-16136553 | Msa0153050:CDS | 35.0% | |
GAAGGTAAGTTCTTAACTGT+GGG | - | chr1_4:16136535-16136554 | Msa0153050:CDS | 35.0% | |
AAGGTAAGTTCTTAACTGTG+GGG | - | chr1_4:16136536-16136555 | Msa0153050:CDS | 35.0% | |
TGTGATGTTTGCTTCATTGA+AGG | - | chr1_4:16136597-16136616 | Msa0153050:intron | 35.0% | |
ATTGAAGGTTGAAAGTGAGA+CGG | - | chr1_4:16136612-16136631 | Msa0153050:intron | 35.0% | |
ACCATATCAGATGTTTGCAT+CGG | - | chr1_4:16136765-16136784 | Msa0153050:intron | 35.0% | |
!! | GGTGTTATTGGTTAAGAAGA+AGG | - | chr1_4:16136870-16136889 | Msa0153050:intron | 35.0% |
GGATTATCGACAACTGAATA+AGG | - | chr1_4:16136915-16136934 | Msa0153050:intron | 35.0% | |
TCCAAGGATAGATGATCTTA+TGG | - | chr1_4:16136963-16136982 | Msa0153050:intron | 35.0% | |
TCCATAAGATCATCTATCCT+TGG | + | chr1_4:16136967-16136986 | None:intergenic | 35.0% | |
GAGTATTATGTGATGTCGTT+TGG | - | chr1_4:16137105-16137124 | Msa0153050:CDS | 35.0% | |
TAATGCACCAGGTGTATTTA+TGG | - | chr1_4:16137134-16137153 | Msa0153050:CDS | 35.0% | |
ATGTACTCCATAAATACACC+TGG | + | chr1_4:16137144-16137163 | None:intergenic | 35.0% | |
CTCTCGATATCACATAATCA+AGG | + | chr1_4:16137350-16137369 | None:intergenic | 35.0% | |
CTTGATTATGTGATATCGAG+AGG | - | chr1_4:16137348-16137367 | Msa0153050:intron | 35.0% | |
AATATGAGTCAATCCGTCTA+AGG | - | chr1_4:16137374-16137393 | Msa0153050:intron | 35.0% | |
! | GATCCGTAATTTTCTTGCTT+TGG | - | chr1_4:16137440-16137459 | Msa0153050:intron | 35.0% |
CCACCAAAGCAAGAAAATTA+CGG | + | chr1_4:16137446-16137465 | None:intergenic | 35.0% | |
! | CGTAATTTTCTTGCTTTGGT+GGG | - | chr1_4:16137444-16137463 | Msa0153050:intron | 35.0% |
AAAATCCTTCTATGAACCTC+CGG | + | chr1_4:16137476-16137495 | None:intergenic | 35.0% | |
! | TATGTAGAATGGTCAAGTTG+TGG | - | chr1_4:16137686-16137705 | Msa0153050:intron | 35.0% |
GTTAAATTATTGTCCGGGTA+AGG | - | chr1_4:16137907-16137926 | Msa0153050:intron | 35.0% | |
TAAGAAGTCGTTGCATATGT+CGG | - | chr1_4:16137955-16137974 | Msa0153050:intron | 35.0% | |
! | GTTGACAAGTAACATTTTGG+AGG | - | chr1_4:16138075-16138094 | Msa0153050:intron | 35.0% |
! | GAAAGTGAATTTGGAACTAG+TGG | - | chr1_4:16138114-16138133 | Msa0153050:intron | 35.0% |
!! | CGTTTGGTGTTGATTAATCA+AGG | - | chr1_4:16138139-16138158 | Msa0153050:intron | 35.0% |
! | TAAAGAGAAGGACTTTAGAG+TGG | - | chr1_4:16138162-16138181 | Msa0153050:intron | 35.0% |
CTCTTAAGTTTGGGTAAATC+TGG | + | chr1_4:16138229-16138248 | None:intergenic | 35.0% | |
CAGATTTACCCAAACTTAAG+AGG | - | chr1_4:16138227-16138246 | Msa0153050:CDS | 35.0% | |
TGCTTAGATTGAAGGGTTGT+TGG | + | chr1_4:16133955-16133974 | None:intergenic | 40.0% | |
! | ACGAAAGATCATGGGTTTTC+GGG | + | chr1_4:16134215-16134234 | None:intergenic | 40.0% |
TTAATATTGGGCCGAGTACA+TGG | - | chr1_4:16134879-16134898 | Msa0153050:CDS | 40.0% | |
CTTTAATCGAGCCATGTACT+CGG | + | chr1_4:16134893-16134912 | None:intergenic | 40.0% | |
GATCACAAGGCATGAAGAAA+GGG | + | chr1_4:16135018-16135037 | None:intergenic | 40.0% | |
CTTTCTTCATGCCTTGTGAT+CGG | - | chr1_4:16135017-16135036 | Msa0153050:intron | 40.0% | |
TTCTTATGCATGTTGCCTTG+CGG | - | chr1_4:16135105-16135124 | Msa0153050:intron | 40.0% | |
CAGAATTGTGCACAACATCA+CGG | + | chr1_4:16135145-16135164 | None:intergenic | 40.0% | |
!! | GCTTTTTGGGAGTGAACAAT+TGG | - | chr1_4:16135340-16135359 | Msa0153050:intron | 40.0% |
GAACAATTGGGGTCATACTT+AGG | - | chr1_4:16135353-16135372 | Msa0153050:intron | 40.0% | |
GAATGAGTCAGAATCCAAAG+AGG | + | chr1_4:16135534-16135553 | None:intergenic | 40.0% | |
CAGTTGCGACATTTGAAAGT+TGG | + | chr1_4:16135673-16135692 | None:intergenic | 40.0% | |
! | GTATTTCTTTTGTGGATGGC+TGG | - | chr1_4:16135747-16135766 | Msa0153050:intron | 40.0% |
GAACGCTACTCAATTGACAT+TGG | - | chr1_4:16135782-16135801 | Msa0153050:CDS | 40.0% | |
TTATTCAACAATGAGGAGCC+GGG | - | chr1_4:16135880-16135899 | Msa0153050:CDS | 40.0% | |
!! | TATCGACTCCTTTGATTTCC+TGG | - | chr1_4:16135955-16135974 | Msa0153050:CDS | 40.0% |
TGCTGAATCCAGGAAATCAA+AGG | + | chr1_4:16135966-16135985 | None:intergenic | 40.0% | |
TTGCAAGGCAATGATTCTAC+TGG | - | chr1_4:16136007-16136026 | Msa0153050:CDS | 40.0% | |
TATGGATCAACTGATACCAG+CGG | - | chr1_4:16136033-16136052 | Msa0153050:CDS | 40.0% | |
! | GGTGTTTACTTTGAGTGTTG+AGG | - | chr1_4:16136141-16136160 | Msa0153050:CDS | 40.0% |
!! | GTTTACTTTGAGTGTTGAGG+AGG | - | chr1_4:16136144-16136163 | Msa0153050:CDS | 40.0% |
GTCTCTTATGTTGAAAGGGA+TGG | - | chr1_4:16136297-16136316 | Msa0153050:CDS | 40.0% | |
GTTCTTAACTGTGGGGTAAT+TGG | - | chr1_4:16136543-16136562 | Msa0153050:CDS | 40.0% | |
TTGAAGGTTGAAAGTGAGAC+GGG | - | chr1_4:16136613-16136632 | Msa0153050:intron | 40.0% | |
TCTGGAAACTCATTCACTAC+CGG | + | chr1_4:16136652-16136671 | None:intergenic | 40.0% | |
!! | TGATATGGTGTCGTTGATAC+AGG | + | chr1_4:16136754-16136773 | None:intergenic | 40.0% |
TCCGATGCAAACATCTGATA+TGG | + | chr1_4:16136769-16136788 | None:intergenic | 40.0% | |
CAGATGTTTGCATCGGAATT+AGG | - | chr1_4:16136772-16136791 | Msa0153050:intron | 40.0% | |
! | AGGTGAGTTGAAGAAGTAGT+TGG | - | chr1_4:16136792-16136811 | Msa0153050:intron | 40.0% |
! | TGAGTTGAAGAAGTAGTTGG+AGG | - | chr1_4:16136795-16136814 | Msa0153050:intron | 40.0% |
GAAGTAGTTGGAGGAATTGT+TGG | - | chr1_4:16136804-16136823 | Msa0153050:intron | 40.0% | |
AGATCATCTATCCTTGGAAG+AGG | + | chr1_4:16136961-16136980 | None:intergenic | 40.0% | |
!!! | CTTTTGACTTCACTCGTATC+TGG | + | chr1_4:16137044-16137063 | None:intergenic | 40.0% |
CTAGTTCAGAATGCAGTCTT+CGG | + | chr1_4:16137072-16137091 | None:intergenic | 40.0% | |
ATTGGTGTATTCAAAGTCGG+AGG | - | chr1_4:16137221-16137240 | Msa0153050:intron | 40.0% | |
! | ACTTCTTTTCCTTCAAGGTC+TGG | + | chr1_4:16137278-16137297 | None:intergenic | 40.0% |
GATTATGTGATATCGAGAGG+TGG | - | chr1_4:16137351-16137370 | Msa0153050:intron | 40.0% | |
AACACCACATCAACCTTAGA+CGG | + | chr1_4:16137390-16137409 | None:intergenic | 40.0% | |
! | CGGATCTTAGAAACTGACTT+GGG | + | chr1_4:16137426-16137445 | None:intergenic | 40.0% |
ACGGATCTTAGAAACTGACT+TGG | + | chr1_4:16137427-16137446 | None:intergenic | 40.0% | |
! | CCGTAATTTTCTTGCTTTGG+TGG | - | chr1_4:16137443-16137462 | Msa0153050:intron | 40.0% |
TTACGAGTCAACAACGTCAA+AGG | + | chr1_4:16137513-16137532 | None:intergenic | 40.0% | |
!! | TTTGACGTTGTTGACTCGTA+AGG | - | chr1_4:16137512-16137531 | Msa0153050:intron | 40.0% |
!! | TTGACGTTGTTGACTCGTAA+GGG | - | chr1_4:16137513-16137532 | Msa0153050:intron | 40.0% |
GTTTCCAAGAGTTGAAGAAG+AGG | - | chr1_4:16137571-16137590 | Msa0153050:intron | 40.0% | |
TCAACCTCTTCTTCAACTCT+TGG | + | chr1_4:16137578-16137597 | None:intergenic | 40.0% | |
TTGTGTATTGTGATGCGTCT+TGG | - | chr1_4:16137643-16137662 | Msa0153050:intron | 40.0% | |
TATTGTGATGCGTCTTGGAT+GGG | - | chr1_4:16137648-16137667 | Msa0153050:intron | 40.0% | |
! | GGTAGAGTGCTTATGTAGAA+TGG | - | chr1_4:16137675-16137694 | Msa0153050:intron | 40.0% |
GTATGCTTCATGGCAGTTAA+AGG | - | chr1_4:16137710-16137729 | Msa0153050:intron | 40.0% | |
GGCAGTTAAAGGTTCATGAA+AGG | - | chr1_4:16137721-16137740 | Msa0153050:intron | 40.0% | |
!! | GTTTGGAAGCACTAGTTGTA+TGG | - | chr1_4:16137795-16137814 | Msa0153050:intron | 40.0% |
AGGAGTTGAATATGAGGCAA+AGG | - | chr1_4:16137848-16137867 | Msa0153050:intron | 40.0% | |
TATGAGGCAAAGGAGATGAT+TGG | - | chr1_4:16137858-16137877 | Msa0153050:intron | 40.0% | |
TATGTCGGCACTTATGGTAA+AGG | - | chr1_4:16137970-16137989 | Msa0153050:intron | 40.0% | |
GGCACTTATGGTAAAGGAAT+TGG | - | chr1_4:16137976-16137995 | Msa0153050:intron | 40.0% | |
ATTCCTAATTTCACGCCACT+AGG | + | chr1_4:16138049-16138068 | None:intergenic | 40.0% | |
! | TTTGGAACTAGTGGATCGTT+TGG | - | chr1_4:16138123-16138142 | Msa0153050:intron | 40.0% |
!! | GACTTTAGAGTGGATGAGAA+TGG | - | chr1_4:16138172-16138191 | Msa0153050:intron | 40.0% |
GTTAACACACCTGAGGTAAG+AGG | - | chr1_4:16134912-16134931 | Msa0153050:CDS | 45.0% | |
CGATCACAAGGCATGAAGAA+AGG | + | chr1_4:16135019-16135038 | None:intergenic | 45.0% | |
GAAGAAAGGATCCGATCACA+AGG | + | chr1_4:16135031-16135050 | None:intergenic | 45.0% | |
!! | AGTTTCTAGAGCAAGGCAGA+AGG | + | chr1_4:16135066-16135085 | None:intergenic | 45.0% |
!! | ACAGGTGAGTTTCTAGAGCA+AGG | + | chr1_4:16135073-16135092 | None:intergenic | 45.0% |
AACCATGTGCGCCAAAATAG+CGG | + | chr1_4:16135218-16135237 | None:intergenic | 45.0% | |
! | CTGGCGTCTAGGATTGAAAA+AGG | - | chr1_4:16135715-16135734 | Msa0153050:intron | 45.0% |
AATGCTCCAGTAGGGTTTGA+AGG | + | chr1_4:16135989-16136008 | None:intergenic | 45.0% | |
TGTTGGATATGATTCTCCGC+TGG | + | chr1_4:16136052-16136071 | None:intergenic | 45.0% | |
GATGGAGAAGTCTCATGTGA+AGG | - | chr1_4:16136120-16136139 | Msa0153050:CDS | 45.0% | |
GAGCCGGACAACTTGATTAA+AGG | - | chr1_4:16136172-16136191 | Msa0153050:CDS | 45.0% | |
! | AAACTGGATGAGCGAGTTGA+AGG | - | chr1_4:16136517-16136536 | Msa0153050:CDS | 45.0% |
CTTAACTGTGGGGTAATTGG+AGG | - | chr1_4:16136546-16136565 | Msa0153050:CDS | 45.0% | |
AACTCCACTTCTCTCTCAAG+CGG | + | chr1_4:16136703-16136722 | None:intergenic | 45.0% | |
CGATGAAACACTAGGCTTGA+TGG | + | chr1_4:16136839-16136858 | None:intergenic | 45.0% | |
TCAAGCCTAGTGTTTCATCG+TGG | - | chr1_4:16136839-16136858 | Msa0153050:intron | 45.0% | |
CAAGCCTAGTGTTTCATCGT+GGG | - | chr1_4:16136840-16136859 | Msa0153050:intron | 45.0% | |
AAGCCTAGTGTTTCATCGTG+GGG | - | chr1_4:16136841-16136860 | Msa0153050:intron | 45.0% | |
! | AGAAGAAGGATGGTAGTGTG+CGG | - | chr1_4:16136884-16136903 | Msa0153050:intron | 45.0% |
! | TCACTCGTATCTGGTGATGT+CGG | + | chr1_4:16137035-16137054 | None:intergenic | 45.0% |
CGAAGACTGCATTCTGAACT+AGG | - | chr1_4:16137070-16137089 | Msa0153050:CDS | 45.0% | |
! | TTTGGTGTGACTAATGCACC+AGG | - | chr1_4:16137123-16137142 | Msa0153050:CDS | 45.0% |
GATTGTGTTCCAGACCTTGA+AGG | - | chr1_4:16137266-16137285 | Msa0153050:intron | 45.0% | |
!! | CAATCCGTCTAAGGTTGATG+TGG | - | chr1_4:16137383-16137402 | Msa0153050:intron | 45.0% |
!! | TTGCTTTGGTGGGTTATTGC+CGG | - | chr1_4:16137454-16137473 | Msa0153050:intron | 45.0% |
TATTGCCGGAGGTTCATAGA+AGG | - | chr1_4:16137468-16137487 | Msa0153050:intron | 45.0% | |
GTATTGTGATGCGTCTTGGA+TGG | - | chr1_4:16137647-16137666 | Msa0153050:intron | 45.0% | |
AAGTTGTGGCGTATGCTTCA+TGG | - | chr1_4:16137700-16137719 | Msa0153050:intron | 45.0% | |
GAATTACCCGACCCATGATT+TGG | - | chr1_4:16137743-16137762 | Msa0153050:intron | 45.0% | |
CCAATTCCAAATCATGGGTC+GGG | + | chr1_4:16137752-16137771 | None:intergenic | 45.0% | |
GCCAATTCCAAATCATGGGT+CGG | + | chr1_4:16137753-16137772 | None:intergenic | 45.0% | |
! | GACCCATGATTTGGAATTGG+CGG | - | chr1_4:16137752-16137771 | Msa0153050:intron | 45.0% |
TGCCGCCAATTCCAAATCAT+GGG | + | chr1_4:16137757-16137776 | None:intergenic | 45.0% | |
CAACGCATATGTTACCACAC+TGG | + | chr1_4:16137933-16137952 | None:intergenic | 45.0% | |
GTTGCATATGTCGGCACTTA+TGG | - | chr1_4:16137964-16137983 | Msa0153050:intron | 45.0% | |
ACACCTAGTGGCGTGAAATT+AGG | - | chr1_4:16138043-16138062 | Msa0153050:intron | 45.0% | |
!! | TATTTAAACTTAAATTAATA+AGG | + | chr1_4:16135418-16135437 | None:intergenic | 5.0% |
AAGGCAGAAGGATCCAGTCA+CGG | + | chr1_4:16135054-16135073 | None:intergenic | 50.0% | |
ACATCACGGCCAAGGATTTC+TGG | + | chr1_4:16135131-16135150 | None:intergenic | 50.0% | |
!!! | ATCCGCTATTTTGGCGCACA+TGG | - | chr1_4:16135213-16135232 | Msa0153050:intron | 50.0% |
!! | GGTTTGAAGGTGCTGAATCC+AGG | + | chr1_4:16135976-16135995 | None:intergenic | 50.0% |
TCAGCACCTTCAAACCCTAC+TGG | - | chr1_4:16135980-16135999 | Msa0153050:CDS | 50.0% | |
!! | AACCCTACTGGAGCATTGCA+AGG | - | chr1_4:16135992-16136011 | Msa0153050:CDS | 50.0% |
TGCCTTGCAATGCTCCAGTA+GGG | + | chr1_4:16135997-16136016 | None:intergenic | 50.0% | |
TTGCCTTGCAATGCTCCAGT+AGG | + | chr1_4:16135998-16136017 | None:intergenic | 50.0% | |
!! | GGGTAATTGGAGGCATCGTT+GGG | - | chr1_4:16136556-16136575 | Msa0153050:intron | 50.0% |
ATCGTTGGGTGAAGAAGCTC+AGG | - | chr1_4:16136570-16136589 | Msa0153050:intron | 50.0% | |
GTTGAAAGTGAGACGGGAGT+TGG | - | chr1_4:16136619-16136638 | Msa0153050:intron | 50.0% | |
!!! | GACGGGAGTTGGTGATTTTC+CGG | - | chr1_4:16136630-16136649 | Msa0153050:intron | 50.0% |
CTTACCGCTTGAGAGAGAAG+TGG | - | chr1_4:16136696-16136715 | Msa0153050:intron | 50.0% | |
! | CACTCGTATCTGGTGATGTC+GGG | + | chr1_4:16137034-16137053 | None:intergenic | 50.0% |
GGTGTATTCAAAGTCGGAGG+AGG | - | chr1_4:16137224-16137243 | Msa0153050:intron | 50.0% | |
!! | AGGAGCATGCGGAGCATTTT+AGG | - | chr1_4:16137244-16137263 | Msa0153050:intron | 50.0% |
!! | AGGTTGATGTGGTGTTGCAG+TGG | - | chr1_4:16137394-16137413 | Msa0153050:intron | 50.0% |
TGATGCGTCTTGGATGGGAT+TGG | - | chr1_4:16137653-16137672 | Msa0153050:intron | 50.0% | |
GATGCGTCTTGGATGGGATT+GGG | - | chr1_4:16137654-16137673 | Msa0153050:intron | 50.0% | |
! | CCCGACCCATGATTTGGAAT+TGG | - | chr1_4:16137749-16137768 | Msa0153050:intron | 50.0% |
CTGCCGCCAATTCCAAATCA+TGG | + | chr1_4:16137758-16137777 | None:intergenic | 50.0% | |
TTTGCGGCTCCTCTTACCTC+AGG | + | chr1_4:16134924-16134943 | None:intergenic | 55.0% | |
GGATCCTTTCTTCCCGTGAC+TGG | - | chr1_4:16135038-16135057 | Msa0153050:intron | 55.0% | |
GGATCCAGTCACGGGAAGAA+AGG | + | chr1_4:16135045-16135064 | None:intergenic | 55.0% | |
AGGCAGAAGGATCCAGTCAC+GGG | + | chr1_4:16135053-16135072 | None:intergenic | 55.0% | |
TGTGCACAACATCACGGCCA+AGG | + | chr1_4:16135139-16135158 | None:intergenic | 55.0% | |
GTCGCAACTGTCACTGTTCC+TGG | - | chr1_4:16135683-16135702 | Msa0153050:intron | 55.0% | |
GCAACTGTCACTGTTCCTGG+CGG | - | chr1_4:16135686-16135705 | Msa0153050:intron | 55.0% | |
! | ACAATGAGGAGCCGGGTTGA+AGG | - | chr1_4:16135887-16135906 | Msa0153050:CDS | 55.0% |
! | CAATGAGGAGCCGGGTTGAA+GGG | - | chr1_4:16135888-16135907 | Msa0153050:CDS | 55.0% |
GATGGAAAGGCCCTTCAACC+CGG | + | chr1_4:16135901-16135920 | None:intergenic | 55.0% | |
GTCATTGACACCCCAGCCAA+TGG | - | chr1_4:16136319-16136338 | Msa0153050:CDS | 55.0% | |
AGATGTGGTCACCGAGCCAT+TGG | + | chr1_4:16136338-16136357 | None:intergenic | 55.0% | |
!! | TGGCTCGGTGACCACATCTT+TGG | - | chr1_4:16136339-16136358 | Msa0153050:CDS | 55.0% |
!! | GGGGTAATTGGAGGCATCGT+TGG | - | chr1_4:16136555-16136574 | Msa0153050:intron | 55.0% |
GCTCCCCACGATGAAACACT+AGG | + | chr1_4:16136847-16136866 | None:intergenic | 55.0% | |
! | TGTTTCATCGTGGGGAGCGT+TGG | - | chr1_4:16136849-16136868 | Msa0153050:intron | 55.0% |
!! | GTGGGGAGCGTTGGTGTTAT+TGG | - | chr1_4:16136858-16136877 | Msa0153050:intron | 55.0% |
! | TGGTAGTGTGCGGTTGTGTG+TGG | - | chr1_4:16136894-16136913 | Msa0153050:intron | 55.0% |
! | AAAGTCGGAGGAGGAGCATG+CGG | - | chr1_4:16137233-16137252 | Msa0153050:intron | 55.0% |
!! | TGATGTGGTGTTGCAGTGGC+AGG | - | chr1_4:16137398-16137417 | Msa0153050:intron | 55.0% |
!! | CTTTGGTGGGTTATTGCCGG+AGG | - | chr1_4:16137457-16137476 | Msa0153050:intron | 55.0% |
!! | GTTACCACACTGGCCTTACC+CGG | + | chr1_4:16137923-16137942 | None:intergenic | 55.0% |
! | GTGAGCGAGTTGACACCTAG+TGG | - | chr1_4:16138031-16138050 | Msa0153050:intron | 55.0% |
GCCTTGCGGCCAGAAATCCT+TGG | - | chr1_4:16135119-16135138 | Msa0153050:intron | 60.0% | |
!! | GCCAAGGATTTCTGGCCGCA+AGG | + | chr1_4:16135123-16135142 | None:intergenic | 60.0% |
! | TGTTGAGGAGGGTGCAGAGC+CGG | - | chr1_4:16136156-16136175 | Msa0153050:CDS | 60.0% |
TGACACCCCAGCCAATGGCT+CGG | - | chr1_4:16136324-16136343 | Msa0153050:CDS | 60.0% | |
! | TGGTCACCGAGCCATTGGCT+GGG | + | chr1_4:16136333-16136352 | None:intergenic | 60.0% |
TTGTCCGGGTAAGGCCAGTG+TGG | - | chr1_4:16137916-16137935 | Msa0153050:intron | 60.0% | |
CTGTTCCTGGCGGCACAGTC+TGG | - | chr1_4:16135696-16135715 | Msa0153050:intron | 65.0% | |
! | GGTCACCGAGCCATTGGCTG+GGG | + | chr1_4:16136332-16136351 | None:intergenic | 65.0% |
GTGGTCACCGAGCCATTGGC+TGG | + | chr1_4:16136334-16136353 | None:intergenic | 65.0% | |
AGACGCCAGACTGTGCCGCC+AGG | + | chr1_4:16135704-16135723 | None:intergenic | 70.0% | |
GGCGGCACAGTCTGGCGTCT+AGG | - | chr1_4:16135704-16135723 | Msa0153050:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 16133919 | 16138282 | 16133919 | ID=Msa0153050;Name=Msa0153050 |
chr1_4 | mRNA | 16133919 | 16138282 | 16133919 | ID=Msa0153050-mRNA-1;Parent=Msa0153050;Name=Msa0153050-mRNA-1;_AED=0.82;_eAED=0.82;_QI=0|0|0|0.11|1|1|9|0|634 |
chr1_4 | exon | 16138223 | 16138282 | 16138223 | ID=Msa0153050-mRNA-1:exon:6227;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16137032 | 16137190 | 16137032 | ID=Msa0153050-mRNA-1:exon:6226;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16135760 | 16136566 | 16135760 | ID=Msa0153050-mRNA-1:exon:6225;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16135408 | 16135633 | 16135408 | ID=Msa0153050-mRNA-1:exon:6224;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16134863 | 16134987 | 16134863 | ID=Msa0153050-mRNA-1:exon:6223;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16134662 | 16134787 | 16134662 | ID=Msa0153050-mRNA-1:exon:6222;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16134420 | 16134508 | 16134420 | ID=Msa0153050-mRNA-1:exon:6221;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16134119 | 16134309 | 16134119 | ID=Msa0153050-mRNA-1:exon:6220;Parent=Msa0153050-mRNA-1 |
chr1_4 | exon | 16133919 | 16134040 | 16133919 | ID=Msa0153050-mRNA-1:exon:6219;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16138223 | 16138282 | 16138223 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16137032 | 16137190 | 16137032 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16135760 | 16136566 | 16135760 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16135408 | 16135633 | 16135408 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16134863 | 16134987 | 16134863 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16134662 | 16134787 | 16134662 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16134420 | 16134508 | 16134420 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16134119 | 16134309 | 16134119 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
chr1_4 | CDS | 16133919 | 16134040 | 16133919 | ID=Msa0153050-mRNA-1:cds;Parent=Msa0153050-mRNA-1 |
Gene Sequence |
Protein sequence |