Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153550 | XP_003630166.2 | 73.779 | 389 | 21 | 5 | 48 | 356 | 56 | 443 | 5.85e-179 | 551 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153550 | sp|Q9SJ20|RIR1_ARATH | 66.495 | 388 | 51 | 4 | 48 | 356 | 56 | 443 | 2.70e-165 | 508 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153550 | G7LC83 | 73.779 | 389 | 21 | 5 | 48 | 356 | 56 | 443 | 2.80e-179 | 551 |
Gene ID | Type | Classification |
---|---|---|
Msa0153550 | TF | B3 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153550 | MtrunA17_Chr8g0383631 | 73.779 | 389 | 21 | 5 | 48 | 356 | 56 | 443 | 0.0 | 551 |
Msa0153550 | MtrunA17_Chr3g0079701 | 73.475 | 377 | 32 | 4 | 48 | 356 | 56 | 432 | 1.21e-178 | 540 |
Msa0153550 | MtrunA17_Chr6g0476171 | 61.404 | 285 | 58 | 6 | 696 | 969 | 2 | 245 | 1.70e-106 | 331 |
Msa0153550 | MtrunA17_Chr6g0476171 | 71.242 | 153 | 40 | 2 | 516 | 665 | 2 | 153 | 9.56e-61 | 207 |
Msa0153550 | MtrunA17_Chr1g0163141 | 86.145 | 166 | 22 | 1 | 350 | 515 | 4 | 168 | 2.01e-88 | 281 |
Msa0153550 | MtrunA17_Chr6g0476181 | 76.250 | 160 | 30 | 1 | 356 | 515 | 1 | 152 | 4.73e-75 | 243 |
Msa0153550 | MtrunA17_Chr1g0163131 | 42.951 | 305 | 129 | 10 | 356 | 646 | 33 | 306 | 2.43e-62 | 214 |
Msa0153550 | MtrunA17_Chr1g0163131 | 47.945 | 73 | 36 | 1 | 893 | 965 | 232 | 302 | 4.44e-13 | 71.2 |
Msa0153550 | MtrunA17_Chr1g0163101 | 61.963 | 163 | 40 | 2 | 353 | 515 | 29 | 169 | 1.71e-59 | 201 |
Msa0153550 | MtrunA17_Chr1g0162161 | 63.125 | 160 | 39 | 2 | 356 | 515 | 3 | 142 | 2.44e-59 | 200 |
Msa0153550 | MtrunA17_Chr1g0163181 | 29.630 | 486 | 252 | 17 | 357 | 828 | 21 | 430 | 1.51e-52 | 191 |
Msa0153550 | MtrunA17_Chr1g0163181 | 32.372 | 312 | 172 | 13 | 681 | 969 | 134 | 429 | 1.05e-33 | 135 |
Msa0153550 | MtrunA17_Chr1g0163261 | 39.172 | 314 | 145 | 12 | 357 | 662 | 25 | 300 | 4.24e-50 | 179 |
Msa0153550 | MtrunA17_Chr1g0163261 | 42.657 | 143 | 74 | 6 | 700 | 839 | 157 | 294 | 1.05e-21 | 97.1 |
Msa0153550 | MtrunA17_Chr1g0163081 | 58.861 | 158 | 40 | 3 | 356 | 513 | 5 | 137 | 3.70e-49 | 171 |
Msa0153550 | MtrunA17_Chr1g0163251 | 38.689 | 305 | 152 | 10 | 357 | 659 | 21 | 292 | 5.94e-49 | 179 |
Msa0153550 | MtrunA17_Chr1g0163251 | 35.885 | 209 | 104 | 9 | 657 | 839 | 87 | 291 | 1.27e-20 | 95.5 |
Msa0153550 | MtrunA17_Chr1g0163161 | 59.864 | 147 | 39 | 3 | 369 | 515 | 1 | 127 | 8.05e-48 | 166 |
Msa0153550 | MtrunA17_Chr1g0163121 | 56.250 | 160 | 39 | 3 | 356 | 515 | 10 | 138 | 6.20e-47 | 164 |
Msa0153550 | MtrunA17_Chr1g0163231 | 38.225 | 293 | 137 | 9 | 357 | 645 | 25 | 277 | 1.59e-46 | 169 |
Msa0153550 | MtrunA17_Chr1g0163231 | 32.632 | 190 | 105 | 7 | 657 | 826 | 91 | 277 | 4.27e-14 | 74.3 |
Msa0153550 | MtrunA17_Chr1g0163201 | 32.012 | 328 | 167 | 10 | 346 | 657 | 8 | 295 | 1.55e-38 | 149 |
Msa0153550 | MtrunA17_Chr1g0163201 | 32.166 | 314 | 155 | 12 | 687 | 987 | 135 | 403 | 4.03e-32 | 130 |
Msa0153550 | MtrunA17_Chr1g0163111 | 36.992 | 246 | 125 | 11 | 725 | 969 | 12 | 228 | 7.74e-38 | 141 |
Msa0153550 | MtrunA17_Chr1g0163111 | 27.875 | 287 | 139 | 9 | 545 | 830 | 12 | 231 | 6.74e-24 | 101 |
Msa0153550 | MtrunA17_Chr1g0171611 | 33.904 | 292 | 139 | 9 | 357 | 645 | 25 | 265 | 8.37e-37 | 140 |
Msa0153550 | MtrunA17_Chr1g0171611 | 43.269 | 104 | 55 | 3 | 725 | 826 | 164 | 265 | 8.76e-14 | 73.2 |
Msa0153550 | MtrunA17_Chr1g0208771 | 26.305 | 479 | 311 | 17 | 357 | 827 | 13 | 457 | 1.75e-34 | 138 |
Msa0153550 | MtrunA17_Chr1g0208771 | 21.888 | 466 | 277 | 15 | 567 | 965 | 13 | 458 | 1.41e-13 | 74.3 |
Msa0153550 | MtrunA17_Chr1g0163151 | 33.203 | 256 | 121 | 7 | 720 | 969 | 10 | 221 | 2.04e-32 | 125 |
Msa0153550 | MtrunA17_Chr1g0163151 | 39.535 | 129 | 68 | 4 | 524 | 652 | 1 | 119 | 1.76e-16 | 79.7 |
Msa0153550 | MtrunA17_Chr7g0233561 | 31.000 | 300 | 181 | 6 | 357 | 649 | 34 | 314 | 5.06e-29 | 119 |
Msa0153550 | MtrunA17_Chr3g0131891 | 31.353 | 303 | 168 | 11 | 356 | 649 | 34 | 305 | 4.27e-28 | 116 |
Msa0153550 | MtrunA17_Chr7g0233531 | 30.667 | 300 | 167 | 8 | 356 | 649 | 1 | 265 | 2.84e-27 | 112 |
Msa0153550 | MtrunA17_Chr1g0162151 | 47.826 | 115 | 57 | 3 | 548 | 662 | 23 | 134 | 1.41e-26 | 108 |
Msa0153550 | MtrunA17_Chr1g0162151 | 48.214 | 112 | 54 | 4 | 728 | 839 | 23 | 130 | 3.00e-24 | 102 |
Msa0153550 | MtrunA17_Chr1g0163091 | 45.390 | 141 | 64 | 6 | 524 | 660 | 1 | 132 | 2.17e-26 | 106 |
Msa0153550 | MtrunA17_Chr1g0163091 | 45.255 | 137 | 64 | 6 | 704 | 839 | 4 | 130 | 2.72e-24 | 100 |
Msa0153550 | MtrunA17_Chr7g0233541 | 28.333 | 300 | 191 | 6 | 356 | 649 | 1 | 282 | 5.75e-26 | 109 |
Msa0153550 | MtrunA17_Chr4g0067431 | 26.837 | 313 | 200 | 11 | 357 | 659 | 31 | 324 | 7.79e-26 | 109 |
Msa0153550 | MtrunA17_Chr8g0390841 | 23.633 | 512 | 307 | 17 | 354 | 827 | 52 | 517 | 6.75e-25 | 110 |
Msa0153550 | MtrunA17_Chr3g0103171 | 30.241 | 291 | 165 | 12 | 357 | 643 | 6 | 262 | 2.81e-24 | 103 |
Msa0153550 | MtrunA17_Chr1g0163221 | 27.500 | 320 | 196 | 9 | 345 | 659 | 15 | 303 | 3.61e-23 | 102 |
Msa0153550 | MtrunA17_Chr7g0233521 | 28.247 | 308 | 164 | 9 | 356 | 649 | 1 | 265 | 6.41e-23 | 100 |
Msa0153550 | MtrunA17_Chr1g0163071 | 25.161 | 310 | 215 | 7 | 356 | 659 | 1 | 299 | 2.23e-22 | 99.0 |
Msa0153550 | MtrunA17_Chr1g0163241 | 40.146 | 137 | 77 | 3 | 357 | 491 | 23 | 156 | 4.23e-22 | 94.4 |
Msa0153550 | MtrunA17_Chr3g0103181 | 28.179 | 291 | 165 | 12 | 357 | 643 | 26 | 276 | 1.32e-18 | 87.4 |
Msa0153550 | MtrunA17_Chr5g0419201 | 33.571 | 140 | 89 | 3 | 337 | 472 | 12 | 151 | 1.26e-17 | 82.0 |
Msa0153550 | MtrunA17_Chr1g0163191 | 40.404 | 99 | 57 | 2 | 357 | 453 | 21 | 119 | 1.46e-17 | 81.3 |
Msa0153550 | MtrunA17_Chr7g0233571 | 31.579 | 209 | 124 | 7 | 356 | 561 | 25 | 217 | 1.95e-16 | 79.7 |
Msa0153550 | MtrunA17_Chr3g0103191 | 31.019 | 216 | 113 | 10 | 357 | 568 | 26 | 209 | 6.89e-16 | 78.6 |
Msa0153550 | MtrunA17_Chr3g0103151 | 36.885 | 122 | 66 | 4 | 357 | 475 | 26 | 139 | 2.11e-15 | 74.7 |
Msa0153550 | MtrunA17_Chr5g0419211 | 37.234 | 94 | 58 | 1 | 567 | 660 | 11 | 103 | 2.27e-14 | 70.5 |
Msa0153550 | MtrunA17_Chr5g0419211 | 37.500 | 96 | 54 | 2 | 746 | 839 | 10 | 101 | 7.34e-14 | 68.9 |
Msa0153550 | MtrunA17_Chr3g0103201 | 29.084 | 251 | 134 | 13 | 399 | 643 | 5 | 217 | 2.63e-13 | 70.5 |
Msa0153550 | MtrunA17_Chr1g0154111 | 23.226 | 310 | 200 | 11 | 357 | 633 | 42 | 346 | 1.94e-12 | 71.2 |
Msa0153550 | MtrunA17_Chr1g0163061 | 35.833 | 120 | 59 | 4 | 326 | 436 | 4 | 114 | 5.87e-12 | 67.4 |
Msa0153550 | MtrunA17_Chr1g0154131 | 25.763 | 295 | 165 | 12 | 357 | 633 | 198 | 456 | 8.13e-12 | 68.9 |
Msa0153550 | MtrunA17_Chr1g0154211 | 21.866 | 343 | 213 | 11 | 343 | 633 | 24 | 363 | 4.15e-11 | 66.2 |
Msa0153550 | MtrunA17_Chr1g0154191 | 22.364 | 313 | 199 | 12 | 357 | 633 | 38 | 342 | 5.04e-11 | 65.9 |
Msa0153550 | MtrunA17_Chr3g0103161 | 32.673 | 101 | 60 | 3 | 727 | 826 | 29 | 122 | 5.08e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0153550 | AT2G21790.1 | 66.495 | 388 | 51 | 4 | 48 | 356 | 56 | 443 | 2.75e-166 | 508 |
Msa0153550 | AT3G18990.1 | 23.718 | 312 | 196 | 11 | 357 | 635 | 22 | 324 | 1.85e-16 | 82.4 |
Msa0153550 | AT3G18990.2 | 23.718 | 312 | 196 | 11 | 357 | 635 | 22 | 324 | 2.96e-16 | 82.4 |
Msa0153550 | AT4G33280.1 | 27.063 | 303 | 187 | 12 | 356 | 646 | 38 | 318 | 3.43e-14 | 75.5 |
Find 198 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGACCCATTTGGAAGTTTA+AGG | 0.148962 | 1_4:-16950532 | None:intergenic |
ATGGAATATGCGGGCAATTT+TGG | 0.164513 | 1_4:+16954720 | Msa0153550:CDS |
TTTGGTGCCTGATCTCTTTA+TGG | 0.178246 | 1_4:+16949840 | Msa0153550:CDS |
ACCTGGTTTGGCAGATTGTT+GGG | 0.230945 | 1_4:+16949912 | Msa0153550:CDS |
TCCCATTCGAAAACTTATTC+TGG | 0.233504 | 1_4:-16953130 | None:intergenic |
TTTCTGCACTGAATCATCTT+AGG | 0.271721 | 1_4:-16955529 | None:intergenic |
TATAATGAACATCTCGACTA+TGG | 0.280428 | 1_4:+16955121 | Msa0153550:CDS |
TTTGGAAGTTTAAGGGATAT+TGG | 0.281020 | 1_4:-16950524 | None:intergenic |
TGCTGATATAGTTGACTTCT+TGG | 0.294833 | 1_4:+16949759 | Msa0153550:CDS |
TGCAATGCAGTGATGGTATT+TGG | 0.296187 | 1_4:+16950573 | Msa0153550:CDS |
ATGGTATTTGGCTTCAAAAT+TGG | 0.298035 | 1_4:+16950585 | Msa0153550:CDS |
GAAAATCAACCAGCAGAATC+TGG | 0.315019 | 1_4:+16950083 | Msa0153550:CDS |
TATTCTTTCGAAAAGCAATT+AGG | 0.323587 | 1_4:-16951780 | None:intergenic |
CATCAAGAATGCGGCTCAAT+TGG | 0.326801 | 1_4:+16949231 | Msa0153550:CDS |
AGTTTAAGGGATATTGGATT+TGG | 0.337634 | 1_4:-16950518 | None:intergenic |
CTCCGGGCCTGGTTCCTTTG+TGG | 0.344484 | 1_4:-16953262 | None:intergenic |
TGAAACAGATGATACCTAAA+TGG | 0.345354 | 1_4:+16953004 | Msa0153550:intron |
GTGCTTCATTGGGGCAGAAC+AGG | 0.346214 | 1_4:-16949891 | None:intergenic |
TTATCACCTTCAACATGATA+TGG | 0.351084 | 1_4:-16952599 | None:intergenic |
AGCAGCCAAGGATGCATAAT+CGG | 0.351842 | 1_4:-16949110 | None:intergenic |
AATCTGACCCTCCTTTGTAT+TGG | 0.356917 | 1_4:-16950652 | None:intergenic |
CACCTGGTTTGGCAGATTGT+TGG | 0.366008 | 1_4:+16949911 | Msa0153550:CDS |
GCCAAACCAGGTGCTTCATT+GGG | 0.366941 | 1_4:-16949901 | None:intergenic |
GGCATGGTTCCTTCGTGGTT+GGG | 0.374114 | 1_4:-16952016 | None:intergenic |
AAGAAGCATGGTATATTTAG+TGG | 0.374789 | 1_4:+16955046 | Msa0153550:CDS |
TGCCAAACCAGGTGCTTCAT+TGG | 0.378584 | 1_4:-16949902 | None:intergenic |
TACTGCAGATTCTGTAAGTC+TGG | 0.379353 | 1_4:+16954870 | Msa0153550:intron |
CCCCAATGAAGCACCTGGTT+TGG | 0.394351 | 1_4:+16949900 | Msa0153550:CDS |
TCTTGATGAACCTTGAGAAT+TGG | 0.396663 | 1_4:-16955444 | None:intergenic |
AGACCCATTTGGAAGTTTAA+GGG | 0.398720 | 1_4:-16950531 | None:intergenic |
GACAACACCCGTAAAAGATA+TGG | 0.404989 | 1_4:+16954701 | Msa0153550:CDS |
CCTTGAAACTTCTCCGGGCC+TGG | 0.411612 | 1_4:-16953273 | None:intergenic |
TCAACAGAAAAGACCTCTCT+AGG | 0.413265 | 1_4:-16949309 | None:intergenic |
GGGCATGGTTCCTTCGTGGT+TGG | 0.419284 | 1_4:-16952017 | None:intergenic |
ATAGTGAGATAATATATGAT+AGG | 0.423570 | 1_4:+16949254 | Msa0153550:CDS |
TGGAAAGAGTTCAGAGCAAT+GGG | 0.432615 | 1_4:+16949860 | Msa0153550:CDS |
GCAGCCAAGGATGCATAATC+GGG | 0.439835 | 1_4:-16949109 | None:intergenic |
ATTCAGTGGAGTTGAGAGTA+GGG | 0.448522 | 1_4:+16955071 | Msa0153550:CDS |
GGTCTGCGTGCAAAATGAAT+TGG | 0.448911 | 1_4:+16950549 | Msa0153550:CDS |
ATATCCCTTAAACTTCCAAA+TGG | 0.449227 | 1_4:+16950527 | Msa0153550:CDS |
CTTCTTAGTGTGCATGAAAG+AGG | 0.451624 | 1_4:+16949513 | Msa0153550:CDS |
ATAATACCTTGAAACTGCTC+CGG | 0.452448 | 1_4:-16952038 | None:intergenic |
CTCCGGGCATGGTTCCTTCG+TGG | 0.452890 | 1_4:-16952021 | None:intergenic |
TTAGAAGTGTTGGTGAGGAC+AGG | 0.455257 | 1_4:+16951835 | Msa0153550:CDS |
AGTAAATCTGCTGGAGGGAT+TGG | 0.455606 | 1_4:+16949583 | Msa0153550:CDS |
AAGTCATCAAATCTGTGCAC+TGG | 0.456850 | 1_4:+16950114 | Msa0153550:CDS |
GGATTTACATGAAATGTTCA+AGG | 0.458756 | 1_4:+16954891 | Msa0153550:CDS |
GCAATACCTTGAAACTTCTC+CGG | 0.461040 | 1_4:-16953279 | None:intergenic |
TGCTTCTTCAACAGCTCACT+TGG | 0.461685 | 1_4:-16955031 | None:intergenic |
CTAGTTCTTCATCTTGAAGC+TGG | 0.465292 | 1_4:-16948538 | None:intergenic |
CCACCCCGATTATGCATCCT+TGG | 0.465793 | 1_4:+16949105 | Msa0153550:CDS |
GGGGATTTATGATACATTGA+AGG | 0.466284 | 1_4:+16949546 | Msa0153550:CDS |
AACCACGAAGGAACCATGCC+CGG | 0.472034 | 1_4:+16952019 | Msa0153550:CDS |
ATTATGCATCCTTGGCTGCT+AGG | 0.472580 | 1_4:+16949113 | Msa0153550:CDS |
TGATGAACCTTGAGAATTGG+AGG | 0.473528 | 1_4:-16955441 | None:intergenic |
TAAAGAGATCAGGCACCAAA+AGG | 0.474341 | 1_4:-16949837 | None:intergenic |
AAGGAACATGAGTTGAAAGT+TGG | 0.478819 | 1_4:+16951933 | Msa0153550:CDS |
TGAGAGTAGGGGAAGGAACA+TGG | 0.483751 | 1_4:+16955083 | Msa0153550:CDS |
GACCTCAACATATGATAAAG+AGG | 0.485843 | 1_4:+16949356 | Msa0153550:CDS |
TAGTGAGATAATATATGATA+GGG | 0.486663 | 1_4:+16949255 | Msa0153550:CDS |
TTATCGCCATGTCATGTTGA+AGG | 0.488274 | 1_4:+16951349 | Msa0153550:CDS |
GTCTGCGTGCAAAATGAATT+GGG | 0.489112 | 1_4:+16950550 | Msa0153550:CDS |
TGGAGGAAGCATCATACCTT+AGG | 0.491721 | 1_4:-16955424 | None:intergenic |
ATAATAACTGTGAATGAAAG+TGG | 0.492210 | 1_4:-16951990 | None:intergenic |
CCTGGTTTGGCAGATTGTTG+GGG | 0.495952 | 1_4:+16949913 | Msa0153550:CDS |
ATGAAAGAGGATAGTATTGA+GGG | 0.496212 | 1_4:+16949526 | Msa0153550:CDS |
TTGCTGTGTACTTGGAGCCA+TGG | 0.501413 | 1_4:+16949734 | Msa0153550:CDS |
CATTAAACTTTCGTAAAAGC+AGG | 0.501843 | 1_4:+16951871 | Msa0153550:CDS |
AACCACAAAGGAACCAGGCC+CGG | 0.503145 | 1_4:+16953260 | Msa0153550:CDS |
AGTGAAGCTAGGGTTCTCAT+TGG | 0.506413 | 1_4:-16952564 | None:intergenic |
CCTTGAAACTGCTCCGGGCA+TGG | 0.506957 | 1_4:-16952032 | None:intergenic |
GACTATGGGTGGTTCACTAA+AGG | 0.507216 | 1_4:+16955136 | Msa0153550:CDS |
TAATTGTGCCCAGATTCTGC+TGG | 0.508224 | 1_4:-16950092 | None:intergenic |
TAATACCTTGAAACTGCTCC+GGG | 0.510082 | 1_4:-16952037 | None:intergenic |
CCATGCCCGGAGCAGTTTCA+AGG | 0.511461 | 1_4:+16952032 | Msa0153550:CDS |
TTCTGCCCCAATGAAGCACC+TGG | 0.511533 | 1_4:+16949895 | Msa0153550:CDS |
AGTGAAACTAGGACTCTCAT+TGG | 0.512039 | 1_4:-16951320 | None:intergenic |
ATGGAAAGAGTTCAGAGCAA+TGG | 0.512042 | 1_4:+16949859 | Msa0153550:CDS |
CATGAAAGAGGATAGTATTG+AGG | 0.513073 | 1_4:+16949525 | Msa0153550:CDS |
ATCATTTCATGTCTCAGAGA+TGG | 0.514754 | 1_4:+16949428 | Msa0153550:CDS |
TGGACGTGGGAGTGAAGCTA+AGG | 0.515126 | 1_4:+16948484 | Msa0153550:CDS |
TGCATAATCGGGGTGGTTAG+CGG | 0.515425 | 1_4:-16949098 | None:intergenic |
AGAGATTGCAAAGTAAAGAC+TGG | 0.515563 | 1_4:+16955175 | Msa0153550:CDS |
ACTCTTTCCATAAAGAGATC+AGG | 0.516899 | 1_4:-16949847 | None:intergenic |
AATTCAGTGGAGTTGAGAGT+AGG | 0.518002 | 1_4:+16955070 | Msa0153550:CDS |
GTTGCTTACTGTTAATGTTG+TGG | 0.518922 | 1_4:-16955507 | None:intergenic |
TATCCCTTAAACTTCCAAAT+GGG | 0.519149 | 1_4:+16950528 | Msa0153550:CDS |
TTTGGCTTCAAAATTGGAAG+AGG | 0.520115 | 1_4:+16950591 | Msa0153550:CDS |
TAATGGAAACACAGGAGGCA+TGG | 0.520474 | 1_4:+16951240 | Msa0153550:CDS |
CAACTACTCAACTGAGGCCT+AGG | 0.520856 | 1_4:-16949490 | None:intergenic |
TGTTGAAGGTGATAATAGAT+TGG | 0.520882 | 1_4:+16951363 | Msa0153550:CDS |
TGTTGAAGGTGATAATAGAT+TGG | 0.520882 | 1_4:+16952607 | Msa0153550:CDS |
TGTGCAAAATCATGTGTTCA+AGG | 0.521657 | 1_4:+16955225 | Msa0153550:CDS |
TTATTGCCATATCATGTTGA+AGG | 0.523137 | 1_4:+16952593 | Msa0153550:CDS |
CCAGGCCCGGAGAAGTTTCA+AGG | 0.523708 | 1_4:+16953273 | Msa0153550:CDS |
CAATACCTTGAAACTTCTCC+GGG | 0.525380 | 1_4:-16953278 | None:intergenic |
GTGAAGCTAGGGTTCTCATT+GGG | 0.527042 | 1_4:-16952563 | None:intergenic |
CATGCAGGCGGCGGTTTCAG+CGG | 0.527130 | 1_4:-16949074 | None:intergenic |
TTCAGTGGAGTTGAGAGTAG+GGG | 0.529294 | 1_4:+16955072 | Msa0153550:CDS |
AAAATCAACCAGCAGAATCT+GGG | 0.535727 | 1_4:+16950084 | Msa0153550:CDS |
GTTAGCGGTCATGCAGGCGG+CGG | 0.541000 | 1_4:-16949083 | None:intergenic |
AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 1_4:+16951825 | Msa0153550:CDS |
AAGGCAACAATTAGAAGTGT+TGG | 0.542696 | 1_4:+16953063 | Msa0153550:CDS |
ATGATAAAGAGGGTTGCTGT+TGG | 0.542852 | 1_4:+16949367 | Msa0153550:CDS |
AATGGAAACACAGGAGGCAT+GGG | 0.543418 | 1_4:+16951241 | Msa0153550:CDS |
TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1_4:+16951801 | Msa0153550:CDS |
TACATGAATGAGTTATTGCA+AGG | 0.543984 | 1_4:+16953039 | Msa0153550:CDS |
CAACAGAAAAGACCTCTCTA+GGG | 0.544955 | 1_4:-16949308 | None:intergenic |
GGGGTGGTTAGCGGTCATGC+AGG | 0.547351 | 1_4:-16949089 | None:intergenic |
GTGAAACTAGGACTCTCATT+GGG | 0.547777 | 1_4:-16951319 | None:intergenic |
ATAATGAACATCTCGACTAT+GGG | 0.547880 | 1_4:+16955122 | Msa0153550:CDS |
TATATTTAGTGGAAATTCAG+TGG | 0.549056 | 1_4:+16955057 | Msa0153550:CDS |
TACCTCTCTACAAAATTCCT+CGG | 0.550263 | 1_4:-16950482 | None:intergenic |
ATGGGTGGTTCACTAAAGGC+TGG | 0.558556 | 1_4:+16955140 | Msa0153550:CDS |
GCTGTCATTAGTAAATCTGC+TGG | 0.558625 | 1_4:+16949574 | Msa0153550:CDS |
ACGTCCATTGTGAATGCCGC+CGG | 0.559795 | 1_4:-16948468 | None:intergenic |
ACTACTGCTGCTACACCTCA+AGG | 0.560864 | 1_4:+16950878 | Msa0153550:CDS |
CCCCAACAATCTGCCAAACC+AGG | 0.561409 | 1_4:-16949913 | None:intergenic |
TAGAAGTGTTGGTGAGGACA+GGG | 0.562489 | 1_4:+16951836 | Msa0153550:CDS |
ATCTCAACCACAAAGGAACC+AGG | 0.563537 | 1_4:+16953255 | Msa0153550:CDS |
ATAGCAATCGTGAATGAAAG+TGG | 0.565935 | 1_4:-16953231 | None:intergenic |
GATAATTTGACAGTGAAACT+AGG | 0.566923 | 1_4:-16951331 | None:intergenic |
GTTCTTGTGCAGATTTGAAA+CGG | 0.567332 | 1_4:-16949140 | None:intergenic |
GTCGCTCAGAAAATTTGTGC+CGG | 0.568729 | 1_4:+16949036 | Msa0153550:intron |
AATTAGAAGTGTTGGTGAGG+AGG | 0.570785 | 1_4:+16953071 | Msa0153550:CDS |
AAAATTGGAAGAGGTTTGCA+TGG | 0.571811 | 1_4:+16950600 | Msa0153550:CDS |
GATGCTTCCTCCAATTCTCA+AGG | 0.572727 | 1_4:+16955434 | Msa0153550:CDS |
AATAACATGAGAGTGAAGCT+AGG | 0.572823 | 1_4:-16952575 | None:intergenic |
CTAATGAAAACAGAGGAGGC+AGG | 0.574849 | 1_4:+16952483 | Msa0153550:CDS |
GTAAAAGATATGGAATATGC+GGG | 0.574921 | 1_4:+16954711 | Msa0153550:CDS |
AAAGAGATCAGGCACCAAAA+GGG | 0.575886 | 1_4:-16949836 | None:intergenic |
TTGTGAATGTTACTCCCTTG+AGG | 0.576438 | 1_4:-16950893 | None:intergenic |
AAAATCAGAAAGCAGTCCTA+AGG | 0.577450 | 1_4:+16955408 | Msa0153550:intron |
GGCGGCATTCACAATGGACG+TGG | 0.581490 | 1_4:+16948470 | Msa0153550:CDS |
TGCTTCATTGGGGCAGAACA+GGG | 0.586675 | 1_4:-16949890 | None:intergenic |
AGTCATCAAATCTGTGCACT+GGG | 0.588347 | 1_4:+16950115 | Msa0153550:CDS |
CAGCAGATTCAACATCATCC+TGG | 0.589095 | 1_4:-16949396 | None:intergenic |
GCGGCTAATTCATCAAGAGC+CGG | 0.589168 | 1_4:-16949055 | None:intergenic |
GGCACCGGCGGCATTCACAA+TGG | 0.590357 | 1_4:+16948464 | Msa0153550:CDS |
TTTCAACAACAACACGGCAC+CGG | 0.590996 | 1_4:+16948449 | Msa0153550:CDS |
AACAATTAGAAGTGTTGGTG+AGG | 0.594775 | 1_4:+16953068 | Msa0153550:CDS |
GGTTGCTGTTGGAACTCACC+AGG | 0.595052 | 1_4:+16949378 | Msa0153550:CDS |
GCAGAGGCTAATGGAAACAC+AGG | 0.596384 | 1_4:+16951232 | Msa0153550:intron |
ACCCTCTTTATCATATGTTG+AGG | 0.597617 | 1_4:-16949358 | None:intergenic |
TAATGAAAACAGAGGAGGCA+GGG | 0.600637 | 1_4:+16952484 | Msa0153550:CDS |
CGTAAAAGATATGGAATATG+CGG | 0.600766 | 1_4:+16954710 | Msa0153550:CDS |
AACAATTAGAAGTGTTGGTG+AGG | 0.601806 | 1_4:+16951830 | Msa0153550:CDS |
TTTGCATGGTCGCTCCGATG+TGG | 0.602338 | 1_4:+16950614 | Msa0153550:CDS |
TGAAATTATCATCAAGAATG+CGG | 0.602682 | 1_4:+16949222 | Msa0153550:CDS |
GTGGTTAGCGGTCATGCAGG+CGG | 0.606235 | 1_4:-16949086 | None:intergenic |
TCTGTTGAAAGTTGAAGGAG+TGG | 0.607527 | 1_4:+16949324 | Msa0153550:CDS |
TGATTAAAGATGATCGAGGA+AGG | 0.610178 | 1_4:-16955472 | None:intergenic |
AGTGAGATAATATATGATAG+GGG | 0.611527 | 1_4:+16949256 | Msa0153550:CDS |
GAAAGTTGAAGGAGTGGTTG+TGG | 0.611890 | 1_4:+16949330 | Msa0153550:CDS |
GTTCACAACATACGTGCCCA+TGG | 0.612170 | 1_4:+16949613 | Msa0153550:CDS |
ATAACATGAGAGTGAAGCTA+GGG | 0.614064 | 1_4:-16952574 | None:intergenic |
GTCATTAGTAAATCTGCTGG+AGG | 0.617415 | 1_4:+16949577 | Msa0153550:CDS |
AATTGGGTGCAATGCAGTGA+TGG | 0.617555 | 1_4:+16950566 | Msa0153550:CDS |
AGTGAGCTGTTGAAGAAGCA+TGG | 0.617628 | 1_4:+16955034 | Msa0153550:CDS |
TTGTATTCAAAACCCTAGAG+AGG | 0.618365 | 1_4:+16949296 | Msa0153550:CDS |
TATTCAAGTATGAGATGCAA+CGG | 0.618523 | 1_4:+16950716 | Msa0153550:CDS |
GCACGCTAAGTTGATCAGAA+AGG | 0.624203 | 1_4:+16949706 | Msa0153550:intron |
GTGTTGGTGAGGACAGGGCA+TGG | 0.626789 | 1_4:+16951841 | Msa0153550:CDS |
ACCTCAACATATGATAAAGA+GGG | 0.628072 | 1_4:+16949357 | Msa0153550:CDS |
GGAAGGAACATGGTTTGTAG+AGG | 0.629163 | 1_4:+16955093 | Msa0153550:CDS |
AACGGAAATCCTAGCAGCCA+AGG | 0.630130 | 1_4:-16949122 | None:intergenic |
TGTTCTTGCAGATGATTCCG+AGG | 0.632967 | 1_4:+16950465 | Msa0153550:intron |
ATGAACATCTCGACTATGGG+TGG | 0.635276 | 1_4:+16955125 | Msa0153550:CDS |
CAACAACAACACGGCACCGG+CGG | 0.635347 | 1_4:+16948452 | Msa0153550:CDS |
CCAAACCAGGTGCTTCATTG+GGG | 0.636999 | 1_4:-16949900 | None:intergenic |
GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1_4:+16951806 | Msa0153550:CDS |
GAATGAGTTATTGCAAGGGA+AGG | 0.643476 | 1_4:+16953044 | Msa0153550:CDS |
GTGGAGTTGAGAGTAGGGGA+AGG | 0.647557 | 1_4:+16955076 | Msa0153550:CDS |
TGCTATCATCTCAACCACAA+AGG | 0.651551 | 1_4:+16953248 | Msa0153550:CDS |
CAGGAACATAACTTGCAAGT+CGG | 0.653078 | 1_4:+16953174 | Msa0153550:CDS |
CTACTGCTGCTACACCTCAA+GGG | 0.653810 | 1_4:+16950879 | Msa0153550:CDS |
GCAGAGACTAATGAAAACAG+AGG | 0.657129 | 1_4:+16952476 | Msa0153550:intron |
GTTCCAGCGTTGAAAAGTGT+AGG | 0.657151 | 1_4:-16949466 | None:intergenic |
TTATCACCTTCAACATGACA+TGG | 0.659419 | 1_4:-16951355 | None:intergenic |
ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1_4:+16951802 | Msa0153550:CDS |
ACATGAATGAGTTATTGCAA+GGG | 0.661417 | 1_4:+16953040 | Msa0153550:CDS |
GGACGTGGGAGTGAAGCTAA+GGG | 0.662883 | 1_4:+16948485 | Msa0153550:CDS |
TCAACTATATCAGCATGCCA+TGG | 0.671085 | 1_4:-16949751 | None:intergenic |
TGGACTTGTGCAGAAAACCA+AGG | 0.671628 | 1_4:+16954660 | Msa0153550:intron |
TCATTAGTAAATCTGCTGGA+GGG | 0.679752 | 1_4:+16949578 | Msa0153550:CDS |
TATTATTATCCCAACCACGA+AGG | 0.680774 | 1_4:+16952007 | Msa0153550:CDS |
CCAAGGATGCATAATCGGGG+TGG | 0.693063 | 1_4:-16949105 | None:intergenic |
TGAAAGAGGATAGTATTGAG+GGG | 0.695012 | 1_4:+16949527 | Msa0153550:CDS |
AAACTAAAAGATCTCCACAT+CGG | 0.700040 | 1_4:-16950628 | None:intergenic |
GAGGCTAATGGAAACACAGG+AGG | 0.702704 | 1_4:+16951235 | Msa0153550:intron |
GAGACTAATGAAAACAGAGG+AGG | 0.703693 | 1_4:+16952479 | Msa0153550:intron |
GCGGCATTCACAATGGACGT+GGG | 0.705721 | 1_4:+16948471 | Msa0153550:CDS |
AAGAAGCAACTACTCAACTG+AGG | 0.709378 | 1_4:-16949496 | None:intergenic |
ACATCATCAGCAATCAACAA+CGG | 0.718982 | 1_4:-16949196 | None:intergenic |
CAGCCAAGGATGCATAATCG+GGG | 0.721826 | 1_4:-16949108 | None:intergenic |
TTGGTGAGGAGGATAGAACA+TGG | 0.724838 | 1_4:+16953082 | Msa0153550:CDS |
ATGTCGTTTCAACAACAACA+CGG | 0.725719 | 1_4:+16948443 | Msa0153550:CDS |
GCTTTGATTAAAGATGATCG+AGG | 0.729435 | 1_4:-16955476 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTGATATAATATATAGATT+AGG | + | chr1_4:16948671-16948690 | Msa0153550:intron | 10.0% |
!! | TTGATATAATATATAGATTA+GGG | + | chr1_4:16948672-16948691 | Msa0153550:intron | 10.0% |
!!! | AAAACTTCAAAAATTATTTT+CGG | - | chr1_4:16952456-16952475 | None:intergenic | 10.0% |
!!! | TAAAATATACAAATTTTTCA+AGG | + | chr1_4:16954438-16954457 | Msa0153550:intron | 10.0% |
!! | AAAATATACATAAATAGAGT+GGG | - | chr1_4:16952350-16952369 | None:intergenic | 15.0% |
!! | AAAAATATACATAAATAGAG+TGG | - | chr1_4:16952351-16952370 | None:intergenic | 15.0% |
!!! | CAAATGTGTAAAATATTTTA+AGG | + | chr1_4:16953413-16953432 | Msa0153550:intron | 15.0% |
!!! | ATATTTTAAGGTTTAAATCT+TGG | + | chr1_4:16953425-16953444 | Msa0153550:intron | 15.0% |
!!! | CTAAGATTAATTTTTATACA+CGG | + | chr1_4:16954497-16954516 | Msa0153550:intron | 15.0% |
!! | CAAGAATAATTAGAACTAAT+TGG | - | chr1_4:16948807-16948826 | None:intergenic | 20.0% |
!!! | AATCATCTGAATTTAATTTC+AGG | - | chr1_4:16948857-16948876 | None:intergenic | 20.0% |
!! | ATAGTGAGATAATATATGAT+AGG | + | chr1_4:16949254-16949273 | Msa0153550:CDS | 20.0% |
!! | TAGTGAGATAATATATGATA+GGG | + | chr1_4:16949255-16949274 | Msa0153550:CDS | 20.0% |
!! | TTGGAGTTAAAAATAAATCA+TGG | + | chr1_4:16949778-16949797 | Msa0153550:CDS | 20.0% |
!! | GTTAAAAATAAATCATGGAA+AGG | + | chr1_4:16949783-16949802 | Msa0153550:CDS | 20.0% |
!!! | AATTGAAACTTTCTAGTTAT+TGG | - | chr1_4:16950190-16950209 | None:intergenic | 20.0% |
!! | AAAAAGAGAATCAATTCAAA+TGG | + | chr1_4:16950848-16950867 | Msa0153550:CDS | 20.0% |
!! | TAAACAGATGAATGAATAAA+AGG | - | chr1_4:16950976-16950995 | None:intergenic | 20.0% |
!! | TTATTCATTCATCTGTTTAT+AGG | + | chr1_4:16950977-16950996 | Msa0153550:intron | 20.0% |
!!! | AATTTGTATGGATTAAAAAG+TGG | - | chr1_4:16951063-16951082 | None:intergenic | 20.0% |
!!! | GTATACTTTTGTAATTTGTA+TGG | - | chr1_4:16951075-16951094 | None:intergenic | 20.0% |
!! | TATTACAGAAAAAGTAGTAT+AGG | - | chr1_4:16951396-16951415 | None:intergenic | 20.0% |
!! | TATTAACAAGAGAAACATTT+GGG | - | chr1_4:16951498-16951517 | None:intergenic | 20.0% |
!! | ACTAATTGAAAACATATTCA+TGG | + | chr1_4:16951536-16951555 | Msa0153550:intron | 20.0% |
!!! | TTGATTTTCTTTTTCTTGAT+GGG | - | chr1_4:16952191-16952210 | None:intergenic | 20.0% |
!!! | ATTGATTTTCTTTTTCTTGA+TGG | - | chr1_4:16952192-16952211 | None:intergenic | 20.0% |
!!! | ATAAACACATTGATTTTGTT+GGG | - | chr1_4:16952252-16952271 | None:intergenic | 20.0% |
!!! | AATAAACACATTGATTTTGT+TGG | - | chr1_4:16952253-16952272 | None:intergenic | 20.0% |
!!! | TTTTGTATGGATTAAAAAGT+GGG | - | chr1_4:16952307-16952326 | None:intergenic | 20.0% |
!! | TTAATGAGAAAAAAAAGTCT+AGG | - | chr1_4:16952640-16952659 | None:intergenic | 20.0% |
!! | TACTAACAAAAACATATTCA+AGG | + | chr1_4:16952780-16952799 | Msa0153550:intron | 20.0% |
!!! | TAACAAAAGAGAAAAAGTAT+AGG | + | chr1_4:16952832-16952851 | Msa0153550:intron | 20.0% |
!!! | TATTCTTTTGAAAACCATTT+AGG | - | chr1_4:16953021-16953040 | None:intergenic | 20.0% |
!! | ATGTTAATGTTACTATCATT+AGG | + | chr1_4:16953543-16953562 | Msa0153550:intron | 20.0% |
!! | TGTTAATGTTACTATCATTA+GGG | + | chr1_4:16953544-16953563 | Msa0153550:intron | 20.0% |
!!! | GATTTTAGTCATTCTAATAA+TGG | + | chr1_4:16954362-16954381 | Msa0153550:intron | 20.0% |
!! | AACAAAGAAAACATAGTTTA+AGG | - | chr1_4:16954844-16954863 | None:intergenic | 20.0% |
!!! | ATTACATGTTTGCTTTTGAA+GGG | - | chr1_4:16948915-16948934 | None:intergenic | 25.0% |
!!! | ATCTTTTTCTGAAACTGTTA+AGG | + | chr1_4:16949171-16949190 | Msa0153550:CDS | 25.0% |
! | TGAAATTATCATCAAGAATG+CGG | + | chr1_4:16949222-16949241 | Msa0153550:CDS | 25.0% |
! | AGTGAGATAATATATGATAG+GGG | + | chr1_4:16949256-16949275 | Msa0153550:CDS | 25.0% |
! | CAAAAAAGATTATTCAAGCA+CGG | + | chr1_4:16949983-16950002 | Msa0153550:intron | 25.0% |
!!! | AAATCCTTACATGCTTTTTA+GGG | + | chr1_4:16950047-16950066 | Msa0153550:intron | 25.0% |
!!! | TATATTTTCTCTGTTAGCTT+TGG | + | chr1_4:16950240-16950259 | Msa0153550:intron | 25.0% |
! | TACACTTAAAAATGTGGATA+GGG | + | chr1_4:16950300-16950319 | Msa0153550:intron | 25.0% |
!!! | GTTTTTAGTATCAGACTTTT+AGG | - | chr1_4:16950394-16950413 | None:intergenic | 25.0% |
!!! | CTTTTAGTTTTCCAATACAA+AGG | + | chr1_4:16950641-16950660 | Msa0153550:CDS | 25.0% |
!!! | ATTGATTCTCTTTTTCTTGA+GGG | - | chr1_4:16950843-16950862 | None:intergenic | 25.0% |
!!! | AATTGATTCTCTTTTTCTTG+AGG | - | chr1_4:16950844-16950863 | None:intergenic | 25.0% |
!! | CAAAATTTGAGATGAACTAA+GGG | - | chr1_4:16951024-16951043 | None:intergenic | 25.0% |
!! | AACTATTTTCAGCATTTGAA+AGG | - | chr1_4:16951201-16951220 | None:intergenic | 25.0% |
!!! | TAGTTTTTAAAGTTTTGCAG+AGG | + | chr1_4:16951216-16951235 | Msa0153550:intron | 25.0% |
! | ATTAACAAGAGAAACATTTG+GGG | - | chr1_4:16951497-16951516 | None:intergenic | 25.0% |
! | CTATTAACAAGAGAAACATT+TGG | - | chr1_4:16951499-16951518 | None:intergenic | 25.0% |
! | TATTCTTTCGAAAAGCAATT+AGG | - | chr1_4:16951783-16951802 | None:intergenic | 25.0% |
! | ATAATAACTGTGAATGAAAG+TGG | - | chr1_4:16951993-16952012 | None:intergenic | 25.0% |
!! | TTATTATTTTCATCGTCACT+GGG | - | chr1_4:16952164-16952183 | None:intergenic | 25.0% |
!! | TTTATTATTTTCATCGTCAC+TGG | - | chr1_4:16952165-16952184 | None:intergenic | 25.0% |
!! | TGATTTTCTTTTTCTTGATG+GGG | - | chr1_4:16952190-16952209 | None:intergenic | 25.0% |
!!! | CTTTTGTATGGATTAAAAAG+TGG | - | chr1_4:16952308-16952327 | None:intergenic | 25.0% |
!! | TTAAAACATGTGCTTTTGTA+TGG | - | chr1_4:16952320-16952339 | None:intergenic | 25.0% |
! | AAATGCACAAAAACTAAAGA+TGG | + | chr1_4:16952512-16952531 | Msa0153550:CDS | 25.0% |
! | AATGCACAAAAACTAAAGAT+GGG | + | chr1_4:16952513-16952532 | Msa0153550:CDS | 25.0% |
! | CTATTATCAAATGAGACATT+TGG | - | chr1_4:16952744-16952763 | None:intergenic | 25.0% |
! | AATTTGATACATTTAAGCAG+TGG | + | chr1_4:16952923-16952942 | Msa0153550:intron | 25.0% |
! | TTAACTATATGTAATGTGCA+AGG | - | chr1_4:16952959-16952978 | None:intergenic | 25.0% |
!! | TTTGATTGATTGTAGTTTGT+TGG | - | chr1_4:16953397-16953416 | None:intergenic | 25.0% |
!!! | ATTGTCATGTTTACCTTTTT+TGG | + | chr1_4:16953877-16953896 | Msa0153550:intron | 25.0% |
!!! | GAGAGAGAAGTTTATTTTAA+TGG | - | chr1_4:16953923-16953942 | None:intergenic | 25.0% |
! | TTTGTTCATATATATGCAGT+TGG | + | chr1_4:16955000-16955019 | Msa0153550:intron | 25.0% |
! | TATATTTAGTGGAAATTCAG+TGG | + | chr1_4:16955057-16955076 | Msa0153550:CDS | 25.0% |
!!! | TTGCTTGTTTTGTCATTTTA+AGG | + | chr1_4:16955267-16955286 | Msa0153550:intron | 25.0% |
!!! | TGCTTGTTTTGTCATTTTAA+GGG | + | chr1_4:16955268-16955287 | Msa0153550:intron | 25.0% |
! | TTTGTTTCATTTAAACCAAC+GGG | - | chr1_4:16955358-16955377 | None:intergenic | 25.0% |
!! | CTTTGTTTCATTTAAACCAA+CGG | - | chr1_4:16955359-16955378 | None:intergenic | 25.0% |
GGGTTTAGTTAAGATAGAAA+TGG | - | chr1_4:16948606-16948625 | None:intergenic | 30.0% | |
ATGATAATTCCACAAGTGTT+AGG | - | chr1_4:16948639-16948658 | None:intergenic | 30.0% | |
GTGTATCAACTTCAACAAAA+TGG | + | chr1_4:16948880-16948899 | Msa0153550:intron | 30.0% | |
!! | CATTACATGTTTGCTTTTGA+AGG | - | chr1_4:16948916-16948935 | None:intergenic | 30.0% |
ATGTAATCATCCTTATCAAG+AGG | + | chr1_4:16948933-16948952 | Msa0153550:intron | 30.0% | |
!! | GGTTCATTTTGACAAGATAA+CGG | + | chr1_4:16948957-16948976 | Msa0153550:intron | 30.0% |
! | TCTTTTCTGTTGAAAGTTGA+AGG | + | chr1_4:16949319-16949338 | Msa0153550:CDS | 30.0% |
ACCTCAACATATGATAAAGA+GGG | + | chr1_4:16949357-16949376 | Msa0153550:CDS | 30.0% | |
! | ATGAAAGAGGATAGTATTGA+GGG | + | chr1_4:16949526-16949545 | Msa0153550:CDS | 30.0% |
!!! | AGATTTATTTTACGCCCTTT+TGG | + | chr1_4:16949822-16949841 | Msa0153550:CDS | 30.0% |
!! | GAAATCCTTACATGCTTTTT+AGG | + | chr1_4:16950046-16950065 | Msa0153550:intron | 30.0% |
!! | CTTTCTAGTTATTGGTTCAA+AGG | - | chr1_4:16950182-16950201 | None:intergenic | 30.0% |
TACTGGTACACTTAAAAATG+TGG | + | chr1_4:16950294-16950313 | Msa0153550:intron | 30.0% | |
GTACACTTAAAAATGTGGAT+AGG | + | chr1_4:16950299-16950318 | Msa0153550:intron | 30.0% | |
!! | AGACTTTTAGGTGGAAAAAT+GGG | - | chr1_4:16950382-16950401 | None:intergenic | 30.0% |
! | TTTAGTATCAGACTTTTAGG+TGG | - | chr1_4:16950391-16950410 | None:intergenic | 30.0% |
AGTTTAAGGGATATTGGATT+TGG | - | chr1_4:16950521-16950540 | None:intergenic | 30.0% | |
TTTGGAAGTTTAAGGGATAT+TGG | - | chr1_4:16950527-16950546 | None:intergenic | 30.0% | |
ATATCCCTTAAACTTCCAAA+TGG | + | chr1_4:16950527-16950546 | Msa0153550:CDS | 30.0% | |
TATCCCTTAAACTTCCAAAT+GGG | + | chr1_4:16950528-16950547 | Msa0153550:CDS | 30.0% | |
! | ATGGTATTTGGCTTCAAAAT+TGG | + | chr1_4:16950585-16950604 | Msa0153550:CDS | 30.0% |
AAACTAAAAGATCTCCACAT+CGG | - | chr1_4:16950631-16950650 | None:intergenic | 30.0% | |
!! | TTAGTTTTCCAATACAAAGG+AGG | + | chr1_4:16950644-16950663 | Msa0153550:CDS | 30.0% |
! | TAGTTTTCCAATACAAAGGA+GGG | + | chr1_4:16950645-16950664 | Msa0153550:CDS | 30.0% |
TATTCAAGTATGAGATGCAA+CGG | + | chr1_4:16950716-16950735 | Msa0153550:CDS | 30.0% | |
!! | TTAGTATTTTCAGTGTCACT+AGG | - | chr1_4:16950815-16950834 | None:intergenic | 30.0% |
! | TTGATTCTCTTTTTCTTGAG+GGG | - | chr1_4:16950842-16950861 | None:intergenic | 30.0% |
! | CTTACCTGAAACTTTTTGTT+GGG | - | chr1_4:16950942-16950961 | None:intergenic | 30.0% |
! | ACTTACCTGAAACTTTTTGT+TGG | - | chr1_4:16950943-16950962 | None:intergenic | 30.0% |
! | CCAAAATTTGAGATGAACTA+AGG | - | chr1_4:16951025-16951044 | None:intergenic | 30.0% |
! | CCTTAGTTCATCTCAAATTT+TGG | + | chr1_4:16951022-16951041 | Msa0153550:intron | 30.0% |
AGAGTGTGCATAAATAAAGT+GGG | - | chr1_4:16951113-16951132 | None:intergenic | 30.0% | |
! | AAGAGTGTGCATAAATAAAG+TGG | - | chr1_4:16951114-16951133 | None:intergenic | 30.0% |
GATAATTTGACAGTGAAACT+AGG | - | chr1_4:16951334-16951353 | None:intergenic | 30.0% | |
TGTTGAAGGTGATAATAGAT+TGG | + | chr1_4:16951363-16951382 | Msa0153550:CDS | 30.0% | |
!! | AGAGGCTTTCATTTTTCTAT+AGG | + | chr1_4:16951441-16951460 | Msa0153550:intron | 30.0% |
TACATGAATGAGTTATTGCA+AGG | + | chr1_4:16951801-16951820 | Msa0153550:CDS | 30.0% | |
ACATGAATGAGTTATTGCAA+GGG | + | chr1_4:16951802-16951821 | Msa0153550:CDS | 30.0% | |
CATTAAACTTTCGTAAAAGC+AGG | + | chr1_4:16951871-16951890 | Msa0153550:CDS | 30.0% | |
!!! | AAAAGCACATGTTTTAATCC+TGG | + | chr1_4:16952323-16952342 | Msa0153550:intron | 30.0% |
! | AAATTATTTTCGGCACTTGA+AGG | - | chr1_4:16952446-16952465 | None:intergenic | 30.0% |
TTATTGCCATATCATGTTGA+AGG | + | chr1_4:16952593-16952612 | Msa0153550:CDS | 30.0% | |
TTATCACCTTCAACATGATA+TGG | - | chr1_4:16952602-16952621 | None:intergenic | 30.0% | |
TGTTGAAGGTGATAATAGAT+TGG | + | chr1_4:16951363-16951382 | Msa0153550:CDS | 30.0% | |
! | AGAGGCTTTCATTTTACTAT+AGG | + | chr1_4:16952686-16952705 | Msa0153550:intron | 30.0% |
ACTATAGGAACTGATTGTAT+TGG | + | chr1_4:16952701-16952720 | Msa0153550:intron | 30.0% | |
TTGATCTTCAAATGTGTCTT+TGG | - | chr1_4:16952865-16952884 | None:intergenic | 30.0% | |
ATTTAGGTATCATCTGTTTC+AGG | - | chr1_4:16953005-16953024 | None:intergenic | 30.0% | |
TGAAACAGATGATACCTAAA+TGG | + | chr1_4:16953004-16953023 | Msa0153550:intron | 30.0% | |
TACATGAATGAGTTATTGCA+AGG | + | chr1_4:16951801-16951820 | Msa0153550:CDS | 30.0% | |
ACATGAATGAGTTATTGCAA+GGG | + | chr1_4:16951802-16951821 | Msa0153550:CDS | 30.0% | |
! | ATCCAGAATAAGTTTTCGAA+TGG | + | chr1_4:16953128-16953147 | Msa0153550:CDS | 30.0% |
! | TCCAGAATAAGTTTTCGAAT+GGG | + | chr1_4:16953129-16953148 | Msa0153550:CDS | 30.0% |
AACGCAATAAAATAGAGCTT+GGG | - | chr1_4:16953511-16953530 | None:intergenic | 30.0% | |
! | CGTTGAACAAGTATTTGTTA+CGG | - | chr1_4:16953609-16953628 | None:intergenic | 30.0% |
CGTAACAAATACTTGTTCAA+CGG | + | chr1_4:16953607-16953626 | Msa0153550:intron | 30.0% | |
AAACAACAGTAATAAGTGGA+CGG | - | chr1_4:16953736-16953755 | None:intergenic | 30.0% | |
ACACAAACAACAGTAATAAG+TGG | - | chr1_4:16953740-16953759 | None:intergenic | 30.0% | |
GAGATATGAAAAGCCAAAAA+AGG | - | chr1_4:16953893-16953912 | None:intergenic | 30.0% | |
!! | ATGAGGTTTTATGACAGTAA+GGG | - | chr1_4:16954259-16954278 | None:intergenic | 30.0% |
!! | AATGAGGTTTTATGACAGTA+AGG | - | chr1_4:16954260-16954279 | None:intergenic | 30.0% |
GTCATAAAACCTCATTATGA+AGG | + | chr1_4:16954264-16954283 | Msa0153550:intron | 30.0% | |
AACCTCATTATGAAGGATAT+TGG | + | chr1_4:16954271-16954290 | Msa0153550:intron | 30.0% | |
TCATTATGAAGGATATTGGT+GGG | + | chr1_4:16954275-16954294 | Msa0153550:intron | 30.0% | |
!! | GTGTTGTCTTTGATTTTTCT+TGG | - | chr1_4:16954689-16954708 | None:intergenic | 30.0% |
! | GCATATTCCATATCTTTTAC+GGG | - | chr1_4:16954711-16954730 | None:intergenic | 30.0% |
! | CGCATATTCCATATCTTTTA+CGG | - | chr1_4:16954712-16954731 | None:intergenic | 30.0% |
CGTAAAAGATATGGAATATG+CGG | + | chr1_4:16954710-16954729 | Msa0153550:CDS | 30.0% | |
GTAAAAGATATGGAATATGC+GGG | + | chr1_4:16954711-16954730 | Msa0153550:CDS | 30.0% | |
!! | ATTTTGGAGATGGAATTTCA+AGG | + | chr1_4:16954736-16954755 | Msa0153550:CDS | 30.0% |
!! | CACAAAAACACATGGTTTTA+GGG | + | chr1_4:16954764-16954783 | Msa0153550:CDS | 30.0% |
!!! | ACAAAAACACATGGTTTTAG+GGG | + | chr1_4:16954765-16954784 | Msa0153550:CDS | 30.0% |
GGATTTACATGAAATGTTCA+AGG | + | chr1_4:16954891-16954910 | Msa0153550:CDS | 30.0% | |
! | AAGAAGCATGGTATATTTAG+TGG | + | chr1_4:16955046-16955065 | Msa0153550:CDS | 30.0% |
TATAATGAACATCTCGACTA+TGG | + | chr1_4:16955121-16955140 | Msa0153550:CDS | 30.0% | |
ATAATGAACATCTCGACTAT+GGG | + | chr1_4:16955122-16955141 | Msa0153550:CDS | 30.0% | |
!!! | GCTTGTTTTGTCATTTTAAG+GGG | + | chr1_4:16955269-16955288 | Msa0153550:intron | 30.0% |
TATTCTCTAATTACGAGACT+CGG | + | chr1_4:16955310-16955329 | Msa0153550:intron | 30.0% | |
!! | CGTTGGTTTAAATGAAACAA+AGG | + | chr1_4:16955357-16955376 | Msa0153550:intron | 30.0% |
! | ATGTCGTTTCAACAACAACA+CGG | + | chr1_4:16948443-16948462 | Msa0153550:CDS | 35.0% |
GAATAAGAAGAAAGTGAGTG+TGG | - | chr1_4:16948572-16948591 | None:intergenic | 35.0% | |
AAGTGTTAGGAAACATGCAT+GGG | - | chr1_4:16948626-16948645 | None:intergenic | 35.0% | |
ACCATCATCAAAACAGTGTT+GGG | - | chr1_4:16948763-16948782 | None:intergenic | 35.0% | |
AACCATCATCAAAACAGTGT+TGG | - | chr1_4:16948764-16948783 | None:intergenic | 35.0% | |
TAATCATCCTTATCAAGAGG+CGG | + | chr1_4:16948936-16948955 | Msa0153550:intron | 35.0% | |
AGGTTGAAGAAACTGAGTTA+TGG | + | chr1_4:16948982-16949001 | Msa0153550:intron | 35.0% | |
! | TTTTCTGAGCGACTAAAACA+GGG | - | chr1_4:16949029-16949048 | None:intergenic | 35.0% |
! | ATTTTCTGAGCGACTAAAAC+AGG | - | chr1_4:16949030-16949049 | None:intergenic | 35.0% |
GTTCTTGTGCAGATTTGAAA+CGG | - | chr1_4:16949143-16949162 | None:intergenic | 35.0% | |
ACATCATCAGCAATCAACAA+CGG | - | chr1_4:16949199-16949218 | None:intergenic | 35.0% | |
TTGTATTCAAAACCCTAGAG+AGG | + | chr1_4:16949296-16949315 | Msa0153550:CDS | 35.0% | |
GACCTCAACATATGATAAAG+AGG | + | chr1_4:16949356-16949375 | Msa0153550:CDS | 35.0% | |
ACCCTCTTTATCATATGTTG+AGG | - | chr1_4:16949361-16949380 | None:intergenic | 35.0% | |
ATCATTTCATGTCTCAGAGA+TGG | + | chr1_4:16949428-16949447 | Msa0153550:CDS | 35.0% | |
CATGAAAGAGGATAGTATTG+AGG | + | chr1_4:16949525-16949544 | Msa0153550:CDS | 35.0% | |
! | TGAAAGAGGATAGTATTGAG+GGG | + | chr1_4:16949527-16949546 | Msa0153550:CDS | 35.0% |
GGGGATTTATGATACATTGA+AGG | + | chr1_4:16949546-16949565 | Msa0153550:CDS | 35.0% | |
TCATTAGTAAATCTGCTGGA+GGG | + | chr1_4:16949578-16949597 | Msa0153550:CDS | 35.0% | |
GGAACAAATGAAACGTCTAA+TGG | + | chr1_4:16949649-16949668 | Msa0153550:intron | 35.0% | |
! | TGCTGATATAGTTGACTTCT+TGG | + | chr1_4:16949759-16949778 | Msa0153550:CDS | 35.0% |
ACTCTTTCCATAAAGAGATC+AGG | - | chr1_4:16949850-16949869 | None:intergenic | 35.0% | |
TACACTCAGTATGAAAAAGC+AGG | + | chr1_4:16949955-16949974 | Msa0153550:intron | 35.0% | |
!! | TTTTTAGGGATGCTTGCAAT+AGG | + | chr1_4:16950061-16950080 | Msa0153550:intron | 35.0% |
AAAATCAACCAGCAGAATCT+GGG | + | chr1_4:16950084-16950103 | Msa0153550:CDS | 35.0% | |
TCTATGTGTATTGTTTGCTC+AGG | + | chr1_4:16950268-16950287 | Msa0153550:intron | 35.0% | |
ATTGTTTGCTCAGGTATTAC+TGG | + | chr1_4:16950277-16950296 | Msa0153550:intron | 35.0% | |
!! | CAGACTTTTAGGTGGAAAAA+TGG | - | chr1_4:16950383-16950402 | None:intergenic | 35.0% |
TACCTCTCTACAAAATTCCT+CGG | - | chr1_4:16950485-16950504 | None:intergenic | 35.0% | |
!! | GGAATTTTGTAGAGAGGTAT+TGG | + | chr1_4:16950486-16950505 | Msa0153550:CDS | 35.0% |
AGACCCATTTGGAAGTTTAA+GGG | - | chr1_4:16950534-16950553 | None:intergenic | 35.0% | |
! | TTTGGCTTCAAAATTGGAAG+AGG | + | chr1_4:16950591-16950610 | Msa0153550:CDS | 35.0% |
AAAATTGGAAGAGGTTTGCA+TGG | + | chr1_4:16950600-16950619 | Msa0153550:CDS | 35.0% | |
! | TAAAGTTTTGCAGAGGCTAA+TGG | + | chr1_4:16951223-16951242 | Msa0153550:intron | 35.0% |
TTATCACCTTCAACATGACA+TGG | - | chr1_4:16951358-16951377 | None:intergenic | 35.0% | |
AACTAGCAGAAGAGACATTT+AGG | + | chr1_4:16951642-16951661 | Msa0153550:intron | 35.0% | |
! | AATTAGGTATCGTCTGTTTC+AGG | - | chr1_4:16951767-16951786 | None:intergenic | 35.0% |
! | AAGGCAACAATTAGAAGTGT+TGG | + | chr1_4:16951825-16951844 | Msa0153550:CDS | 35.0% |
!! | AACAATTAGAAGTGTTGGTG+AGG | + | chr1_4:16951830-16951849 | Msa0153550:CDS | 35.0% |
!! | TGGTTGGAAGTCATTTTCAA+AGG | + | chr1_4:16951914-16951933 | Msa0153550:CDS | 35.0% |
! | AAGGAACATGAGTTGAAAGT+TGG | + | chr1_4:16951933-16951952 | Msa0153550:CDS | 35.0% |
TATTATTATCCCAACCACGA+AGG | + | chr1_4:16952007-16952026 | Msa0153550:CDS | 35.0% | |
ATAATACCTTGAAACTGCTC+CGG | - | chr1_4:16952041-16952060 | None:intergenic | 35.0% | |
ATAACATGAGAGTGAAGCTA+GGG | - | chr1_4:16952577-16952596 | None:intergenic | 35.0% | |
AATAACATGAGAGTGAAGCT+AGG | - | chr1_4:16952578-16952597 | None:intergenic | 35.0% | |
AACTAGCAGAAGAGACATTT+AGG | + | chr1_4:16951642-16951661 | Msa0153550:intron | 35.0% | |
! | AAGGCAACAATTAGAAGTGT+TGG | + | chr1_4:16951825-16951844 | Msa0153550:CDS | 35.0% |
!! | AACAATTAGAAGTGTTGGTG+AGG | + | chr1_4:16951830-16951849 | Msa0153550:CDS | 35.0% |
TCCCATTCGAAAACTTATTC+TGG | - | chr1_4:16953133-16953152 | None:intergenic | 35.0% | |
! | ATAAGTTTTCGAATGGGAAG+TGG | + | chr1_4:16953135-16953154 | Msa0153550:CDS | 35.0% |
ATAGCAATCGTGAATGAAAG+TGG | - | chr1_4:16953234-16953253 | None:intergenic | 35.0% | |
ACGCAATAAAATAGAGCTTG+GGG | - | chr1_4:16953510-16953529 | None:intergenic | 35.0% | |
CAACGCAATAAAATAGAGCT+TGG | - | chr1_4:16953512-16953531 | None:intergenic | 35.0% | |
! | CAAGCTCTATTTTATTGCGT+TGG | + | chr1_4:16953510-16953529 | Msa0153550:intron | 35.0% |
! | AGTATTTGTTACGGTTACGT+CGG | - | chr1_4:16953600-16953619 | None:intergenic | 35.0% |
TGAGACAAATCAGTTTCACA+TGG | + | chr1_4:16953658-16953677 | Msa0153550:intron | 35.0% | |
CAAATCAGTTTCACATGGTT+TGG | + | chr1_4:16953663-16953682 | Msa0153550:intron | 35.0% | |
TTCTGTCAAAATGGAATGAG+CGG | + | chr1_4:16953701-16953720 | Msa0153550:intron | 35.0% | |
AACAACAGTAATAAGTGGAC+GGG | - | chr1_4:16953735-16953754 | None:intergenic | 35.0% | |
AGAGAGAAGAAACAATCACA+GGG | + | chr1_4:16953996-16954015 | Msa0153550:intron | 35.0% | |
TCTGATCTACAGATGTTCTT+CGG | + | chr1_4:16954187-16954206 | Msa0153550:intron | 35.0% | |
!! | TGAGGTTTTATGACAGTAAG+GGG | - | chr1_4:16954258-16954277 | None:intergenic | 35.0% |
CACCAATATCCTTCATAATG+AGG | - | chr1_4:16954276-16954295 | None:intergenic | 35.0% | |
CTCATTATGAAGGATATTGG+TGG | + | chr1_4:16954274-16954293 | Msa0153550:intron | 35.0% | |
CTAAAAGTGATATATCTGCG+AGG | + | chr1_4:16954528-16954547 | Msa0153550:intron | 35.0% | |
! | TTGATTTTTCTTGGACTCCT+TGG | - | chr1_4:16954680-16954699 | None:intergenic | 35.0% |
! | GCACAAAAACACATGGTTTT+AGG | + | chr1_4:16954763-16954782 | Msa0153550:CDS | 35.0% |
CACACACATAGCTATATACA+TGG | - | chr1_4:16954964-16954983 | None:intergenic | 35.0% | |
AGAGATTGCAAAGTAAAGAC+TGG | + | chr1_4:16955175-16955194 | Msa0153550:CDS | 35.0% | |
TGTGCAAAATCATGTGTTCA+AGG | + | chr1_4:16955225-16955244 | Msa0153550:CDS | 35.0% | |
! | TTCTGATTTTCCAACCTTGT+CGG | - | chr1_4:16955398-16955417 | None:intergenic | 35.0% |
AAAATCAGAAAGCAGTCCTA+AGG | + | chr1_4:16955408-16955427 | Msa0153550:intron | 35.0% | |
TCTTGATGAACCTTGAGAAT+TGG | - | chr1_4:16955447-16955466 | None:intergenic | 35.0% | |
TGATTAAAGATGATCGAGGA+AGG | - | chr1_4:16955475-16955494 | None:intergenic | 35.0% | |
GCTTTGATTAAAGATGATCG+AGG | - | chr1_4:16955479-16955498 | None:intergenic | 35.0% | |
GTTGCTTACTGTTAATGTTG+TGG | - | chr1_4:16955510-16955529 | None:intergenic | 35.0% | |
! | CTAGTTCTTCATCTTGAAGC+TGG | - | chr1_4:16948541-16948560 | None:intergenic | 40.0% |
CAAGTGTTAGGAAACATGCA+TGG | - | chr1_4:16948627-16948646 | None:intergenic | 40.0% | |
TGCATGTTTCCTAACACTTG+TGG | + | chr1_4:16948627-16948646 | Msa0153550:intron | 40.0% | |
! | CATCATCAAAACAGTGTTGG+GGG | - | chr1_4:16948761-16948780 | None:intergenic | 40.0% |
CCATCATCAAAACAGTGTTG+GGG | - | chr1_4:16948762-16948781 | None:intergenic | 40.0% | |
AAATGAACCGCCTCTTGATA+AGG | - | chr1_4:16948946-16948965 | None:intergenic | 40.0% | |
!! | ATTTTGACAAGATAACGGCG+AGG | + | chr1_4:16948962-16948981 | Msa0153550:intron | 40.0% |
CAACAGAAAAGACCTCTCTA+GGG | - | chr1_4:16949311-16949330 | None:intergenic | 40.0% | |
TCAACAGAAAAGACCTCTCT+AGG | - | chr1_4:16949312-16949331 | None:intergenic | 40.0% | |
TCTGTTGAAAGTTGAAGGAG+TGG | + | chr1_4:16949324-16949343 | Msa0153550:CDS | 40.0% | |
ATGATAAAGAGGGTTGCTGT+TGG | + | chr1_4:16949367-16949386 | Msa0153550:CDS | 40.0% | |
AAGAAGCAACTACTCAACTG+AGG | - | chr1_4:16949499-16949518 | None:intergenic | 40.0% | |
CTTCTTAGTGTGCATGAAAG+AGG | + | chr1_4:16949513-16949532 | Msa0153550:CDS | 40.0% | |
GCTGTCATTAGTAAATCTGC+TGG | + | chr1_4:16949574-16949593 | Msa0153550:CDS | 40.0% | |
GTCATTAGTAAATCTGCTGG+AGG | + | chr1_4:16949577-16949596 | Msa0153550:CDS | 40.0% | |
TCCCTGAATGTAACTACCAT+GGG | - | chr1_4:16949632-16949651 | None:intergenic | 40.0% | |
TTCCCTGAATGTAACTACCA+TGG | - | chr1_4:16949633-16949652 | None:intergenic | 40.0% | |
TGATTGAACACACACAGCAT+TGG | - | chr1_4:16949682-16949701 | None:intergenic | 40.0% | |
TCAACTATATCAGCATGCCA+TGG | - | chr1_4:16949754-16949773 | None:intergenic | 40.0% | |
AAAGAGATCAGGCACCAAAA+GGG | - | chr1_4:16949839-16949858 | None:intergenic | 40.0% | |
TAAAGAGATCAGGCACCAAA+AGG | - | chr1_4:16949840-16949859 | None:intergenic | 40.0% | |
!! | TTTGGTGCCTGATCTCTTTA+TGG | + | chr1_4:16949840-16949859 | Msa0153550:CDS | 40.0% |
ATGGAAAGAGTTCAGAGCAA+TGG | + | chr1_4:16949859-16949878 | Msa0153550:CDS | 40.0% | |
TGGAAAGAGTTCAGAGCAAT+GGG | + | chr1_4:16949860-16949879 | Msa0153550:CDS | 40.0% | |
TTATTCAAGCACGGAGTTTG+TGG | + | chr1_4:16949992-16950011 | Msa0153550:intron | 40.0% | |
! | GCATCCCTAAAAAGCATGTA+AGG | - | chr1_4:16950054-16950073 | None:intergenic | 40.0% |
GAAAATCAACCAGCAGAATC+TGG | + | chr1_4:16950083-16950102 | Msa0153550:CDS | 40.0% | |
AAGTCATCAAATCTGTGCAC+TGG | + | chr1_4:16950114-16950133 | Msa0153550:CDS | 40.0% | |
AGTCATCAAATCTGTGCACT+GGG | + | chr1_4:16950115-16950134 | Msa0153550:CDS | 40.0% | |
! | TTTTACACAGCAGTCTCTGT+TGG | - | chr1_4:16950159-16950178 | None:intergenic | 40.0% |
! | GATAGGGAGTGTATTGAACT+TGG | + | chr1_4:16950316-16950335 | Msa0153550:intron | 40.0% |
TCGAACTAAGCAAGCATACT+TGG | - | chr1_4:16950423-16950442 | None:intergenic | 40.0% | |
! | TTCCGAGGAATTTTGTAGAG+AGG | + | chr1_4:16950480-16950499 | Msa0153550:CDS | 40.0% |
CAGACCCATTTGGAAGTTTA+AGG | - | chr1_4:16950535-16950554 | None:intergenic | 40.0% | |
GTCTGCGTGCAAAATGAATT+GGG | + | chr1_4:16950550-16950569 | Msa0153550:CDS | 40.0% | |
TGCAATGCAGTGATGGTATT+TGG | + | chr1_4:16950573-16950592 | Msa0153550:CDS | 40.0% | |
AATCTGACCCTCCTTTGTAT+TGG | - | chr1_4:16950655-16950674 | None:intergenic | 40.0% | |
TTGTGAATGTTACTCCCTTG+AGG | - | chr1_4:16950896-16950915 | None:intergenic | 40.0% | |
GCAACCCAACAAAAAGTTTC+AGG | + | chr1_4:16950935-16950954 | Msa0153550:CDS | 40.0% | |
GTGAAACTAGGACTCTCATT+GGG | - | chr1_4:16951322-16951341 | None:intergenic | 40.0% | |
AGTGAAACTAGGACTCTCAT+TGG | - | chr1_4:16951323-16951342 | None:intergenic | 40.0% | |
TTATCGCCATGTCATGTTGA+AGG | + | chr1_4:16951349-16951368 | Msa0153550:CDS | 40.0% | |
TTTGTACCTAACTGTGTGAG+AGG | + | chr1_4:16951423-16951442 | Msa0153550:intron | 40.0% | |
GAATGAGTTATTGCAAGGGA+AGG | + | chr1_4:16951806-16951825 | Msa0153550:CDS | 40.0% | |
!! | CAGGAGCAGTTTTGTAATGA+GGG | + | chr1_4:16951890-16951909 | Msa0153550:CDS | 40.0% |
TAATACCTTGAAACTGCTCC+GGG | - | chr1_4:16952040-16952059 | None:intergenic | 40.0% | |
TACATAAATAGAGTGGGTCC+AGG | - | chr1_4:16952344-16952363 | None:intergenic | 40.0% | |
GCAGAGACTAATGAAAACAG+AGG | + | chr1_4:16952476-16952495 | Msa0153550:intron | 40.0% | |
GAGACTAATGAAAACAGAGG+AGG | + | chr1_4:16952479-16952498 | Msa0153550:intron | 40.0% | |
TAATGAAAACAGAGGAGGCA+GGG | + | chr1_4:16952484-16952503 | Msa0153550:CDS | 40.0% | |
! | GTATCATCTGTTTCAGGTCA+TGG | - | chr1_4:16952999-16953018 | None:intergenic | 40.0% |
GAATGAGTTATTGCAAGGGA+AGG | + | chr1_4:16951806-16951825 | Msa0153550:CDS | 40.0% | |
!! | AATTAGAAGTGTTGGTGAGG+AGG | + | chr1_4:16951833-16951852 | Msa0153550:CDS | 40.0% |
!! | TGGTTGGAAGTCATTTTCAC+AGG | + | chr1_4:16953155-16953174 | Msa0153550:CDS | 40.0% |
! | CAGGAACATAACTTGCAAGT+CGG | + | chr1_4:16953174-16953193 | Msa0153550:CDS | 40.0% |
TGCTATCATCTCAACCACAA+AGG | + | chr1_4:16953248-16953267 | Msa0153550:CDS | 40.0% | |
CAATACCTTGAAACTTCTCC+GGG | - | chr1_4:16953281-16953300 | None:intergenic | 40.0% | |
GCAATACCTTGAAACTTCTC+CGG | - | chr1_4:16953282-16953301 | None:intergenic | 40.0% | |
CGCAATAAAATAGAGCTTGG+GGG | - | chr1_4:16953509-16953528 | None:intergenic | 40.0% | |
! | CAGTTTCACATGGTTTGGAA+CGG | + | chr1_4:16953668-16953687 | Msa0153550:intron | 40.0% |
CATACATTGGACAGTGTGTA+GGG | - | chr1_4:16953823-16953842 | None:intergenic | 40.0% | |
ACATACATTGGACAGTGTGT+AGG | - | chr1_4:16953824-16953843 | None:intergenic | 40.0% | |
! | GTTTGATGGCACACATACAT+TGG | - | chr1_4:16953836-16953855 | None:intergenic | 40.0% |
ATGTATGTGTGCCATCAAAC+AGG | + | chr1_4:16953836-16953855 | Msa0153550:intron | 40.0% | |
TGTATGTGTGCCATCAAACA+GGG | + | chr1_4:16953837-16953856 | Msa0153550:intron | 40.0% | |
! | TTGTTTCTTCTCTCTGGTAG+TGG | - | chr1_4:16953991-16954010 | None:intergenic | 40.0% |
! | CTGTGATTGTTTCTTCTCTC+TGG | - | chr1_4:16953997-16954016 | None:intergenic | 40.0% |
CAGAGAGAAGAAACAATCAC+AGG | + | chr1_4:16953995-16954014 | Msa0153550:intron | 40.0% | |
GAGATGAGAGATATACAGAG+AGG | + | chr1_4:16954037-16954056 | Msa0153550:intron | 40.0% | |
GTTGTGGGTAGTGTGATTAA+GGG | + | chr1_4:16954297-16954316 | Msa0153550:intron | 40.0% | |
AGGGATCTACTGAAGAAGTT+GGG | - | chr1_4:16954630-16954649 | None:intergenic | 40.0% | |
ACAAGTCCACAAACTTCTCA+GGG | - | chr1_4:16954649-16954668 | None:intergenic | 40.0% | |
GACAACACCCGTAAAAGATA+TGG | + | chr1_4:16954701-16954720 | Msa0153550:CDS | 40.0% | |
! | ATGGAATATGCGGGCAATTT+TGG | + | chr1_4:16954720-16954739 | Msa0153550:CDS | 40.0% |
TACTGCAGATTCTGTAAGTC+TGG | + | chr1_4:16954870-16954889 | Msa0153550:intron | 40.0% | |
AATTCAGTGGAGTTGAGAGT+AGG | + | chr1_4:16955070-16955089 | Msa0153550:CDS | 40.0% | |
ATTCAGTGGAGTTGAGAGTA+GGG | + | chr1_4:16955071-16955090 | Msa0153550:CDS | 40.0% | |
TCACTAAGATACATCCGACA+AGG | + | chr1_4:16955381-16955400 | Msa0153550:intron | 40.0% | |
TAAGATACATCCGACAAGGT+TGG | + | chr1_4:16955385-16955404 | Msa0153550:intron | 40.0% | |
TGATGAACCTTGAGAATTGG+AGG | - | chr1_4:16955444-16955463 | None:intergenic | 40.0% | |
TTTCAACAACAACACGGCAC+CGG | + | chr1_4:16948449-16948468 | Msa0153550:CDS | 45.0% | |
!!! | CCCCAACACTGTTTTGATGA+TGG | + | chr1_4:16948759-16948778 | Msa0153550:intron | 45.0% |
GTCGCTCAGAAAATTTGTGC+CGG | + | chr1_4:16949036-16949055 | Msa0153550:intron | 45.0% | |
AGCAGCCAAGGATGCATAAT+CGG | - | chr1_4:16949113-16949132 | None:intergenic | 45.0% | |
ATTATGCATCCTTGGCTGCT+AGG | + | chr1_4:16949113-16949132 | Msa0153550:CDS | 45.0% | |
CATCAAGAATGCGGCTCAAT+TGG | + | chr1_4:16949231-16949250 | Msa0153550:CDS | 45.0% | |
GAAAGTTGAAGGAGTGGTTG+TGG | + | chr1_4:16949330-16949349 | Msa0153550:CDS | 45.0% | |
CAGCAGATTCAACATCATCC+TGG | - | chr1_4:16949399-16949418 | None:intergenic | 45.0% | |
! | TCTCCTACACTTTTCAACGC+TGG | + | chr1_4:16949463-16949482 | Msa0153550:CDS | 45.0% |
! | GTTCCAGCGTTGAAAAGTGT+AGG | - | chr1_4:16949469-16949488 | None:intergenic | 45.0% |
! | TTTTCAACGCTGGAACACCT+AGG | + | chr1_4:16949473-16949492 | Msa0153550:CDS | 45.0% |
AGTAAATCTGCTGGAGGGAT+TGG | + | chr1_4:16949583-16949602 | Msa0153550:CDS | 45.0% | |
TGCCCATGGTAGTTACATTC+AGG | + | chr1_4:16949627-16949646 | Msa0153550:intron | 45.0% | |
GCCCATGGTAGTTACATTCA+GGG | + | chr1_4:16949628-16949647 | Msa0153550:intron | 45.0% | |
!! | GCACGCTAAGTTGATCAGAA+AGG | + | chr1_4:16949706-16949725 | Msa0153550:intron | 45.0% |
!! | AGGTGCTTTTGCTGTGTACT+TGG | + | chr1_4:16949726-16949745 | Msa0153550:CDS | 45.0% |
!! | ACCTGGTTTGGCAGATTGTT+GGG | + | chr1_4:16949912-16949931 | Msa0153550:CDS | 45.0% |
TAATTGTGCCCAGATTCTGC+TGG | - | chr1_4:16950095-16950114 | None:intergenic | 45.0% | |
TGTTCTTGCAGATGATTCCG+AGG | + | chr1_4:16950465-16950484 | Msa0153550:intron | 45.0% | |
! | ATTTTGCACGCAGACCCATT+TGG | - | chr1_4:16950545-16950564 | None:intergenic | 45.0% |
GGTCTGCGTGCAAAATGAAT+TGG | + | chr1_4:16950549-16950568 | Msa0153550:CDS | 45.0% | |
AATTGGGTGCAATGCAGTGA+TGG | + | chr1_4:16950566-16950585 | Msa0153550:CDS | 45.0% | |
TAATGGAAACACAGGAGGCA+TGG | + | chr1_4:16951240-16951259 | Msa0153550:CDS | 45.0% | |
! | AATGGAAACACAGGAGGCAT+GGG | + | chr1_4:16951241-16951260 | Msa0153550:CDS | 45.0% |
TGAAAGCCTCTCACACAGTT+AGG | - | chr1_4:16951432-16951451 | None:intergenic | 45.0% | |
ATTCGTGCACGAAATGTGCA+AGG | - | chr1_4:16951713-16951732 | None:intergenic | 45.0% | |
! | GTATCGTCTGTTTCAGGTCA+TGG | - | chr1_4:16951761-16951780 | None:intergenic | 45.0% |
!! | TTAGAAGTGTTGGTGAGGAC+AGG | + | chr1_4:16951835-16951854 | Msa0153550:CDS | 45.0% |
!! | TAGAAGTGTTGGTGAGGACA+GGG | + | chr1_4:16951836-16951855 | Msa0153550:CDS | 45.0% |
!! | GCAGGAGCAGTTTTGTAATG+AGG | + | chr1_4:16951889-16951908 | Msa0153550:CDS | 45.0% |
!! | AGCAGTTTTGTAATGAGGGC+TGG | + | chr1_4:16951894-16951913 | Msa0153550:CDS | 45.0% |
!! | GTTTTGTAATGAGGGCTGGT+TGG | + | chr1_4:16951898-16951917 | Msa0153550:CDS | 45.0% |
CTAATGAAAACAGAGGAGGC+AGG | + | chr1_4:16952483-16952502 | Msa0153550:CDS | 45.0% | |
GTGAAGCTAGGGTTCTCATT+GGG | - | chr1_4:16952566-16952585 | None:intergenic | 45.0% | |
AGTGAAGCTAGGGTTCTCAT+TGG | - | chr1_4:16952567-16952586 | None:intergenic | 45.0% | |
TTTGTGCCTAACTGTGTGAG+AGG | + | chr1_4:16952668-16952687 | Msa0153550:intron | 45.0% | |
TGAAAGCCTCTCACACAGTT+AGG | - | chr1_4:16951432-16951451 | None:intergenic | 45.0% | |
TTGGTGAGGAGGATAGAACA+TGG | + | chr1_4:16953082-16953101 | Msa0153550:CDS | 45.0% | |
! | GTTTTCGAATGGGAAGTGGT+TGG | + | chr1_4:16953139-16953158 | Msa0153550:CDS | 45.0% |
ATCTCAACCACAAAGGAACC+AGG | + | chr1_4:16953255-16953274 | Msa0153550:CDS | 45.0% | |
GTTACGGTTACGTCGGATTT+CGG | - | chr1_4:16953593-16953612 | None:intergenic | 45.0% | |
CGAAAGCGGTTCTGTCAAAA+TGG | + | chr1_4:16953692-16953711 | Msa0153550:intron | 45.0% | |
! | CAGTAATAAGTGGACGGGTT+CGG | - | chr1_4:16953730-16953749 | None:intergenic | 45.0% |
!! | TTCTTCTCTCTGGTAGTGGT+GGG | - | chr1_4:16953987-16954006 | None:intergenic | 45.0% |
!! | TTTCTTCTCTCTGGTAGTGG+TGG | - | chr1_4:16953988-16954007 | None:intergenic | 45.0% |
! | TGACGGGTCTAACGGAATAA+CGG | - | chr1_4:16954123-16954142 | None:intergenic | 45.0% |
GACCGTTTCAACGTCAGTTT+CGG | - | chr1_4:16954150-16954169 | None:intergenic | 45.0% | |
GAAACTGACGTTGAAACGGT+CGG | + | chr1_4:16954149-16954168 | Msa0153550:intron | 45.0% | |
AAACTGACGTTGAAACGGTC+GGG | + | chr1_4:16954150-16954169 | Msa0153550:intron | 45.0% | |
TTCTTCGGTGACCAGTTGTT+GGG | + | chr1_4:16954202-16954221 | Msa0153550:intron | 45.0% | |
!! | TGAAGGATATTGGTGGGTTG+TGG | + | chr1_4:16954281-16954300 | Msa0153550:intron | 45.0% |
!! | GAAGGATATTGGTGGGTTGT+GGG | + | chr1_4:16954282-16954301 | Msa0153550:intron | 45.0% |
GGTTGTGGGTAGTGTGATTA+AGG | + | chr1_4:16954296-16954315 | Msa0153550:intron | 45.0% | |
GGGATCTACTGAAGAAGTTG+GGG | - | chr1_4:16954629-16954648 | None:intergenic | 45.0% | |
CAGGGATCTACTGAAGAAGT+TGG | - | chr1_4:16954631-16954650 | None:intergenic | 45.0% | |
GTAGATCCCTGAGAAGTTTG+TGG | + | chr1_4:16954640-16954659 | Msa0153550:intron | 45.0% | |
CACAAGTCCACAAACTTCTC+AGG | - | chr1_4:16954650-16954669 | None:intergenic | 45.0% | |
TGGACTTGTGCAGAAAACCA+AGG | + | chr1_4:16954660-16954679 | Msa0153550:intron | 45.0% | |
!! | TATGCGGGCAATTTTGGAGA+TGG | + | chr1_4:16954726-16954745 | Msa0153550:CDS | 45.0% |
AGGAGCTGCACAAAAACACA+TGG | + | chr1_4:16954756-16954775 | Msa0153550:CDS | 45.0% | |
TGCTTCTTCAACAGCTCACT+TGG | - | chr1_4:16955034-16955053 | None:intergenic | 45.0% | |
AGTGAGCTGTTGAAGAAGCA+TGG | + | chr1_4:16955034-16955053 | Msa0153550:CDS | 45.0% | |
TTCAGTGGAGTTGAGAGTAG+GGG | + | chr1_4:16955072-16955091 | Msa0153550:CDS | 45.0% | |
! | GGAAGGAACATGGTTTGTAG+AGG | + | chr1_4:16955093-16955112 | Msa0153550:CDS | 45.0% |
ATGAACATCTCGACTATGGG+TGG | + | chr1_4:16955125-16955144 | Msa0153550:CDS | 45.0% | |
GACTATGGGTGGTTCACTAA+AGG | + | chr1_4:16955136-16955155 | Msa0153550:CDS | 45.0% | |
!! | TGGAGGAAGCATCATACCTT+AGG | - | chr1_4:16955427-16955446 | None:intergenic | 45.0% |
GATGCTTCCTCCAATTCTCA+AGG | + | chr1_4:16955434-16955453 | Msa0153550:CDS | 45.0% | |
GCGGCTAATTCATCAAGAGC+CGG | - | chr1_4:16949058-16949077 | None:intergenic | 50.0% | |
TGCATAATCGGGGTGGTTAG+CGG | - | chr1_4:16949101-16949120 | None:intergenic | 50.0% | |
CAGCCAAGGATGCATAATCG+GGG | - | chr1_4:16949111-16949130 | None:intergenic | 50.0% | |
GCAGCCAAGGATGCATAATC+GGG | - | chr1_4:16949112-16949131 | None:intergenic | 50.0% | |
AACGGAAATCCTAGCAGCCA+AGG | - | chr1_4:16949125-16949144 | None:intergenic | 50.0% | |
CAACTACTCAACTGAGGCCT+AGG | - | chr1_4:16949493-16949512 | None:intergenic | 50.0% | |
GTTCACAACATACGTGCCCA+TGG | + | chr1_4:16949613-16949632 | Msa0153550:CDS | 50.0% | |
TTGCTGTGTACTTGGAGCCA+TGG | + | chr1_4:16949734-16949753 | Msa0153550:CDS | 50.0% | |
TGCTTCATTGGGGCAGAACA+GGG | - | chr1_4:16949893-16949912 | None:intergenic | 50.0% | |
CCAAACCAGGTGCTTCATTG+GGG | - | chr1_4:16949903-16949922 | None:intergenic | 50.0% | |
GCCAAACCAGGTGCTTCATT+GGG | - | chr1_4:16949904-16949923 | None:intergenic | 50.0% | |
TGCCAAACCAGGTGCTTCAT+TGG | - | chr1_4:16949905-16949924 | None:intergenic | 50.0% | |
!! | CACCTGGTTTGGCAGATTGT+TGG | + | chr1_4:16949911-16949930 | Msa0153550:CDS | 50.0% |
!! | CCTGGTTTGGCAGATTGTTG+GGG | + | chr1_4:16949913-16949932 | Msa0153550:CDS | 50.0% |
ACTACTGCTGCTACACCTCA+AGG | + | chr1_4:16950878-16950897 | Msa0153550:CDS | 50.0% | |
CTACTGCTGCTACACCTCAA+GGG | + | chr1_4:16950879-16950898 | Msa0153550:CDS | 50.0% | |
GCAGAGGCTAATGGAAACAC+AGG | + | chr1_4:16951232-16951251 | Msa0153550:intron | 50.0% | |
GAGGCTAATGGAAACACAGG+AGG | + | chr1_4:16951235-16951254 | Msa0153550:intron | 50.0% | |
GGTCAGATGTGTACGAGCTT+CGG | + | chr1_4:16953628-16953647 | Msa0153550:intron | 50.0% | |
! | TGGTTTGGAACGGACGAAAG+CGG | + | chr1_4:16953678-16953697 | Msa0153550:intron | 50.0% |
TCAAGACACGCCCTGTTTGA+TGG | - | chr1_4:16953850-16953869 | None:intergenic | 50.0% | |
!! | GGTCTAACGGAATAACGGGT+GGG | - | chr1_4:16954118-16954137 | None:intergenic | 50.0% |
GACGGGTCTAACGGAATAAC+GGG | - | chr1_4:16954122-16954141 | None:intergenic | 50.0% | |
GTTTCAACGTCAGTTTCGGC+GGG | - | chr1_4:16954146-16954165 | None:intergenic | 50.0% | |
CGTTTCAACGTCAGTTTCGG+CGG | - | chr1_4:16954147-16954166 | None:intergenic | 50.0% | |
CGCCGAAACTGACGTTGAAA+CGG | + | chr1_4:16954145-16954164 | Msa0153550:intron | 50.0% | |
GTTCTTCGGTGACCAGTTGT+TGG | + | chr1_4:16954201-16954220 | Msa0153550:intron | 50.0% | |
GTGTGTAGAGTGTGTGTTCG+TGG | + | chr1_4:16954321-16954340 | Msa0153550:intron | 50.0% | |
TGAGAGTAGGGGAAGGAACA+TGG | + | chr1_4:16955083-16955102 | Msa0153550:CDS | 50.0% | |
ATGGGTGGTTCACTAAAGGC+TGG | + | chr1_4:16955140-16955159 | Msa0153550:CDS | 50.0% | |
TGCAACTGTGTTCTTCCCGT+TGG | + | chr1_4:16955340-16955359 | Msa0153550:intron | 50.0% | |
ACGTCCATTGTGAATGCCGC+CGG | - | chr1_4:16948471-16948490 | None:intergenic | 55.0% | |
GCGGCATTCACAATGGACGT+GGG | + | chr1_4:16948471-16948490 | Msa0153550:CDS | 55.0% | |
TGGACGTGGGAGTGAAGCTA+AGG | + | chr1_4:16948484-16948503 | Msa0153550:CDS | 55.0% | |
GGACGTGGGAGTGAAGCTAA+GGG | + | chr1_4:16948485-16948504 | Msa0153550:CDS | 55.0% | |
CCAAGGATGCATAATCGGGG+TGG | - | chr1_4:16949108-16949127 | None:intergenic | 55.0% | |
CCACCCCGATTATGCATCCT+TGG | + | chr1_4:16949105-16949124 | Msa0153550:CDS | 55.0% | |
! | GGTTGCTGTTGGAACTCACC+AGG | + | chr1_4:16949378-16949397 | Msa0153550:CDS | 55.0% |
GTGCTTCATTGGGGCAGAAC+AGG | - | chr1_4:16949894-16949913 | None:intergenic | 55.0% | |
! | TTCTGCCCCAATGAAGCACC+TGG | + | chr1_4:16949895-16949914 | Msa0153550:CDS | 55.0% |
! | CCCCAATGAAGCACCTGGTT+TGG | + | chr1_4:16949900-16949919 | Msa0153550:CDS | 55.0% |
CCCCAACAATCTGCCAAACC+AGG | - | chr1_4:16949916-16949935 | None:intergenic | 55.0% | |
TTTGCATGGTCGCTCCGATG+TGG | + | chr1_4:16950614-16950633 | Msa0153550:CDS | 55.0% | |
GGCATGGTTCCTTCGTGGTT+GGG | - | chr1_4:16952019-16952038 | None:intergenic | 55.0% | |
AACCACGAAGGAACCATGCC+CGG | + | chr1_4:16952019-16952038 | Msa0153550:CDS | 55.0% | |
AACCACAAAGGAACCAGGCC+CGG | + | chr1_4:16953260-16953279 | Msa0153550:CDS | 55.0% | |
!! | AGCTTGGGGGACTAGCTGAA+GGG | - | chr1_4:16953496-16953515 | None:intergenic | 55.0% |
CGGTTACGTCGGATTTCGGT+CGG | - | chr1_4:16953589-16953608 | None:intergenic | 55.0% | |
TACAACCGAGCCAAACCACC+CGG | + | chr1_4:16954092-16954111 | Msa0153550:intron | 55.0% | |
!! | TAACGGAATAACGGGTGGGC+CGG | - | chr1_4:16954114-16954133 | None:intergenic | 55.0% |
! | GGGTCTAACGGAATAACGGG+TGG | - | chr1_4:16954119-16954138 | None:intergenic | 55.0% |
GACGTTGAAACGGTCGGGAA+TGG | + | chr1_4:16954155-16954174 | Msa0153550:intron | 55.0% | |
TGACAGTAAGGGGTGAGCAC+CGG | - | chr1_4:16954248-16954267 | None:intergenic | 55.0% | |
GTGGAGTTGAGAGTAGGGGA+AGG | + | chr1_4:16955076-16955095 | Msa0153550:CDS | 55.0% | |
! | CAACAACAACACGGCACCGG+CGG | + | chr1_4:16948452-16948471 | Msa0153550:CDS | 60.0% |
GGCGGCATTCACAATGGACG+TGG | + | chr1_4:16948470-16948489 | Msa0153550:CDS | 60.0% | |
GTGGTTAGCGGTCATGCAGG+CGG | - | chr1_4:16949089-16949108 | None:intergenic | 60.0% | |
! | GTGTTGGTGAGGACAGGGCA+TGG | + | chr1_4:16951841-16951860 | Msa0153550:CDS | 60.0% |
GGGCATGGTTCCTTCGTGGT+TGG | - | chr1_4:16952020-16952039 | None:intergenic | 60.0% | |
CCTTGAAACTGCTCCGGGCA+TGG | - | chr1_4:16952035-16952054 | None:intergenic | 60.0% | |
CCATGCCCGGAGCAGTTTCA+AGG | + | chr1_4:16952032-16952051 | Msa0153550:CDS | 60.0% | |
CCTTGAAACTTCTCCGGGCC+TGG | - | chr1_4:16953276-16953295 | None:intergenic | 60.0% | |
CCAGGCCCGGAGAAGTTTCA+AGG | + | chr1_4:16953273-16953292 | Msa0153550:CDS | 60.0% | |
!! | GAGCTTGGGGGACTAGCTGA+AGG | - | chr1_4:16953497-16953516 | None:intergenic | 60.0% |
!! | AACGGAATAACGGGTGGGCC+GGG | - | chr1_4:16954113-16954132 | None:intergenic | 60.0% |
ACGTCAGTTTCGGCGGGTGA+CGG | - | chr1_4:16954140-16954159 | None:intergenic | 60.0% | |
!! | AGTAAGGGGTGAGCACCGGT+CGG | - | chr1_4:16954244-16954263 | None:intergenic | 60.0% |
!! | GGCACCGGCGGCATTCACAA+TGG | + | chr1_4:16948464-16948483 | Msa0153550:CDS | 65.0% |
CATGCAGGCGGCGGTTTCAG+CGG | - | chr1_4:16949077-16949096 | None:intergenic | 65.0% | |
GTTAGCGGTCATGCAGGCGG+CGG | - | chr1_4:16949086-16949105 | None:intergenic | 65.0% | |
GGGGTGGTTAGCGGTCATGC+AGG | - | chr1_4:16949092-16949111 | None:intergenic | 65.0% | |
CTCCGGGCATGGTTCCTTCG+TGG | - | chr1_4:16952024-16952043 | None:intergenic | 65.0% | |
CTCCGGGCCTGGTTCCTTTG+TGG | - | chr1_4:16953265-16953284 | None:intergenic | 65.0% | |
TCTCACACTTCACGCGCGCG+TGG | - | chr1_4:16953774-16953793 | None:intergenic | 65.0% | |
!! | TCGGCGGGTGACGGGTCTAA+CGG | - | chr1_4:16954131-16954150 | None:intergenic | 65.0% |
CGTCAGTTTCGGCGGGTGAC+GGG | - | chr1_4:16954139-16954158 | None:intergenic | 65.0% | |
! | GGCGGATTCGGCCCAACAAC+TGG | - | chr1_4:16954216-16954235 | None:intergenic | 65.0% |
! | CGGTCGGTTACGGGCGGATT+CGG | - | chr1_4:16954228-16954247 | None:intergenic | 65.0% |
CGAATCCGCCCGTAACCGAC+CGG | + | chr1_4:16954226-16954245 | Msa0153550:intron | 65.0% | |
!! | GGTGAGCACCGGTCGGTTAC+GGG | - | chr1_4:16954237-16954256 | None:intergenic | 65.0% |
!! | GGGTGAGCACCGGTCGGTTA+CGG | - | chr1_4:16954238-16954257 | None:intergenic | 65.0% |
! | GTGGGCCGGGTGGTTTGGCT+CGG | - | chr1_4:16954100-16954119 | None:intergenic | 70.0% |
AACGGGTGGGCCGGGTGGTT+TGG | - | chr1_4:16954105-16954124 | None:intergenic | 70.0% | |
!! | GGAATAACGGGTGGGCCGGG+TGG | - | chr1_4:16954110-16954129 | None:intergenic | 70.0% |
!! | GAGCACCGGTCGGTTACGGG+CGG | - | chr1_4:16954234-16954253 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 16948443 | 16955538 | 16948443 | ID=Msa0153550;Name=Msa0153550 |
chr1_4 | mRNA | 16948443 | 16955538 | 16948443 | ID=Msa0153550-mRNA-1;Parent=Msa0153550;Name=Msa0153550-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0|0|0.92|1|1|13|0|1005 |
chr1_4 | exon | 16948443 | 16948559 | 16948443 | ID=Msa0153550-mRNA-1:exon:6468;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16949037 | 16949634 | 16949037 | ID=Msa0153550-mRNA-1:exon:6469;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16949716 | 16949962 | 16949716 | ID=Msa0153550-mRNA-1:exon:6470;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16950068 | 16950170 | 16950068 | ID=Msa0153550-mRNA-1:exon:6471;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16950476 | 16950956 | 16950476 | ID=Msa0153550-mRNA-1:exon:6472;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16951236 | 16951384 | 16951236 | ID=Msa0153550-mRNA-1:exon:6473;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16951774 | 16952164 | 16951774 | ID=Msa0153550-mRNA-1:exon:6474;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16952480 | 16952628 | 16952480 | ID=Msa0153550-mRNA-1:exon:6475;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16953012 | 16953294 | 16953012 | ID=Msa0153550-mRNA-1:exon:6476;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16954673 | 16954786 | 16954673 | ID=Msa0153550-mRNA-1:exon:6477;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16954878 | 16954912 | 16954878 | ID=Msa0153550-mRNA-1:exon:6478;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16955019 | 16955246 | 16955019 | ID=Msa0153550-mRNA-1:exon:6479;Parent=Msa0153550-mRNA-1 |
chr1_4 | exon | 16955416 | 16955538 | 16955416 | ID=Msa0153550-mRNA-1:exon:6480;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16948443 | 16948559 | 16948443 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16949037 | 16949634 | 16949037 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16949716 | 16949962 | 16949716 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16950068 | 16950170 | 16950068 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16950476 | 16950956 | 16950476 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16951236 | 16951384 | 16951236 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16951774 | 16952164 | 16951774 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16952480 | 16952628 | 16952480 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16953012 | 16953294 | 16953012 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16954673 | 16954786 | 16954673 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16954878 | 16954912 | 16954878 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16955019 | 16955246 | 16955019 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
chr1_4 | CDS | 16955416 | 16955538 | 16955416 | ID=Msa0153550-mRNA-1:cds;Parent=Msa0153550-mRNA-1 |
Gene Sequence |
Protein sequence |