Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156430 | sp|Q8L7R5|CSPLG_ARATH | 48.611 | 72 | 37 | 0 | 18 | 89 | 80 | 151 | 4.05e-17 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156430 | A0A0R0HVL2 | 55.319 | 141 | 12 | 1 | 1 | 90 | 1 | 141 | 1.90e-38 | 136 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0156430 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156430 | MtrunA17_Chr1g0186591 | 64.516 | 62 | 22 | 0 | 29 | 90 | 91 | 152 | 5.44e-25 | 93.2 |
| Msa0156430 | MtrunA17_Chr1g0167831 | 79.452 | 73 | 15 | 0 | 18 | 90 | 80 | 152 | 4.01e-23 | 88.6 |
| Msa0156430 | MtrunA17_Chr1g0167831 | 97.222 | 36 | 1 | 0 | 1 | 36 | 1 | 36 | 3.17e-17 | 73.2 |
| Msa0156430 | MtrunA17_Chr1g0186551 | 61.290 | 62 | 24 | 0 | 29 | 90 | 91 | 152 | 9.81e-23 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0156430 | AT3G23200.2 | 47.945 | 73 | 38 | 0 | 18 | 90 | 53 | 125 | 1.64e-18 | 76.3 |
| Msa0156430 | AT3G23200.1 | 48.611 | 72 | 37 | 0 | 18 | 89 | 80 | 151 | 4.11e-18 | 75.9 |
Find 21 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTAACCAAAGCATTATT+AGG | 0.170267 | 1_4:+22706196 | None:intergenic |
| GATATGGGACATTGCCATTT+TGG | 0.170837 | 1_4:-22706291 | Msa0156430:CDS |
| GGCACACCTGGTACTGTTCT+TGG | 0.204359 | 1_4:-22708374 | Msa0156430:CDS |
| ATCGTTATGCTTACTATTCT+TGG | 0.235622 | 1_4:-22703544 | Msa0156430:CDS |
| TTCTCCTCTCTACTTATATC+AGG | 0.316384 | 1_4:+22703133 | None:intergenic |
| TTTGACACTCCTCTCCAAAA+TGG | 0.331427 | 1_4:+22706277 | None:intergenic |
| GCTGCAGCTTCTGCCTCAGC+TGG | 0.388706 | 1_4:-22706336 | Msa0156430:intron |
| TATTAACCAAAGCATTATTA+GGG | 0.389148 | 1_4:+22706197 | None:intergenic |
| TATCATCCCTAATAATGCTT+TGG | 0.418492 | 1_4:-22706203 | Msa0156430:CDS |
| AGGCAAAAGCAACAGAAATC+TGG | 0.443728 | 1_4:+22706250 | None:intergenic |
| ATGCTTTGGTTAATAGCAGC+AGG | 0.466883 | 1_4:-22706189 | Msa0156430:intron |
| AATGGCAATGTCCCATATCA+TGG | 0.478377 | 1_4:+22706295 | None:intergenic |
| CGATGGAATGAGTGTTACTT+TGG | 0.478714 | 1_4:-22703166 | Msa0156430:CDS |
| GAAAAGATGAAGAATTTCTC+TGG | 0.482389 | 1_4:-22708395 | None:intergenic |
| AAGAATTTCTCTGGCACACC+TGG | 0.503903 | 1_4:-22708386 | Msa0156430:CDS |
| AGAGAAATTGATGAATTCGA+TGG | 0.504865 | 1_4:-22703183 | Msa0156430:CDS |
| ATAGGCTTAGGTGGTTGAAT+CGG | 0.521493 | 1_4:-22703208 | Msa0156430:intron |
| AATTGAGATCCAGCTCATGA+AGG | 0.614269 | 1_4:+22706230 | None:intergenic |
| GTAATAAAAGAAACTGGGTG+TGG | 0.625318 | 1_4:+22708292 | None:intergenic |
| ATCAAACCAAGAACAGTACC+AGG | 0.635152 | 1_4:+22708368 | None:intergenic |
| CAAAACTGTAAGTCCAGCTG+AGG | 0.661899 | 1_4:+22706323 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATTTATAAACTCTTAT+CGG | + | chr1_4:22703620-22703639 | None:intergenic | 10.0% |
| !!! | ATAATTCAGTCATTTATTTT+AGG | - | chr1_4:22703342-22703361 | Msa0156430:intron | 15.0% |
| !! | TATATTTATAAACTCTTATC+GGG | + | chr1_4:22703619-22703638 | None:intergenic | 15.0% |
| !! | ATCAATATTAAAATCAGAAT+GGG | - | chr1_4:22704440-22704459 | Msa0156430:intron | 15.0% |
| !! | TTGAATCAATAACAAACAAT+TGG | + | chr1_4:22703575-22703594 | None:intergenic | 20.0% |
| !! | AAATCACACAATGTTATATT+GGG | + | chr1_4:22703802-22703821 | None:intergenic | 20.0% |
| !! | AAAATCACACAATGTTATAT+TGG | + | chr1_4:22703803-22703822 | None:intergenic | 20.0% |
| !! | ATGATATAGCATCATAAATT+TGG | + | chr1_4:22703970-22703989 | None:intergenic | 20.0% |
| !! | TAAAGTAATTAAAATCAGAC+CGG | + | chr1_4:22704326-22704345 | None:intergenic | 20.0% |
| !! | GATCAATATTAAAATCAGAA+TGG | - | chr1_4:22704439-22704458 | Msa0156430:intron | 20.0% |
| !!! | ACAAGAAAATTGTTATTCTA+GGG | + | chr1_4:22704477-22704496 | None:intergenic | 20.0% |
| !!! | AACAAGAAAATTGTTATTCT+AGG | + | chr1_4:22704478-22704497 | None:intergenic | 20.0% |
| !!! | TATTAACCAAAGCATTATTA+GGG | + | chr1_4:22705341-22705360 | None:intergenic | 20.0% |
| !! | TAATATCATTACAACATACA+AGG | + | chr1_4:22705694-22705713 | None:intergenic | 20.0% |
| !!! | GGTTTTTCAATATTATAGAT+AGG | - | chr1_4:22705741-22705760 | Msa0156430:intron | 20.0% |
| !!! | TTACTATGATGGTTTTAAAA+GGG | - | chr1_4:22707088-22707107 | Msa0156430:intron | 20.0% |
| !!! | ATTTGAAACCATTTTTTACT+CGG | - | chr1_4:22707176-22707195 | Msa0156430:intron | 20.0% |
| !! | AAGTTCAATAAATAAAAGAC+AGG | + | chr1_4:22707387-22707406 | None:intergenic | 20.0% |
| !!! | TGTTTATTTGCATTTTGTTT+TGG | - | chr1_4:22707463-22707482 | Msa0156430:intron | 20.0% |
| !!! | TTTTTGTTTTGTTGTTTATC+TGG | - | chr1_4:22707610-22707629 | Msa0156430:intron | 20.0% |
| !!! | ACTAGCTTAATTATTAAGAT+TGG | - | chr1_4:22707651-22707670 | Msa0156430:intron | 20.0% |
| !! | CTAGCTTAATTATTAAGATT+GGG | - | chr1_4:22707652-22707671 | Msa0156430:intron | 20.0% |
| !! | ACTATACTAATACTTCTATA+TGG | - | chr1_4:22708096-22708115 | Msa0156430:intron | 20.0% |
| !! | TCTTTTATTACACGTCATTT+TGG | - | chr1_4:22703255-22703274 | Msa0156430:intron | 25.0% |
| ! | GAGATCGTTTAATATTGAAT+TGG | - | chr1_4:22703433-22703452 | Msa0156430:intron | 25.0% |
| !!! | GTTTGTTATTGATTCAAGTT+AGG | - | chr1_4:22703578-22703597 | Msa0156430:CDS | 25.0% |
| ! | TAACTCATCATTACAAAATC+GGG | + | chr1_4:22703643-22703662 | None:intergenic | 25.0% |
| ! | CTAACTCATCATTACAAAAT+CGG | + | chr1_4:22703644-22703663 | None:intergenic | 25.0% |
| !! | CCCATGTAAGATTTTATATT+GGG | + | chr1_4:22703668-22703687 | None:intergenic | 25.0% |
| ! | CCCAATATAAAATCTTACAT+GGG | - | chr1_4:22703665-22703684 | Msa0156430:intron | 25.0% |
| !! | TCCCATGTAAGATTTTATAT+TGG | + | chr1_4:22703669-22703688 | None:intergenic | 25.0% |
| ! | GTGTCTTAATTCACATTAAT+TGG | - | chr1_4:22703852-22703871 | Msa0156430:intron | 25.0% |
| ! | TTAATTCACATTAATTGGTG+TGG | - | chr1_4:22703857-22703876 | Msa0156430:intron | 25.0% |
| ! | TATAGCATCATAAATTTGGT+AGG | + | chr1_4:22703966-22703985 | None:intergenic | 25.0% |
| ! | AAGGTGATTAATGATTCATT+TGG | + | chr1_4:22704156-22704175 | None:intergenic | 25.0% |
| ! | AAATGAATCATTAATCACCT+TGG | - | chr1_4:22704155-22704174 | Msa0156430:intron | 25.0% |
| ! | TATCAGTGATTATTCTGTTT+AGG | + | chr1_4:22704365-22704384 | None:intergenic | 25.0% |
| ! | AGAATAATCACTGATAAGTA+TGG | - | chr1_4:22704369-22704388 | Msa0156430:intron | 25.0% |
| !!! | ATGGAATTAAGCTTTAAATC+AGG | - | chr1_4:22704388-22704407 | Msa0156430:intron | 25.0% |
| ! | TCAAGAAACTGTAAAAACAA+AGG | + | chr1_4:22704640-22704659 | None:intergenic | 25.0% |
| ! | AAACAGTTTCACAAATTCTA+AGG | + | chr1_4:22704893-22704912 | None:intergenic | 25.0% |
| !! | TAGAATTTGTGAAACTGTTT+TGG | - | chr1_4:22704893-22704912 | Msa0156430:intron | 25.0% |
| !!! | AAGTTACAAGTTGTTTTCAT+AGG | + | chr1_4:22704992-22705011 | None:intergenic | 25.0% |
| !!! | AATCAAACTTAAGTCTTGTT+TGG | + | chr1_4:22705130-22705149 | None:intergenic | 25.0% |
| !! | CTATTAACCAAAGCATTATT+AGG | + | chr1_4:22705342-22705361 | None:intergenic | 25.0% |
| !! | TATACATTCTGAAAGAATGT+TGG | + | chr1_4:22705551-22705570 | None:intergenic | 25.0% |
| !! | TTCTAGTTGAATTGAAGAAA+TGG | + | chr1_4:22705617-22705636 | None:intergenic | 25.0% |
| !!! | ATTTTCTCTTATTTTTGCAG+AGG | + | chr1_4:22706100-22706119 | None:intergenic | 25.0% |
| !! | CTCTAATTTTTCTGTCTTAT+AGG | + | chr1_4:22706280-22706299 | None:intergenic | 25.0% |
| ! | TTACAGATAAAGTACGTAAT+GGG | - | chr1_4:22706329-22706348 | Msa0156430:CDS | 25.0% |
| ! | ATATCCCAAAAAAAATCATG+GGG | + | chr1_4:22706368-22706387 | None:intergenic | 25.0% |
| ! | CATATCCCAAAAAAAATCAT+GGG | + | chr1_4:22706369-22706388 | None:intergenic | 25.0% |
| !! | TTGTAGTGATTCTAATTTTG+TGG | - | chr1_4:22706743-22706762 | Msa0156430:intron | 25.0% |
| !! | TGTAGTGATTCTAATTTTGT+GGG | - | chr1_4:22706744-22706763 | Msa0156430:intron | 25.0% |
| ! | GGTTCATTGAATATTAAGTT+AGG | - | chr1_4:22706765-22706784 | Msa0156430:intron | 25.0% |
| ! | AGCATCAACATAAAATAGAT+AGG | + | chr1_4:22706939-22706958 | None:intergenic | 25.0% |
| ! | AAAGAACTATTAATCGAACA+TGG | + | chr1_4:22707039-22707058 | None:intergenic | 25.0% |
| ! | CGATTAATAGTTCTTTCAAA+TGG | - | chr1_4:22707043-22707062 | Msa0156430:intron | 25.0% |
| !!! | CTTACTATGATGGTTTTAAA+AGG | - | chr1_4:22707087-22707106 | Msa0156430:intron | 25.0% |
| ! | TAAGCAATATAAAACTACAC+TGG | - | chr1_4:22707232-22707251 | Msa0156430:intron | 25.0% |
| ! | ATGAATAATGAAGTGTACAT+AGG | + | chr1_4:22707335-22707354 | None:intergenic | 25.0% |
| !!! | TTATCTGGTTTTATTCAAGT+TGG | - | chr1_4:22707625-22707644 | Msa0156430:intron | 25.0% |
| !!! | TATCTGGTTTTATTCAAGTT+GGG | - | chr1_4:22707626-22707645 | Msa0156430:intron | 25.0% |
| ! | GAAAACAAAAATCCTGTAAT+AGG | + | chr1_4:22707857-22707876 | None:intergenic | 25.0% |
| GACGTGTAATAAAAGAAACT+GGG | + | chr1_4:22703251-22703270 | None:intergenic | 30.0% | |
| TGACGTGTAATAAAAGAAAC+TGG | + | chr1_4:22703252-22703271 | None:intergenic | 30.0% | |
| AGGTAAATGAGATATGAAGT+GGG | + | chr1_4:22703292-22703311 | None:intergenic | 30.0% | |
| TAGGTAAATGAGATATGAAG+TGG | + | chr1_4:22703293-22703312 | None:intergenic | 30.0% | |
| !! | CTTAGTCATTGATTCAAGAT+CGG | + | chr1_4:22703482-22703501 | None:intergenic | 30.0% |
| ACACATGATATGATGAATGA+TGG | + | chr1_4:22703549-22703568 | None:intergenic | 30.0% | |
| ! | CGATTTTGTAATGATGAGTT+AGG | - | chr1_4:22703642-22703661 | Msa0156430:intron | 30.0% |
| GCCCAATATAAAATCTTACA+TGG | - | chr1_4:22703664-22703683 | Msa0156430:intron | 30.0% | |
| ! | ATTGTGTGATTTTGTTGCAA+TGG | - | chr1_4:22703810-22703829 | Msa0156430:intron | 30.0% |
| GATTAATGATTCATTTGGAC+CGG | + | chr1_4:22704151-22704170 | None:intergenic | 30.0% | |
| !! | GTTTTGATGCTTCTTTTTAG+TGG | + | chr1_4:22704208-22704227 | None:intergenic | 30.0% |
| !! | CTAAAAAGAAGCATCAAAAC+CGG | - | chr1_4:22704208-22704227 | Msa0156430:intron | 30.0% |
| ! | GCTTTAAATCAGGATAAAGA+AGG | - | chr1_4:22704398-22704417 | Msa0156430:intron | 30.0% |
| ATAAAGAAGGTTGTTTGCAA+AGG | - | chr1_4:22704411-22704430 | Msa0156430:intron | 30.0% | |
| ! | TAAGATTTTCCACATAAGCA+TGG | + | chr1_4:22704605-22704624 | None:intergenic | 30.0% |
| TGTAAAAACAAAGGAACAGT+TGG | + | chr1_4:22704631-22704650 | None:intergenic | 30.0% | |
| !! | TCATATGGAGTTTTATGCTT+TGG | - | chr1_4:22704681-22704700 | Msa0156430:intron | 30.0% |
| TTATGCTTTGGTGAAAAAGA+AGG | - | chr1_4:22704693-22704712 | Msa0156430:intron | 30.0% | |
| TTGCGTCTAACAAACTAATT+AGG | + | chr1_4:22704794-22704813 | None:intergenic | 30.0% | |
| !! | ATTAGTTTGTTAGACGCAAT+AGG | - | chr1_4:22704795-22704814 | Msa0156430:intron | 30.0% |
| !!! | TAACAAAGGCTTGTTTTGAT+TGG | - | chr1_4:22704845-22704864 | Msa0156430:intron | 30.0% |
| !! | AGGTAATTTTGAAGAGCTTA+TGG | + | chr1_4:22704972-22704991 | None:intergenic | 30.0% |
| !! | AGTTTTGTACTTCCATGATA+TGG | - | chr1_4:22705228-22705247 | Msa0156430:intron | 30.0% |
| ! | GTTTTGTACTTCCATGATAT+GGG | - | chr1_4:22705229-22705248 | Msa0156430:intron | 30.0% |
| TATCATCCCTAATAATGCTT+TGG | - | chr1_4:22705332-22705351 | Msa0156430:intron | 30.0% | |
| ! | ATTCTGAAAGAATGTTGGAT+GGG | + | chr1_4:22705546-22705565 | None:intergenic | 30.0% |
| CCAATTACATGCAAAAGATA+AGG | + | chr1_4:22705723-22705742 | None:intergenic | 30.0% | |
| ! | CCTTATCTTTTGCATGTAAT+TGG | - | chr1_4:22705720-22705739 | Msa0156430:intron | 30.0% |
| !! | TTGGTATTGGTATGTATTCT+TGG | - | chr1_4:22705933-22705952 | Msa0156430:intron | 30.0% |
| TTAAAATCAAAATAGTCGCC+AGG | + | chr1_4:22705996-22706015 | None:intergenic | 30.0% | |
| ! | TCATGTTAAGAATTTGCTTG+AGG | + | chr1_4:22706181-22706200 | None:intergenic | 30.0% |
| GTTACAGATAAAGTACGTAA+TGG | - | chr1_4:22706328-22706347 | Msa0156430:CDS | 30.0% | |
| !! | AAAGTACGTAATGGGTAATT+TGG | - | chr1_4:22706337-22706356 | Msa0156430:intron | 30.0% |
| !!! | TCATACCCCATGATTTTTTT+TGG | - | chr1_4:22706360-22706379 | Msa0156430:intron | 30.0% |
| !!! | CATACCCCATGATTTTTTTT+GGG | - | chr1_4:22706361-22706380 | Msa0156430:intron | 30.0% |
| CCATATCCCAAAAAAAATCA+TGG | + | chr1_4:22706370-22706389 | None:intergenic | 30.0% | |
| !!! | CCATGATTTTTTTTGGGATA+TGG | - | chr1_4:22706367-22706386 | Msa0156430:intron | 30.0% |
| ! | TCATTGGTTAATTACTCTCT+AGG | - | chr1_4:22706473-22706492 | Msa0156430:intron | 30.0% |
| ! | CATTGGTTAATTACTCTCTA+GGG | - | chr1_4:22706474-22706493 | Msa0156430:intron | 30.0% |
| TCTAACTATCAACAGAACAT+GGG | + | chr1_4:22706668-22706687 | None:intergenic | 30.0% | |
| TTCTAACTATCAACAGAACA+TGG | + | chr1_4:22706669-22706688 | None:intergenic | 30.0% | |
| TTAGAATCACTACAAGAGTT+TGG | + | chr1_4:22706738-22706757 | None:intergenic | 30.0% | |
| ! | TCACAATTCTAGCTGAAAAA+GGG | + | chr1_4:22706794-22706813 | None:intergenic | 30.0% |
| ! | ATCACAATTCTAGCTGAAAA+AGG | + | chr1_4:22706795-22706814 | None:intergenic | 30.0% |
| TAGTAATCTGTGACATGTTT+AGG | - | chr1_4:22706963-22706982 | Msa0156430:intron | 30.0% | |
| !!! | CATGTTTAGGAGATTTTTTC+TGG | - | chr1_4:22706976-22706995 | Msa0156430:intron | 30.0% |
| AGTTCTTTCAAATGGAAATG+TGG | - | chr1_4:22707051-22707070 | Msa0156430:intron | 30.0% | |
| TAATGAATGGCTTACTATGA+TGG | - | chr1_4:22707077-22707096 | Msa0156430:intron | 30.0% | |
| GAAAAGAACCGAGTAAAAAA+TGG | + | chr1_4:22707187-22707206 | None:intergenic | 30.0% | |
| CAAATATAAGCACAAACATC+AGG | + | chr1_4:22707273-22707292 | None:intergenic | 30.0% | |
| !!! | ATCTGGTTTTATTCAAGTTG+GGG | - | chr1_4:22707627-22707646 | Msa0156430:intron | 30.0% |
| ACAGAAGGATAAGAAAATGT+TGG | + | chr1_4:22707791-22707810 | None:intergenic | 30.0% | |
| !!! | TTCTCAATCTGTTTTTCAAG+TGG | - | chr1_4:22707817-22707836 | Msa0156430:intron | 30.0% |
| AACAAAAATCCTGTAATAGG+TGG | + | chr1_4:22707854-22707873 | None:intergenic | 30.0% | |
| ! | ACTACCTTTTCGTTTTCTTA+AGG | - | chr1_4:22707922-22707941 | Msa0156430:intron | 30.0% |
| ATCGTTATGCTTACTATTCT+TGG | - | chr1_4:22707991-22708010 | Msa0156430:intron | 30.0% | |
| !! | TAGAAGCATCAGTACATAAT+TGG | + | chr1_4:22708075-22708094 | None:intergenic | 30.0% |
| TTGAGGAGGAAATAAACAAA+AGG | + | chr1_4:22708220-22708239 | None:intergenic | 30.0% | |
| AATCCCTTTATTCAGATTTG+AGG | + | chr1_4:22708237-22708256 | None:intergenic | 30.0% | |
| ! | TTCAGTTGTGTTTTCGTTAT+AGG | - | chr1_4:22708309-22708328 | Msa0156430:CDS | 30.0% |
| AGAGAAATTGATGAATTCGA+TGG | - | chr1_4:22708352-22708371 | Msa0156430:CDS | 30.0% | |
| !! | TCACAGTTCATTTTTGCTAC+TGG | - | chr1_4:22703200-22703219 | Msa0156430:CDS | 35.0% |
| GTAATAAAAGAAACTGGGTG+TGG | + | chr1_4:22703246-22703265 | None:intergenic | 35.0% | |
| !! | GATATGATGAATGATGGATC+TGG | + | chr1_4:22703543-22703562 | None:intergenic | 35.0% |
| ! | TTGATTCAAGTTAGGTCCAT+CGG | - | chr1_4:22703586-22703605 | Msa0156430:CDS | 35.0% |
| !! | GTGTATATAAATGGTGGGTA+TGG | + | chr1_4:22703711-22703730 | None:intergenic | 35.0% |
| ACTAGGTGCGTGTATATAAA+TGG | + | chr1_4:22703720-22703739 | None:intergenic | 35.0% | |
| CCTTACAAAACCGGATTATA+AGG | + | chr1_4:22703769-22703788 | None:intergenic | 35.0% | |
| !! | CCTTATAATCCGGTTTTGTA+AGG | - | chr1_4:22703766-22703785 | Msa0156430:intron | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | + | chr1_4:22703778-22703797 | None:intergenic | 35.0% | |
| GATACTTCATTGTGTTGCAA+TGG | - | chr1_4:22703904-22703923 | Msa0156430:intron | 35.0% | |
| GAGTAAGAGTGAGTAAGAAA+AGG | + | chr1_4:22704002-22704021 | None:intergenic | 35.0% | |
| TAATCACCTTGGCAGAAAAT+CGG | - | chr1_4:22704166-22704185 | Msa0156430:intron | 35.0% | |
| ! | TTTTCTTAACCGAGACAAAC+CGG | + | chr1_4:22704251-22704270 | None:intergenic | 35.0% |
| TTCCACATAAGCATGGTTAT+TGG | + | chr1_4:22704598-22704617 | None:intergenic | 35.0% | |
| CAATGGCGTTACAAATCATA+TGG | - | chr1_4:22704666-22704685 | Msa0156430:intron | 35.0% | |
| CAAAGAGGCTAATCAATACA+GGG | + | chr1_4:22704729-22704748 | None:intergenic | 35.0% | |
| ACAAAGAGGCTAATCAATAC+AGG | + | chr1_4:22704730-22704749 | None:intergenic | 35.0% | |
| !! | TTGATTAGCCTCTTTGTTGT+TGG | - | chr1_4:22704733-22704752 | Msa0156430:intron | 35.0% |
| !! | GACGCTTATCGTTTTAACAA+AGG | - | chr1_4:22704831-22704850 | Msa0156430:intron | 35.0% |
| TAAGTTTGATTCTTGACCAC+TGG | - | chr1_4:22705139-22705158 | Msa0156430:intron | 35.0% | |
| GGTTAGCAGACCAAAATTAT+CGG | - | chr1_4:22705367-22705386 | Msa0156430:intron | 35.0% | |
| GTTAGCAGACCAAAATTATC+GGG | - | chr1_4:22705368-22705387 | Msa0156430:intron | 35.0% | |
| !! | ATATACCAGGTGAGAGTATT+TGG | - | chr1_4:22705447-22705466 | Msa0156430:intron | 35.0% |
| !! | TATACCAGGTGAGAGTATTT+GGG | - | chr1_4:22705448-22705467 | Msa0156430:intron | 35.0% |
| TATAACACCACATCGAACAT+TGG | + | chr1_4:22705492-22705511 | None:intergenic | 35.0% | |
| ! | CATTCTGAAAGAATGTTGGA+TGG | + | chr1_4:22705547-22705566 | None:intergenic | 35.0% |
| ! | GTTTTCTTCCCATTGACAAT+CGG | + | chr1_4:22705652-22705671 | None:intergenic | 35.0% |
| TTGTTACATCATTGCACTGT+GGG | + | chr1_4:22705790-22705809 | None:intergenic | 35.0% | |
| TTTGTTACATCATTGCACTG+TGG | + | chr1_4:22705791-22705810 | None:intergenic | 35.0% | |
| !! | CTTTTAGAAATTTTGCCGCA+CGG | - | chr1_4:22705853-22705872 | Msa0156430:intron | 35.0% |
| !! | TTCGTTTCATGCTTGGTTTT+TGG | - | chr1_4:22705914-22705933 | Msa0156430:intron | 35.0% |
| !!! | TCATGCTTGGTTTTTGGTAT+TGG | - | chr1_4:22705920-22705939 | Msa0156430:intron | 35.0% |
| ATTGGTATGTATTCTTGGAC+AGG | - | chr1_4:22705938-22705957 | Msa0156430:intron | 35.0% | |
| TTGGTATGTATTCTTGGACA+GGG | - | chr1_4:22705939-22705958 | Msa0156430:intron | 35.0% | |
| ! | GTTAAGAATTTGCTTGAGGT+TGG | + | chr1_4:22706177-22706196 | None:intergenic | 35.0% |
| ! | GTGTGAGATCTGATTCATTT+TGG | + | chr1_4:22706211-22706230 | None:intergenic | 35.0% |
| TTATAGGAATGCAAGGAGAA+AGG | + | chr1_4:22706264-22706283 | None:intergenic | 35.0% | |
| TTCTGTCTTATAGGAATGCA+AGG | + | chr1_4:22706271-22706290 | None:intergenic | 35.0% | |
| CGAAATAACAAATGGGCATT+TGG | + | chr1_4:22706444-22706463 | None:intergenic | 35.0% | |
| GCGAAGACGAAATAACAAAT+GGG | + | chr1_4:22706451-22706470 | None:intergenic | 35.0% | |
| TGCGAAGACGAAATAACAAA+TGG | + | chr1_4:22706452-22706471 | None:intergenic | 35.0% | |
| TATTTCGTCTTCGCATTCAT+TGG | - | chr1_4:22706457-22706476 | Msa0156430:intron | 35.0% | |
| ! | TGAAGCGGAAATTTCAGTTT+TGG | + | chr1_4:22706516-22706535 | None:intergenic | 35.0% |
| ! | TTCCGCTTCATATTTAAGAC+TGG | - | chr1_4:22706526-22706545 | Msa0156430:intron | 35.0% |
| ! | TCCGCTTCATATTTAAGACT+GGG | - | chr1_4:22706527-22706546 | Msa0156430:intron | 35.0% |
| TCCCAGTCTTAAATATGAAG+CGG | + | chr1_4:22706531-22706550 | None:intergenic | 35.0% | |
| ! | CATATTTAAGACTGGGAAGA+AGG | - | chr1_4:22706534-22706553 | Msa0156430:intron | 35.0% |
| !! | CTCTGTGCAACTTTGATTTT+CGG | - | chr1_4:22706569-22706588 | Msa0156430:intron | 35.0% |
| TCAATTTCCTGCAATTTCAG+TGG | + | chr1_4:22706616-22706635 | None:intergenic | 35.0% | |
| TGAAATTGCAGGAAATTGAC+TGG | - | chr1_4:22706617-22706636 | Msa0156430:intron | 35.0% | |
| TCAACCTACAGAACAATAAC+AGG | + | chr1_4:22706885-22706904 | None:intergenic | 35.0% | |
| !!! | TAGGAGATTTTTTCTGGAAC+AGG | - | chr1_4:22706982-22707001 | Msa0156430:intron | 35.0% |
| !!! | AGGAGATTTTTTCTGGAACA+GGG | - | chr1_4:22706983-22707002 | Msa0156430:intron | 35.0% |
| !! | GGAAATGTGGCTTTAATGAA+TGG | - | chr1_4:22707064-22707083 | Msa0156430:intron | 35.0% |
| ! | TGTGATAATGATCGAGTTTC+TGG | - | chr1_4:22707291-22707310 | Msa0156430:intron | 35.0% |
| ! | TCTTATTTCCGTCTGTGATA+TGG | - | chr1_4:22707415-22707434 | Msa0156430:intron | 35.0% |
| CTTATTTCCGTCTGTGATAT+GGG | - | chr1_4:22707416-22707435 | Msa0156430:intron | 35.0% | |
| TAATATTGTTGTCTGCGAAG+AGG | - | chr1_4:22707683-22707702 | Msa0156430:intron | 35.0% | |
| AATATTGTTGTCTGCGAAGA+GGG | - | chr1_4:22707684-22707703 | Msa0156430:intron | 35.0% | |
| GTTGGTCACATTTCAAAAGT+AGG | + | chr1_4:22707773-22707792 | None:intergenic | 35.0% | |
| ATGCTAAATCCACCTATTAC+AGG | - | chr1_4:22707842-22707861 | Msa0156430:intron | 35.0% | |
| ACAGCCTTAAGAAAACGAAA+AGG | + | chr1_4:22707929-22707948 | None:intergenic | 35.0% | |
| AAATGAGGCAACTTTATGCA+GGG | + | chr1_4:22708158-22708177 | None:intergenic | 35.0% | |
| AAAATGAGGCAACTTTATGC+AGG | + | chr1_4:22708159-22708178 | None:intergenic | 35.0% | |
| TTCCTATGAGTGAGAAAATG+AGG | + | chr1_4:22708173-22708192 | None:intergenic | 35.0% | |
| GTCGTTGCTGAAATTCAAAT+TGG | + | chr1_4:22708198-22708217 | None:intergenic | 35.0% | |
| TCCTCCTCAAATCTGAATAA+AGG | - | chr1_4:22708230-22708249 | Msa0156430:intron | 35.0% | |
| CCTCCTCAAATCTGAATAAA+GGG | - | chr1_4:22708231-22708250 | Msa0156430:intron | 35.0% | |
| ! | TGTGTTTTCGTTATAGGCTT+AGG | - | chr1_4:22708315-22708334 | Msa0156430:CDS | 35.0% |
| ATCAAACCAAGAACAGTACC+AGG | + | chr1_4:22703170-22703189 | None:intergenic | 40.0% | |
| TAAGATTGATTACAGCTGCG+TGG | - | chr1_4:22703498-22703517 | Msa0156430:intron | 40.0% | |
| AAGTTAGGTCCATCGGATAT+AGG | - | chr1_4:22703593-22703612 | Msa0156430:CDS | 40.0% | |
| GGTGCGTGTATATAAATGGT+GGG | + | chr1_4:22703716-22703735 | None:intergenic | 40.0% | |
| AGGTGCGTGTATATAAATGG+TGG | + | chr1_4:22703717-22703736 | None:intergenic | 40.0% | |
| !! | ACGCACCTAGTCTTATAAAG+AGG | - | chr1_4:22703729-22703748 | Msa0156430:intron | 40.0% |
| CCTCTCCTCTTTATAAGACT+AGG | + | chr1_4:22703737-22703756 | None:intergenic | 40.0% | |
| !! | CCTAGTCTTATAAAGAGGAG+AGG | - | chr1_4:22703734-22703753 | Msa0156430:intron | 40.0% |
| ACTCACTCTTACTCTGTAGT+TGG | - | chr1_4:22704008-22704027 | Msa0156430:intron | 40.0% | |
| CAGTCAGGTTCAGATTACAA+TGG | + | chr1_4:22704103-22704122 | None:intergenic | 40.0% | |
| TAATCTGAACCTGACTGATC+CGG | - | chr1_4:22704106-22704125 | Msa0156430:intron | 40.0% | |
| !! | GCTTCTTTTTAGTGGTTTCC+TGG | + | chr1_4:22704200-22704219 | None:intergenic | 40.0% |
| AGAAGGTTGTTTGCAAAGGA+TGG | - | chr1_4:22704415-22704434 | Msa0156430:intron | 40.0% | |
| ! | GCATGCTTTTAACACTGTCA+GGG | + | chr1_4:22704529-22704548 | None:intergenic | 40.0% |
| ! | AGCATGCTTTTAACACTGTC+AGG | + | chr1_4:22704530-22704549 | None:intergenic | 40.0% |
| CACCAATAACCATGCTTATG+TGG | - | chr1_4:22704593-22704612 | Msa0156430:intron | 40.0% | |
| !! | CAGTTTCTTGATAGCGTCAA+TGG | - | chr1_4:22704649-22704668 | Msa0156430:intron | 40.0% |
| !! | CCTCTTTGTTGTTGGAGATT+GGG | - | chr1_4:22704741-22704760 | Msa0156430:intron | 40.0% |
| ! | GATATTGTTGCTGTTACCTG+TGG | + | chr1_4:22705175-22705194 | None:intergenic | 40.0% |
| AATGGCAATGTCCCATATCA+TGG | + | chr1_4:22705243-22705262 | None:intergenic | 40.0% | |
| !! | GATATGGGACATTGCCATTT+TGG | - | chr1_4:22705244-22705263 | Msa0156430:intron | 40.0% |
| TTTGACACTCCTCTCCAAAA+TGG | + | chr1_4:22705261-22705280 | None:intergenic | 40.0% | |
| AGGCAAAAGCAACAGAAATC+TGG | + | chr1_4:22705288-22705307 | None:intergenic | 40.0% | |
| AATTGAGATCCAGCTCATGA+AGG | + | chr1_4:22705308-22705327 | None:intergenic | 40.0% | |
| ATGCTTTGGTTAATAGCAGC+AGG | - | chr1_4:22705346-22705365 | Msa0156430:intron | 40.0% | |
| TAGAAGTGGTAGAGAAGATC+CGG | + | chr1_4:22705395-22705414 | None:intergenic | 40.0% | |
| CACCTGGTATATCAATCCAA+CGG | + | chr1_4:22705439-22705458 | None:intergenic | 40.0% | |
| AAAACCCAAATACTCTCACC+TGG | + | chr1_4:22705455-22705474 | None:intergenic | 40.0% | |
| CGAACATTGGACTAATCAAC+TGG | + | chr1_4:22705479-22705498 | None:intergenic | 40.0% | |
| ! | GATTAGTCCAATGTTCGATG+TGG | - | chr1_4:22705482-22705501 | Msa0156430:intron | 40.0% |
| AACTAACTACATAAGCCGTG+CGG | + | chr1_4:22705871-22705890 | None:intergenic | 40.0% | |
| TCTGTTTGACCCTCATACAT+CGG | - | chr1_4:22705890-22705909 | Msa0156430:intron | 40.0% | |
| GAAACGAAACCGATGTATGA+GGG | + | chr1_4:22705902-22705921 | None:intergenic | 40.0% | |
| TGAAACGAAACCGATGTATG+AGG | + | chr1_4:22705903-22705922 | None:intergenic | 40.0% | |
| TGGTATGTATTCTTGGACAG+GGG | - | chr1_4:22705940-22705959 | Msa0156430:intron | 40.0% | |
| ATGAATCAGATCTCACACAC+TGG | - | chr1_4:22706213-22706232 | Msa0156430:CDS | 40.0% | |
| ! | AACAAGCACTGCAAATCACT+TGG | + | chr1_4:22706311-22706330 | None:intergenic | 40.0% |
| GGGATATGGAGAATTGAACT+CGG | - | chr1_4:22706381-22706400 | Msa0156430:intron | 40.0% | |
| GGATATGGAGAATTGAACTC+GGG | - | chr1_4:22706382-22706401 | Msa0156430:intron | 40.0% | |
| !! | AGCGGAAATTTCAGTTTTGG+CGG | + | chr1_4:22706513-22706532 | None:intergenic | 40.0% |
| TTATCTGCCACTGAAATTGC+AGG | - | chr1_4:22706606-22706625 | Msa0156430:intron | 40.0% | |
| CAGTCCTGTTATTGTTCTGT+AGG | - | chr1_4:22706878-22706897 | Msa0156430:intron | 40.0% | |
| AAACTACACTGGCATGATGA+TGG | - | chr1_4:22707243-22707262 | Msa0156430:intron | 40.0% | |
| !! | ATGATCGAGTTTCTGGTGAT+TGG | - | chr1_4:22707298-22707317 | Msa0156430:intron | 40.0% |
| CTTTCTTCCCATATCACAGA+CGG | + | chr1_4:22707426-22707445 | None:intergenic | 40.0% | |
| ! | CGAAATCCCATTTTGTGACA+AGG | - | chr1_4:22707539-22707558 | Msa0156430:intron | 40.0% |
| GTCATGCCTTGTCACAAAAT+GGG | + | chr1_4:22707548-22707567 | None:intergenic | 40.0% | |
| TGTCATGCCTTGTCACAAAA+TGG | + | chr1_4:22707549-22707568 | None:intergenic | 40.0% | |
| ! | GATTGAGAAGTGCAAACAGA+AGG | + | chr1_4:22707806-22707825 | None:intergenic | 40.0% |
| AATGAGGCAACTTTATGCAG+GGG | + | chr1_4:22708157-22708176 | None:intergenic | 40.0% | |
| ! | TGCCTCATTTTCTCACTCAT+AGG | - | chr1_4:22708168-22708187 | Msa0156430:intron | 40.0% |
| CCCTTTATTCAGATTTGAGG+AGG | + | chr1_4:22708234-22708253 | None:intergenic | 40.0% | |
| ! | GTTTTCGTTATAGGCTTAGG+TGG | - | chr1_4:22708318-22708337 | Msa0156430:CDS | 40.0% |
| ATAGGCTTAGGTGGTTGAAT+CGG | - | chr1_4:22708327-22708346 | Msa0156430:CDS | 40.0% | |
| !! | CGATGGAATGAGTGTTACTT+TGG | - | chr1_4:22708369-22708388 | Msa0156430:CDS | 40.0% |
| AAGAATTTCTCTGGCACACC+TGG | - | chr1_4:22703149-22703168 | Msa0156430:CDS | 45.0% | |
| TGGGATCAGAGCTTATCGAT+CGG | - | chr1_4:22703684-22703703 | Msa0156430:intron | 45.0% | |
| GCACTGCTCACCTTATAATC+CGG | - | chr1_4:22703756-22703775 | Msa0156430:intron | 45.0% | |
| ! | AGAAAATCGGACTGGAAACC+AGG | - | chr1_4:22704179-22704198 | Msa0156430:intron | 45.0% |
| GCATCAAAACCGGACAAAAC+CGG | - | chr1_4:22704218-22704237 | Msa0156430:intron | 45.0% | |
| CTGACCTTTAACCCTTGAAC+CGG | - | chr1_4:22704280-22704299 | Msa0156430:intron | 45.0% | |
| ! | GTCTACACAGGTTTAAGGTC+CGG | - | chr1_4:22704304-22704323 | Msa0156430:intron | 45.0% |
| !! | GCCTCTTTGTTGTTGGAGAT+TGG | - | chr1_4:22704740-22704759 | Msa0156430:intron | 45.0% |
| CCCAATCTCCAACAACAAAG+AGG | + | chr1_4:22704744-22704763 | None:intergenic | 45.0% | |
| CAAAACTGTAAGTCCAGCTG+AGG | + | chr1_4:22705215-22705234 | None:intergenic | 45.0% | |
| !! | TTGCTTTTGCCTTCATGAGC+TGG | - | chr1_4:22705296-22705315 | Msa0156430:intron | 45.0% |
| CAGACCAAAATTATCGGGTC+CGG | - | chr1_4:22705373-22705392 | Msa0156430:intron | 45.0% | |
| ! | AGATCCGGACCCGATAATTT+TGG | + | chr1_4:22705380-22705399 | None:intergenic | 45.0% |
| GTATATCAATCCAACGGCCA+AGG | + | chr1_4:22705433-22705452 | None:intergenic | 45.0% | |
| AGATAGCAGCCGATTGTCAA+TGG | - | chr1_4:22705640-22705659 | Msa0156430:intron | 45.0% | |
| GATAGCAGCCGATTGTCAAT+GGG | - | chr1_4:22705641-22705660 | Msa0156430:intron | 45.0% | |
| ACATCATTGCACTGTGGGAA+AGG | + | chr1_4:22705785-22705804 | None:intergenic | 45.0% | |
| AGATAGCATTCTACCGCATG+CGG | - | chr1_4:22705825-22705844 | Msa0156430:intron | 45.0% | |
| ! | TCTAAAAGTGCAACCGCATG+CGG | + | chr1_4:22705841-22705860 | None:intergenic | 45.0% |
| !! | CATCGGTTTCGTTTCATGCT+TGG | - | chr1_4:22705907-22705926 | Msa0156430:intron | 45.0% |
| GTCCTGGATCTAATGTACCT+TGG | - | chr1_4:22705970-22705989 | Msa0156430:intron | 45.0% | |
| AGTGGTATGGTTCTCGCTTA+GGG | + | chr1_4:22706418-22706437 | None:intergenic | 45.0% | |
| TAGTGGTATGGTTCTCGCTT+AGG | + | chr1_4:22706419-22706438 | None:intergenic | 45.0% | |
| !! | CAAATGGGCATTTGGTGTAG+TGG | + | chr1_4:22706436-22706455 | None:intergenic | 45.0% |
| !! | GCGGAAATTTCAGTTTTGGC+GGG | + | chr1_4:22706512-22706531 | None:intergenic | 45.0% |
| !! | AAAATAAATAAATAATACTT+AGG | + | chr1_4:22703312-22703331 | None:intergenic | 5.0% |
| CTTATCGGGCCTATATCCGA+TGG | + | chr1_4:22703605-22703624 | None:intergenic | 50.0% | |
| GGGATCAGAGCTTATCGATC+GGG | - | chr1_4:22703685-22703704 | Msa0156430:intron | 50.0% | |
| !! | ATGTGTGTCTGGTTCTCAGC+CGG | + | chr1_4:22704128-22704147 | None:intergenic | 50.0% |
| CTGAGAACCAGACACACATC+CGG | - | chr1_4:22704129-22704148 | Msa0156430:intron | 50.0% | |
| ATTTGGACCGGATGTGTGTC+TGG | + | chr1_4:22704139-22704158 | None:intergenic | 50.0% | |
| ACCTTGGCAGAAAATCGGAC+TGG | - | chr1_4:22704171-22704190 | Msa0156430:intron | 50.0% | |
| ! | TCCAGTCCGATTTTCTGCCA+AGG | + | chr1_4:22704175-22704194 | None:intergenic | 50.0% |
| TCAAAACCGGACAAAACCGG+CGG | - | chr1_4:22704221-22704240 | Msa0156430:intron | 50.0% | |
| CCTTAAACCTGTGTAGACGC+CGG | + | chr1_4:22704302-22704321 | None:intergenic | 50.0% | |
| ! | TTGCTGTTACCTGTGGAGTG+TGG | + | chr1_4:22705168-22705187 | None:intergenic | 50.0% |
| !!! | GGGACATTGCCATTTTGGAG+AGG | - | chr1_4:22705249-22705268 | Msa0156430:intron | 50.0% |
| GGCCGTTGGATTGATATACC+AGG | - | chr1_4:22705434-22705453 | Msa0156430:intron | 50.0% | |
| GGCCAAGGTACATTAGATCC+AGG | + | chr1_4:22705975-22705994 | None:intergenic | 50.0% | |
| GGATCTAATGTACCTTGGCC+TGG | - | chr1_4:22705975-22705994 | Msa0156430:intron | 50.0% | |
| TCAAAATAGTCGCCAGGCCA+AGG | + | chr1_4:22705990-22706009 | None:intergenic | 50.0% | |
| !! | GGGCATTTGGTGTAGTGGTA+TGG | + | chr1_4:22706431-22706450 | None:intergenic | 50.0% |
| GGCACACCTGGTACTGTTCT+TGG | - | chr1_4:22703161-22703180 | Msa0156430:CDS | 55.0% | |
| !! | GACGCCGGTTCAAGGGTTAA+AGG | + | chr1_4:22704287-22704306 | None:intergenic | 55.0% |
| !! | CTGTGTAGACGCCGGTTCAA+GGG | + | chr1_4:22704294-22704313 | None:intergenic | 55.0% |
| CCGGCGTCTACACAGGTTTA+AGG | - | chr1_4:22704299-22704318 | Msa0156430:intron | 55.0% | |
| CTGTGGAGTGTGGATACCAG+TGG | + | chr1_4:22705158-22705177 | None:intergenic | 55.0% | |
| CACTGGTATCCACACTCCAC+AGG | - | chr1_4:22705156-22705175 | Msa0156430:intron | 55.0% | |
| GCTGCTAGAGGGGATAGAAG+TGG | + | chr1_4:22705409-22705428 | None:intergenic | 55.0% | |
| TATCCCCTCTAGCAGCACCT+TGG | - | chr1_4:22705413-22705432 | Msa0156430:intron | 55.0% | |
| GGGTGTAGCATGACTGACCT+TGG | - | chr1_4:22707108-22707127 | Msa0156430:intron | 55.0% | |
| GGTTCTCAGCCGGATCAGTC+AGG | + | chr1_4:22704118-22704137 | None:intergenic | 60.0% | |
| !! | CCTGTGTAGACGCCGGTTCA+AGG | + | chr1_4:22704295-22704314 | None:intergenic | 60.0% |
| CCTTGAACCGGCGTCTACAC+AGG | - | chr1_4:22704292-22704311 | Msa0156430:intron | 60.0% | |
| !! | ACGGCCAAGGTGCTGCTAGA+GGG | + | chr1_4:22705420-22705439 | None:intergenic | 60.0% |
| !! | AACGGCCAAGGTGCTGCTAG+AGG | + | chr1_4:22705421-22705440 | None:intergenic | 60.0% |
| TCTAGCAGCACCTTGGCCGT+TGG | - | chr1_4:22705420-22705439 | Msa0156430:intron | 60.0% | |
| GGACAGGGGTTCTTGAGTCC+TGG | - | chr1_4:22705954-22705973 | Msa0156430:intron | 60.0% | |
| GTTCTCGCTTAGGGTGCGAG+AGG | + | chr1_4:22706409-22706428 | None:intergenic | 60.0% | |
| !!! | GGCAAGCCGCCGGTTTTGTC+CGG | + | chr1_4:22704230-22704249 | None:intergenic | 65.0% |
| GGACAAAACCGGCGGCTTGC+CGG | - | chr1_4:22704229-22704248 | Msa0156430:intron | 65.0% | |
| GAGACAAACCGGCAAGCCGC+CGG | + | chr1_4:22704240-22704259 | None:intergenic | 65.0% | |
| !! | GGCGGCTTGCCGGTTTGTCT+CGG | - | chr1_4:22704239-22704258 | Msa0156430:intron | 65.0% |
| GCTGCAGCTTCTGCCTCAGC+TGG | - | chr1_4:22705199-22705218 | Msa0156430:intron | 65.0% | |
| !! | CGGCCAAGGTGCTGCTAGAG+GGG | + | chr1_4:22705419-22705438 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 22703146 | 22708411 | 22703146 | ID=Msa0156430;Name=Msa0156430 |
| chr1_4 | mRNA | 22703146 | 22708411 | 22703146 | ID=Msa0156430-mRNA-1;Parent=Msa0156430;Name=Msa0156430-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|0.5|0|0.25|4|0|141 |
| chr1_4 | exon | 22708306 | 22708411 | 22708306 | ID=Msa0156430-mRNA-1:exon:8059;Parent=Msa0156430-mRNA-1 |
| chr1_4 | exon | 22706190 | 22706351 | 22706190 | ID=Msa0156430-mRNA-1:exon:8058;Parent=Msa0156430-mRNA-1 |
| chr1_4 | exon | 22703531 | 22703613 | 22703531 | ID=Msa0156430-mRNA-1:exon:8057;Parent=Msa0156430-mRNA-1 |
| chr1_4 | exon | 22703146 | 22703220 | 22703146 | ID=Msa0156430-mRNA-1:exon:8056;Parent=Msa0156430-mRNA-1 |
| chr1_4 | CDS | 22708306 | 22708411 | 22708306 | ID=Msa0156430-mRNA-1:cds;Parent=Msa0156430-mRNA-1 |
| chr1_4 | CDS | 22706190 | 22706351 | 22706190 | ID=Msa0156430-mRNA-1:cds;Parent=Msa0156430-mRNA-1 |
| chr1_4 | CDS | 22703531 | 22703613 | 22703531 | ID=Msa0156430-mRNA-1:cds;Parent=Msa0156430-mRNA-1 |
| chr1_4 | CDS | 22703146 | 22703220 | 22703146 | ID=Msa0156430-mRNA-1:cds;Parent=Msa0156430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
