Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157600 | RHN78770.1 | 74.576 | 295 | 51 | 4 | 27 | 303 | 16 | 304 | 1.66e-137 | 415 |
| Msa0157600 | RHN78770.1 | 82.807 | 285 | 34 | 4 | 380 | 660 | 43 | 316 | 2.05e-155 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157600 | A0A396JKH3 | 74.576 | 295 | 51 | 4 | 27 | 303 | 16 | 304 | 7.95e-138 | 415 |
| Msa0157600 | A0A396JKH3 | 82.807 | 285 | 34 | 4 | 380 | 660 | 43 | 316 | 9.81e-156 | 461 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0157600 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157600 | MtrunA17_Chr1g0169561 | 82.807 | 285 | 34 | 4 | 380 | 660 | 43 | 316 | 1.89e-159 | 461 |
| Msa0157600 | MtrunA17_Chr1g0169561 | 74.576 | 295 | 51 | 4 | 27 | 303 | 16 | 304 | 1.53e-141 | 415 |
| Msa0157600 | MtrunA17_Chr1g0169521 | 82.168 | 286 | 36 | 4 | 379 | 660 | 42 | 316 | 1.32e-156 | 454 |
| Msa0157600 | MtrunA17_Chr1g0169521 | 74.828 | 290 | 49 | 4 | 27 | 298 | 16 | 299 | 2.51e-140 | 412 |
| Msa0157600 | MtrunA17_Chr1g0174001 | 72.449 | 196 | 47 | 3 | 471 | 660 | 1 | 195 | 2.76e-88 | 273 |
| Msa0157600 | MtrunA17_Chr1g0174001 | 68.750 | 176 | 28 | 2 | 148 | 296 | 1 | 176 | 7.18e-71 | 228 |
| Msa0157600 | MtrunA17_Chr7g0214511 | 53.469 | 245 | 76 | 10 | 430 | 660 | 67 | 287 | 3.45e-55 | 189 |
| Msa0157600 | MtrunA17_Chr1g0174871 | 38.435 | 294 | 123 | 11 | 380 | 659 | 35 | 284 | 5.21e-35 | 134 |
| Msa0157600 | MtrunA17_Chr1g0174871 | 31.461 | 267 | 126 | 10 | 53 | 297 | 28 | 259 | 7.48e-23 | 99.4 |
| Msa0157600 | MtrunA17_Chr1g0172861 | 37.705 | 305 | 107 | 13 | 379 | 660 | 34 | 278 | 2.91e-33 | 129 |
| Msa0157600 | MtrunA17_Chr1g0172861 | 34.007 | 297 | 112 | 12 | 22 | 290 | 8 | 248 | 7.98e-20 | 90.1 |
| Msa0157600 | MtrunA17_Chr1g0174861 | 40.260 | 231 | 95 | 7 | 396 | 625 | 36 | 224 | 3.94e-33 | 127 |
| Msa0157600 | MtrunA17_Chr1g0174861 | 38.710 | 186 | 78 | 6 | 120 | 280 | 50 | 224 | 2.11e-21 | 94.0 |
| Msa0157600 | MtrunA17_Chr1g0169531 | 76.316 | 76 | 17 | 1 | 308 | 383 | 242 | 316 | 1.64e-27 | 114 |
| Msa0157600 | MtrunA17_Chr1g0193731 | 39.916 | 238 | 93 | 9 | 430 | 659 | 51 | 246 | 6.73e-26 | 108 |
| Msa0157600 | MtrunA17_Chr1g0172961 | 35.857 | 251 | 105 | 13 | 379 | 612 | 34 | 245 | 4.06e-22 | 96.7 |
| Msa0157600 | MtrunA17_Chr1g0172961 | 32.927 | 246 | 110 | 9 | 51 | 267 | 26 | 245 | 2.26e-21 | 94.4 |
| Msa0157600 | MtrunA17_Chr4g0037041 | 40.000 | 145 | 45 | 4 | 379 | 520 | 34 | 139 | 4.92e-18 | 82.8 |
| Msa0157600 | MtrunA17_Chr1g0180581 | 31.602 | 231 | 91 | 6 | 430 | 660 | 57 | 220 | 3.05e-17 | 81.3 |
| Msa0157600 | MtrunA17_Chr1g0180581 | 31.183 | 279 | 90 | 11 | 24 | 302 | 8 | 184 | 3.70e-13 | 69.3 |
| Msa0157600 | MtrunA17_Chr7g0228791 | 61.194 | 67 | 25 | 1 | 308 | 374 | 167 | 232 | 5.64e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 672 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTCCAAAGGGTTTGAATA+AGG | 0.204531 | 1_4:+25423409 | Msa0157600:CDS |
| TGCCACATCCCTCGTGTTAC+TGG | 0.252739 | 1_4:+25417287 | Msa0157600:CDS |
| ACCGAAGATGAAACCGAATT+AGG | 0.275613 | 1_4:+25423878 | Msa0157600:CDS |
| AGCGAAGATGAAACTGAATT+AGG | 0.276698 | 1_4:+25415031 | Msa0157600:CDS |
| AGGTTGAGGAAGAGTGTTAG+AGG | 0.283104 | 1_4:-25414366 | None:intergenic |
| TGAATCACCGTCACGGTAAA+AGG | 0.285017 | 1_4:+25423657 | Msa0157600:CDS |
| AACAGAAAAGAAACACTAAT+TGG | 0.288536 | 1_4:-25423963 | None:intergenic |
| CCCTAATTCGGTTTCATCTT+CGG | 0.303612 | 1_4:-25423879 | None:intergenic |
| GATCACTTGAATGATGAAAA+TGG | 0.324278 | 1_4:-25414025 | None:intergenic |
| AACTATAGGGTTTGAACTTA+GGG | 0.333626 | 1_4:-25414112 | None:intergenic |
| AAACTATAGGGTTTGAACTT+AGG | 0.336722 | 1_4:-25414113 | None:intergenic |
| ATTATCATCCACCGTATTGC+TGG | 0.360275 | 1_4:-25414843 | None:intergenic |
| ATGTCCATTCAAACCACTAT+TGG | 0.376246 | 1_4:-25414552 | None:intergenic |
| TACTTTGACAAGTCAGTTGC+TGG | 0.380308 | 1_4:-25423494 | None:intergenic |
| ATTATCATCCACAGTATTGC+TGG | 0.382365 | 1_4:-25423690 | None:intergenic |
| TGAATGATGAAAATGGAAAT+AGG | 0.384414 | 1_4:-25414018 | None:intergenic |
| ATCAGCAATACGCCTTCTCC+TGG | 0.390025 | 1_4:-25414732 | None:intergenic |
| CCGAAGATGAAACCGAATTA+GGG | 0.394408 | 1_4:+25423879 | Msa0157600:CDS |
| GTACCCTTATTCAAACCCTT+TGG | 0.395341 | 1_4:-25423413 | None:intergenic |
| TCGAAATTCCTGACAACTCT+TGG | 0.403974 | 1_4:-25423902 | None:intergenic |
| AGGTTTAAGAAGAGTGTTGA+AGG | 0.405440 | 1_4:-25423192 | None:intergenic |
| ACATCACATGTATGGTTCTT+CGG | 0.407728 | 1_4:-25423332 | None:intergenic |
| GCGAAGATGAAACTGAATTA+GGG | 0.408376 | 1_4:+25415032 | Msa0157600:CDS |
| GACAACTCTTGGCCCTAATT+CGG | 0.409738 | 1_4:-25423891 | None:intergenic |
| TCATCCAACAACGCTTTGAA+TGG | 0.417838 | 1_4:+25423371 | Msa0157600:CDS |
| GACTTTGTTCCAAGGAAGAT+GGG | 0.419216 | 1_4:-25414634 | None:intergenic |
| ACTCCAAAGGGTTTGAATAA+GGG | 0.422374 | 1_4:+25423410 | Msa0157600:CDS |
| TCATCCAATAGTGGTTTGAA+TGG | 0.425109 | 1_4:+25414548 | Msa0157600:CDS |
| CATAATCATGATCATGATGA+TGG | 0.425720 | 1_4:+25423305 | Msa0157600:CDS |
| TTGAAGTTGATGAAGGAAGA+AGG | 0.426924 | 1_4:+25417369 | Msa0157600:CDS |
| CACAAACATAATCATGATGA+TGG | 0.427443 | 1_4:+25414482 | Msa0157600:CDS |
| GTTAGAGACTGCAGGTTCCT+TGG | 0.427618 | 1_4:-25423828 | None:intergenic |
| TCCTTCATCAACTTCAAAAG+TGG | 0.428602 | 1_4:-25417363 | None:intergenic |
| AGTGTTAGAGGAGCGGTGAA+TGG | 0.433506 | 1_4:-25414354 | None:intergenic |
| ATCAGGAATATGCCTTCTCC+TGG | 0.435562 | 1_4:-25423555 | None:intergenic |
| TCTTCTTCCCTTCAATATCA+AGG | 0.438620 | 1_4:-25423850 | None:intergenic |
| TGACTTTGTTCCAAGGAAGA+TGG | 0.439982 | 1_4:-25414635 | None:intergenic |
| GGCTCTGTTCCAAGGAAGAT+GGG | 0.441032 | 1_4:-25423457 | None:intergenic |
| ACCGACTGCCCCATCTTCCT+TGG | 0.446430 | 1_4:+25414625 | Msa0157600:CDS |
| ACCGACTGCCCCATCTTCCT+TGG | 0.446430 | 1_4:+25423448 | Msa0157600:CDS |
| TGTTACAAACATCACATGTA+TGG | 0.446958 | 1_4:-25423340 | None:intergenic |
| ATTGTTATGTATGTCTTATG+AGG | 0.447174 | 1_4:+25423613 | Msa0157600:CDS |
| TGTTACAAACATCAGATGTA+TGG | 0.450947 | 1_4:-25414517 | None:intergenic |
| GGATGATCATAGAGGAAGGA+GGG | 0.454195 | 1_4:+25417334 | Msa0157600:CDS |
| GAGTATAATGGCAGAGTTGA+TGG | 0.454386 | 1_4:-25417442 | None:intergenic |
| GTCTCTAACCTTGATATTGA+AGG | 0.455784 | 1_4:+25423842 | Msa0157600:CDS |
| AGTGTTGAAGGAGCGGTGAA+TGG | 0.459272 | 1_4:-25423180 | None:intergenic |
| TGAAGTTGATGAAGGAAGAA+GGG | 0.460634 | 1_4:+25417370 | Msa0157600:CDS |
| ATGTCCATTCAAAGCGTTGT+TGG | 0.483248 | 1_4:-25423375 | None:intergenic |
| TGGCTCTGTTCCAAGGAAGA+TGG | 0.484956 | 1_4:-25423458 | None:intergenic |
| TATGAGATGGCATACTCAAA+AGG | 0.486406 | 1_4:+25414574 | Msa0157600:CDS |
| ATTTCCTCATCATCATCATC+AGG | 0.494146 | 1_4:-25423572 | None:intergenic |
| TGTCACAAAACATTCACCTC+TGG | 0.499496 | 1_4:+25414308 | Msa0157600:CDS |
| TGTCACAAAACATTTACCTC+TGG | 0.499496 | 1_4:+25423134 | Msa0157600:CDS |
| ATGAGATTTCATACTCCAAA+GGG | 0.500060 | 1_4:+25423398 | Msa0157600:CDS |
| TAACACGAGGGATGTGGCAG+CGG | 0.504551 | 1_4:-25417283 | None:intergenic |
| TACTCAAAAGGGTTCGAAGA+AGG | 0.504806 | 1_4:+25414586 | Msa0157600:CDS |
| AATTAGGGCCAAGAGTTGTC+AGG | 0.505315 | 1_4:+25423894 | Msa0157600:CDS |
| TCAAACATCACAAGATTCCA+AGG | 0.505616 | 1_4:+25423811 | Msa0157600:CDS |
| ATCATAGAGGAAGGAGGGGT+GGG | 0.507950 | 1_4:+25417339 | Msa0157600:CDS |
| CATGATCATGCTGTGAATAA+CGG | 0.509612 | 1_4:+25423233 | Msa0157600:CDS |
| CGTTATTCACAGCATGATCA+TGG | 0.509884 | 1_4:-25414406 | None:intergenic |
| CTCCAACATAAGCCGCGGAC+GGG | 0.512903 | 1_4:+25417240 | Msa0157600:intron |
| CGTTATTCACAGCATGATCA+TGG | 0.514523 | 1_4:-25423232 | None:intergenic |
| CATGATCATGCTGTGAATAA+CGG | 0.518528 | 1_4:+25414407 | Msa0157600:CDS |
| AACAAGGTGTGCTGCTAACA+AGG | 0.519240 | 1_4:+25414879 | Msa0157600:CDS |
| ACCTCTGGTAAATCACTTGG+TGG | 0.521390 | 1_4:+25423149 | Msa0157600:CDS |
| TTGCCACAACGAAAAGAACT+TGG | 0.525913 | 1_4:+25423754 | Msa0157600:CDS |
| ATGAGATGGCATACTCAAAA+GGG | 0.526510 | 1_4:+25414575 | Msa0157600:CDS |
| TGGCCCTTGCAGCATTGTCT+CGG | 0.527962 | 1_4:-25417404 | None:intergenic |
| CGGCAAATGAAGGAGACAAT+GGG | 0.529664 | 1_4:-25417263 | None:intergenic |
| GGATCTAGCTGTGATATTGA+AGG | 0.530396 | 1_4:+25414995 | Msa0157600:CDS |
| ATATCAAGGTTAGAGACTGC+AGG | 0.538103 | 1_4:-25423836 | None:intergenic |
| GCGGCAAATGAAGGAGACAA+TGG | 0.538261 | 1_4:-25417264 | None:intergenic |
| TTGGTCTTATATGATATTGG+CGG | 0.539661 | 1_4:-25414698 | None:intergenic |
| CTCAAGATGGCTCTGTTCCA+AGG | 0.539755 | 1_4:-25423465 | None:intergenic |
| GATGTGGCAGCGGCAAATGA+AGG | 0.540038 | 1_4:-25417273 | None:intergenic |
| CTCAAGTTGACTTTGTTCCA+AGG | 0.540256 | 1_4:-25414642 | None:intergenic |
| TCAAACATCGCAAGATTGCA+AGG | 0.542865 | 1_4:+25414964 | Msa0157600:CDS |
| ACGGTGATTCACATCAAGAT+TGG | 0.543281 | 1_4:-25423645 | None:intergenic |
| GATGATCATAGAGGAAGGAG+GGG | 0.543435 | 1_4:+25417335 | Msa0157600:CDS |
| GCAGAAGATTTCCAGCAATA+CGG | 0.546299 | 1_4:+25414832 | Msa0157600:CDS |
| TAAGAAGAGTGTTGAAGGAG+CGG | 0.548187 | 1_4:-25423187 | None:intergenic |
| GATCATAGAGGAAGGAGGGG+TGG | 0.549773 | 1_4:+25417338 | Msa0157600:CDS |
| AGTATAATGGCAGAGTTGAT+GGG | 0.549802 | 1_4:-25417441 | None:intergenic |
| TTGGTCTTATACGATATTGG+CGG | 0.553676 | 1_4:-25423521 | None:intergenic |
| ACTCAAAAGGGTTCGAAGAA+GGG | 0.553906 | 1_4:+25414587 | Msa0157600:CDS |
| ACCTCTGGTAAATCACTTGG+TGG | 0.556710 | 1_4:+25414323 | Msa0157600:CDS |
| TTTACCTCTGGTAAATCACT+TGG | 0.558168 | 1_4:+25423146 | Msa0157600:CDS |
| AACAAGGTGTGATGCGAACA+AGG | 0.559174 | 1_4:+25423726 | Msa0157600:CDS |
| TTCTTCTGTGCGCATAGTTG+CGG | 0.560409 | 1_4:-25417475 | None:intergenic |
| GAGGAAGAGTGTTAGAGGAG+CGG | 0.560783 | 1_4:-25414361 | None:intergenic |
| TCATCTTCAAAATCATCACT+TGG | 0.561665 | 1_4:-25423938 | None:intergenic |
| TTGTTATGTATGTCTTATGA+GGG | 0.562268 | 1_4:+25423614 | Msa0157600:CDS |
| CAAGATTGCAAGGAACCTGC+AGG | 0.562783 | 1_4:+25414974 | Msa0157600:CDS |
| TGCCAGTAACACGAGGGATG+TGG | 0.565267 | 1_4:-25417289 | None:intergenic |
| AGACCGAGACAATGCTGCAA+GGG | 0.565542 | 1_4:+25417401 | Msa0157600:CDS |
| GGCGTTTGTGATGAGTATAA+TGG | 0.566058 | 1_4:-25417454 | None:intergenic |
| ACAAACATAATCATGATGAT+GGG | 0.568114 | 1_4:+25414483 | Msa0157600:CDS |
| TTCACCTCTGGTAAATCACT+TGG | 0.575760 | 1_4:+25414320 | Msa0157600:CDS |
| GGATGATAATGAGAAGATGA+AGG | 0.579672 | 1_4:+25414856 | Msa0157600:CDS |
| ATATCACAGCTAGATCCTGC+AGG | 0.585006 | 1_4:-25414989 | None:intergenic |
| GGAGACAATGGGCCCGTCCG+CGG | 0.585316 | 1_4:-25417252 | None:intergenic |
| AAGATGGGGCAGTCGGTGAG+TGG | 0.586640 | 1_4:-25414619 | None:intergenic |
| TCTCTAACCTTGATATTGAA+GGG | 0.589756 | 1_4:+25423843 | Msa0157600:CDS |
| ATAATCATGATCATGATGAT+GGG | 0.591510 | 1_4:+25423306 | Msa0157600:CDS |
| TACTTTGACAAGTCAGTGGA+TGG | 0.591586 | 1_4:-25414671 | None:intergenic |
| TCAGCAATACGCCTTCTCCT+GGG | 0.592381 | 1_4:-25414731 | None:intergenic |
| GCACATGAAAGCAACTGTTA+CGG | 0.593763 | 1_4:+25417309 | Msa0157600:CDS |
| ACTCCAACATAAGCCGCGGA+CGG | 0.595128 | 1_4:+25417239 | Msa0157600:intron |
| GATGGGTTTGAGTATACGAA+TGG | 0.601049 | 1_4:-25417424 | None:intergenic |
| TATGAGATTTCATACTCCAA+AGG | 0.603569 | 1_4:+25423397 | Msa0157600:CDS |
| AATGAGAAGATGAAGGAACA+AGG | 0.607433 | 1_4:+25414863 | Msa0157600:CDS |
| AATGAGAAGATGAAGGAACA+AGG | 0.607433 | 1_4:+25423710 | Msa0157600:CDS |
| TCCAAGGAAGATGGGGCAGT+CGG | 0.610571 | 1_4:-25414626 | None:intergenic |
| TCCAAGGAAGATGGGGCAGT+CGG | 0.610571 | 1_4:-25423449 | None:intergenic |
| TCAGGAATATGCCTTCTCCT+GGG | 0.611726 | 1_4:-25423554 | None:intergenic |
| TACATGTGATGTTTGTAACA+AGG | 0.614171 | 1_4:+25423343 | Msa0157600:CDS |
| CTTCATGATCGATGTAGCAG+TGG | 0.623294 | 1_4:-25413979 | None:intergenic |
| GGATGATAATGAGAAGATGA+AGG | 0.625400 | 1_4:+25423703 | Msa0157600:CDS |
| TTTCATGTGCCAGTAACACG+AGG | 0.625696 | 1_4:-25417296 | None:intergenic |
| AAGACCGAGACAATGCTGCA+AGG | 0.626612 | 1_4:+25417400 | Msa0157600:CDS |
| GGAAGGATGATCATAGAGGA+AGG | 0.633642 | 1_4:+25417330 | Msa0157600:CDS |
| ACGAAAAGAACTTGGTGCTG+AGG | 0.634219 | 1_4:+25423762 | Msa0157600:CDS |
| ATGAAAGCAACTGTTACGGA+AGG | 0.643792 | 1_4:+25417313 | Msa0157600:CDS |
| CAAGTACTTTGACAAGTCAG+TGG | 0.643992 | 1_4:-25414675 | None:intergenic |
| ACTTTGTTCCAAGGAAGATG+GGG | 0.644016 | 1_4:-25414633 | None:intergenic |
| GCGTATTGCTGATAATGATG+AGG | 0.644357 | 1_4:+25414742 | Msa0157600:CDS |
| GAAGATTTCCAGCAATACTG+TGG | 0.653448 | 1_4:+25423682 | Msa0157600:CDS |
| TATTCCTGATGATGATGATG+AGG | 0.654766 | 1_4:+25423568 | Msa0157600:CDS |
| GAAGATTTCCAGCAATACGG+TGG | 0.664760 | 1_4:+25414835 | Msa0157600:CDS |
| TTGCTGGTAGAAACTCAAGA+TGG | 0.666842 | 1_4:-25423478 | None:intergenic |
| GCTCTGTTCCAAGGAAGATG+GGG | 0.667093 | 1_4:-25423456 | None:intergenic |
| AGGATGATCATAGAGGAAGG+AGG | 0.668128 | 1_4:+25417333 | Msa0157600:CDS |
| TTACGGAAGGATGATCATAG+AGG | 0.680289 | 1_4:+25417326 | Msa0157600:CDS |
| CTTGATGTGAATCACCGTCA+CGG | 0.686103 | 1_4:+25423650 | Msa0157600:CDS |
| GTTTGAATGGACATATGAGA+TGG | 0.694516 | 1_4:+25414561 | Msa0157600:CDS |
| GCCACCAAGTGATTTACCAG+AGG | 0.704970 | 1_4:-25423150 | None:intergenic |
| AATGAAATTCAGAAACAACA+AGG | 0.709396 | 1_4:+25414083 | Msa0157600:CDS |
| TTCATGTGCCAGTAACACGA+GGG | 0.716078 | 1_4:-25417295 | None:intergenic |
| ACCACCAAGTGATTTACCAG+AGG | 0.717389 | 1_4:-25414324 | None:intergenic |
| GATCATGCTGTGAATAACGG+CGG | 0.741138 | 1_4:+25414410 | Msa0157600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAAAAAATATTAATTTTA+TGG | - | chr1_4:25418468-25418487 | None:intergenic | 0.0% |
| !! | TATATTAAAATGAAATACAA+AGG | - | chr1_4:25418147-25418166 | None:intergenic | 10.0% |
| !!! | GTTTTTATCTTTTTTTTTTT+TGG | + | chr1_4:25418419-25418438 | Msa0157600:intron | 10.0% |
| !! | CATTATTAAAAGTTTATAAA+AGG | + | chr1_4:25421604-25421623 | Msa0157600:intron | 10.0% |
| !!! | AAAATTTTGAATTTTTTTTG+GGG | + | chr1_4:25422073-25422092 | Msa0157600:intron | 10.0% |
| !! | TTTAGTTATCTAAGAATAAT+TGG | + | chr1_4:25415489-25415508 | Msa0157600:intron | 15.0% |
| !!! | ATTTTATCTTATGACTATTA+TGG | + | chr1_4:25415542-25415561 | Msa0157600:intron | 15.0% |
| !! | ATACAATACAACATATTATT+TGG | - | chr1_4:25415677-25415696 | None:intergenic | 15.0% |
| !!! | TCTTATTTTGAGATATTATT+TGG | - | chr1_4:25415711-25415730 | None:intergenic | 15.0% |
| !! | TGAATATGTTAAATTATACA+TGG | - | chr1_4:25417895-25417914 | None:intergenic | 15.0% |
| !!! | TTAATTGTTTTTTGATTTCT+TGG | - | chr1_4:25418712-25418731 | None:intergenic | 15.0% |
| !! | TTTATTTGAACAATTCAATT+AGG | + | chr1_4:25419327-25419346 | Msa0157600:intron | 15.0% |
| !!! | AAAAATTGATCATTTTTAAG+AGG | - | chr1_4:25421499-25421518 | None:intergenic | 15.0% |
| !!! | ATTCAAAATTTTTTTCTAGA+GGG | - | chr1_4:25422065-25422084 | None:intergenic | 15.0% |
| !!! | AATTCAAAATTTTTTTCTAG+AGG | - | chr1_4:25422066-25422085 | None:intergenic | 15.0% |
| !! | ACAAAAAATAAAAGAAATGA+AGG | + | chr1_4:25422303-25422322 | Msa0157600:intron | 15.0% |
| !! | CAAAAAATAAAAGAAATGAA+GGG | + | chr1_4:25422304-25422323 | Msa0157600:intron | 15.0% |
| !!! | ATGATATTCATAGTTGTTTT+CGG | - | chr1_4:25414057-25414076 | None:intergenic | 20.0% |
| !!! | TTTTTGGTCTTATATGATAT+TGG | - | chr1_4:25414704-25414723 | None:intergenic | 20.0% |
| !! | TATCATATAAGACCAAAAAA+CGG | + | chr1_4:25414705-25414724 | Msa0157600:CDS | 20.0% |
| !! | ACATTGTTATATATGTCTTA+TGG | + | chr1_4:25414785-25414804 | Msa0157600:intron | 20.0% |
| !! | CATTGTTATATATGTCTTAT+GGG | + | chr1_4:25414786-25414805 | Msa0157600:intron | 20.0% |
| !! | ATTGTTATATATGTCTTATG+GGG | + | chr1_4:25414787-25414806 | Msa0157600:intron | 20.0% |
| !! | AAGCTAGTATGAAAATATAA+TGG | + | chr1_4:25415350-25415369 | Msa0157600:intron | 20.0% |
| !!! | ATGAAAATATAATGGAATTG+AGG | + | chr1_4:25415358-25415377 | Msa0157600:intron | 20.0% |
| !!! | TGAAAATATAATGGAATTGA+GGG | + | chr1_4:25415359-25415378 | Msa0157600:intron | 20.0% |
| !! | CTTAGATAACTAAATAAGAT+AGG | - | chr1_4:25415483-25415502 | None:intergenic | 20.0% |
| !!! | TTTAATTGATTTGAATGTAG+AGG | + | chr1_4:25415519-25415538 | Msa0157600:intron | 20.0% |
| !!! | TGTCTTATAATTTTGATTGA+CGG | + | chr1_4:25416055-25416074 | Msa0157600:intron | 20.0% |
| !! | TTAGCAATCAATTATTTAGA+CGG | - | chr1_4:25416254-25416273 | None:intergenic | 20.0% |
| !! | CAATTATGAATGTTACTATT+AGG | + | chr1_4:25416626-25416645 | Msa0157600:intron | 20.0% |
| !!! | AAATTTTCAACAATGTGTTT+AGG | - | chr1_4:25416730-25416749 | None:intergenic | 20.0% |
| !! | TTGAAAATTTACATGTTGTT+AGG | + | chr1_4:25416740-25416759 | Msa0157600:intron | 20.0% |
| !! | TAATACAACTGCAAAATATA+TGG | - | chr1_4:25416958-25416977 | None:intergenic | 20.0% |
| !! | GAGGATGATTAAATTTAAAA+AGG | - | chr1_4:25417701-25417720 | None:intergenic | 20.0% |
| !!! | ATCTGTTAGTTTGTTAATAT+AGG | + | chr1_4:25418084-25418103 | Msa0157600:intron | 20.0% |
| !! | ATATAGGTCAGTTAATTATT+CGG | + | chr1_4:25418100-25418119 | Msa0157600:intron | 20.0% |
| !!! | AACTTTGAAATGAGAAAAAT+AGG | + | chr1_4:25418325-25418344 | Msa0157600:intron | 20.0% |
| !!! | CTTGTTATTTTGAAAAAGAA+TGG | + | chr1_4:25418364-25418383 | Msa0157600:intron | 20.0% |
| !!! | TTTTTTGATTTCTTGGATTT+TGG | - | chr1_4:25418705-25418724 | None:intergenic | 20.0% |
| !! | TTAAAATAATAAGACCAAAG+TGG | + | chr1_4:25418728-25418747 | Msa0157600:intron | 20.0% |
| !! | AAACAATAGCGTTATTAATT+AGG | + | chr1_4:25418963-25418982 | Msa0157600:intron | 20.0% |
| !! | TTGAATTGTTCAAATAAACA+TGG | - | chr1_4:25419325-25419344 | None:intergenic | 20.0% |
| !! | AATAGAGTCTTTATTCAATT+AGG | + | chr1_4:25419469-25419488 | Msa0157600:intron | 20.0% |
| !! | ATAGAGTCTTTATTCAATTA+GGG | + | chr1_4:25419470-25419489 | Msa0157600:intron | 20.0% |
| !! | GAATTAAAACATACATAAAC+TGG | + | chr1_4:25419574-25419593 | Msa0157600:intron | 20.0% |
| !!! | TGAATTGTTTTCATAAACAA+GGG | - | chr1_4:25419676-25419695 | None:intergenic | 20.0% |
| !! | ATTATAAACAAAGAAGAAGA+TGG | + | chr1_4:25420014-25420033 | Msa0157600:intron | 20.0% |
| !! | AAGAAATTATTGGAAAACAT+TGG | - | chr1_4:25420158-25420177 | None:intergenic | 20.0% |
| !!! | GTTTTCCAATAATTTCTTTA+AGG | + | chr1_4:25420160-25420179 | Msa0157600:intron | 20.0% |
| !! | TAAGTCCTTAAAGAAATTAT+TGG | - | chr1_4:25420168-25420187 | None:intergenic | 20.0% |
| !!! | TACGCAAAGTTTTTTTATTA+AGG | - | chr1_4:25420478-25420497 | None:intergenic | 20.0% |
| !! | AAATTGCAATAATTGATGAA+AGG | + | chr1_4:25420638-25420657 | Msa0157600:intron | 20.0% |
| !!! | TACATAATTAATTTTTGCCT+TGG | - | chr1_4:25420669-25420688 | None:intergenic | 20.0% |
| !!! | AACCTTTTTCTTTTCATTTT+TGG | + | chr1_4:25420936-25420955 | Msa0157600:intron | 20.0% |
| !! | GAATAAAACCAAGATTAATT+TGG | - | chr1_4:25420963-25420982 | None:intergenic | 20.0% |
| !!! | AGAATGAAAAATTTTATCGA+GGG | - | chr1_4:25421061-25421080 | None:intergenic | 20.0% |
| !!! | TATATTAGAGTTAATTTTGC+TGG | - | chr1_4:25421249-25421268 | None:intergenic | 20.0% |
| !!! | TTTTTAAGAGGAAAGTTTAT+GGG | - | chr1_4:25421487-25421506 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGAGGAAAGTTTA+TGG | - | chr1_4:25421488-25421507 | None:intergenic | 20.0% |
| !!! | TTTAGATTGTTATTGACTTA+TGG | - | chr1_4:25421569-25421588 | None:intergenic | 20.0% |
| !!! | TATATGTACTTTTTCTCTTT+TGG | - | chr1_4:25422231-25422250 | None:intergenic | 20.0% |
| !! | TATGAAAAATAGAGATTCTA+AGG | + | chr1_4:25422266-25422285 | Msa0157600:intron | 20.0% |
| !! | TAAAAAGTAAAAAGAGAGTA+AGG | + | chr1_4:25422698-25422717 | Msa0157600:intron | 20.0% |
| !! | AAAAAGTAAAAAGAGAGTAA+GGG | + | chr1_4:25422699-25422718 | Msa0157600:intron | 20.0% |
| !!! | TGATATTCATAGTTGTTTTT+GGG | - | chr1_4:25422981-25423000 | None:intergenic | 20.0% |
| !!! | ATGATATTCATAGTTGTTTT+TGG | - | chr1_4:25414057-25414076 | None:intergenic | 20.0% |
| ! | TGAATGATGAAAATGGAAAT+AGG | - | chr1_4:25414021-25414040 | None:intergenic | 25.0% |
| !!! | TGATATTCATAGTTGTTTTC+GGG | - | chr1_4:25414056-25414075 | None:intergenic | 25.0% |
| ! | AATGAAATTCAGAAACAACA+AGG | + | chr1_4:25414083-25414102 | Msa0157600:CDS | 25.0% |
| ! | GAGTGTACAAAAAAACTATA+GGG | - | chr1_4:25414128-25414147 | None:intergenic | 25.0% |
| ! | AGAGTGTACAAAAAAACTAT+AGG | - | chr1_4:25414129-25414148 | None:intergenic | 25.0% |
| !! | AATTTTTGTAGTCTTCTTCA+AGG | - | chr1_4:25414438-25414457 | None:intergenic | 25.0% |
| ! | AGAAGACTACAAAAATTACT+TGG | + | chr1_4:25414441-25414460 | Msa0157600:CDS | 25.0% |
| ! | GAAGACTACAAAAATTACTT+GGG | + | chr1_4:25414442-25414461 | Msa0157600:CDS | 25.0% |
| ! | ACAAACATAATCATGATGAT+GGG | + | chr1_4:25414483-25414502 | Msa0157600:CDS | 25.0% |
| ! | TTGTTATATATGTCTTATGG+GGG | + | chr1_4:25414788-25414807 | Msa0157600:intron | 25.0% |
| ! | GTTTGAAAAATCTTGTCTTT+AGG | - | chr1_4:25414950-25414969 | None:intergenic | 25.0% |
| !! | AAATTAGATTACAGCATTGA+GGG | - | chr1_4:25415188-25415207 | None:intergenic | 25.0% |
| ! | AAAATTAGATTACAGCATTG+AGG | - | chr1_4:25415189-25415208 | None:intergenic | 25.0% |
| ! | AAGATTAAGACAAACACAAA+AGG | - | chr1_4:25415290-25415309 | None:intergenic | 25.0% |
| ! | ATCTTATGACTATTATGGTT+TGG | + | chr1_4:25415547-25415566 | Msa0157600:intron | 25.0% |
| ! | AAAATAAGAGTCAACAAAGT+TGG | + | chr1_4:25415722-25415741 | Msa0157600:intron | 25.0% |
| ! | TTACAGCATCTATCTAAATT+TGG | - | chr1_4:25415904-25415923 | None:intergenic | 25.0% |
| ! | TCATAATTGTATTAACCAGT+TGG | + | chr1_4:25415956-25415975 | Msa0157600:intron | 25.0% |
| !!! | AAAAGATCATTGATTTTCCT+CGG | - | chr1_4:25416136-25416155 | None:intergenic | 25.0% |
| !! | TCTTGAATCTTTAACACTTT+TGG | + | chr1_4:25416310-25416329 | Msa0157600:intron | 25.0% |
| ! | GATCTCAAATGAAATAATCA+GGG | - | chr1_4:25416357-25416376 | None:intergenic | 25.0% |
| ! | AGATCTCAAATGAAATAATC+AGG | - | chr1_4:25416358-25416377 | None:intergenic | 25.0% |
| !! | ACATAATTTGCAATGTATGA+AGG | + | chr1_4:25416391-25416410 | Msa0157600:intron | 25.0% |
| ! | TAGTAACATTCATAATTGAG+AGG | - | chr1_4:25416624-25416643 | None:intergenic | 25.0% |
| ! | AATTAGACTCAATAGCTAAT+TGG | - | chr1_4:25416828-25416847 | None:intergenic | 25.0% |
| ! | TCAAAATACTCCTTTCTTAT+AGG | + | chr1_4:25417575-25417594 | Msa0157600:intron | 25.0% |
| !! | TTTTAACAGATAGAAAGGAA+CGG | - | chr1_4:25417791-25417810 | None:intergenic | 25.0% |
| !!! | CAACATTTTAACAGATAGAA+AGG | - | chr1_4:25417796-25417815 | None:intergenic | 25.0% |
| ! | ATCTGTTAAAATGTTGTATG+AGG | + | chr1_4:25417800-25417819 | Msa0157600:intron | 25.0% |
| ! | ACTAATAGAAACAGACTAAA+TGG | - | chr1_4:25418053-25418072 | None:intergenic | 25.0% |
| ! | TGCAGCATTCAAAATTAATA+TGG | - | chr1_4:25418216-25418235 | None:intergenic | 25.0% |
| ! | TGAATGCAAGAGAATAATAA+TGG | - | chr1_4:25418637-25418656 | None:intergenic | 25.0% |
| ! | TGTAAGAGAACAATATTGTT+TGG | + | chr1_4:25418662-25418681 | Msa0157600:intron | 25.0% |
| ! | ATCTTTATGAACATAGAAGA+CGG | + | chr1_4:25418814-25418833 | Msa0157600:intron | 25.0% |
| !! | TTTACTACTTCGATAGTTTT+TGG | - | chr1_4:25418904-25418923 | None:intergenic | 25.0% |
| !!! | AAAAGTTATTTTATTGCCCT+AGG | + | chr1_4:25418992-25419011 | Msa0157600:intron | 25.0% |
| ! | AACTAAATCTCTTAGAGATT+AGG | - | chr1_4:25419516-25419535 | None:intergenic | 25.0% |
| ! | GTTTACAAATAGCATAATCA+AGG | + | chr1_4:25419548-25419567 | Msa0157600:intron | 25.0% |
| ! | ATACATAAACTGGTAAAGAA+TGG | + | chr1_4:25419584-25419603 | Msa0157600:intron | 25.0% |
| !! | CTGAATTGTTTTCATAAACA+AGG | - | chr1_4:25419677-25419696 | None:intergenic | 25.0% |
| ! | GAAAACAATTCAGCTTAAAT+AGG | + | chr1_4:25419684-25419703 | Msa0157600:intron | 25.0% |
| ! | TTTGTTACTCAAGACAAAAT+CGG | - | chr1_4:25419756-25419775 | None:intergenic | 25.0% |
| ! | AGTAACAAACTTTCCAAATT+AGG | + | chr1_4:25419767-25419786 | Msa0157600:intron | 25.0% |
| ! | GTAACAAACTTTCCAAATTA+GGG | + | chr1_4:25419768-25419787 | Msa0157600:intron | 25.0% |
| ! | TAAGGAGAAATAAAGAAACA+AGG | - | chr1_4:25420460-25420479 | None:intergenic | 25.0% |
| ! | ATAAAAAAACTTTGCGTAAG+AGG | + | chr1_4:25420480-25420499 | Msa0157600:intron | 25.0% |
| !! | GAATTATTTAGGATGAAATC+AGG | - | chr1_4:25420745-25420764 | None:intergenic | 25.0% |
| ! | CTCATGAGTATGAATTATTT+AGG | - | chr1_4:25420756-25420775 | None:intergenic | 25.0% |
| ! | GACCAAAAATGAAAAGAAAA+AGG | - | chr1_4:25420941-25420960 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCCAAATTAATCT+TGG | + | chr1_4:25420952-25420971 | Msa0157600:intron | 25.0% |
| ! | TCATTTAGTCAATAATGTTG+TGG | - | chr1_4:25420987-25421006 | None:intergenic | 25.0% |
| !! | AACATTATTGACTAAATGAG+TGG | + | chr1_4:25420988-25421007 | Msa0157600:intron | 25.0% |
| !! | ACATTATTGACTAAATGAGT+GGG | + | chr1_4:25420989-25421008 | Msa0157600:intron | 25.0% |
| !! | GAGAATGAAAAATTTTATCG+AGG | - | chr1_4:25421062-25421081 | None:intergenic | 25.0% |
| !! | AGACTTTTCTTTATACTTGT+TGG | - | chr1_4:25421640-25421659 | None:intergenic | 25.0% |
| ! | TTCAATAAACACTAACAAAG+TGG | + | chr1_4:25421786-25421805 | Msa0157600:intron | 25.0% |
| ! | GTTGAAATATCCATCTTATA+TGG | + | chr1_4:25421825-25421844 | Msa0157600:intron | 25.0% |
| ! | GCTTAATTGAATAGGATTAT+AGG | - | chr1_4:25421860-25421879 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTTTCCTAAC+TGG | - | chr1_4:25422020-25422039 | None:intergenic | 25.0% |
| ! | GGAAAAAACAAATCAAGTTA+AGG | + | chr1_4:25422024-25422043 | Msa0157600:intron | 25.0% |
| !!! | ATTTTGAATTTTTTTTGGGG+TGG | + | chr1_4:25422076-25422095 | Msa0157600:intron | 25.0% |
| !!! | TTTTGAATTTTTTTTGGGGT+GGG | + | chr1_4:25422077-25422096 | Msa0157600:intron | 25.0% |
| ! | ACAAGAAGTTTATACTAGTT+CGG | + | chr1_4:25422341-25422360 | Msa0157600:intron | 25.0% |
| ! | AAACATTGGATATATAAGAG+AGG | + | chr1_4:25422445-25422464 | Msa0157600:intron | 25.0% |
| ! | AACATTGGATATATAAGAGA+GGG | + | chr1_4:25422446-25422465 | Msa0157600:intron | 25.0% |
| !!! | GTTTTATAAAGCATTAGCTA+GGG | - | chr1_4:25422796-25422815 | None:intergenic | 25.0% |
| ! | GAATGATGAAAATGGAAATA+GGG | - | chr1_4:25414020-25414039 | None:intergenic | 25.0% |
| ! | TGAATGATGAAAATGGAAAT+AGG | - | chr1_4:25414021-25414040 | None:intergenic | 25.0% |
| ! | AATGAAATTGAGAAACAACA+AGG | + | chr1_4:25423014-25423033 | Msa0157600:intron | 25.0% |
| !! | AATTTTTGTAGTCTTCTTCA+AGG | - | chr1_4:25414438-25414457 | None:intergenic | 25.0% |
| ! | AGAAGACTACAAAAATTACT+TGG | + | chr1_4:25414441-25414460 | Msa0157600:CDS | 25.0% |
| ! | GAAGACTACAAAAATTACTT+GGG | + | chr1_4:25414442-25414461 | Msa0157600:CDS | 25.0% |
| ! | ATAATCATGATCATGATGAT+GGG | + | chr1_4:25423306-25423325 | Msa0157600:CDS | 25.0% |
| !!! | TTTTTGGTCTTATACGATAT+TGG | - | chr1_4:25423527-25423546 | None:intergenic | 25.0% |
| ! | TATCGTATAAGACCAAAAAA+CGG | + | chr1_4:25423528-25423547 | Msa0157600:CDS | 25.0% |
| ! | ATTGTTATGTATGTCTTATG+AGG | + | chr1_4:25423613-25423632 | Msa0157600:CDS | 25.0% |
| ! | TTGTTATGTATGTCTTATGA+GGG | + | chr1_4:25423614-25423633 | Msa0157600:CDS | 25.0% |
| ! | GTTTGAAAAATTGCATCTTT+CGG | - | chr1_4:25423797-25423816 | None:intergenic | 25.0% |
| GATCACTTGAATGATGAAAA+TGG | - | chr1_4:25414028-25414047 | None:intergenic | 30.0% | |
| AACTATAGGGTTTGAACTTA+GGG | - | chr1_4:25414115-25414134 | None:intergenic | 30.0% | |
| AAACTATAGGGTTTGAACTT+AGG | - | chr1_4:25414116-25414135 | None:intergenic | 30.0% | |
| !!! | TTTTGGGTTTATCAAACGAA+TGG | - | chr1_4:25414208-25414227 | None:intergenic | 30.0% |
| !!! | TAATGATCATGGCTGTTTTT+GGG | - | chr1_4:25414224-25414243 | None:intergenic | 30.0% |
| !! | ATAATGATCATGGCTGTTTT+TGG | - | chr1_4:25414225-25414244 | None:intergenic | 30.0% |
| !!! | TGTTTGTTTGTTTTAGGTTG+AGG | - | chr1_4:25414383-25414402 | None:intergenic | 30.0% |
| !! | TGGATCTGTTTGTTTGTTTT+AGG | - | chr1_4:25414389-25414408 | None:intergenic | 30.0% |
| CACAAACATAATCATGATGA+TGG | + | chr1_4:25414482-25414501 | Msa0157600:CDS | 30.0% | |
| TGTTACAAACATCAGATGTA+TGG | - | chr1_4:25414520-25414539 | None:intergenic | 30.0% | |
| TACATCTGATGTTTGTAACA+AGG | + | chr1_4:25414520-25414539 | Msa0157600:intron | 30.0% | |
| !!! | AAGGTTTTTTCATCCAATAG+TGG | + | chr1_4:25414539-25414558 | Msa0157600:intron | 30.0% |
| !! | TTGGTCTTATATGATATTGG+CGG | - | chr1_4:25414701-25414720 | None:intergenic | 30.0% |
| AACAGAAAAGAAACACTAAC+TGG | - | chr1_4:25415119-25415138 | None:intergenic | 30.0% | |
| CGATGATGACATTATAACTA+AGG | - | chr1_4:25415212-25415231 | None:intergenic | 30.0% | |
| ! | TGTCATCATCGATTATTGAA+CGG | + | chr1_4:25415221-25415240 | Msa0157600:intron | 30.0% |
| ATTAAGACAAACACAAAAGG+TGG | - | chr1_4:25415287-25415306 | None:intergenic | 30.0% | |
| TTGTCTGTGTGAATCTAAAT+AGG | + | chr1_4:25415316-25415335 | Msa0157600:intron | 30.0% | |
| TTAATGTGGAAAATATGCGA+GGG | + | chr1_4:25415448-25415467 | Msa0157600:intron | 30.0% | |
| GAAAACAGTAAACATGATGA+TGG | + | chr1_4:25415757-25415776 | Msa0157600:intron | 30.0% | |
| !! | AGTTCTAAGTTAAGTAGAGA+TGG | + | chr1_4:25415804-25415823 | Msa0157600:intron | 30.0% |
| ! | TTGTTTTCAGTCATGTCTTA+TGG | - | chr1_4:25416102-25416121 | None:intergenic | 30.0% |
| ATGACTGAAAACAATGATAG+AGG | + | chr1_4:25416108-25416127 | Msa0157600:intron | 30.0% | |
| !! | CATTTGAGATCTCACATTTT+TGG | + | chr1_4:25416366-25416385 | Msa0157600:intron | 30.0% |
| ! | AACAATTTTGCTTCCTTAAC+TGG | + | chr1_4:25416664-25416683 | Msa0157600:intron | 30.0% |
| GAATAAAAACTAGTACTAGG+AGG | - | chr1_4:25416697-25416716 | None:intergenic | 30.0% | |
| GTGGAATAAAAACTAGTACT+AGG | - | chr1_4:25416700-25416719 | None:intergenic | 30.0% | |
| GATAATACACATCATGTTTG+CGG | + | chr1_4:25416851-25416870 | Msa0157600:intron | 30.0% | |
| GTTTATCATCAAAAGCTTCT+TGG | + | chr1_4:25416904-25416923 | Msa0157600:intron | 30.0% | |
| TATGGTCGAAAACAAGTAAA+AGG | - | chr1_4:25416940-25416959 | None:intergenic | 30.0% | |
| TGTATTACATCATCTGATAC+TGG | + | chr1_4:25416971-25416990 | Msa0157600:intron | 30.0% | |
| !! | TTTTGAGTCTTGCTAACAAT+TGG | + | chr1_4:25417522-25417541 | Msa0157600:intron | 30.0% |
| AATACTCCTTTCTTATAGGA+TGG | + | chr1_4:25417579-25417598 | Msa0157600:intron | 30.0% | |
| GTTAAAATGTTGTATGAGGA+AGG | + | chr1_4:25417804-25417823 | Msa0157600:intron | 30.0% | |
| TCACATAGAATGAATGTACT+TGG | + | chr1_4:25418017-25418036 | Msa0157600:intron | 30.0% | |
| TGAATCTTAATCTTCACTGA+TGG | - | chr1_4:25418189-25418208 | None:intergenic | 30.0% | |
| ACAACAAGATGCAATATTGA+TGG | + | chr1_4:25418237-25418256 | Msa0157600:intron | 30.0% | |
| ATGAGAAAAATAGGACACAA+TGG | + | chr1_4:25418334-25418353 | Msa0157600:intron | 30.0% | |
| TGAGAAAAATAGGACACAAT+GGG | + | chr1_4:25418335-25418354 | Msa0157600:intron | 30.0% | |
| !!! | ATTGGTAGTTTTAACCACTT+TGG | - | chr1_4:25418745-25418764 | None:intergenic | 30.0% |
| TGAAGTTAACATAGTTCTCA+TGG | - | chr1_4:25418940-25418959 | None:intergenic | 30.0% | |
| AAAGAATATTAGACCACCTA+AGG | - | chr1_4:25419242-25419261 | None:intergenic | 30.0% | |
| !! | CAAATAAACATGGTTAGTCT+AGG | - | chr1_4:25419315-25419334 | None:intergenic | 30.0% |
| ! | TTAGGTCTAAGTTGAAAGTT+AGG | + | chr1_4:25419345-25419364 | Msa0157600:intron | 30.0% |
| ! | TAGGTCTAAGTTGAAAGTTA+GGG | + | chr1_4:25419346-25419365 | Msa0157600:intron | 30.0% |
| TAAACAAGGGTTACAAATTC+TGG | - | chr1_4:25419663-25419682 | None:intergenic | 30.0% | |
| TTGTTACTCAAGACAAAATC+GGG | - | chr1_4:25419755-25419774 | None:intergenic | 30.0% | |
| !! | CAATTTTAGGAACCCTAATT+TGG | - | chr1_4:25419783-25419802 | None:intergenic | 30.0% |
| ! | CTATTTCGTGACACAATTTT+AGG | - | chr1_4:25419796-25419815 | None:intergenic | 30.0% |
| ATGAACAAAGAAGAAGAAGA+TGG | + | chr1_4:25420047-25420066 | Msa0157600:intron | 30.0% | |
| TTAGTATCAAAATTTCCCGA+CGG | - | chr1_4:25420191-25420210 | None:intergenic | 30.0% | |
| CAACTTTGCTTTCTCTTATT+AGG | + | chr1_4:25420233-25420252 | Msa0157600:intron | 30.0% | |
| !!! | GAAACTTCCTTCTCTTTTTT+GGG | + | chr1_4:25420255-25420274 | Msa0157600:intron | 30.0% |
| TTAAATTTAGCCAACCAATC+AGG | - | chr1_4:25420325-25420344 | None:intergenic | 30.0% | |
| TGACAATGAAAACGAAATGA+AGG | - | chr1_4:25420557-25420576 | None:intergenic | 30.0% | |
| ACTAAATGAGTGGGAATAAA+TGG | + | chr1_4:25420998-25421017 | Msa0157600:intron | 30.0% | |
| ! | ATTTGGGATGCTATTGAAAA+TGG | - | chr1_4:25421025-25421044 | None:intergenic | 30.0% |
| GGGAATTGATTGTGATATTT+GGG | - | chr1_4:25421041-25421060 | None:intergenic | 30.0% | |
| AGGGAATTGATTGTGATATT+TGG | - | chr1_4:25421042-25421061 | None:intergenic | 30.0% | |
| TTAAGGATTAATCGTCTCAA+GGG | - | chr1_4:25421160-25421179 | None:intergenic | 30.0% | |
| !!! | TGTGCTTAGCGTTTTTTTTT+TGG | - | chr1_4:25421313-25421332 | None:intergenic | 30.0% |
| TACGTACAATATGCATAAGT+TGG | + | chr1_4:25421678-25421697 | Msa0157600:intron | 30.0% | |
| GAATAGGATTATAGGATTGA+AGG | - | chr1_4:25421852-25421871 | None:intergenic | 30.0% | |
| ! | CTGAATTGGCTTAATTGAAT+AGG | - | chr1_4:25421868-25421887 | None:intergenic | 30.0% |
| ! | TGCAATCTTATTTGCTGAAT+TGG | - | chr1_4:25421882-25421901 | None:intergenic | 30.0% |
| ACATTGGATATATAAGAGAG+GGG | + | chr1_4:25422447-25422466 | Msa0157600:intron | 30.0% | |
| GAGTGATGAAAATAAACCAA+CGG | + | chr1_4:25422721-25422740 | Msa0157600:intron | 30.0% | |
| !! | GGTTTTATAAAGCATTAGCT+AGG | - | chr1_4:25422797-25422816 | None:intergenic | 30.0% |
| AAACAAAAGAAACAAAGCGA+TGG | - | chr1_4:25422856-25422875 | None:intergenic | 30.0% | |
| GGAATTGAACTGAGAAAATA+GGG | - | chr1_4:25422886-25422905 | None:intergenic | 30.0% | |
| TGGAATTGAACTGAGAAAAT+AGG | - | chr1_4:25422887-25422906 | None:intergenic | 30.0% | |
| GATCGATTGAATGATGAAAA+TGG | - | chr1_4:25422953-25422972 | None:intergenic | 30.0% | |
| AAGAATAGGGTTTGAACTTA+GGG | - | chr1_4:25423046-25423065 | None:intergenic | 30.0% | |
| TGAGAAGAAGTTGAAGAATA+GGG | - | chr1_4:25423059-25423078 | None:intergenic | 30.0% | |
| !! | TGGATCTGTTTGTTTGTTTT+AGG | - | chr1_4:25414389-25414408 | None:intergenic | 30.0% |
| CATAATCATGATCATGATGA+TGG | + | chr1_4:25423305-25423324 | Msa0157600:CDS | 30.0% | |
| TGTTACAAACATCACATGTA+TGG | - | chr1_4:25423343-25423362 | None:intergenic | 30.0% | |
| TACATGTGATGTTTGTAACA+AGG | + | chr1_4:25423343-25423362 | Msa0157600:CDS | 30.0% | |
| TATGAGATTTCATACTCCAA+AGG | + | chr1_4:25423397-25423416 | Msa0157600:CDS | 30.0% | |
| ATGAGATTTCATACTCCAAA+GGG | + | chr1_4:25423398-25423417 | Msa0157600:CDS | 30.0% | |
| TCTCTAACCTTGATATTGAA+GGG | + | chr1_4:25423843-25423862 | Msa0157600:CDS | 30.0% | |
| TCATCTTCAAAATCATCACT+TGG | - | chr1_4:25423941-25423960 | None:intergenic | 30.0% | |
| TTCATGATGTTGTGAGTGTT+TGG | - | chr1_4:25414158-25414177 | None:intergenic | 35.0% | |
| !! | TCTGTTGGTGATAATGATCA+TGG | - | chr1_4:25414235-25414254 | None:intergenic | 35.0% |
| TATCATCTTCAAGAGTCTGT+TGG | - | chr1_4:25414250-25414269 | None:intergenic | 35.0% | |
| GAAGATGATAAGAAAAACCC+AGG | + | chr1_4:25414260-25414279 | Msa0157600:intron | 35.0% | |
| AACTGTAGATTCTTGAACCT+GGG | - | chr1_4:25414280-25414299 | None:intergenic | 35.0% | |
| CATGATCATGCTGTGAATAA+CGG | + | chr1_4:25414407-25414426 | Msa0157600:CDS | 35.0% | |
| TCATCCAATAGTGGTTTGAA+TGG | + | chr1_4:25414548-25414567 | Msa0157600:CDS | 35.0% | |
| ATGTCCATTCAAACCACTAT+TGG | - | chr1_4:25414555-25414574 | None:intergenic | 35.0% | |
| GTTTGAATGGACATATGAGA+TGG | + | chr1_4:25414561-25414580 | Msa0157600:CDS | 35.0% | |
| TATGAGATGGCATACTCAAA+AGG | + | chr1_4:25414574-25414593 | Msa0157600:CDS | 35.0% | |
| ATGAGATGGCATACTCAAAA+GGG | + | chr1_4:25414575-25414594 | Msa0157600:CDS | 35.0% | |
| GTTATGAGGGATCAACTAAA+AGG | + | chr1_4:25414810-25414829 | Msa0157600:intron | 35.0% | |
| ! | GGATGATAATGAGAAGATGA+AGG | + | chr1_4:25414856-25414875 | Msa0157600:CDS | 35.0% |
| AATGAGAAGATGAAGGAACA+AGG | + | chr1_4:25414863-25414882 | Msa0157600:CDS | 35.0% | |
| TTGCCACAACGAAAAAAACT+TGG | + | chr1_4:25414907-25414926 | Msa0157600:CDS | 35.0% | |
| !!! | GAACCAAGTTTTTTTCGTTG+TGG | - | chr1_4:25414913-25414932 | None:intergenic | 35.0% |
| !! | ACGAAAAAAACTTGGTTCTG+AGG | + | chr1_4:25414915-25414934 | Msa0157600:CDS | 35.0% |
| AGCGAAGATGAAACTGAATT+AGG | + | chr1_4:25415031-25415050 | Msa0157600:CDS | 35.0% | |
| GCGAAGATGAAACTGAATTA+GGG | + | chr1_4:25415032-25415051 | Msa0157600:CDS | 35.0% | |
| TCATCTTCGAAATCATCACT+TGG | - | chr1_4:25415094-25415113 | None:intergenic | 35.0% | |
| GAATTGAGGGTTGAAATTGA+TGG | + | chr1_4:25415372-25415391 | Msa0157600:intron | 35.0% | |
| ATGAGTTTACTGTCAAAGAG+TGG | + | chr1_4:25415424-25415443 | Msa0157600:intron | 35.0% | |
| CTTAATGTGGAAAATATGCG+AGG | + | chr1_4:25415447-25415466 | Msa0157600:intron | 35.0% | |
| ! | TTATGGTTTGGAACTTTCAG+TGG | + | chr1_4:25415559-25415578 | Msa0157600:intron | 35.0% |
| !! | CAGTAAACATGATGATGGAA+AGG | + | chr1_4:25415762-25415781 | Msa0157600:intron | 35.0% |
| ACCTAGATTACTTGGACTAT+TGG | + | chr1_4:25416165-25416184 | Msa0157600:intron | 35.0% | |
| ACCAATAGTCCAAGTAATCT+AGG | - | chr1_4:25416169-25416188 | None:intergenic | 35.0% | |
| GAATCAGATACGAAAAATGC+AGG | - | chr1_4:25416232-25416251 | None:intergenic | 35.0% | |
| !!! | GCTTGTGTCACTTTTTACTA+TGG | + | chr1_4:25416476-25416495 | Msa0157600:intron | 35.0% |
| !! | ACTTAAGAAGTCACTGACTT+TGG | + | chr1_4:25416553-25416572 | Msa0157600:intron | 35.0% |
| TGGAGCAAAATTATTGTGAC+TGG | + | chr1_4:25416573-25416592 | Msa0157600:intron | 35.0% | |
| ! | AACAATGTGTTTAGGATCTG+TGG | - | chr1_4:25416722-25416741 | None:intergenic | 35.0% |
| GGAATGAAACAATTGTGCAT+TGG | + | chr1_4:25416992-25417011 | Msa0157600:intron | 35.0% | |
| !! | TACAGGTTGATGAAAGAAGA+AGG | + | chr1_4:25417168-25417187 | Msa0157600:intron | 35.0% |
| !!! | TCCACTTTTGAAGTTGATGA+AGG | + | chr1_4:25417362-25417381 | Msa0157600:CDS | 35.0% |
| TCCTTCATCAACTTCAAAAG+TGG | - | chr1_4:25417366-25417385 | None:intergenic | 35.0% | |
| !! | TTGAAGTTGATGAAGGAAGA+AGG | + | chr1_4:25417369-25417388 | Msa0157600:CDS | 35.0% |
| !! | TGAAGTTGATGAAGGAAGAA+GGG | + | chr1_4:25417370-25417389 | Msa0157600:CDS | 35.0% |
| ! | AGTATAATGGCAGAGTTGAT+GGG | - | chr1_4:25417444-25417463 | None:intergenic | 35.0% |
| AGTCTTGCTAACAATTGGTT+TGG | + | chr1_4:25417527-25417546 | Msa0157600:intron | 35.0% | |
| ! | GTCTTGCTAACAATTGGTTT+GGG | + | chr1_4:25417528-25417547 | Msa0157600:intron | 35.0% |
| !! | TTGGTTTGGGAATCGATAAT+TGG | + | chr1_4:25417541-25417560 | Msa0157600:intron | 35.0% |
| TGGATTCCATCCTATAAGAA+AGG | - | chr1_4:25417588-25417607 | None:intergenic | 35.0% | |
| ! | TGTTACTTCCACAAACCTAA+TGG | - | chr1_4:25417760-25417779 | None:intergenic | 35.0% |
| AAATGTTGTATGAGGAAGGA+CGG | + | chr1_4:25417808-25417827 | Msa0157600:intron | 35.0% | |
| TGGACCAAATATGAAACATG+TGG | + | chr1_4:25417848-25417867 | Msa0157600:intron | 35.0% | |
| GGACCAAATATGAAACATGT+GGG | + | chr1_4:25417849-25417868 | Msa0157600:intron | 35.0% | |
| TAAGACATTCACCACATCTA+GGG | - | chr1_4:25417925-25417944 | None:intergenic | 35.0% | |
| ATAAGACATTCACCACATCT+AGG | - | chr1_4:25417926-25417945 | None:intergenic | 35.0% | |
| AGAACAATATTGTTTGGCTG+AGG | + | chr1_4:25418668-25418687 | Msa0157600:intron | 35.0% | |
| GAACAATATTGTTTGGCTGA+GGG | + | chr1_4:25418669-25418688 | Msa0157600:intron | 35.0% | |
| AACAATATTGTTTGGCTGAG+GGG | + | chr1_4:25418670-25418689 | Msa0157600:intron | 35.0% | |
| TAATGCGCTCTCTATTTGAT+TGG | - | chr1_4:25418763-25418782 | None:intergenic | 35.0% | |
| TCTTATCATGAGCAAAGAAG+AGG | + | chr1_4:25418840-25418859 | Msa0157600:intron | 35.0% | |
| CTTATCATGAGCAAAGAAGA+GGG | + | chr1_4:25418841-25418860 | Msa0157600:intron | 35.0% | |
| AATATGAGAGAGATGAGATC+AGG | + | chr1_4:25419075-25419094 | Msa0157600:intron | 35.0% | |
| TAGGTGCAGTATACCAATTA+GGG | - | chr1_4:25419121-25419140 | None:intergenic | 35.0% | |
| ATAGGTGCAGTATACCAATT+AGG | - | chr1_4:25419122-25419141 | None:intergenic | 35.0% | |
| GAGAATCACTCGTAAGAAAT+AGG | - | chr1_4:25419140-25419159 | None:intergenic | 35.0% | |
| CTAAGTCAAGGGATTGATTA+GGG | - | chr1_4:25419189-25419208 | None:intergenic | 35.0% | |
| TTAGACCACCTAAGGAATTA+GGG | - | chr1_4:25419234-25419253 | None:intergenic | 35.0% | |
| ATTAGACCACCTAAGGAATT+AGG | - | chr1_4:25419235-25419254 | None:intergenic | 35.0% | |
| GGTGGTCTAATATTCTTTGA+AGG | + | chr1_4:25419244-25419263 | Msa0157600:intron | 35.0% | |
| !! | AAACATGGTTAGTCTAGGAA+TGG | - | chr1_4:25419310-25419329 | None:intergenic | 35.0% |
| CATAAACTGGTAAAGAATGG+AGG | + | chr1_4:25419587-25419606 | Msa0157600:intron | 35.0% | |
| AAAAACTGCTCCTAAAATCG+TGG | + | chr1_4:25419708-25419727 | Msa0157600:intron | 35.0% | |
| ATTGGTAAAACGTGTCATGA+TGG | - | chr1_4:25419819-25419838 | None:intergenic | 35.0% | |
| GTTGAAAACGTGTCAAGATT+TGG | - | chr1_4:25419866-25419885 | None:intergenic | 35.0% | |
| ACAAGCAAGCTTAAATAGCA+AGG | - | chr1_4:25419939-25419958 | None:intergenic | 35.0% | |
| AACAAAGAAGAAGATGGTGA+TGG | + | chr1_4:25420020-25420039 | Msa0157600:intron | 35.0% | |
| ATGGTAATCTCCCTATGTTT+CGG | + | chr1_4:25420066-25420085 | Msa0157600:intron | 35.0% | |
| ! | TTTCTTTAAGGACTTACCGT+CGG | + | chr1_4:25420172-25420191 | Msa0157600:intron | 35.0% |
| !!! | GGAAACTTCCTTCTCTTTTT+TGG | + | chr1_4:25420254-25420273 | Msa0157600:intron | 35.0% |
| AATAGACCGATATCCAATTG+AGG | - | chr1_4:25420391-25420410 | None:intergenic | 35.0% | |
| TCGGTCTATTTGCATATATC+TGG | + | chr1_4:25420401-25420420 | Msa0157600:intron | 35.0% | |
| CGGTCTATTTGCATATATCT+GGG | + | chr1_4:25420402-25420421 | Msa0157600:intron | 35.0% | |
| GGTCTATTTGCATATATCTG+GGG | + | chr1_4:25420403-25420422 | Msa0157600:intron | 35.0% | |
| !! | ATTGATGAAAGGAGTATCCA+AGG | + | chr1_4:25420649-25420668 | Msa0157600:intron | 35.0% |
| ! | AAGGTACTATTGAGGTCAAA+GGG | - | chr1_4:25420798-25420817 | None:intergenic | 35.0% |
| TACCTTCATGGGTCAATTTA+AGG | + | chr1_4:25420812-25420831 | Msa0157600:intron | 35.0% | |
| ACCTTCATGGGTCAATTTAA+GGG | + | chr1_4:25420813-25420832 | Msa0157600:intron | 35.0% | |
| GTTAAGGATTAATCGTCTCA+AGG | - | chr1_4:25421161-25421180 | None:intergenic | 35.0% | |
| ! | CCAGAAAATATATCTGAGGT+GGG | + | chr1_4:25421223-25421242 | Msa0157600:intron | 35.0% |
| AAAAAACGCTAAGCACAAAG+TGG | + | chr1_4:25421316-25421335 | Msa0157600:intron | 35.0% | |
| GATTGAAGGACCATATAAGA+TGG | - | chr1_4:25421838-25421857 | None:intergenic | 35.0% | |
| GAAGTTTAGTTATCCAACAG+AGG | + | chr1_4:25421974-25421993 | Msa0157600:intron | 35.0% | |
| ACTAGGAATGGAGAAAACAT+TGG | + | chr1_4:25422431-25422450 | Msa0157600:intron | 35.0% | |
| TCATGGAGTCAAAAGTTGTT+GGG | - | chr1_4:25422570-25422589 | None:intergenic | 35.0% | |
| ATGACTAGATCATTGACCTT+GGG | + | chr1_4:25422586-25422605 | Msa0157600:intron | 35.0% | |
| GAAGAATAGGGTTTGAACTT+AGG | - | chr1_4:25423047-25423066 | None:intergenic | 35.0% | |
| GTGAGAAGAAGTTGAAGAAT+AGG | - | chr1_4:25423060-25423079 | None:intergenic | 35.0% | |
| ! | ATTCTTGAACCTGGGTTTTT+GGG | - | chr1_4:25414272-25414291 | None:intergenic | 35.0% |
| AACTGTAGATTCTTGAACCT+GGG | - | chr1_4:25414280-25414299 | None:intergenic | 35.0% | |
| TGTCACAAAACATTTACCTC+TGG | + | chr1_4:25423134-25423153 | Msa0157600:CDS | 35.0% | |
| TTTACCTCTGGTAAATCACT+TGG | + | chr1_4:25423146-25423165 | Msa0157600:CDS | 35.0% | |
| !! | AGGTTTAAGAAGAGTGTTGA+AGG | - | chr1_4:25423195-25423214 | None:intergenic | 35.0% |
| CATGATCATGCTGTGAATAA+CGG | + | chr1_4:25414407-25414426 | Msa0157600:CDS | 35.0% | |
| ACATCACATGTATGGTTCTT+CGG | - | chr1_4:25423335-25423354 | None:intergenic | 35.0% | |
| TACTCCAAAGGGTTTGAATA+AGG | + | chr1_4:25423409-25423428 | Msa0157600:CDS | 35.0% | |
| ACTCCAAAGGGTTTGAATAA+GGG | + | chr1_4:25423410-25423429 | Msa0157600:CDS | 35.0% | |
| !! | TTGGTCTTATACGATATTGG+CGG | - | chr1_4:25423524-25423543 | None:intergenic | 35.0% |
| ! | TATTCCTGATGATGATGATG+AGG | + | chr1_4:25423568-25423587 | Msa0157600:CDS | 35.0% |
| ATTTCCTCATCATCATCATC+AGG | - | chr1_4:25423575-25423594 | None:intergenic | 35.0% | |
| ATTATCATCCACAGTATTGC+TGG | - | chr1_4:25423693-25423712 | None:intergenic | 35.0% | |
| ! | GGATGATAATGAGAAGATGA+AGG | + | chr1_4:25414856-25414875 | Msa0157600:CDS | 35.0% |
| AATGAGAAGATGAAGGAACA+AGG | + | chr1_4:25414863-25414882 | Msa0157600:CDS | 35.0% | |
| TCAAACATCACAAGATTCCA+AGG | + | chr1_4:25423811-25423830 | Msa0157600:CDS | 35.0% | |
| GTCTCTAACCTTGATATTGA+AGG | + | chr1_4:25423842-25423861 | Msa0157600:CDS | 35.0% | |
| TCTTCTTCCCTTCAATATCA+AGG | - | chr1_4:25423853-25423872 | None:intergenic | 35.0% | |
| ! | ATGTTGTGAGTGTTTGGTTC+AGG | - | chr1_4:25414152-25414171 | None:intergenic | 40.0% |
| TCAAACGAATGGTGAGAAGA+AGG | - | chr1_4:25414197-25414216 | None:intergenic | 40.0% | |
| CAACTGTAGATTCTTGAACC+TGG | - | chr1_4:25414281-25414300 | None:intergenic | 40.0% | |
| TGTCACAAAACATTCACCTC+TGG | + | chr1_4:25414308-25414327 | Msa0157600:CDS | 40.0% | |
| TTCACCTCTGGTAAATCACT+TGG | + | chr1_4:25414320-25414339 | Msa0157600:CDS | 40.0% | |
| CGTTATTCACAGCATGATCA+TGG | - | chr1_4:25414409-25414428 | None:intergenic | 40.0% | |
| TACTCAAAAGGGTTCGAAGA+AGG | + | chr1_4:25414586-25414605 | Msa0157600:CDS | 40.0% | |
| ACTCAAAAGGGTTCGAAGAA+GGG | + | chr1_4:25414587-25414606 | Msa0157600:CDS | 40.0% | |
| ACTTTGTTCCAAGGAAGATG+GGG | - | chr1_4:25414636-25414655 | None:intergenic | 40.0% | |
| GACTTTGTTCCAAGGAAGAT+GGG | - | chr1_4:25414637-25414656 | None:intergenic | 40.0% | |
| TGACTTTGTTCCAAGGAAGA+TGG | - | chr1_4:25414638-25414657 | None:intergenic | 40.0% | |
| !! | CTCAAGTTGACTTTGTTCCA+AGG | - | chr1_4:25414645-25414664 | None:intergenic | 40.0% |
| TACTTTGACAAGTCAGTGGA+TGG | - | chr1_4:25414674-25414693 | None:intergenic | 40.0% | |
| CAAGTACTTTGACAAGTCAG+TGG | - | chr1_4:25414678-25414697 | None:intergenic | 40.0% | |
| ! | GCGTATTGCTGATAATGATG+AGG | + | chr1_4:25414742-25414761 | Msa0157600:CDS | 40.0% |
| TATGTCTTATGGGGGTTATG+AGG | + | chr1_4:25414796-25414815 | Msa0157600:intron | 40.0% | |
| ATGTCTTATGGGGGTTATGA+GGG | + | chr1_4:25414797-25414816 | Msa0157600:intron | 40.0% | |
| GCAGAAGATTTCCAGCAATA+CGG | + | chr1_4:25414832-25414851 | Msa0157600:CDS | 40.0% | |
| ATTATCATCCACCGTATTGC+TGG | - | chr1_4:25414846-25414865 | None:intergenic | 40.0% | |
| TCAAACATCGCAAGATTGCA+AGG | + | chr1_4:25414964-25414983 | Msa0157600:CDS | 40.0% | |
| GGATCTAGCTGTGATATTGA+AGG | + | chr1_4:25414995-25415014 | Msa0157600:CDS | 40.0% | |
| AATTAGGGTCAAGAGTTGTC+AGG | + | chr1_4:25415047-25415066 | Msa0157600:intron | 40.0% | |
| TGTCAAAGAGTGGCTTAATG+TGG | + | chr1_4:25415434-25415453 | Msa0157600:intron | 40.0% | |
| TGGAAAATATGCGAGGGTTA+AGG | + | chr1_4:25415454-25415473 | Msa0157600:intron | 40.0% | |
| GACGGAACTGCATGAATAAT+TGG | + | chr1_4:25416073-25416092 | Msa0157600:intron | 40.0% | |
| AAACAATGATAGAGGAACCG+AGG | + | chr1_4:25416116-25416135 | Msa0157600:intron | 40.0% | |
| CCAAGTAATCTAGGTGACTT+TGG | - | chr1_4:25416160-25416179 | None:intergenic | 40.0% | |
| CCAAAGTCACCTAGATTACT+TGG | + | chr1_4:25416157-25416176 | Msa0157600:intron | 40.0% | |
| ! | GAAAAATGCAGGCAGCTTTT+AGG | - | chr1_4:25416221-25416240 | None:intergenic | 40.0% |
| CTTCAATAACCATACCAACC+TGG | - | chr1_4:25416434-25416453 | None:intergenic | 40.0% | |
| !!! | GTGTCACTTTTTACTATGGC+TGG | + | chr1_4:25416480-25416499 | Msa0157600:intron | 40.0% |
| !! | CACTTTTTACTATGGCTGGA+AGG | + | chr1_4:25416484-25416503 | Msa0157600:intron | 40.0% |
| GTATCAATGTCATGTATGCC+TGG | - | chr1_4:25416521-25416540 | None:intergenic | 40.0% | |
| TTTGCTTCCTTAACTGGATC+TGG | + | chr1_4:25416670-25416689 | Msa0157600:intron | 40.0% | |
| ! | AATGTGTTTAGGATCTGTGG+TGG | - | chr1_4:25416719-25416738 | None:intergenic | 40.0% |
| TCCTCCATATAATTCCAGAC+AGG | + | chr1_4:25416800-25416819 | Msa0157600:intron | 40.0% | |
| ! | TCCTGTCTGGAATTATATGG+AGG | - | chr1_4:25416804-25416823 | None:intergenic | 40.0% |
| ! | GGTTCCTGTCTGGAATTATA+TGG | - | chr1_4:25416807-25416826 | None:intergenic | 40.0% |
| ! | ATAGCTAATTGGTTCCTGTC+TGG | - | chr1_4:25416817-25416836 | None:intergenic | 40.0% |
| GGTCGAAAACAAGTAAAAGG+AGG | - | chr1_4:25416937-25416956 | None:intergenic | 40.0% | |
| ACGAATTGTGTTATATGCCC+AGG | + | chr1_4:25417114-25417133 | Msa0157600:intron | 40.0% | |
| CGAATTGTGTTATATGCCCA+GGG | + | chr1_4:25417115-25417134 | Msa0157600:intron | 40.0% | |
| ! | CTGTAAGCTAGACTAGTTAG+CGG | - | chr1_4:25417153-25417172 | None:intergenic | 40.0% |
| GTTGGAGTTGAAGAGAGAAA+TGG | - | chr1_4:25417227-25417246 | None:intergenic | 40.0% | |
| GCACATGAAAGCAACTGTTA+CGG | + | chr1_4:25417309-25417328 | Msa0157600:CDS | 40.0% | |
| ATGAAAGCAACTGTTACGGA+AGG | + | chr1_4:25417313-25417332 | Msa0157600:CDS | 40.0% | |
| TTACGGAAGGATGATCATAG+AGG | + | chr1_4:25417326-25417345 | Msa0157600:CDS | 40.0% | |
| ! | GATGGGTTTGAGTATACGAA+TGG | - | chr1_4:25417427-25417446 | None:intergenic | 40.0% |
| GAGTATAATGGCAGAGTTGA+TGG | - | chr1_4:25417445-25417464 | None:intergenic | 40.0% | |
| GGCGTTTGTGATGAGTATAA+TGG | - | chr1_4:25417457-25417476 | None:intergenic | 40.0% | |
| AATCACACGAAGAAGGTAAC+TGG | - | chr1_4:25417726-25417745 | None:intergenic | 40.0% | |
| GATTCCTGTCTGTTACCATT+AGG | + | chr1_4:25417742-25417761 | Msa0157600:intron | 40.0% | |
| CAAACCTAATGGTAACAGAC+AGG | - | chr1_4:25417749-25417768 | None:intergenic | 40.0% | |
| GTCTGTTACCATTAGGTTTG+TGG | + | chr1_4:25417749-25417768 | Msa0157600:intron | 40.0% | |
| !! | AGATAGAAAGGAACGGATTG+AGG | - | chr1_4:25417784-25417803 | None:intergenic | 40.0% |
| AATGTTGTATGAGGAAGGAC+GGG | + | chr1_4:25417809-25417828 | Msa0157600:intron | 40.0% | |
| GTGAATGTCTTATGACAGTC+CGG | + | chr1_4:25417933-25417952 | Msa0157600:intron | 40.0% | |
| TTGCAACAAGGACATCAAGT+GGG | + | chr1_4:25417975-25417994 | Msa0157600:intron | 40.0% | |
| AATCCTCTGTTTCCCCTAAT+TGG | + | chr1_4:25419105-25419124 | Msa0157600:intron | 40.0% | |
| ATACCAATTAGGGGAAACAG+AGG | - | chr1_4:25419111-25419130 | None:intergenic | 40.0% | |
| AGGTGCAGTATACCAATTAG+GGG | - | chr1_4:25419120-25419139 | None:intergenic | 40.0% | |
| CCTAAGTCAAGGGATTGATT+AGG | - | chr1_4:25419190-25419209 | None:intergenic | 40.0% | |
| CCTAATCAATCCCTTGACTT+AGG | + | chr1_4:25419187-25419206 | Msa0157600:intron | 40.0% | |
| !! | AGAAGAGTGTCCTAAGTCAA+GGG | - | chr1_4:25419200-25419219 | None:intergenic | 40.0% |
| ACTACAACCCCTAATTCCTT+AGG | + | chr1_4:25419223-25419242 | Msa0157600:intron | 40.0% | |
| TAGACCACCTAAGGAATTAG+GGG | - | chr1_4:25419233-25419252 | None:intergenic | 40.0% | |
| TGATGAGGTTCATTCGACAT+TGG | - | chr1_4:25419837-25419856 | None:intergenic | 40.0% | |
| ! | AAGATTTGGAGCACATGATG+AGG | - | chr1_4:25419852-25419871 | None:intergenic | 40.0% |
| AAAGCTCAAGCCGAAACATA+GGG | - | chr1_4:25420079-25420098 | None:intergenic | 40.0% | |
| AAAAGCTCAAGCCGAAACAT+AGG | - | chr1_4:25420080-25420099 | None:intergenic | 40.0% | |
| TGAGGGATGATTGATCAAAG+AGG | + | chr1_4:25420124-25420143 | Msa0157600:intron | 40.0% | |
| ! | TTCTTTAAGGACTTACCGTC+GGG | + | chr1_4:25420173-25420192 | Msa0157600:intron | 40.0% |
| AGAGAAAGCAAAGTTGCATG+AGG | - | chr1_4:25420229-25420248 | None:intergenic | 40.0% | |
| GAGACTTCCCAAAAAAGAGA+AGG | - | chr1_4:25420265-25420284 | None:intergenic | 40.0% | |
| GAAGGTGAATGAATCCTGAT+TGG | + | chr1_4:25420308-25420327 | Msa0157600:intron | 40.0% | |
| GTGAATGAATCCTGATTGGT+TGG | + | chr1_4:25420312-25420331 | Msa0157600:intron | 40.0% | |
| !! | ATGTCGACTCGTTGAAGTTA+TGG | + | chr1_4:25420353-25420372 | Msa0157600:intron | 40.0% |
| ACCGATATCCAATTGAGGAT+GGG | - | chr1_4:25420386-25420405 | None:intergenic | 40.0% | |
| TGTGCAAGGCAAGCAATATA+TGG | - | chr1_4:25420707-25420726 | None:intergenic | 40.0% | |
| !! | GAAAGCATTCAAGATGTGCA+AGG | - | chr1_4:25420721-25420740 | None:intergenic | 40.0% |
| AGGTACTATTGAGGTCAAAG+GGG | - | chr1_4:25420797-25420816 | None:intergenic | 40.0% | |
| !! | GAAGGTACTATTGAGGTCAA+AGG | - | chr1_4:25420799-25420818 | None:intergenic | 40.0% |
| TGACCTCAATAGTACCTTCA+TGG | + | chr1_4:25420800-25420819 | Msa0157600:intron | 40.0% | |
| GACCTCAATAGTACCTTCAT+GGG | + | chr1_4:25420801-25420820 | Msa0157600:intron | 40.0% | |
| ACCCTTAAATTGACCCATGA+AGG | - | chr1_4:25420817-25420836 | None:intergenic | 40.0% | |
| ATCAAATTGTACAACCGCCA+AGG | - | chr1_4:25420851-25420870 | None:intergenic | 40.0% | |
| CTCACCAATGCTTAATGAAG+CGG | + | chr1_4:25420882-25420901 | Msa0157600:intron | 40.0% | |
| ATCACCGCTTCATTAAGCAT+TGG | - | chr1_4:25420889-25420908 | None:intergenic | 40.0% | |
| ! | ATGGTGAAGGGTATGGTTAT+TGG | - | chr1_4:25421090-25421109 | None:intergenic | 40.0% |
| TCTTTCAATGGTGAAGGGTA+TGG | - | chr1_4:25421097-25421116 | None:intergenic | 40.0% | |
| TACCCTTCACCATTGAAAGA+TGG | + | chr1_4:25421097-25421116 | Msa0157600:intron | 40.0% | |
| ACCCTTCACCATTGAAAGAT+GGG | + | chr1_4:25421098-25421117 | Msa0157600:intron | 40.0% | |
| AATTGTCCCCCATCTTTCAA+TGG | - | chr1_4:25421109-25421128 | None:intergenic | 40.0% | |
| GAAAGATGGGGGACAATTTA+TGG | + | chr1_4:25421111-25421130 | Msa0157600:intron | 40.0% | |
| CAGAGCTTGAACTCTTGTTA+AGG | - | chr1_4:25421177-25421196 | None:intergenic | 40.0% | |
| GGAGCCAGAAAATATATCTG+AGG | + | chr1_4:25421219-25421238 | Msa0157600:intron | 40.0% | |
| GCCAGAAAATATATCTGAGG+TGG | + | chr1_4:25421222-25421241 | Msa0157600:intron | 40.0% | |
| ! | CCCACCTCAGATATATTTTC+TGG | - | chr1_4:25421226-25421245 | None:intergenic | 40.0% |
| ACATGCCAAGGAACTAAGAT+CGG | - | chr1_4:25421386-25421405 | None:intergenic | 40.0% | |
| GTGATAACTTCTACATGCCA+AGG | - | chr1_4:25421398-25421417 | None:intergenic | 40.0% | |
| GGGAGTGAAAAAGATGAAGA+TGG | - | chr1_4:25421467-25421486 | None:intergenic | 40.0% | |
| TATCCAACAGAGGAATGTGA+AGG | + | chr1_4:25421984-25422003 | Msa0157600:intron | 40.0% | |
| ATCCAACAGAGGAATGTGAA+GGG | + | chr1_4:25421985-25422004 | Msa0157600:intron | 40.0% | |
| AGTCACTTGTTCAACAACAG+CGG | - | chr1_4:25422135-25422154 | None:intergenic | 40.0% | |
| TGACTTCAAACACACAAGAG+TGG | + | chr1_4:25422150-25422169 | Msa0157600:intron | 40.0% | |
| GACTTCAAACACACAAGAGT+GGG | + | chr1_4:25422151-25422170 | Msa0157600:intron | 40.0% | |
| ACTTCAAACACACAAGAGTG+GGG | + | chr1_4:25422152-25422171 | Msa0157600:intron | 40.0% | |
| TAGTTCGGCCTAAAACAACA+AGG | + | chr1_4:25422356-25422375 | Msa0157600:intron | 40.0% | |
| !!! | AGACTAGGCCTTGTTGTTTT+AGG | - | chr1_4:25422367-25422386 | None:intergenic | 40.0% |
| AACCCAACAATGTCTAGACT+AGG | - | chr1_4:25422382-25422401 | None:intergenic | 40.0% | |
| ! | CCTTAAGGCATCAGGTATAT+GGG | - | chr1_4:25422474-25422493 | None:intergenic | 40.0% |
| ! | ACCTTAAGGCATCAGGTATA+TGG | - | chr1_4:25422475-25422494 | None:intergenic | 40.0% |
| ! | TACCTGATGCCTTAAGGTTT+TGG | + | chr1_4:25422477-25422496 | Msa0157600:intron | 40.0% |
| ! | ACCTGATGCCTTAAGGTTTT+GGG | + | chr1_4:25422478-25422497 | Msa0157600:intron | 40.0% |
| CATTTCCACCCAAAACCTTA+AGG | - | chr1_4:25422489-25422508 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTGGGTGGAAATG+TGG | + | chr1_4:25422489-25422508 | Msa0157600:intron | 40.0% |
| TCTAAATCTCTTTGTGGTCC+TGG | + | chr1_4:25422514-25422533 | Msa0157600:intron | 40.0% | |
| CATGGAGTCAAAAGTTGTTG+GGG | - | chr1_4:25422569-25422588 | None:intergenic | 40.0% | |
| GTCATGGAGTCAAAAGTTGT+TGG | - | chr1_4:25422571-25422590 | None:intergenic | 40.0% | |
| CAAGGTCAATGATCTAGTCA+TGG | - | chr1_4:25422587-25422606 | None:intergenic | 40.0% | |
| CATGACTAGATCATTGACCT+TGG | + | chr1_4:25422585-25422604 | Msa0157600:intron | 40.0% | |
| TGACTAGATCATTGACCTTG+GGG | + | chr1_4:25422587-25422606 | Msa0157600:intron | 40.0% | |
| AACTTCAACTTTGTCACCGT+TGG | - | chr1_4:25422740-25422759 | None:intergenic | 40.0% | |
| CTTCATGATCGATGTATCAG+TGG | - | chr1_4:25422907-25422926 | None:intergenic | 40.0% | |
| ! | TTTTGGGCTTGTCAAACGAA+TGG | - | chr1_4:25423082-25423101 | None:intergenic | 40.0% |
| ! | GATTCTTGAACCTGGGTTTT+TGG | - | chr1_4:25414273-25414292 | None:intergenic | 40.0% |
| CAACTGTAGATTCTTGAACC+TGG | - | chr1_4:25414281-25414300 | None:intergenic | 40.0% | |
| !! | TAAGAAGAGTGTTGAAGGAG+CGG | - | chr1_4:25423190-25423209 | None:intergenic | 40.0% |
| CGTTATTCACAGCATGATCA+TGG | - | chr1_4:25414409-25414428 | None:intergenic | 40.0% | |
| ! | TCATCCAACAACGCTTTGAA+TGG | + | chr1_4:25423371-25423390 | Msa0157600:CDS | 40.0% |
| !! | ATGTCCATTCAAAGCGTTGT+TGG | - | chr1_4:25423378-25423397 | None:intergenic | 40.0% |
| GTACCCTTATTCAAACCCTT+TGG | - | chr1_4:25423416-25423435 | None:intergenic | 40.0% | |
| TTGCTGGTAGAAACTCAAGA+TGG | - | chr1_4:25423481-25423500 | None:intergenic | 40.0% | |
| TACTTTGACAAGTCAGTTGC+TGG | - | chr1_4:25423497-25423516 | None:intergenic | 40.0% | |
| ACGGTGATTCACATCAAGAT+TGG | - | chr1_4:25423648-25423667 | None:intergenic | 40.0% | |
| GAAGATTTCCAGCAATACTG+TGG | + | chr1_4:25423682-25423701 | Msa0157600:CDS | 40.0% | |
| TTGCCACAACGAAAAGAACT+TGG | + | chr1_4:25423754-25423773 | Msa0157600:CDS | 40.0% | |
| ATATCAAGGTTAGAGACTGC+AGG | - | chr1_4:25423839-25423858 | None:intergenic | 40.0% | |
| ACCGAAGATGAAACCGAATT+AGG | + | chr1_4:25423878-25423897 | Msa0157600:CDS | 40.0% | |
| CCCTAATTCGGTTTCATCTT+CGG | - | chr1_4:25423882-25423901 | None:intergenic | 40.0% | |
| CCGAAGATGAAACCGAATTA+GGG | + | chr1_4:25423879-25423898 | Msa0157600:CDS | 40.0% | |
| TCGAAATTCCTGACAACTCT+TGG | - | chr1_4:25423905-25423924 | None:intergenic | 40.0% | |
| CTTCATGATCGATGTAGCAG+TGG | - | chr1_4:25413982-25414001 | None:intergenic | 45.0% | |
| ACCTCTGGTAAATCACTTGG+TGG | + | chr1_4:25414323-25414342 | Msa0157600:CDS | 45.0% | |
| ACCACCAAGTGATTTACCAG+AGG | - | chr1_4:25414327-25414346 | None:intergenic | 45.0% | |
| !! | AGGTTGAGGAAGAGTGTTAG+AGG | - | chr1_4:25414369-25414388 | None:intergenic | 45.0% |
| GATCATGCTGTGAATAACGG+CGG | + | chr1_4:25414410-25414429 | Msa0157600:CDS | 45.0% | |
| GAAGATTTCCAGCAATACGG+TGG | + | chr1_4:25414835-25414854 | Msa0157600:CDS | 45.0% | |
| ! | AACAAGGTGTGCTGCTAACA+AGG | + | chr1_4:25414879-25414898 | Msa0157600:CDS | 45.0% |
| ATATCACAGCTAGATCCTGC+AGG | - | chr1_4:25414992-25415011 | None:intergenic | 45.0% | |
| ! | TGGTTTGGAACTTTCAGTGG+TGG | + | chr1_4:25415562-25415581 | Msa0157600:intron | 45.0% |
| ! | TCTTCAGAAGTGTGTCCAAC+TGG | - | chr1_4:25415974-25415993 | None:intergenic | 45.0% |
| GTGATAACAATGCCAAAGCC+AGG | + | chr1_4:25416413-25416432 | Msa0157600:intron | 45.0% | |
| TAACAATGCCAAAGCCAGGT+TGG | + | chr1_4:25416417-25416436 | Msa0157600:intron | 45.0% | |
| TAACCATACCAACCTGGCTT+TGG | - | chr1_4:25416428-25416447 | None:intergenic | 45.0% | |
| ! | AGAGCTTTTTGCCCGAAACT+AGG | + | chr1_4:25416452-25416471 | Msa0157600:intron | 45.0% |
| TGACACAAGCTCCTAGTTTC+GGG | - | chr1_4:25416466-25416485 | None:intergenic | 45.0% | |
| GTGACACAAGCTCCTAGTTT+CGG | - | chr1_4:25416467-25416486 | None:intergenic | 45.0% | |
| GTCATGTATGCCTGGTGAAA+TGG | - | chr1_4:25416513-25416532 | None:intergenic | 45.0% | |
| TGGAACAAAGCAAACACACG+TGG | + | chr1_4:25417012-25417031 | Msa0157600:intron | 45.0% | |
| GCAAACACACGTGGAACTAA+AGG | + | chr1_4:25417021-25417040 | Msa0157600:intron | 45.0% | |
| GGCATGATGAACTGGGAAAT+CGG | + | chr1_4:25417071-25417090 | Msa0157600:intron | 45.0% | |
| ! | CGCTAACTAGTCTAGCTTAC+AGG | + | chr1_4:25417151-25417170 | Msa0157600:intron | 45.0% |
| TTCAACTCCAACATAAGCCG+CGG | + | chr1_4:25417235-25417254 | Msa0157600:intron | 45.0% | |
| CGGCAAATGAAGGAGACAAT+GGG | - | chr1_4:25417266-25417285 | None:intergenic | 45.0% | |
| TTCATGTGCCAGTAACACGA+GGG | - | chr1_4:25417298-25417317 | None:intergenic | 45.0% | |
| TTTCATGTGCCAGTAACACG+AGG | - | chr1_4:25417299-25417318 | None:intergenic | 45.0% | |
| GGAAGGATGATCATAGAGGA+AGG | + | chr1_4:25417330-25417349 | Msa0157600:CDS | 45.0% | |
| AGGATGATCATAGAGGAAGG+AGG | + | chr1_4:25417333-25417352 | Msa0157600:CDS | 45.0% | |
| GGATGATCATAGAGGAAGGA+GGG | + | chr1_4:25417334-25417353 | Msa0157600:CDS | 45.0% | |
| GATGATCATAGAGGAAGGAG+GGG | + | chr1_4:25417335-25417354 | Msa0157600:CDS | 45.0% | |
| TTCTTCTGTGCGCATAGTTG+CGG | - | chr1_4:25417478-25417497 | None:intergenic | 45.0% | |
| TGATCTTCAGCACGACACAT+CGG | - | chr1_4:25417623-25417642 | None:intergenic | 45.0% | |
| ACGAAGAAGGTAACTGGTAG+AGG | - | chr1_4:25417720-25417739 | None:intergenic | 45.0% | |
| AGACAGGAATCACACGAAGA+AGG | - | chr1_4:25417733-25417752 | None:intergenic | 45.0% | |
| CGGCCCACATGTTTCATATT+TGG | - | chr1_4:25417855-25417874 | None:intergenic | 45.0% | |
| TTCAACTCCAACCCTAGATG+TGG | + | chr1_4:25417911-25417930 | Msa0157600:intron | 45.0% | |
| ! | ACATTCACCACATCTAGGGT+TGG | - | chr1_4:25417921-25417940 | None:intergenic | 45.0% |
| GACCATGCAGATAGTAGAAC+CGG | - | chr1_4:25417955-25417974 | None:intergenic | 45.0% | |
| ! | ATCTGCATGGTCTTGCAACA+AGG | + | chr1_4:25417963-25417982 | Msa0157600:intron | 45.0% |
| CTTGCAACAAGGACATCAAG+TGG | + | chr1_4:25417974-25417993 | Msa0157600:intron | 45.0% | |
| ! | TGATGGATACAGCAAGAGAG+GGG | - | chr1_4:25418172-25418191 | None:intergenic | 45.0% |
| ! | CTGATGGATACAGCAAGAGA+GGG | - | chr1_4:25418173-25418192 | None:intergenic | 45.0% |
| ! | ACTGATGGATACAGCAAGAG+AGG | - | chr1_4:25418174-25418193 | None:intergenic | 45.0% |
| ATCATGAGCAAAGAAGAGGG+TGG | + | chr1_4:25418844-25418863 | Msa0157600:intron | 45.0% | |
| TATTGCCCTAGGCAGTTGAT+TGG | + | chr1_4:25419003-25419022 | Msa0157600:intron | 45.0% | |
| ATTGCCCTAGGCAGTTGATT+GGG | + | chr1_4:25419004-25419023 | Msa0157600:intron | 45.0% | |
| CAAACCCAATCAACTGCCTA+GGG | - | chr1_4:25419011-25419030 | None:intergenic | 45.0% | |
| TCAAACCCAATCAACTGCCT+AGG | - | chr1_4:25419012-25419031 | None:intergenic | 45.0% | |
| !! | GAGAAGAGTGTCCTAAGTCA+AGG | - | chr1_4:25419201-25419220 | None:intergenic | 45.0% |
| ACAACCCCTAATTCCTTAGG+TGG | + | chr1_4:25419226-25419245 | Msa0157600:intron | 45.0% | |
| ! | GGGTTACAAATTCTGGAGAG+AGG | - | chr1_4:25419656-25419675 | None:intergenic | 45.0% |
| ! | TCAAACCGTGCCACGATTTT+AGG | - | chr1_4:25419721-25419740 | None:intergenic | 45.0% |
| ! | GGCTTGAGCTTTTGTCAATG+CGG | + | chr1_4:25420087-25420106 | Msa0157600:intron | 45.0% |
| TTTACTCCTACTCTGCGAGA+AGG | + | chr1_4:25420286-25420305 | Msa0157600:intron | 45.0% | |
| GATTTCTCCCCATCCTCAAT+TGG | + | chr1_4:25420375-25420394 | Msa0157600:intron | 45.0% | |
| CCGATATCCAATTGAGGATG+GGG | - | chr1_4:25420385-25420404 | None:intergenic | 45.0% | |
| CCCCATCCTCAATTGGATAT+CGG | + | chr1_4:25420382-25420401 | Msa0157600:intron | 45.0% | |
| GACCGATATCCAATTGAGGA+TGG | - | chr1_4:25420387-25420406 | None:intergenic | 45.0% | |
| !! | GACCCATGAAGGTACTATTG+AGG | - | chr1_4:25420806-25420825 | None:intergenic | 45.0% |
| TACAACCGCCAAGGAAATGT+GGG | - | chr1_4:25420842-25420861 | None:intergenic | 45.0% | |
| CCCCATCTTTCAATGGTGAA+GGG | - | chr1_4:25421102-25421121 | None:intergenic | 45.0% | |
| CCCTTCACCATTGAAAGATG+GGG | + | chr1_4:25421099-25421118 | Msa0157600:intron | 45.0% | |
| CCTTCACCATTGAAAGATGG+GGG | + | chr1_4:25421100-25421119 | Msa0157600:intron | 45.0% | |
| ! | TGATGCCACTTGTTGAACAG+TGG | + | chr1_4:25421195-25421214 | Msa0157600:intron | 45.0% |
| CAAGGAACTAAGATCGGGTT+TGG | - | chr1_4:25421380-25421399 | None:intergenic | 45.0% | |
| CAAACCCGATCTTAGTTCCT+TGG | + | chr1_4:25421378-25421397 | Msa0157600:intron | 45.0% | |
| CATGCCAAGGAACTAAGATC+GGG | - | chr1_4:25421385-25421404 | None:intergenic | 45.0% | |
| TACCCTTCACATTCCTCTGT+TGG | - | chr1_4:25421990-25422009 | None:intergenic | 45.0% | |
| AACAGAGGAATGTGAAGGGT+AGG | + | chr1_4:25421989-25422008 | Msa0157600:intron | 45.0% | |
| ACAGAGGAATGTGAAGGGTA+GGG | + | chr1_4:25421990-25422009 | Msa0157600:intron | 45.0% | |
| AGGCCTAGTCTAGACATTGT+TGG | + | chr1_4:25422376-25422395 | Msa0157600:intron | 45.0% | |
| GGCCTAGTCTAGACATTGTT+GGG | + | chr1_4:25422377-25422396 | Msa0157600:intron | 45.0% | |
| TTCTCCATTCCTAGTCGATG+CGG | - | chr1_4:25422426-25422445 | None:intergenic | 45.0% | |
| CCCATATACCTGATGCCTTA+AGG | + | chr1_4:25422471-25422490 | Msa0157600:intron | 45.0% | |
| ! | ACCCAAAACCTTAAGGCATC+AGG | - | chr1_4:25422482-25422501 | None:intergenic | 45.0% |
| !!! | TGATGCCTTAAGGTTTTGGG+TGG | + | chr1_4:25422481-25422500 | Msa0157600:intron | 45.0% |
| GTGGCGTCTAAATCTCTTTG+TGG | + | chr1_4:25422508-25422527 | Msa0157600:intron | 45.0% | |
| TCAAAAGTTGTTGGGGAGTC+CGG | - | chr1_4:25422562-25422581 | None:intergenic | 45.0% | |
| AAACAAAGCGATGGAAAGCG+TGG | - | chr1_4:25422847-25422866 | None:intergenic | 45.0% | |
| TTTGACAAGCCCAAAAACCC+AGG | + | chr1_4:25423086-25423105 | Msa0157600:intron | 45.0% | |
| ACCTCTGGTAAATCACTTGG+TGG | + | chr1_4:25414323-25414342 | Msa0157600:CDS | 45.0% | |
| TCAGGAATATGCCTTCTCCT+GGG | - | chr1_4:25423557-25423576 | None:intergenic | 45.0% | |
| ATCAGGAATATGCCTTCTCC+TGG | - | chr1_4:25423558-25423577 | None:intergenic | 45.0% | |
| CTTGATGTGAATCACCGTCA+CGG | + | chr1_4:25423650-25423669 | Msa0157600:CDS | 45.0% | |
| TGAATCACCGTCACGGTAAA+AGG | + | chr1_4:25423657-25423676 | Msa0157600:CDS | 45.0% | |
| ! | TCTTCTGCCTTTTACCGTGA+CGG | - | chr1_4:25423667-25423686 | None:intergenic | 45.0% |
| AACAAGGTGTGATGCGAACA+AGG | + | chr1_4:25423726-25423745 | Msa0157600:CDS | 45.0% | |
| ! | GCACCAAGTTCTTTTCGTTG+TGG | - | chr1_4:25423760-25423779 | None:intergenic | 45.0% |
| !! | ACGAAAAGAACTTGGTGCTG+AGG | + | chr1_4:25423762-25423781 | Msa0157600:CDS | 45.0% |
| GACAACTCTTGGCCCTAATT+CGG | - | chr1_4:25423894-25423913 | None:intergenic | 45.0% | |
| AATTAGGGCCAAGAGTTGTC+AGG | + | chr1_4:25423894-25423913 | Msa0157600:CDS | 45.0% | |
| !!! | TTTTTATCTTTTTTTTTTTT+GGG | + | chr1_4:25418420-25418439 | Msa0157600:intron | 5.0% |
| !!! | AAAAAATTTTGAATTTTTTT+TGG | + | chr1_4:25422071-25422090 | Msa0157600:intron | 5.0% |
| !!! | AAAAATTTTGAATTTTTTTT+GGG | + | chr1_4:25422072-25422091 | Msa0157600:intron | 5.0% |
| AGTGTTAGAGGAGCGGTGAA+TGG | - | chr1_4:25414357-25414376 | None:intergenic | 50.0% | |
| !! | GAGGAAGAGTGTTAGAGGAG+CGG | - | chr1_4:25414364-25414383 | None:intergenic | 50.0% |
| AGACCAAAAAACGGAGTCCC+AGG | + | chr1_4:25414714-25414733 | Msa0157600:CDS | 50.0% | |
| !!! | TCTCCTGGGACTCCGTTTTT+TGG | - | chr1_4:25414720-25414739 | None:intergenic | 50.0% |
| AAAAACGGAGTCCCAGGAGA+AGG | + | chr1_4:25414720-25414739 | Msa0157600:CDS | 50.0% | |
| TCAGCAATACGCCTTCTCCT+GGG | - | chr1_4:25414734-25414753 | None:intergenic | 50.0% | |
| ATCAGCAATACGCCTTCTCC+TGG | - | chr1_4:25414735-25414754 | None:intergenic | 50.0% | |
| CAAGATTGCAAGGAACCTGC+AGG | + | chr1_4:25414974-25414993 | Msa0157600:CDS | 50.0% | |
| !! | ATGCCAAAGCCAGGTTGGTA+TGG | + | chr1_4:25416422-25416441 | Msa0157600:intron | 50.0% |
| TGGAAGGCTACCATTTCACC+AGG | + | chr1_4:25416500-25416519 | Msa0157600:intron | 50.0% | |
| AGGAGGTCCAGATCCAGTTA+AGG | - | chr1_4:25416680-25416699 | None:intergenic | 50.0% | |
| TTACAGCGTCCTGCATGACA+GGG | + | chr1_4:25417044-25417063 | Msa0157600:intron | 50.0% | |
| AGGGAACTGGCATGATGAAC+TGG | + | chr1_4:25417063-25417082 | Msa0157600:intron | 50.0% | |
| GGGAACTGGCATGATGAACT+GGG | + | chr1_4:25417064-25417083 | Msa0157600:intron | 50.0% | |
| GCGGCAATGTAACTTTCCCT+GGG | - | chr1_4:25417134-25417153 | None:intergenic | 50.0% | |
| AGCGGCAATGTAACTTTCCC+TGG | - | chr1_4:25417135-25417154 | None:intergenic | 50.0% | |
| GCGGCAAATGAAGGAGACAA+TGG | - | chr1_4:25417267-25417286 | None:intergenic | 50.0% | |
| ATCATAGAGGAAGGAGGGGT+GGG | + | chr1_4:25417339-25417358 | Msa0157600:CDS | 50.0% | |
| AAGACCGAGACAATGCTGCA+AGG | + | chr1_4:25417400-25417419 | Msa0157600:CDS | 50.0% | |
| AGACCGAGACAATGCTGCAA+GGG | + | chr1_4:25417401-25417420 | Msa0157600:CDS | 50.0% | |
| CACATCGGCAGGAAATGTCT+TGG | - | chr1_4:25417608-25417627 | None:intergenic | 50.0% | |
| CGGGTCGAGCAAGAAGATTA+TGG | + | chr1_4:25417828-25417847 | Msa0157600:intron | 50.0% | |
| GTCCGGTTCTACTATCTGCA+TGG | + | chr1_4:25417950-25417969 | Msa0157600:intron | 50.0% | |
| CAAGGACATCAAGTGGGATG+TGG | + | chr1_4:25417981-25418000 | Msa0157600:intron | 50.0% | |
| GACCTCGAGACTGAAGAACA+GGG | - | chr1_4:25419619-25419638 | None:intergenic | 50.0% | |
| AGACCTCGAGACTGAAGAAC+AGG | - | chr1_4:25419620-25419639 | None:intergenic | 50.0% | |
| CTGCTCCTAAAATCGTGGCA+CGG | + | chr1_4:25419713-25419732 | Msa0157600:intron | 50.0% | |
| ! | GCTTTTGTCAATGCGGCTGA+TGG | + | chr1_4:25420094-25420113 | Msa0157600:intron | 50.0% |
| CGGCTGATGGAGAAGAATGA+GGG | + | chr1_4:25420107-25420126 | Msa0157600:intron | 50.0% | |
| !! | AAGGGTGTCCCACATTTCCT+TGG | + | chr1_4:25420831-25420850 | Msa0157600:intron | 50.0% |
| GTACAACCGCCAAGGAAATG+TGG | - | chr1_4:25420843-25420862 | None:intergenic | 50.0% | |
| CCCCCATCTTTCAATGGTGA+AGG | - | chr1_4:25421103-25421122 | None:intergenic | 50.0% | |
| ! | TGCCACTTGTTGAACAGTGG+CGG | + | chr1_4:25421198-25421217 | Msa0157600:intron | 50.0% |
| ! | CGGGTTTGGTTGTAACTGAG+AGG | - | chr1_4:25421366-25421385 | None:intergenic | 50.0% |
| AGGAATGTGAAGGGTAGGGT+GGG | + | chr1_4:25421994-25422013 | Msa0157600:intron | 50.0% | |
| !!! | ATTTTTTTTGGGGTGGGCCG+TGG | + | chr1_4:25422083-25422102 | Msa0157600:intron | 50.0% |
| CACTTGTTCAACAACAGCGG+CGG | - | chr1_4:25422132-25422151 | None:intergenic | 50.0% | |
| !! | GATTATGTCCCGCATCGACT+AGG | + | chr1_4:25422414-25422433 | Msa0157600:intron | 50.0% |
| TCTCCATTCCTAGTCGATGC+GGG | - | chr1_4:25422425-25422444 | None:intergenic | 50.0% | |
| AAAAGTTGTTGGGGAGTCCG+GGG | - | chr1_4:25422560-25422579 | None:intergenic | 50.0% | |
| CAAAAGTTGTTGGGGAGTCC+GGG | - | chr1_4:25422561-25422580 | None:intergenic | 50.0% | |
| GATCATTGACCTTGGGGTCT+TGG | + | chr1_4:25422593-25422612 | Msa0157600:intron | 50.0% | |
| GCCACCAAGTGATTTACCAG+AGG | - | chr1_4:25423153-25423172 | None:intergenic | 50.0% | |
| !! | AGGAGCGGTGAATGGTTTTG+TGG | - | chr1_4:25414349-25414368 | None:intergenic | 50.0% |
| ! | AGTGTTGAAGGAGCGGTGAA+TGG | - | chr1_4:25423183-25423202 | None:intergenic | 50.0% |
| GCTCTGTTCCAAGGAAGATG+GGG | - | chr1_4:25423459-25423478 | None:intergenic | 50.0% | |
| GGCTCTGTTCCAAGGAAGAT+GGG | - | chr1_4:25423460-25423479 | None:intergenic | 50.0% | |
| ! | TGGCTCTGTTCCAAGGAAGA+TGG | - | chr1_4:25423461-25423480 | None:intergenic | 50.0% |
| ! | CTCAAGATGGCTCTGTTCCA+AGG | - | chr1_4:25423468-25423487 | None:intergenic | 50.0% |
| AGACCAAAAAACGGAGTCCC+AGG | + | chr1_4:25414714-25414733 | Msa0157600:CDS | 50.0% | |
| !!! | TCTCCTGGGACTCCGTTTTT+TGG | - | chr1_4:25414720-25414739 | None:intergenic | 50.0% |
| AAAAACGGAGTCCCAGGAGA+AGG | + | chr1_4:25414720-25414739 | Msa0157600:CDS | 50.0% | |
| GTTAGAGACTGCAGGTTCCT+TGG | - | chr1_4:25423831-25423850 | None:intergenic | 50.0% | |
| TCCAAGGAAGATGGGGCAGT+CGG | - | chr1_4:25414629-25414648 | None:intergenic | 55.0% | |
| GTTACAGCGTCCTGCATGAC+AGG | + | chr1_4:25417043-25417062 | Msa0157600:intron | 55.0% | |
| ATGCCAGTTCCCTGTCATGC+AGG | - | chr1_4:25417056-25417075 | None:intergenic | 55.0% | |
| ACTCCAACATAAGCCGCGGA+CGG | + | chr1_4:25417239-25417258 | Msa0157600:intron | 55.0% | |
| GATGTGGCAGCGGCAAATGA+AGG | - | chr1_4:25417276-25417295 | None:intergenic | 55.0% | |
| TAACACGAGGGATGTGGCAG+CGG | - | chr1_4:25417286-25417305 | None:intergenic | 55.0% | |
| TGCCACATCCCTCGTGTTAC+TGG | + | chr1_4:25417287-25417306 | Msa0157600:CDS | 55.0% | |
| TGCCAGTAACACGAGGGATG+TGG | - | chr1_4:25417292-25417311 | None:intergenic | 55.0% | |
| GATCATAGAGGAAGGAGGGG+TGG | + | chr1_4:25417338-25417357 | Msa0157600:CDS | 55.0% | |
| TGGCCCTTGCAGCATTGTCT+CGG | - | chr1_4:25417407-25417426 | None:intergenic | 55.0% | |
| TGGCCGAGTTCTATCGCACT+CGG | - | chr1_4:25417875-25417894 | None:intergenic | 55.0% | |
| TGCCCTGTTCTTCAGTCTCG+AGG | + | chr1_4:25419614-25419633 | Msa0157600:intron | 55.0% | |
| GCGGCTGATGGAGAAGAATG+AGG | + | chr1_4:25420106-25420125 | Msa0157600:intron | 55.0% | |
| CTCCTACTCTGCGAGAAGGA+AGG | + | chr1_4:25420290-25420309 | Msa0157600:intron | 55.0% | |
| CACCTTCCTTCTCGCAGAGT+AGG | - | chr1_4:25420295-25420314 | None:intergenic | 55.0% | |
| GGTGTCCCACATTTCCTTGG+CGG | + | chr1_4:25420834-25420853 | Msa0157600:intron | 55.0% | |
| CTCCGCCACTGTTCAACAAG+TGG | - | chr1_4:25421203-25421222 | None:intergenic | 55.0% | |
| GAGGAATGTGAAGGGTAGGG+TGG | + | chr1_4:25421993-25422012 | Msa0157600:intron | 55.0% | |
| AGGACCATATGGGCCAAGGT+GGG | - | chr1_4:25422109-25422128 | None:intergenic | 55.0% | |
| TTGTTCAACAACAGCGGCGG+AGG | - | chr1_4:25422129-25422148 | None:intergenic | 55.0% | |
| !! | TGTCCCGCATCGACTAGGAA+TGG | + | chr1_4:25422419-25422438 | Msa0157600:intron | 55.0% |
| TTGACCTTGGGGTCTTGGCT+CGG | + | chr1_4:25422598-25422617 | Msa0157600:intron | 55.0% | |
| TCCAAGGAAGATGGGGCAGT+CGG | - | chr1_4:25414629-25414648 | None:intergenic | 55.0% | |
| AAGATGGGGCAGTCGGTGAG+TGG | - | chr1_4:25414622-25414641 | None:intergenic | 60.0% | |
| ACCGACTGCCCCATCTTCCT+TGG | + | chr1_4:25414625-25414644 | Msa0157600:CDS | 60.0% | |
| CGTCCTGCATGACAGGGAAC+TGG | + | chr1_4:25417050-25417069 | Msa0157600:intron | 60.0% | |
| CTCCAACATAAGCCGCGGAC+GGG | + | chr1_4:25417240-25417259 | Msa0157600:intron | 60.0% | |
| CTTCAGCACGACACATCGGC+AGG | - | chr1_4:25417619-25417638 | None:intergenic | 60.0% | |
| GGGCCGAGTGCGATAGAACT+CGG | + | chr1_4:25417869-25417888 | Msa0157600:intron | 60.0% | |
| AAGGGTAGGGTGGGCCAGTT+AGG | + | chr1_4:25422003-25422022 | Msa0157600:intron | 60.0% | |
| ATATGGGCCAAGGTGGGCCA+CGG | - | chr1_4:25422103-25422122 | None:intergenic | 60.0% | |
| GAGGACCATATGGGCCAAGG+TGG | - | chr1_4:25422110-25422129 | None:intergenic | 60.0% | |
| ACAGCGGCGGAGGACCATAT+GGG | - | chr1_4:25422119-25422138 | None:intergenic | 60.0% | |
| AACAGCGGCGGAGGACCATA+TGG | - | chr1_4:25422120-25422139 | None:intergenic | 60.0% | |
| CGGCAATGGGTCAAAGGTCC+AGG | - | chr1_4:25422535-25422554 | None:intergenic | 60.0% | |
| TTTGACCCATTGCCGCTCCC+CGG | + | chr1_4:25422540-25422559 | Msa0157600:intron | 60.0% | |
| TAGACCGAGCCAAGACCCCA+AGG | - | chr1_4:25422605-25422624 | None:intergenic | 60.0% | |
| AGCAGCAAAGAGAACGCGCG+AGG | - | chr1_4:25422818-25422837 | None:intergenic | 60.0% | |
| ACCGACTGCCCCATCTTCCT+TGG | + | chr1_4:25414625-25414644 | Msa0157600:CDS | 60.0% | |
| GTGGCCCACCTTGGCCCATA+TGG | + | chr1_4:25422102-25422121 | Msa0157600:intron | 65.0% | |
| GCGGAGGACCATATGGGCCA+AGG | - | chr1_4:25422113-25422132 | None:intergenic | 65.0% | |
| GGGGAGCGGCAATGGGTCAA+AGG | - | chr1_4:25422541-25422560 | None:intergenic | 65.0% | |
| TTGTTGGGGAGTCCGGGGAG+CGG | - | chr1_4:25422555-25422574 | None:intergenic | 65.0% | |
| GGCCCGTCCGCGGCTTATGT+TGG | - | chr1_4:25417245-25417264 | None:intergenic | 70.0% | |
| GGAGACAATGGGCCCGTCCG+CGG | - | chr1_4:25417255-25417274 | None:intergenic | 70.0% | |
| GGAGTCCGGGGAGCGGCAAT+GGG | - | chr1_4:25422548-25422567 | None:intergenic | 70.0% | |
| GGGAGTCCGGGGAGCGGCAA+TGG | - | chr1_4:25422549-25422568 | None:intergenic | 75.0% | |
| ! | GGGTGGGCCGTGGCCCACCT+TGG | + | chr1_4:25422093-25422112 | Msa0157600:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 25413972 | 25423970 | 25413972 | ID=Msa0157600;Name=Msa0157600 |
| chr1_4 | mRNA | 25413972 | 25423970 | 25413972 | ID=Msa0157600-mRNA-1;Parent=Msa0157600;Name=Msa0157600-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|0.83|0|0|6|0|660 |
| chr1_4 | exon | 25413972 | 25414131 | 25413972 | ID=Msa0157600-mRNA-1:exon:8588;Parent=Msa0157600-mRNA-1 |
| chr1_4 | exon | 25414282 | 25414529 | 25414282 | ID=Msa0157600-mRNA-1:exon:8589;Parent=Msa0157600-mRNA-1 |
| chr1_4 | exon | 25414542 | 25414789 | 25414542 | ID=Msa0157600-mRNA-1:exon:8590;Parent=Msa0157600-mRNA-1 |
| chr1_4 | exon | 25414832 | 25415063 | 25414832 | ID=Msa0157600-mRNA-1:exon:8591;Parent=Msa0157600-mRNA-1 |
| chr1_4 | exon | 25417252 | 25417499 | 25417252 | ID=Msa0157600-mRNA-1:exon:8592;Parent=Msa0157600-mRNA-1 |
| chr1_4 | exon | 25423124 | 25423970 | 25423124 | ID=Msa0157600-mRNA-1:exon:8593;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25413972 | 25414131 | 25413972 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25414282 | 25414529 | 25414282 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25414542 | 25414789 | 25414542 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25414832 | 25415063 | 25414832 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25417252 | 25417499 | 25417252 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| chr1_4 | CDS | 25423124 | 25423970 | 25423124 | ID=Msa0157600-mRNA-1:cds;Parent=Msa0157600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
