AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0159130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159130 MtrunA17_Chr1g0171451 92.263 685 11 2 1 652 1 676 0.0 1288
Msa0159130 MtrunA17_Chr1g0179331 50.501 699 251 9 32 648 128 813 0.0 638
Msa0159130 MtrunA17_Chr5g0427651 39.492 709 308 13 35 648 222 904 1.21e-152 464
Msa0159130 MtrunA17_Chr3g0132791 48.797 291 107 2 391 648 630 911 1.56e-84 285
Msa0159130 MtrunA17_Chr3g0132791 40.065 307 160 6 19 320 179 466 1.68e-56 206
Msa0159130 MtrunA17_Chr8g0392871 45.223 314 121 6 370 647 696 994 2.28e-79 272
Msa0159130 MtrunA17_Chr8g0392871 32.028 281 165 6 40 309 102 367 6.45e-32 132
Msa0159130 MtrunA17_Chr1g0191171 48.239 284 100 4 401 648 676 948 3.19e-79 271
Msa0159130 MtrunA17_Chr1g0191171 35.088 285 148 8 41 307 88 353 1.86e-36 146
Msa0159130 MtrunA17_Chr6g0482711 46.831 284 104 4 406 653 652 924 4.41e-77 265
Msa0159130 MtrunA17_Chr6g0482711 33.096 281 162 6 40 309 101 366 2.80e-32 133
Msa0159130 MtrunA17_Chr1g0151541 47.222 288 105 4 398 649 647 923 2.49e-75 259
Msa0159130 MtrunA17_Chr1g0151541 33.463 257 155 3 42 289 82 331 1.45e-34 140
Msa0159130 MtrunA17_Chr2g0294351 45.745 282 109 3 399 647 451 721 4.13e-69 239
Msa0159130 MtrunA17_Chr4g0068411 44.928 276 106 4 397 637 441 705 5.79e-65 228
Msa0159130 MtrunA17_Chr5g0397931 39.636 275 122 3 408 649 417 680 8.93e-58 207
Msa0159130 MtrunA17_Chr4g0041201 38.628 277 126 4 402 647 535 798 1.13e-53 197
Msa0159130 MtrunA17_Chr2g0325851 37.956 274 126 4 402 644 545 805 6.89e-53 195
Msa0159130 MtrunA17_Chr5g0406251 35.316 269 135 6 408 647 289 547 3.68e-45 169
Msa0159130 MtrunA17_Chr3g0143531 32.830 265 139 4 412 647 23 277 4.20e-41 151
Msa0159130 MtrunA17_Chr1g0211611 33.721 258 132 5 419 647 306 553 3.54e-38 149
Msa0159130 MtrunA17_Chr4g0065211 32.374 278 131 7 420 652 1127 1392 8.19e-34 139
Msa0159130 MtrunA17_Chr2g0305141 32.000 275 130 7 420 649 1089 1351 1.27e-33 138
Msa0159130 MtrunA17_Chr1g0202101 32.453 265 137 7 406 640 275 527 1.85e-33 135
Msa0159130 MtrunA17_Chr4g0075541 29.553 291 161 5 389 646 64 343 3.62e-33 131
Msa0159130 MtrunA17_Chr3g0090261 31.148 305 184 6 367 645 33 337 4.46e-33 130
Msa0159130 MtrunA17_Chr4g0059121 30.466 279 148 6 403 646 47 314 1.47e-32 129
Msa0159130 MtrunA17_Chr1g0196631 31.769 277 128 10 420 649 906 1168 6.27e-32 132
Msa0159130 MtrunA17_Chr4g0047191 29.474 285 153 4 400 647 30 303 6.77e-32 127
Msa0159130 MtrunA17_Chr4g0047211 29.474 285 153 4 400 647 25 298 6.97e-32 127
Msa0159130 MtrunA17_Chr2g0310761 29.721 323 159 10 381 651 903 1209 7.34e-32 132
Msa0159130 MtrunA17_Chr2g0310781 31.560 282 133 9 416 651 848 1115 1.04e-31 132
Msa0159130 MtrunA17_Chr4g0072741 31.071 280 134 9 420 653 841 1107 1.15e-31 132
Msa0159130 MtrunA17_Chr2g0282321 31.481 270 157 4 405 647 152 420 2.23e-31 127
Msa0159130 MtrunA17_Chr3g0117731 30.466 279 144 7 404 645 47 312 4.06e-31 125
Msa0159130 MtrunA17_Chr6g0461841 31.752 274 128 8 420 647 973 1233 1.38e-30 128
Msa0159130 MtrunA17_Chr3g0117811 29.195 298 149 5 403 647 49 337 1.80e-30 123
Msa0159130 MtrunA17_Chr8g0357611 29.964 277 137 7 420 651 1376 1640 3.07e-30 127
Msa0159130 MtrunA17_Chr6g0450871 29.841 315 166 7 378 647 45 349 6.44e-29 119
Msa0159130 MtrunA17_Chr4g0059181 28.859 298 150 5 403 647 78 366 1.44e-28 118
Msa0159130 MtrunA17_Chr4g0042731 31.061 264 144 5 420 650 149 407 3.27e-28 117
Msa0159130 MtrunA17_Chr4g0047201 28.889 270 164 3 405 647 191 459 3.54e-28 119
Msa0159130 MtrunA17_Chr3g0136131 31.752 274 145 9 412 645 85 356 4.36e-26 110
Msa0159130 MtrunA17_Chr7g0244621 27.723 303 163 8 388 648 22 310 8.36e-26 109
Msa0159130 MtrunA17_Chr1g0205071 26.349 315 169 5 387 647 51 356 2.76e-25 108
Msa0159130 MtrunA17_Chr8g0380551 30.037 273 152 9 413 650 223 491 1.39e-24 107
Msa0159130 MtrunA17_Chr5g0443471 31.338 284 147 7 399 647 157 427 4.42e-24 105
Msa0159130 MtrunA17_Chr5g0394681 25.868 317 179 6 380 647 55 364 3.72e-23 102
Msa0159130 MtrunA17_Chr2g0284901 31.183 279 144 7 408 647 142 411 6.26e-23 102
Msa0159130 MtrunA17_Chr1g0157231 28.384 229 122 6 408 607 140 355 5.08e-22 98.6
Msa0159130 MtrunA17_Chr8g0388891 26.855 283 157 7 390 645 108 367 1.11e-19 91.7
Msa0159130 MtrunA17_Chr3g0105891 25.828 302 170 13 377 644 299 580 1.46e-17 86.7
Msa0159130 MtrunA17_Chr2g0299331 55.882 68 19 1 521 588 2 58 1.74e-17 77.0
Msa0159130 MtrunA17_Chr6g0449241 25.685 292 159 10 404 649 12 291 2.11e-17 84.3
Msa0159130 MtrunA17_Chr1g0202831 29.119 261 131 9 420 641 417 662 6.84e-17 85.1
Msa0159130 MtrunA17_Chr4g0019371 28.467 274 139 11 420 646 675 938 3.85e-16 82.8
Msa0159130 MtrunA17_Chr8g0386981 28.169 284 161 8 405 651 399 676 7.41e-16 81.6
Msa0159130 MtrunA17_Chr2g0317001 28.000 275 136 11 418 652 19 271 1.24e-15 80.9
Msa0159130 MtrunA17_Chr4g0044691 27.239 268 151 8 420 646 331 595 1.37e-15 80.5
Msa0159130 MtrunA17_Chr5g0448661 26.690 281 151 8 420 649 111 387 1.54e-15 79.3
Msa0159130 MtrunA17_Chr2g0289161 26.596 282 156 8 420 653 426 704 3.66e-15 79.3
Msa0159130 MtrunA17_Chr1g0171571 27.451 306 155 9 407 653 24 321 4.11e-15 79.0
Msa0159130 MtrunA17_Chr5g0431191 24.031 258 158 9 418 646 337 585 5.07e-15 78.6
Msa0159130 MtrunA17_Chr8g0345801 27.941 204 118 5 413 590 14 214 1.12e-14 74.7
Msa0159130 MtrunA17_Chr4g0038501 23.622 254 168 6 412 641 18 269 3.89e-14 76.3
Msa0159130 MtrunA17_Chr2g0297961 30.198 202 92 9 420 584 80 269 4.98e-14 74.7
Msa0159130 MtrunA17_Chr2g0297911 26.259 278 141 12 420 645 81 346 5.94e-14 74.3
Msa0159130 MtrunA17_Chr8g0374031 27.320 194 114 5 417 585 340 531 1.41e-13 74.3
Msa0159130 MtrunA17_Chr4g0064201 26.619 278 147 10 420 644 117 390 2.07e-13 72.8
Msa0159130 MtrunA17_Chr7g0248904 28.934 197 111 4 420 589 368 562 2.53e-13 73.2
Msa0159130 MtrunA17_Chr5g0429431 30.918 207 95 8 420 589 135 330 2.85e-13 72.4
Msa0159130 MtrunA17_Chr5g0441021 26.621 293 136 12 420 647 76 354 3.31e-13 72.0
Msa0159130 MtrunA17_Chr4g0048951 29.044 272 148 9 420 652 124 389 3.48e-13 72.0
Msa0159130 MtrunA17_Chr1g0181291 26.538 260 155 8 420 653 518 767 6.89e-13 72.0
Msa0159130 MtrunA17_Chr1g0209391 30.233 215 106 9 405 585 291 495 8.46e-13 71.6
Msa0159130 MtrunA17_Chr5g0403051 27.723 202 104 7 417 585 333 525 8.48e-13 71.6
Msa0159130 MtrunA17_Chr7g0248881 28.934 197 111 5 420 589 361 555 1.21e-12 71.2
Msa0159130 MtrunA17_Chr1g0172951 25.899 278 148 8 420 648 349 617 1.27e-12 70.9
Msa0159130 MtrunA17_Chr1g0165941 43.860 57 32 0 570 626 12 68 1.31e-12 63.5
Msa0159130 MtrunA17_Chr7g0244521 25.591 254 149 8 420 642 18 262 1.36e-12 70.5
Msa0159130 MtrunA17_Chr1g0158091 26.415 212 105 6 416 588 74 273 1.42e-12 69.7
Msa0159130 MtrunA17_Chr7g0244931 27.985 268 152 9 420 647 676 942 1.68e-12 70.9
Msa0159130 MtrunA17_Chr1g0158131 27.053 207 100 6 416 583 206 400 2.41e-12 69.3
Msa0159130 MtrunA17_Chr2g0333181 25.430 291 160 9 410 645 24 312 3.74e-12 68.6
Msa0159130 MtrunA17_Chr3g0119241 25.658 304 155 11 400 647 308 596 4.05e-12 69.3
Msa0159130 MtrunA17_Chr4g0060531 27.046 281 149 11 420 647 88 365 4.12e-12 68.6
Msa0159130 MtrunA17_Chr5g0435211 26.102 295 136 13 420 647 81 360 5.31e-12 68.2
Msa0159130 MtrunA17_Chr2g0302431 24.603 252 159 7 416 640 22 269 5.79e-12 68.6
Msa0159130 MtrunA17_Chr8g0379931 27.599 279 134 14 420 645 716 979 6.04e-12 69.3
Msa0159130 MtrunA17_Chr8g0379091 24.603 252 155 9 420 642 32 277 6.79e-12 68.6
Msa0159130 MtrunA17_Chr4g0022431 28.417 278 152 10 417 648 555 831 8.64e-12 68.6
Msa0159130 MtrunA17_Chr3g0079051 25.500 200 106 4 420 585 461 651 1.05e-11 68.2
Msa0159130 MtrunA17_Chr5g0416311 25.795 283 154 9 420 649 82 361 1.29e-11 67.0
Msa0159130 MtrunA17_Chr1g0169841 26.296 270 152 8 420 644 819 1086 1.38e-11 68.2
Msa0159130 MtrunA17_Chr7g0276571 23.263 331 204 8 373 653 367 697 2.42e-11 67.0
Msa0159130 MtrunA17_Chr4g0025601 24.476 286 148 11 420 648 637 911 3.54e-11 66.6
Msa0159130 MtrunA17_Chr4g0001331 25.203 246 158 9 420 641 26 269 4.00e-11 65.9
Msa0159130 MtrunA17_Chr8g0358911 24.555 281 141 13 420 644 52 317 4.31e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0159130 AT5G03730.2 52.148 675 240 11 37 651 161 812 0.0 612
Msa0159130 AT5G03730.1 52.148 675 240 11 37 651 161 812 0.0 612
Msa0159130 AT4G24480.3 48.780 287 105 2 395 648 650 927 1.15e-85 288
Msa0159130 AT4G24480.3 41.176 306 158 4 10 310 217 505 5.71e-59 214
Msa0159130 AT4G24480.2 48.780 287 105 2 395 648 650 927 1.49e-85 288
Msa0159130 AT4G24480.2 41.176 306 158 4 10 310 217 505 7.15e-59 214
Msa0159130 AT4G24480.1 47.945 292 105 3 395 648 650 932 2.80e-83 282
Msa0159130 AT4G24480.1 41.176 306 158 4 10 310 217 505 6.91e-59 214
Msa0159130 AT1G08720.1 48.214 280 101 3 401 647 656 924 4.06e-79 270
Msa0159130 AT1G08720.1 33.882 304 169 8 41 330 76 361 1.50e-35 144
Msa0159130 AT1G18160.1 49.451 273 94 3 408 647 709 970 4.73e-78 268
Msa0159130 AT1G18160.1 33.094 278 166 5 28 297 99 364 1.05e-30 129
Msa0159130 AT1G73660.1 45.938 320 125 5 365 647 695 1003 7.20e-78 268
Msa0159130 AT1G73660.1 33.080 263 156 4 42 297 139 388 1.04e-29 126
Msa0159130 AT5G11850.1 48.352 273 97 3 408 647 603 864 1.12e-75 260
Msa0159130 AT5G11850.1 35.019 257 151 3 42 289 92 341 1.03e-36 147
Msa0159130 AT1G08720.2 49.237 262 89 3 401 629 656 906 3.85e-74 256
Msa0159130 AT1G08720.2 33.882 304 169 8 41 330 76 361 1.21e-35 144
Msa0159130 AT5G49470.1 45.263 285 110 4 398 647 186 459 3.35e-73 244
Msa0159130 AT5G49470.7 45.263 285 110 4 398 647 346 619 6.50e-72 245
Msa0159130 AT5G49470.4 45.263 285 110 4 398 647 447 720 4.45e-71 245
Msa0159130 AT5G49470.3 45.263 285 110 4 398 647 473 746 4.55e-71 245
Msa0159130 AT1G18160.2 49.020 255 86 3 408 629 709 952 2.55e-70 246
Msa0159130 AT1G18160.2 33.094 278 166 5 28 297 99 364 1.01e-30 129
Msa0159130 AT1G67890.1 44.211 285 112 5 398 647 469 741 5.48e-67 234
Msa0159130 AT3G06630.2 42.254 284 118 4 399 647 417 689 1.49e-65 229
Msa0159130 AT3G06620.1 42.456 285 118 4 398 647 476 749 1.90e-65 230
Msa0159130 AT4G23050.2 40.753 292 128 4 390 648 445 724 7.18e-64 225
Msa0159130 AT4G23050.1 40.753 292 128 4 390 648 444 723 7.22e-64 225
Msa0159130 AT3G06640.2 42.182 275 115 3 406 647 438 701 1.62e-63 224
Msa0159130 AT3G06640.3 42.182 275 115 3 406 647 438 701 1.62e-63 224
Msa0159130 AT3G06640.1 42.182 275 115 3 406 647 438 701 1.81e-63 224
Msa0159130 AT3G06630.1 43.939 264 102 4 399 627 417 669 6.84e-62 218
Msa0159130 AT1G67890.4 44.528 265 100 5 398 627 341 593 1.04e-61 216
Msa0159130 AT1G67890.3 44.528 265 100 5 398 627 469 721 8.07e-61 216
Msa0159130 AT1G67890.2 44.528 265 100 5 398 627 469 721 8.07e-61 216
Msa0159130 AT3G58640.1 39.416 274 122 4 402 644 541 801 6.00e-57 207
Msa0159130 AT3G58640.2 39.416 274 122 4 402 644 541 801 6.00e-57 207
Msa0159130 AT2G31010.1 38.686 274 124 4 402 644 507 767 6.96e-55 200
Msa0159130 AT2G31010.2 38.686 274 124 4 402 644 507 767 6.96e-55 200
Msa0159130 AT5G49470.5 44.068 236 86 4 398 598 473 697 4.17e-50 186
Msa0159130 AT5G49470.6 43.830 235 86 4 398 597 473 696 1.93e-49 184
Msa0159130 AT3G06630.6 42.553 235 89 4 399 598 333 556 1.95e-49 181
Msa0159130 AT3G06630.4 42.553 235 89 4 399 598 417 640 9.01e-49 181
Msa0159130 AT3G06630.3 42.553 235 89 4 399 598 417 640 9.01e-49 181
Msa0159130 AT3G06630.5 42.553 235 89 4 399 598 417 640 9.01e-49 181
Msa0159130 AT2G42640.1 36.162 271 128 5 405 645 519 774 1.20e-45 174
Msa0159130 AT2G42640.4 36.162 271 128 5 405 645 481 736 1.31e-45 173
Msa0159130 AT2G17700.1 31.071 280 150 4 405 653 277 544 3.26e-39 152
Msa0159130 AT4G35780.1 31.502 273 148 6 405 648 283 545 5.78e-39 152
Msa0159130 AT4G38470.1 33.457 269 140 6 408 647 284 542 6.62e-38 149
Msa0159130 AT5G49470.2 54.762 126 48 1 522 647 691 807 7.57e-38 150
Msa0159130 AT5G49470.2 48.077 104 52 1 398 499 470 573 6.76e-21 98.2
Msa0159130 AT4G38470.2 33.457 269 140 6 408 647 284 542 8.35e-38 148
Msa0159130 AT3G06630.7 40.580 207 77 4 399 570 417 612 3.13e-36 144
Msa0159130 AT5G57610.1 30.797 276 132 9 420 649 787 1049 2.64e-32 134
Msa0159130 AT2G35050.1 30.961 281 135 8 416 651 977 1243 5.30e-32 133
Msa0159130 AT2G35050.2 30.961 281 135 8 416 651 977 1243 5.30e-32 133
Msa0159130 AT1G04700.1 31.022 274 130 8 420 647 772 1032 8.67e-32 132
Msa0159130 AT1G04700.2 31.022 274 130 8 420 647 772 1032 8.67e-32 132
Msa0159130 AT1G16270.1 32.971 276 125 9 416 645 866 1127 1.47e-31 132
Msa0159130 AT1G16270.2 32.971 276 125 9 416 645 866 1127 1.47e-31 132
Msa0159130 AT1G16270.3 32.971 276 125 9 416 645 866 1127 1.47e-31 132
Msa0159130 AT1G79570.2 32.353 272 125 8 420 645 970 1228 2.65e-31 131
Msa0159130 AT1G79570.1 32.353 272 125 8 420 645 970 1228 2.65e-31 131
Msa0159130 AT1G62400.1 29.603 277 153 5 403 646 75 342 8.16e-31 125
Msa0159130 AT5G58950.1 30.741 270 159 4 405 647 198 466 9.21e-31 127
Msa0159130 AT4G31170.7 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.6 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.5 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.1 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.2 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.3 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT4G31170.8 29.492 295 163 7 390 652 116 397 1.61e-30 124
Msa0159130 AT3G46920.2 32.482 274 126 9 420 647 878 1138 7.96e-30 126
Msa0159130 AT3G46920.1 32.482 274 126 9 420 647 812 1072 9.26e-30 126
Msa0159130 AT3G01490.1 30.068 296 161 5 397 647 91 385 2.47e-29 121
Msa0159130 AT1G14000.1 31.034 261 142 4 420 647 168 423 2.26e-28 119
Msa0159130 AT4G38470.3 33.624 229 111 7 408 607 284 500 8.09e-28 118
Msa0159130 AT2G24360.1 27.586 290 157 5 390 645 115 385 1.75e-27 115
Msa0159130 AT5G50000.1 28.912 294 145 6 408 647 76 359 1.89e-27 115
Msa0159130 AT3G24715.1 29.851 268 127 9 420 640 842 1095 4.46e-27 118
Msa0159130 AT3G24715.3 29.851 268 127 9 420 640 842 1095 4.46e-27 118
Msa0159130 AT3G24715.2 29.851 268 127 9 420 640 842 1095 4.46e-27 118
Msa0159130 AT4G18950.2 31.597 288 143 8 399 650 150 419 1.13e-26 114
Msa0159130 AT4G18950.1 31.597 288 143 8 399 650 150 419 2.54e-26 113
Msa0159130 AT4G14780.1 27.333 300 150 7 404 647 51 338 3.35e-25 108
Msa0159130 AT3G46930.1 29.787 282 148 9 402 647 156 423 5.74e-25 109
Msa0159130 AT3G46930.2 29.787 282 148 9 402 647 191 458 6.91e-25 109
Msa0159130 AT3G63260.1 25.826 333 171 8 374 647 50 365 1.96e-24 106
Msa0159130 AT3G22750.1 25.503 298 159 5 404 647 64 352 5.47e-24 104
Msa0159130 AT5G01850.1 28.374 289 154 9 401 647 5 282 1.41e-23 102
Msa0159130 AT3G58760.1 30.142 282 157 9 401 647 151 427 1.34e-22 102
Msa0159130 AT3G58760.3 30.142 282 157 9 401 647 214 490 2.41e-22 101
Msa0159130 AT3G58760.5 30.142 282 157 9 401 647 214 490 2.41e-22 101
Msa0159130 AT3G01490.2 30.279 251 129 5 397 602 91 340 2.35e-21 96.7
Msa0159130 AT3G50730.1 27.476 313 155 14 384 648 12 300 2.36e-19 90.9
Msa0159130 AT5G40540.1 27.331 311 152 15 391 647 3 293 7.23e-19 89.4
Msa0159130 AT5G01850.2 26.198 313 154 10 401 647 5 306 7.79e-19 89.0
Msa0159130 AT2G42640.3 40.206 97 58 0 405 501 519 615 7.87e-19 91.3
Msa0159130 AT3G58760.6 32.420 219 110 7 401 586 151 364 1.29e-17 85.5
Msa0159130 AT5G58520.1 26.984 252 150 8 427 649 357 603 1.39e-17 87.0
Msa0159130 AT3G58760.2 32.420 219 110 7 401 586 214 427 2.77e-17 85.1
Msa0159130 AT3G58760.4 32.420 219 110 7 401 586 214 427 2.77e-17 85.1
Msa0159130 AT3G27560.1 25.424 295 148 11 403 644 11 286 2.90e-17 84.3
Msa0159130 AT5G16900.4 27.124 306 161 7 396 648 364 660 7.33e-17 85.1
Msa0159130 AT5G16900.1 27.124 306 161 7 396 648 550 846 1.12e-16 84.7
Msa0159130 AT5G16900.3 27.124 306 161 7 396 648 550 846 1.12e-16 84.7
Msa0159130 AT1G53570.5 27.511 229 152 5 420 642 220 440 1.45e-16 84.0
Msa0159130 AT3G46340.1 26.168 321 170 10 384 648 550 859 2.17e-16 84.0
Msa0159130 AT3G50720.1 26.807 332 173 12 361 648 6 311 1.49e-15 79.3
Msa0159130 AT3G63260.2 25.000 260 124 7 402 602 73 320 1.73e-15 79.0
Msa0159130 AT1G69790.1 28.082 292 140 9 420 652 90 370 3.07e-15 78.6
Msa0159130 AT1G69790.2 28.082 292 140 9 420 652 79 359 4.27e-15 78.2
Msa0159130 AT3G21340.1 25.076 331 174 11 375 649 554 866 2.76e-14 77.0
Msa0159130 AT3G46330.1 26.897 290 140 11 416 649 568 841 4.23e-14 76.6
Msa0159130 AT3G46330.2 26.897 290 140 11 416 649 544 817 4.90e-14 76.3
Msa0159130 AT2G23450.2 29.064 203 100 6 417 585 351 543 6.24e-14 75.9
Msa0159130 AT2G23450.1 29.064 203 100 6 417 585 351 543 6.24e-14 75.9
Msa0159130 AT3G07980.1 23.622 254 168 6 412 641 18 269 8.71e-14 75.9
Msa0159130 AT3G07980.2 23.622 254 168 6 412 641 18 269 9.28e-14 75.5
Msa0159130 AT3G21630.1 23.569 297 173 8 400 650 308 596 1.35e-13 74.3
Msa0159130 AT5G38210.3 30.918 207 99 8 416 588 354 550 1.88e-13 74.3
Msa0159130 AT5G38210.2 31.884 207 97 9 416 588 372 568 1.99e-13 73.9
Msa0159130 AT5G01020.1 26.523 279 150 10 420 647 75 349 2.42e-13 72.8
Msa0159130 AT5G38210.1 31.884 207 97 9 416 588 360 556 2.97e-13 73.6
Msa0159130 AT3G06030.1 26.568 271 164 9 403 642 60 326 5.75e-13 72.4
Msa0159130 AT1G79620.1 28.723 282 139 12 420 650 644 914 6.22e-13 72.8
Msa0159130 AT1G79620.5 28.723 282 139 12 420 650 670 940 6.24e-13 72.8
Msa0159130 AT1G66880.3 30.769 208 90 9 420 588 352 544 6.34e-13 72.4
Msa0159130 AT2G25880.2 29.545 176 105 5 412 584 23 182 6.90e-13 69.7
Msa0159130 AT1G66880.2 30.769 208 90 9 420 588 594 786 7.72e-13 72.4
Msa0159130 AT2G07180.1 25.090 279 154 10 420 647 96 370 9.76e-13 71.2
Msa0159130 AT2G07180.2 25.090 279 154 10 420 647 96 370 9.76e-13 71.2
Msa0159130 AT1G66880.1 30.769 208 90 9 420 588 973 1165 1.02e-12 72.4
Msa0159130 AT5G35580.1 26.408 284 144 11 420 647 82 356 2.06e-12 70.5
Msa0159130 AT5G35580.2 26.408 284 144 11 420 647 94 368 2.53e-12 70.1
Msa0159130 AT5G40540.2 27.155 232 108 11 462 647 1 217 2.88e-12 68.2
Msa0159130 AT1G04700.3 40.000 90 46 2 420 501 772 861 3.33e-12 70.5
Msa0159130 AT5G38240.3 28.774 212 105 9 416 594 273 471 4.27e-12 69.7
Msa0159130 AT5G38240.2 28.774 212 105 9 416 594 319 517 4.76e-12 69.7
Msa0159130 AT5G38240.1 28.774 212 105 9 416 594 337 535 5.59e-12 69.3
Msa0159130 AT1G53730.1 24.088 274 167 7 406 638 408 681 5.99e-12 69.3
Msa0159130 AT5G01810.1 27.165 254 145 9 420 642 18 262 6.68e-12 68.6
Msa0159130 AT5G01810.2 27.165 254 145 9 420 642 18 262 6.68e-12 68.6
Msa0159130 AT3G61960.1 26.378 254 141 9 416 635 12 253 7.62e-12 68.9
Msa0159130 AT4G31170.9 28.643 199 101 6 390 560 116 301 7.78e-12 67.4
Msa0159130 AT4G31170.10 28.643 199 101 6 390 560 116 301 7.78e-12 67.4
Msa0159130 AT4G31170.4 28.643 199 101 6 390 560 116 301 7.78e-12 67.4
Msa0159130 AT3G61960.2 27.869 244 150 9 416 635 12 253 9.17e-12 68.6
Msa0159130 AT5G01810.3 27.165 254 145 9 420 642 18 262 1.07e-11 67.4
Msa0159130 AT5G07140.1 25.940 266 159 9 413 649 326 582 1.17e-11 68.2
Msa0159130 AT5G25110.1 24.906 265 173 8 403 643 32 294 1.40e-11 67.8
Msa0159130 AT2G02800.1 25.735 272 143 8 426 647 104 366 3.49e-11 66.2
Msa0159130 AT2G02800.2 25.735 272 143 8 426 647 104 366 3.49e-11 66.2
Msa0159130 AT1G53730.2 24.364 275 166 7 406 638 408 682 3.73e-11 67.0
Msa0159130 AT2G29000.1 25.941 239 126 6 420 619 571 797 3.80e-11 67.0
Msa0159130 AT4G08500.1 27.132 258 138 11 420 641 339 582 4.96e-11 66.2
Msa0159130 AT5G59650.1 26.316 266 134 9 438 653 604 857 6.23e-11 66.2
Msa0159130 AT5G59650.2 26.316 266 134 9 438 653 612 865 6.82e-11 66.2
Msa0159130 AT5G38280.1 27.751 209 90 7 420 584 337 528 1.00e-10 65.5

Find 176 sgRNAs with CRISPR-Local

Find 1037 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCAATCTAATCGCTTCT+TGG 0.197983 1_4:+29090877 Msa0159130:CDS
ATCTAATCGCTTCTTGGATT+TGG 0.203509 1_4:+29090883 Msa0159130:CDS
ATCTTTCCTGAGCAGGTAAA+TGG 0.253655 1_4:+29091530 Msa0159130:intron
GCTTCTTGTATAGTGCAATT+TGG 0.260572 1_4:+29092422 Msa0159130:CDS
CTTCTTCTTCTTTCAAGAGC+TGG 0.264659 1_4:+29090780 Msa0159130:CDS
AATGGCCCAATTGTATTTCT+TGG 0.265818 1_4:+29094436 Msa0159130:CDS
TCTGTTACTATTGATAATTT+TGG 0.267330 1_4:-29099410 None:intergenic
TATTAAGTCTTTCAAGTAAC+TGG 0.270249 1_4:+29091768 Msa0159130:CDS
CTACTTGCTCACCACCATTT+TGG 0.272481 1_4:-29090596 None:intergenic
TCTTCCGACGAGGAAAATTT+AGG 0.284706 1_4:+29091942 Msa0159130:CDS
AGTTCACCTTTGATGACTTC+TGG 0.298215 1_4:-29101331 None:intergenic
ACTTGGATTATAGTTTATTC+AGG 0.300464 1_4:+29103609 Msa0159130:three_prime_UTR
TCCAAACATTGTACTTCTAA+TGG 0.306270 1_4:+29099370 Msa0159130:CDS
ACTTCTGGTGCCATCCATTC+AGG 0.323918 1_4:-29101316 None:intergenic
CTGATCAGTTGCATCTTTGA+TGG 0.334565 1_4:-29091795 None:intergenic
ATGCATCCATCCCATGAATT+AGG 0.339314 1_4:-29091592 None:intergenic
ATATTATATATAACATTAAA+AGG 0.343219 1_4:-29104596 None:intergenic
TTAAGTTAAAAGAGGAAAGT+TGG 0.348451 1_4:+29090619 Msa0159130:five_prime_UTR
TATTACTGAACGCACCTATA+TGG 0.353723 1_4:-29096590 None:intergenic
CCCATTAGAAGTACAATGTT+TGG 0.354786 1_4:-29099371 None:intergenic
ACCTTGAGAGAACTGCTAAC+TGG 0.361775 1_4:+29091743 Msa0159130:CDS
AGACCAGCAGAGCTCAATTA+AGG 0.363030 1_4:-29103164 None:intergenic
ATATTATATACTATTTCATT+TGG 0.363249 1_4:+29104648 Msa0159130:three_prime_UTR
TTCTTCTTCTTTCAAGAGCT+GGG 0.365101 1_4:+29090781 Msa0159130:CDS
TAATGATCATATCTTGCTTC+GGG 0.365573 1_4:+29104680 Msa0159130:three_prime_UTR
GTATATTCAGCTGTTTCAAC+TGG 0.366760 1_4:-29094407 None:intergenic
TTGTTTGAGAGAGCTGAGAT+AGG 0.372354 1_4:+29090667 Msa0159130:five_prime_UTR
TAAGTTAAAAGAGGAAAGTT+GGG 0.377616 1_4:+29090620 Msa0159130:five_prime_UTR
TCGAATAATTCACTACTGAT+TGG 0.381267 1_4:-29096822 None:intergenic
TGGTGTAATCTTGTGGGAAC+TGG 0.393497 1_4:+29101384 Msa0159130:CDS
TGACCTTGAGGAGGAGGATC+TGG 0.396757 1_4:+29096855 Msa0159130:CDS
ACTGCCTCCATGGTTGTTGA+AGG 0.402660 1_4:-29101411 None:intergenic
CTGCCTTAATTGAGCTCTGC+TGG 0.403646 1_4:+29103161 Msa0159130:CDS
GGGAGTTAAGTTTGCGAAAG+AGG 0.408267 1_4:+29090640 Msa0159130:five_prime_UTR
GTTTCAACTGGCTTGAACCT+TGG 0.409838 1_4:-29094395 None:intergenic
CAGCTTTGGTGTAATCTTGT+GGG 0.410216 1_4:+29101378 Msa0159130:CDS
TTGCAAATCTTGTTTGTAGT+AGG 0.416842 1_4:+29091819 Msa0159130:CDS
CTTCAGCAAACTGAAATGTT+TGG 0.420528 1_4:+29096543 Msa0159130:CDS
ATAATGATCATATCTTGCTT+CGG 0.421005 1_4:+29104679 Msa0159130:three_prime_UTR
TGAGAAGCGTCGTTTAAGTA+TGG 0.425065 1_4:+29099594 Msa0159130:CDS
ATATTGAACAATATTATACT+TGG 0.427067 1_4:+29103592 Msa0159130:three_prime_UTR
CTGCAAACATTTCATAATGT+AGG 0.429013 1_4:-29103515 None:intergenic
CAGTGTATCATTCTTCCAAT+TGG 0.429190 1_4:+29092008 Msa0159130:CDS
GATTGTCCAAGAAATACAAT+TGG 0.430286 1_4:-29094442 None:intergenic
ATCAGGTTGGCATGTATCCC+CGG 0.432496 1_4:-29094321 None:intergenic
CTCAACATTGTCATTACAAC+GGG 0.432867 1_4:+29104746 Msa0159130:three_prime_UTR
TAGAAACTCTTCAAATCGTC+CGG 0.434507 1_4:-29099165 None:intergenic
CAGGAGGTACTGTTGATTGT+AGG 0.435187 1_4:+29096508 Msa0159130:intron
CCAAACATTGTACTTCTAAT+GGG 0.441035 1_4:+29099371 Msa0159130:CDS
TCAACTCAGGTATGTGACTT+TGG 0.447038 1_4:+29101138 Msa0159130:intron
AAACTCTAAATCAGCCTGAA+TGG 0.449450 1_4:+29101302 Msa0159130:intron
AAAACGGTGTGAAAGTGATT+GGG 0.450277 1_4:-29090951 None:intergenic
GCAGAATTCACTGAAGAATC+AGG 0.454417 1_4:-29094338 None:intergenic
CTTGTGTTTGATACCACGTC+AGG 0.455377 1_4:+29094476 Msa0159130:CDS
CTTTCATCTAAAACAGCTGC+TGG 0.457184 1_4:+29101189 Msa0159130:CDS
CCTTGAGAGAACTGCTAACT+GGG 0.458582 1_4:+29091744 Msa0159130:CDS
GAACTGTACTTCGTGCGGAC+TGG 0.460206 1_4:+29097060 Msa0159130:CDS
GAGGAGAAACAAGACCAAAA+TGG 0.460381 1_4:+29090582 Msa0159130:five_prime_UTR
GCTGGTGGGAACAACCATAT+AGG 0.461323 1_4:+29096576 Msa0159130:CDS
GACATTAGTGATTCAAATGA+TGG 0.464254 1_4:-29091659 None:intergenic
GAGAAAGAAGGCCGCCTCCT+TGG 0.466171 1_4:-29103493 None:intergenic
CATACCAACATTCTGCATAT+CGG 0.467556 1_4:-29091633 None:intergenic
GAGTATATGATTGATTTAGT+AGG 0.468429 1_4:+29094293 Msa0159130:CDS
CCAATGGGTAAGCTTCCAAT+TGG 0.470687 1_4:-29092023 None:intergenic
AGAAGAAGAAGGAGAAGGAG+AGG 0.474237 1_4:-29090915 None:intergenic
TTGAACCTTGGATGACATAA+TGG 0.476169 1_4:-29094383 None:intergenic
ACGACGCTTCTCACTGATTG+AGG 0.476805 1_4:-29099584 None:intergenic
ATTGTCCAAGAAATACAATT+GGG 0.479780 1_4:-29094441 None:intergenic
CTGATTGAGGAACCAACACC+TGG 0.483548 1_4:-29099571 None:intergenic
GCAAGTAGTTAAGTTAAAAG+AGG 0.484158 1_4:+29090611 Msa0159130:five_prime_UTR
AAATCTTGTTTGTAGTAGGA+TGG 0.484748 1_4:+29091823 Msa0159130:CDS
ACGATTTGAAGAGTTTCTAA+AGG 0.487569 1_4:+29099169 Msa0159130:CDS
TCAGCTTTGGTGTAATCTTG+TGG 0.488001 1_4:+29101377 Msa0159130:CDS
AAATGCGATGTATTCAGCTT+TGG 0.489589 1_4:+29101364 Msa0159130:CDS
GTATAGGTTGTTGCAGCTGT+TGG 0.498326 1_4:+29103088 Msa0159130:intron
ATTGATTTAGTAGGAAGGCC+CGG 0.503026 1_4:+29094302 Msa0159130:CDS
TATATATAACATTAAAAGGT+AGG 0.504897 1_4:-29104592 None:intergenic
GAAGGAGAAGGAGAGGAGGT+AGG 0.505965 1_4:-29090908 None:intergenic
TAGTGCAATTTGGTTCTGAC+AGG 0.508741 1_4:+29092432 Msa0159130:CDS
TGAAGTTGACCTTGAGGAGG+AGG 0.511456 1_4:+29096849 Msa0159130:CDS
AGGAAAATTTAGGTGCGCGC+TGG 0.512122 1_4:+29091952 Msa0159130:CDS
CGATGGACACAAAGGCCAAT+GGG 0.513571 1_4:-29092038 None:intergenic
ACTTATTCACACTTTAGCAT+TGG 0.516905 1_4:-29103548 None:intergenic
ATCATTTGAATCACTAATGT+CGG 0.518556 1_4:+29091661 Msa0159130:CDS
AGGAGGTACTGTTGATTGTA+GGG 0.520702 1_4:+29096509 Msa0159130:intron
CAAGTATTGTAGAAAGGACA+TGG 0.523570 1_4:+29092397 Msa0159130:CDS
AGAAGAAGGAGAAGGAGAGG+AGG 0.523827 1_4:-29090912 None:intergenic
GACACGTGTTCCTCGGTACC+AGG 0.525797 1_4:-29096784 None:intergenic
GAATCGGAAGAAGAAGAAGA+AGG 0.527179 1_4:-29090926 None:intergenic
CCAATTGGAAGCTTACCCAT+TGG 0.527954 1_4:+29092023 Msa0159130:CDS
CTTGGATGACATAATGGAGA+AGG 0.535070 1_4:-29094377 None:intergenic
TCTAAATCAGCCTGAATGGA+TGG 0.535865 1_4:+29101306 Msa0159130:intron
TATGAACTTCTGCAGATGCC+AGG 0.536200 1_4:+29099553 Msa0159130:CDS
ATTGAAAGACACGTGTTCCT+CGG 0.539278 1_4:-29096791 None:intergenic
GTTAGCAGTTCTCTCAAGGT+AGG 0.539935 1_4:-29091740 None:intergenic
TCAATTAAGGCAGCCACTTG+AGG 0.540560 1_4:-29103151 None:intergenic
CTTGTTTCTCCTCGTCACAA+TGG 0.540678 1_4:-29090572 None:intergenic
TATTTGCCTTTGTACGTGAA+AGG 0.542445 1_4:-29101161 None:intergenic
CTTTGGCCTTTCACGTACAA+AGG 0.546273 1_4:+29101155 Msa0159130:CDS
TTGAAGGAGAACATTGGGAC+AGG 0.546450 1_4:+29096901 Msa0159130:CDS
ATCTTGTTTGTAGTAGGATG+GGG 0.546717 1_4:+29091825 Msa0159130:CDS
CTTCTCCATTATGTCATCCA+AGG 0.548013 1_4:+29094378 Msa0159130:CDS
TTCATAATGTAGGAGAAAGA+AGG 0.549377 1_4:-29103505 None:intergenic
GAGGCAGTTAAATCCTTCAC+AGG 0.551140 1_4:+29101426 Msa0159130:CDS
TAGTAACAGAATATTTATCA+AGG 0.551882 1_4:+29099423 Msa0159130:CDS
ATGTTTGGTGCAAACTATGC+TGG 0.552708 1_4:+29096558 Msa0159130:CDS
AATCTTGTTTGTAGTAGGAT+GGG 0.552756 1_4:+29091824 Msa0159130:CDS
CTTCTGCAGATGCCAGGTGT+TGG 0.558172 1_4:+29099559 Msa0159130:CDS
ATATGGAAAATAACCTGTGA+AGG 0.561782 1_4:-29101439 None:intergenic
GGGATGCAAGTATTGTAGAA+AGG 0.563567 1_4:+29092391 Msa0159130:CDS
ACTTGAGGATTCACATGCCT+CGG 0.563742 1_4:-29103136 None:intergenic
TGTCCAGATCCTCCTCCTCA+AGG 0.564900 1_4:-29096858 None:intergenic
TTGATTTAGTAGGAAGGCCC+GGG 0.569889 1_4:+29094303 Msa0159130:CDS
CCCAGTTAGCAGTTCTCTCA+AGG 0.570444 1_4:-29091744 None:intergenic
GTACTTCGTGCGGACTGGCG+TGG 0.573485 1_4:+29097065 Msa0159130:CDS
GAAGATGAAGAAGACGAAGA+AGG 0.574808 1_4:+29090755 Msa0159130:CDS
CTGCCTCCATGGTTGTTGAA+GGG 0.577783 1_4:-29101410 None:intergenic
CCTACCGTGTCGAATCGCTA+AGG 0.577869 1_4:+29092370 Msa0159130:CDS
GAAGGATTTAACTGCCTCCA+TGG 0.578225 1_4:-29101421 None:intergenic
CTTTAAAGAGCAATGCTCGA+TGG 0.578607 1_4:-29092055 None:intergenic
TCGATGGACACAAAGGCCAA+TGG 0.578921 1_4:-29092039 None:intergenic
AAATTTAGGTGCGCGCTGGA+AGG 0.579154 1_4:+29091956 Msa0159130:CDS
CTACCGTGTCGAATCGCTAA+GGG 0.579256 1_4:+29092371 Msa0159130:CDS
GCTGAAGAGCTGAATTACTC+TGG 0.581284 1_4:+29104548 Msa0159130:three_prime_UTR
TGTTGCTGTGAAGATACTTA+AGG 0.582434 1_4:+29099127 Msa0159130:CDS
TCAGGTTGGCATGTATCCCC+GGG 0.585442 1_4:-29094320 None:intergenic
AGGAGGATCTGGACATTCCG+TGG 0.586232 1_4:+29096866 Msa0159130:CDS
TTAGCAGTTCTCTCAAGGTA+GGG 0.588360 1_4:-29091739 None:intergenic
ATTTGAAGAGTTTCTAAAGG+AGG 0.592131 1_4:+29099172 Msa0159130:CDS
TTTCTTACTGTAGGGAACCA+AGG 0.593666 1_4:+29103476 Msa0159130:intron
AAACGGTGTGAAAGTGATTG+GGG 0.595140 1_4:-29090950 None:intergenic
AGATAGGAAATGTACGGCGG+TGG 0.596519 1_4:+29090683 Msa0159130:exon
TCATTTAGGTCCTGGTACCG+AGG 0.597693 1_4:+29096774 Msa0159130:intron
TGTTGATTGTAGGGACAAAG+TGG 0.601250 1_4:+29096518 Msa0159130:CDS
AGTACCGATATGCAGAATGT+TGG 0.601833 1_4:+29091629 Msa0159130:CDS
TACTCTGACAAAGTTCTAGA+CGG 0.602908 1_4:+29091563 Msa0159130:CDS
ATGGGATGGATGCATATACA+TGG 0.604853 1_4:+29091600 Msa0159130:CDS
CATCCCTTAGCGATTCGACA+CGG 0.604936 1_4:-29092374 None:intergenic
GAGCTGAATTACTCTGGTGG+TGG 0.605543 1_4:+29104554 Msa0159130:three_prime_UTR
GTGAAGATACTTAAGGTGCA+AGG 0.610544 1_4:+29099134 Msa0159130:CDS
TGATAACTCGTCAGTTGTAG+TGG 0.611571 1_4:+29091694 Msa0159130:CDS
TCTCAACATTGTCATTACAA+CGG 0.613134 1_4:+29104745 Msa0159130:three_prime_UTR
TGGTGACCCTTCAACAACCA+TGG 0.618144 1_4:+29101404 Msa0159130:CDS
TTGGATGACATAATGGAGAA+GGG 0.619669 1_4:-29094376 None:intergenic
ATTTGGAACTGTACTTCGTG+CGG 0.623642 1_4:+29097055 Msa0159130:CDS
TTCAAAATAAGTTCACTCCA+CGG 0.626128 1_4:-29096883 None:intergenic
ATATGATTGATTTAGTAGGA+AGG 0.628312 1_4:+29094297 Msa0159130:CDS
GAGCTGAGATAGGAAATGTA+CGG 0.628659 1_4:+29090677 Msa0159130:exon
ACGGTGTGAAAGTGATTGGG+GGG 0.631902 1_4:-29090948 None:intergenic
AATTCACTGAAGAATCAGGT+TGG 0.635393 1_4:-29094334 None:intergenic
AGCTGAATATACAAAGACAA+TGG 0.652209 1_4:+29094418 Msa0159130:CDS
GAGGCATGTGAATCCTCAAG+TGG 0.653414 1_4:+29103138 Msa0159130:CDS
GCAATGCTCGATGGACACAA+AGG 0.654233 1_4:-29092046 None:intergenic
GAGTCATGAAGTTGACCTTG+AGG 0.654694 1_4:+29096843 Msa0159130:CDS
CAAGAAGCGATTAGATTGAG+CGG 0.658363 1_4:-29090876 None:intergenic
TCATGAAGTTGACCTTGAGG+AGG 0.660990 1_4:+29096846 Msa0159130:CDS
ATGGCACCAGAAGTCATCAA+AGG 0.661499 1_4:+29101325 Msa0159130:CDS
TTTGGTGCAAACTATGCTGG+TGG 0.667833 1_4:+29096561 Msa0159130:CDS
GAGAAACAAGACCAAAATGG+TGG 0.675670 1_4:+29090585 Msa0159130:five_prime_UTR
CCTTAGCGATTCGACACGGT+AGG 0.676647 1_4:-29092370 None:intergenic
GCAAAAGGCTAGAAATTCCG+AGG 0.678048 1_4:+29103119 Msa0159130:CDS
AACGGTGTGAAAGTGATTGG+GGG 0.678641 1_4:-29090949 None:intergenic
TTTAAGTATGGCATATGACG+TGG 0.682060 1_4:+29099606 Msa0159130:CDS
ACTGTAGGGAACCAAGGAGG+CGG 0.683282 1_4:+29103482 Msa0159130:intron
TGATTTAGTAGGAAGGCCCG+GGG 0.686428 1_4:+29094304 Msa0159130:CDS
GCAAAGGAAACAACCTGACG+TGG 0.686648 1_4:-29094489 None:intergenic
GAAGAGCTGAATTACTCTGG+TGG 0.693112 1_4:+29104551 Msa0159130:three_prime_UTR
AGTCAGAGACCATTGTGACG+AGG 0.702445 1_4:+29090563 None:intergenic
ACAACTGACGAGTTATCACA+CGG 0.704651 1_4:-29091689 None:intergenic
CTTACTGTAGGGAACCAAGG+AGG 0.707435 1_4:+29103479 Msa0159130:intron
AAGTATTGTAGAAAGGACAT+GGG 0.708862 1_4:+29092398 Msa0159130:CDS
TTGGTGCAAACTATGCTGGT+GGG 0.729855 1_4:+29096562 Msa0159130:CDS
CTGAGATAGGAAATGTACGG+CGG 0.744607 1_4:+29090680 Msa0159130:exon
CTTGAGAGAACTGCTAACTG+GGG 0.745856 1_4:+29091745 Msa0159130:CDS
TGACCCTTCAACAACCATGG+AGG 0.747642 1_4:+29101407 Msa0159130:CDS
TAGGGGAGGATCTTCCGACG+AGG 0.775756 1_4:+29091932 Msa0159130:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTATTTAAAAA+AGG - chr1_4:29094526-29094545 None:intergenic 0.0%
!!! TTTTTAAATAAAATAATTAT+CGG + chr1_4:29094526-29094545 Msa0159130:intron 0.0%
!!! TTTATTTTTATTATTTTTAA+TGG - chr1_4:29098713-29098732 None:intergenic 0.0%
!!! TCTTTTGTATTTATTATATT+TGG - chr1_4:29092961-29092980 None:intergenic 10.0%
!! TCTTATTAAAGATTATAATA+TGG - chr1_4:29094236-29094255 None:intergenic 10.0%
!! ATATTATAATCTTTAATAAG+AGG + chr1_4:29094235-29094254 Msa0159130:intron 10.0%
!! TATTATACTACTAAAAAAAA+AGG - chr1_4:29095448-29095467 None:intergenic 10.0%
!! TTGTTTAATTATTTATATAG+AGG + chr1_4:29095617-29095636 Msa0159130:intron 10.0%
!! TGTTTAATTATTTATATAGA+GGG + chr1_4:29095618-29095637 Msa0159130:intron 10.0%
!! ATTTATTAAAGAAACAAATT+AGG - chr1_4:29096683-29096702 None:intergenic 10.0%
!!! TTTTGGTTAAAAATAATTTT+AGG + chr1_4:29099477-29099496 Msa0159130:intron 10.0%
!!! ACTAAAATTGATAATTTTTA+TGG - chr1_4:29100075-29100094 None:intergenic 10.0%
!!! AAATTATCAATTTTAGTTAT+TGG + chr1_4:29100078-29100097 Msa0159130:intron 10.0%
!! TATAGGTAAAATATAAATAA+TGG + chr1_4:29101771-29101790 Msa0159130:intron 10.0%
!!! ATAAATTTTCTCTTTTTATA+CGG + chr1_4:29102874-29102893 Msa0159130:intron 10.0%
!! ATATTATATACTATTTCATT+TGG + chr1_4:29104648-29104667 Msa0159130:three_prime_UTR 10.0%
!!! AAACTTGTATTTTTTTAACT+AGG + chr1_4:29093021-29093040 Msa0159130:intron 15.0%
!! TTAAGAAAATAAGAAAGAAT+AGG + chr1_4:29093256-29093275 Msa0159130:intron 15.0%
!! TATTAAAGATTATAATATGG+AGG - chr1_4:29094233-29094252 None:intergenic 15.0%
!! TAAGAAAAAATTACAACTTT+AGG + chr1_4:29094839-29094858 Msa0159130:intron 15.0%
!!! ATAAACAAGTTTATTGATTT+TGG + chr1_4:29094993-29095012 Msa0159130:intron 15.0%
!!! TTTAAGATATATATGATGAT+AGG - chr1_4:29095538-29095557 None:intergenic 15.0%
!!! TGCTACAAATTTTTAATATA+TGG + chr1_4:29095763-29095782 Msa0159130:intron 15.0%
!! TGAACATATGTTTATAAATT+GGG - chr1_4:29095839-29095858 None:intergenic 15.0%
!! TAAATATCAAAAGTTTAACA+TGG + chr1_4:29096437-29096456 Msa0159130:intron 15.0%
!! ATCTTTCAGTATATAAAATA+TGG - chr1_4:29097236-29097255 None:intergenic 15.0%
!! TAATAATCAAATTTATCTTG+CGG + chr1_4:29098008-29098027 Msa0159130:intron 15.0%
!! AATTTCAAATTGTATCTAAA+GGG - chr1_4:29100033-29100052 None:intergenic 15.0%
!! TTGAATAGAAATAATAGAAT+AGG + chr1_4:29100255-29100274 Msa0159130:intron 15.0%
!! TGAATAGAAATAATAGAATA+GGG + chr1_4:29100256-29100275 Msa0159130:intron 15.0%
!! TTTACTTTCTATGAATATTT+GGG + chr1_4:29100797-29100816 Msa0159130:intron 15.0%
!!! TATTTTACATAAGAAAAAGT+TGG - chr1_4:29101266-29101285 None:intergenic 15.0%
!!! TTTTTTTTGACAATTGATTT+TGG + chr1_4:29101557-29101576 Msa0159130:intron 15.0%
!! TAAATTATTAAGGGTAATAT+AGG + chr1_4:29101754-29101773 Msa0159130:intron 15.0%
!! AGAAAATTTATTAAGATGAA+AGG - chr1_4:29102865-29102884 None:intergenic 15.0%
!! ATATTGAACAATATTATACT+TGG + chr1_4:29103592-29103611 Msa0159130:three_prime_UTR 15.0%
!!! TTACTTATTTTTGTTTAATG+TGG + chr1_4:29103670-29103689 Msa0159130:intron 15.0%
!! TAGAAAAATTATATATTGCT+TGG - chr1_4:29104349-29104368 None:intergenic 15.0%
!! TATATATAACATTAAAAGGT+AGG - chr1_4:29104595-29104614 None:intergenic 15.0%
!! TACATAACATAATCACTTAT+AGG - chr1_4:29091096-29091115 None:intergenic 20.0%
!! CTTATTGAGATACTATTATT+TGG - chr1_4:29091197-29091216 None:intergenic 20.0%
!!! TTGTACTTGTAAGAAATTTT+AGG - chr1_4:29091245-29091264 None:intergenic 20.0%
!! TTGAAAATTACTCATCAAAA+GGG - chr1_4:29091360-29091379 None:intergenic 20.0%
!! TTTGAAAATTACTCATCAAA+AGG - chr1_4:29091361-29091380 None:intergenic 20.0%
!!! ATATTCAATTAAAAGGTACA+TGG - chr1_4:29091425-29091444 None:intergenic 20.0%
!! CGACTAAATATTCAATTAAA+AGG - chr1_4:29091432-29091451 None:intergenic 20.0%
!! TTAATTGAATATTTAGTCGA+TGG + chr1_4:29091433-29091452 Msa0159130:intron 20.0%
!!! TTTTTTGAAAAAATGAAGAG+AGG - chr1_4:29091859-29091878 None:intergenic 20.0%
!!! AAGCTTTTATTCTTTTCAAT+AGG + chr1_4:29091913-29091932 Msa0159130:intron 20.0%
!!! AGCTTTTATTCTTTTCAATA+GGG + chr1_4:29091914-29091933 Msa0159130:intron 20.0%
!! ATATGAAACTAGAAGATAAA+TGG - chr1_4:29092202-29092221 None:intergenic 20.0%
!!! AACCAAATTGATGATTTTAT+TGG - chr1_4:29092741-29092760 None:intergenic 20.0%
!!! GGTTTTTAATGATTTGAAAT+AGG + chr1_4:29092825-29092844 Msa0159130:intron 20.0%
!! AAAAGATACTCTAATAATTG+TGG + chr1_4:29092975-29092994 Msa0159130:intron 20.0%
!! AAAGATACTCTAATAATTGT+GGG + chr1_4:29092976-29092995 Msa0159130:intron 20.0%
!! TATCATGTATAAATTGTGAA+GGG - chr1_4:29093307-29093326 None:intergenic 20.0%
!! TTATCATGTATAAATTGTGA+AGG - chr1_4:29093308-29093327 None:intergenic 20.0%
!!! TATTGATTGCCATTTTTAAA+TGG + chr1_4:29093602-29093621 Msa0159130:intron 20.0%
!!! ATTGATTGCCATTTTTAAAT+GGG + chr1_4:29093603-29093622 Msa0159130:intron 20.0%
!! TGTGTTTATGAATATTTATG+AGG + chr1_4:29093662-29093681 Msa0159130:intron 20.0%
!! GTGTTTATGAATATTTATGA+GGG + chr1_4:29093663-29093682 Msa0159130:intron 20.0%
!! TTTGCTTGTTTCAAATATTT+AGG + chr1_4:29093736-29093755 Msa0159130:intron 20.0%
!! AAAGTCAATATTTGAAAGTT+CGG - chr1_4:29094669-29094688 None:intergenic 20.0%
!!! AAAGTTTTCTTCTTTATTGA+AGG + chr1_4:29095185-29095204 Msa0159130:intron 20.0%
!! TAGAATATGAAAAATCATAG+AGG + chr1_4:29095687-29095706 Msa0159130:intron 20.0%
!! AACATATGTTTATAAATTGG+GGG - chr1_4:29095837-29095856 None:intergenic 20.0%
!! GAACATATGTTTATAAATTG+GGG - chr1_4:29095838-29095857 None:intergenic 20.0%
!! CTGAACATATGTTTATAAAT+TGG - chr1_4:29095840-29095859 None:intergenic 20.0%
!! CAATTTATAAACATATGTTC+AGG + chr1_4:29095838-29095857 Msa0159130:intron 20.0%
!!! AAATTTAGAGGTATATAACT+GGG - chr1_4:29096471-29096490 None:intergenic 20.0%
!! TTGTCTATTCTATCAATAAA+AGG + chr1_4:29096618-29096637 Msa0159130:intron 20.0%
!! AGTATATAAAATATGGAGAT+AGG - chr1_4:29097229-29097248 None:intergenic 20.0%
!!! GATGTATTTAGTTCATAATA+TGG + chr1_4:29097342-29097361 Msa0159130:intron 20.0%
!! CATACATATTTAACTCTAAA+GGG - chr1_4:29097585-29097604 None:intergenic 20.0%
!! TCATACATATTTAACTCTAA+AGG - chr1_4:29097586-29097605 None:intergenic 20.0%
!!! TTAACCAATTTTAGCATATA+TGG + chr1_4:29097610-29097629 Msa0159130:intron 20.0%
!! AATACTTTAACAGTAAATTG+TGG - chr1_4:29097665-29097684 None:intergenic 20.0%
!! AATAATCAAATTTATCTTGC+GGG + chr1_4:29098009-29098028 Msa0159130:intron 20.0%
!! AAATCTATTCATAGATGAAT+GGG - chr1_4:29098045-29098064 None:intergenic 20.0%
!! AAAATCTATTCATAGATGAA+TGG - chr1_4:29098046-29098065 None:intergenic 20.0%
!! AGTATGTTAATTGTTATGTT+AGG - chr1_4:29098682-29098701 None:intergenic 20.0%
!!! TTTTTTTCTTTTTCAGATTG+AGG + chr1_4:29099235-29099254 Msa0159130:intron 20.0%
!!! TCTGTTACTATTGATAATTT+TGG - chr1_4:29099413-29099432 None:intergenic 20.0%
!! TAGTAACAGAATATTTATCA+AGG + chr1_4:29099423-29099442 Msa0159130:CDS 20.0%
!!! ATGTTTTATTCTTAACCAAA+TGG + chr1_4:29099504-29099523 Msa0159130:intron 20.0%
!! TGAAGAGAAATAATAGAATA+GGG - chr1_4:29099969-29099988 None:intergenic 20.0%
!! TTGAAGAGAAATAATAGAAT+AGG - chr1_4:29099970-29099989 None:intergenic 20.0%
!! CAATTTCAAATTGTATCTAA+AGG - chr1_4:29100034-29100053 None:intergenic 20.0%
!! GAAATTAAAAAAGCTCATTT+AGG - chr1_4:29100296-29100315 None:intergenic 20.0%
!! TTCTAATTAATCTCTTTATG+AGG - chr1_4:29100397-29100416 None:intergenic 20.0%
!! TAATTGAATTCATTGTAAAG+AGG + chr1_4:29100557-29100576 Msa0159130:intron 20.0%
!! AGAAAATCTGTCTTTATAAA+AGG + chr1_4:29100637-29100656 Msa0159130:intron 20.0%
!! GTTTACTTTCTATGAATATT+TGG + chr1_4:29100796-29100815 Msa0159130:intron 20.0%
!! TTAGGAAAGTCAAAATTAAT+AGG + chr1_4:29100967-29100986 Msa0159130:intron 20.0%
!! TAGGAAAGTCAAAATTAATA+GGG + chr1_4:29100968-29100987 Msa0159130:intron 20.0%
!! TTTGTTTATAATATCAACTC+AGG + chr1_4:29101125-29101144 Msa0159130:intron 20.0%
!! TATGTAAAATAACTCTTTGA+TGG + chr1_4:29101275-29101294 Msa0159130:intron 20.0%
!! TTTGAAAACGATAATTAAAC+AGG - chr1_4:29101651-29101670 None:intergenic 20.0%
!! AGATGATAACTAATACTATT+TGG + chr1_4:29102064-29102083 Msa0159130:intron 20.0%
!!! ATGCTACTTATATAATTGAA+GGG - chr1_4:29102746-29102765 None:intergenic 20.0%
!!! AATGCTACTTATATAATTGA+AGG - chr1_4:29102747-29102766 None:intergenic 20.0%
!! AAATATTACGAATAGAACAA+AGG - chr1_4:29102840-29102859 None:intergenic 20.0%
!! TAATTATAATGTGGTTCAAT+AGG + chr1_4:29103402-29103421 Msa0159130:intron 20.0%
!!! TTCAGAAATGTTTCTAAATT+TGG - chr1_4:29103709-29103728 None:intergenic 20.0%
!! AACTTAGCTTATTTATCAAT+GGG + chr1_4:29103804-29103823 Msa0159130:intron 20.0%
!! AATTTCGTGTAAAAATATAC+TGG + chr1_4:29104456-29104475 Msa0159130:intron 20.0%
!! AAATTGCATTTCAAAAAGAA+TGG - chr1_4:29104723-29104742 None:intergenic 20.0%
! TTAAGTTAAAAGAGGAAAGT+TGG + chr1_4:29090619-29090638 Msa0159130:five_prime_UTR 25.0%
! TAAGTTAAAAGAGGAAAGTT+GGG + chr1_4:29090620-29090639 Msa0159130:five_prime_UTR 25.0%
! AGAGAATAAATACCCAAAAA+CGG - chr1_4:29090970-29090989 None:intergenic 25.0%
! AAGTAATATCGAGAATGTTT+AGG - chr1_4:29091039-29091058 None:intergenic 25.0%
!! AACATTCTCGATATTACTTT+TGG + chr1_4:29091040-29091059 Msa0159130:intron 25.0%
! ACTATTATTTGGATAGCTTA+TGG - chr1_4:29091186-29091205 None:intergenic 25.0%
! ATCATTTGAATCACTAATGT+CGG + chr1_4:29091661-29091680 Msa0159130:CDS 25.0%
!! TATTAAGTCTTTCAAGTAAC+TGG + chr1_4:29091768-29091787 Msa0159130:CDS 25.0%
!! GCTTTTATTCTTTTCAATAG+GGG + chr1_4:29091915-29091934 Msa0159130:intron 25.0%
! TTGTCTTCATTTCTTAATGA+TGG + chr1_4:29092226-29092245 Msa0159130:intron 25.0%
! CCTGCAATTAAAATTATCAT+AGG - chr1_4:29092331-29092350 None:intergenic 25.0%
!!! CCTATGATAATTTTAATTGC+AGG + chr1_4:29092328-29092347 Msa0159130:intron 25.0%
! TTGACACATTCATATAAAAC+TGG + chr1_4:29092628-29092647 Msa0159130:intron 25.0%
!!! ATTGATGATTTTATTGGTGT+GGG - chr1_4:29092735-29092754 None:intergenic 25.0%
!!! AATTGATGATTTTATTGGTG+TGG - chr1_4:29092736-29092755 None:intergenic 25.0%
! CACCAATAAAATCATCAATT+TGG + chr1_4:29092736-29092755 Msa0159130:intron 25.0%
!! ATTTGAAATAGGCATATGTT+AGG + chr1_4:29092836-29092855 Msa0159130:intron 25.0%
!! TTTGAAATAGGCATATGTTA+GGG + chr1_4:29092837-29092856 Msa0159130:intron 25.0%
! CTTCAAATATATGTATGAAG+AGG + chr1_4:29092915-29092934 Msa0159130:intron 25.0%
! TATATGAAACGTTAGAGATA+TGG + chr1_4:29093125-29093144 Msa0159130:intron 25.0%
! CATAAGTAAAACAGAGTAAA+TGG + chr1_4:29093179-29093198 Msa0159130:intron 25.0%
! AAATGGAATAGAAGATTTCT+AGG + chr1_4:29093196-29093215 Msa0159130:intron 25.0%
! TTATATTCCATCCAATTACT+GGG - chr1_4:29093224-29093243 None:intergenic 25.0%
! TTTATATTCCATCCAATTAC+TGG - chr1_4:29093225-29093244 None:intergenic 25.0%
! ATCATGTATAAATTGTGAAG+GGG - chr1_4:29093306-29093325 None:intergenic 25.0%
! GCTAACTAGGAATATTAATT+AGG - chr1_4:29093332-29093351 None:intergenic 25.0%
!!! TTGATTGCCATTTTTAAATG+GGG + chr1_4:29093604-29093623 Msa0159130:intron 25.0%
! TTTCAAATATTTAGGAGAAC+TGG + chr1_4:29093744-29093763 Msa0159130:intron 25.0%
! TGAACAATTGAAAACATTGA+TGG - chr1_4:29093788-29093807 None:intergenic 25.0%
! AGTAAGAATGTGATAGTATT+AGG + chr1_4:29093879-29093898 Msa0159130:intron 25.0%
! GAATTTACAATGATGTACTT+TGG + chr1_4:29093901-29093920 Msa0159130:intron 25.0%
! TAAAAATCTCAACTGAGTTA+GGG + chr1_4:29093926-29093945 Msa0159130:intron 25.0%
!! AAATTAGAGAGTCATTGATT+GGG - chr1_4:29094067-29094086 None:intergenic 25.0%
!!! TGCTGTTTTATGTTTATTTG+TGG - chr1_4:29094160-29094179 None:intergenic 25.0%
! ATACAAATAACATACTGACA+TGG + chr1_4:29094192-29094211 Msa0159130:intron 25.0%
!! GAGTATATGATTGATTTAGT+AGG + chr1_4:29094293-29094312 Msa0159130:CDS 25.0%
!! ATATGATTGATTTAGTAGGA+AGG + chr1_4:29094297-29094316 Msa0159130:CDS 25.0%
! ATTGTCCAAGAAATACAATT+GGG - chr1_4:29094444-29094463 None:intergenic 25.0%
! CAGTATAAAGGCAAATAAAA+AGG - chr1_4:29094583-29094602 None:intergenic 25.0%
!!! GATAGTTGTTTTCAGTATAA+AGG - chr1_4:29094595-29094614 None:intergenic 25.0%
!! TGACTTTTGTAGTAAATCTT+TGG + chr1_4:29094682-29094701 Msa0159130:intron 25.0%
! AAACAAAGTAATGTAACATG+TGG - chr1_4:29094754-29094773 None:intergenic 25.0%
! ACATGTTACATTACTTTGTT+TGG + chr1_4:29094753-29094772 Msa0159130:intron 25.0%
! CAAAAAAAGCTCTTATGATT+AGG - chr1_4:29094809-29094828 None:intergenic 25.0%
!!! CTAATCATAAGAGCTTTTTT+TGG + chr1_4:29094807-29094826 Msa0159130:intron 25.0%
! TGTTGTCTTTGTAATATTAG+TGG + chr1_4:29094904-29094923 Msa0159130:intron 25.0%
! GTTGTCTTTGTAATATTAGT+GGG + chr1_4:29094905-29094924 Msa0159130:intron 25.0%
!!! TTTTGGTTTTTCTTAGTAAC+TGG + chr1_4:29095010-29095029 Msa0159130:intron 25.0%
!!! TTTGGTTTTTCTTAGTAACT+GGG + chr1_4:29095011-29095030 Msa0159130:intron 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_4:29095241-29095260 Msa0159130:intron 25.0%
!! TTTATCCCTCTTAGAATTTT+GGG + chr1_4:29095241-29095260 Msa0159130:intron 25.0%
!!! GGTTTTTAAAAACTTTGTGA+AGG - chr1_4:29095427-29095446 None:intergenic 25.0%
! GTGATCAAATTGTTAACTAT+TGG - chr1_4:29095473-29095492 None:intergenic 25.0%
! AGATGATATATGATAAGTGT+GGG - chr1_4:29095500-29095519 None:intergenic 25.0%
! AAGATGATATATGATAAGTG+TGG - chr1_4:29095501-29095520 None:intergenic 25.0%
! ATATATATGATGATAGGTGT+GGG - chr1_4:29095532-29095551 None:intergenic 25.0%
!! TGATACCATCTTAGAATTTT+GGG + chr1_4:29095988-29096007 Msa0159130:intron 25.0%
! TACGAACATATGTTTATAAG+TGG - chr1_4:29096056-29096075 None:intergenic 25.0%
!! AATTTAGAGGTATATAACTG+GGG - chr1_4:29096470-29096489 None:intergenic 25.0%
!! CAAATTTAGAGGTATATAAC+TGG - chr1_4:29096472-29096491 None:intergenic 25.0%
! ATGAAAATCAGCAAATTTAG+AGG - chr1_4:29096483-29096502 None:intergenic 25.0%
!!! TTATTTTGAAGGAGAACATT+GGG + chr1_4:29096896-29096915 Msa0159130:CDS 25.0%
! TACTCTATATATCTTGTACA+AGG - chr1_4:29096941-29096960 None:intergenic 25.0%
! ATGTTGATATCCTTATAATG+AGG - chr1_4:29097135-29097154 None:intergenic 25.0%
!! TCCTTTTATAAGAGACAAAT+GGG + chr1_4:29097307-29097326 Msa0159130:intron 25.0%
!! TCCTTTTTATAAGAGACAAT+GGG - chr1_4:29097392-29097411 None:intergenic 25.0%
! TCTGTATATTTACTTCTCAA+GGG - chr1_4:29097514-29097533 None:intergenic 25.0%
! ACATCCATATATGCTAAAAT+TGG - chr1_4:29097617-29097636 None:intergenic 25.0%
! ATTGCTTCATAGTTTCTAAT+AGG + chr1_4:29097725-29097744 Msa0159130:intron 25.0%
! TTGCTTCATAGTTTCTAATA+GGG + chr1_4:29097726-29097745 Msa0159130:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG + chr1_4:29097857-29097876 Msa0159130:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG + chr1_4:29097858-29097877 Msa0159130:intron 25.0%
!!! TGTAGATTTTAACATAAGAG+GGG + chr1_4:29097859-29097878 Msa0159130:intron 25.0%
! TTTAGTATACTTTGCATAAG+AGG + chr1_4:29097930-29097949 Msa0159130:intron 25.0%
! TTAGTATACTTTGCATAAGA+GGG + chr1_4:29097931-29097950 Msa0159130:intron 25.0%
!!! GTGTATATTTTAACCTATGA+GGG + chr1_4:29097961-29097980 Msa0159130:intron 25.0%
!!! TGTATATTTTAACCTATGAG+GGG + chr1_4:29097962-29097981 Msa0159130:intron 25.0%
! ATAATCAAATTTATCTTGCG+GGG + chr1_4:29098010-29098029 Msa0159130:intron 25.0%
! CAATTCCATTTATTAACTCT+AGG + chr1_4:29098782-29098801 Msa0159130:intron 25.0%
!!! CTCACTATTTTAAACAAAAG+AGG + chr1_4:29098851-29098870 Msa0159130:intron 25.0%
!! ATTTATTCTTTCTTCGCTTT+TGG - chr1_4:29098995-29099014 None:intergenic 25.0%
! AGGAATATTAATTGTCACAA+TGG - chr1_4:29099020-29099039 None:intergenic 25.0%
! CAGCATAAAAACATCTAAAA+AGG - chr1_4:29099040-29099059 None:intergenic 25.0%
! TATAATATAAAACCATTCCC+TGG - chr1_4:29099261-29099280 None:intergenic 25.0%
!!! GTTACTATTGATAATTTTGG+TGG - chr1_4:29099410-29099429 None:intergenic 25.0%
! TTCAAATCTCTATGAACAAT+GGG - chr1_4:29099776-29099795 None:intergenic 25.0%
! TATCTTTACGTGAGAATAAA+AGG + chr1_4:29099868-29099887 Msa0159130:intron 25.0%
! AGAATAAAAGGAATAGTTAC+TGG + chr1_4:29099880-29099899 Msa0159130:intron 25.0%
! GCCATTAGATCAAAAATAAA+CGG + chr1_4:29099902-29099921 Msa0159130:intron 25.0%
!!! ACCGTTTATTTTTGATCTAA+TGG - chr1_4:29099906-29099925 None:intergenic 25.0%
!! ATTTTTATGGATTCTCCAAT+CGG - chr1_4:29100062-29100081 None:intergenic 25.0%
!! AACTTTCAAGTCTGTTATTA+TGG + chr1_4:29100128-29100147 Msa0159130:intron 25.0%
!! ACTTTCAAGTCTGTTATTAT+GGG + chr1_4:29100129-29100148 Msa0159130:intron 25.0%
! AAGAAGATGAAAAGATCAAT+AGG + chr1_4:29100232-29100251 Msa0159130:intron 25.0%
!!! ACCATCTATTTTTGATCTAA+TGG + chr1_4:29100317-29100336 Msa0159130:intron 25.0%
! ACCATTAGATCAAAAATAGA+TGG - chr1_4:29100321-29100340 None:intergenic 25.0%
! TATCTTTATGTGAGAATGAA+AGG - chr1_4:29100355-29100374 None:intergenic 25.0%
! GATTAATTAGAATAGACTGA+CGG + chr1_4:29100405-29100424 Msa0159130:intron 25.0%
! TCAATAATGATGTGTCTAAT+TGG - chr1_4:29100455-29100474 None:intergenic 25.0%
! TGTCTTTATAAAAGGAAACA+AGG + chr1_4:29100645-29100664 Msa0159130:intron 25.0%
! GTCTTTATAAAAGGAAACAA+GGG + chr1_4:29100646-29100665 Msa0159130:intron 25.0%
! TCTTTATAAAAGGAAACAAG+GGG + chr1_4:29100647-29100666 Msa0159130:intron 25.0%
! ATTCATAGAAAGTAAACATC+AGG - chr1_4:29100793-29100812 None:intergenic 25.0%
! CACAAAATCTTAAAACTGTA+TGG - chr1_4:29100877-29100896 None:intergenic 25.0%
!!! CATACAGTTTTAAGATTTTG+TGG + chr1_4:29100875-29100894 Msa0159130:intron 25.0%
! GTACAAGGAATAATTATTCT+AGG - chr1_4:29101044-29101063 None:intergenic 25.0%
! ATATATGGATCTACAGATTA+TGG + chr1_4:29101087-29101106 Msa0159130:intron 25.0%
!! GTTTTTAAACTCACATTTGA+AGG + chr1_4:29101614-29101633 Msa0159130:intron 25.0%
! CTCAATGCAACATTAATTAT+TGG + chr1_4:29101672-29101691 Msa0159130:intron 25.0%
! TCTAACAATGTGTTTATATG+TGG + chr1_4:29101839-29101858 Msa0159130:intron 25.0%
! CTAACAATGTGTTTATATGT+GGG + chr1_4:29101840-29101859 Msa0159130:intron 25.0%
! TAACAATGTGTTTATATGTG+GGG + chr1_4:29101841-29101860 Msa0159130:intron 25.0%
!! ATTTGGAGCATGAATATAAA+TGG - chr1_4:29102000-29102019 None:intergenic 25.0%
! TATAATAGATGAATCCTAGT+AGG + chr1_4:29102161-29102180 Msa0159130:intron 25.0%
!!! AACTAGCTTTTTGTTTTTCA+TGG - chr1_4:29102265-29102284 None:intergenic 25.0%
!! TGCTACTTATATAATTGAAG+GGG - chr1_4:29102745-29102764 None:intergenic 25.0%
! AAAGCAAAAAGAAAAATCAG+TGG - chr1_4:29102773-29102792 None:intergenic 25.0%
!!! ATGTTTTGTAATTTCTGAAG+AGG + chr1_4:29102805-29102824 Msa0159130:intron 25.0%
!! TTTTCTCTTTTTATACGGAA+AGG + chr1_4:29102879-29102898 Msa0159130:intron 25.0%
! TCACCCAAATTAAAATTTGA+TGG + chr1_4:29102944-29102963 Msa0159130:intron 25.0%
!!! TGGCCATCAAATTTTAATTT+GGG - chr1_4:29102950-29102969 None:intergenic 25.0%
!!! TTGGCCATCAAATTTTAATT+TGG - chr1_4:29102951-29102970 None:intergenic 25.0%
!! AAATTAAAATTTGATGGCCA+AGG + chr1_4:29102950-29102969 Msa0159130:intron 25.0%
! TATTTGGATGTCAAATCAAA+AGG - chr1_4:29103062-29103081 None:intergenic 25.0%
! ATTTGACATCCAAATATCAT+TGG + chr1_4:29103066-29103085 Msa0159130:intron 25.0%
!!! AATAGATGAAGTTTTAAGCT+TGG + chr1_4:29103229-29103248 Msa0159130:intron 25.0%
! TGAACCACATTATAATTAGT+TGG - chr1_4:29103400-29103419 None:intergenic 25.0%
! CAATGTATTACAAAAAATGC+AGG - chr1_4:29103430-29103449 None:intergenic 25.0%
!! TTTTGTAATACATTGCCATA+TGG + chr1_4:29103435-29103454 Msa0159130:intron 25.0%
! AAACAATAGTTTCTTACTGT+AGG + chr1_4:29103467-29103486 Msa0159130:intron 25.0%
! AACAATAGTTTCTTACTGTA+GGG + chr1_4:29103468-29103487 Msa0159130:intron 25.0%
! ACTTGGATTATAGTTTATTC+AGG + chr1_4:29103609-29103628 Msa0159130:three_prime_UTR 25.0%
! TTGATAAATAAGCTAAGTTC+AGG - chr1_4:29103803-29103822 None:intergenic 25.0%
! GAACTTAGCTTATTTATCAA+TGG + chr1_4:29103803-29103822 Msa0159130:intron 25.0%
! ATTAGACCAATTAGACATTT+AGG + chr1_4:29103899-29103918 Msa0159130:intron 25.0%
! GAATTTCCTAAATGTCTAAT+TGG - chr1_4:29103908-29103927 None:intergenic 25.0%
! GGTTAGTAAAATCAATTAAG+TGG + chr1_4:29103974-29103993 Msa0159130:intron 25.0%
!!! GTCAATGATAATGTTTTTGA+TGG - chr1_4:29104150-29104169 None:intergenic 25.0%
! AATTATATATTGCTTGGCTT+AGG - chr1_4:29104343-29104362 None:intergenic 25.0%
!! ACACGAAATTTTATGCAAAA+CGG - chr1_4:29104446-29104465 None:intergenic 25.0%
! ATAATGATCATATCTTGCTT+CGG + chr1_4:29104679-29104698 Msa0159130:three_prime_UTR 25.0%
GCAAGTAGTTAAGTTAAAAG+AGG + chr1_4:29090611-29090630 Msa0159130:five_prime_UTR 30.0%
TCAAATAAGTCAATCCATAC+AGG + chr1_4:29091218-29091237 Msa0159130:intron 30.0%
!!! AAGAAATTTTAGGACCTGTA+TGG - chr1_4:29091235-29091254 None:intergenic 30.0%
AGTTGTTAAGTACAATACGA+CGG - chr1_4:29091313-29091332 None:intergenic 30.0%
CAAAGCTAATTTACACTATC+AGG - chr1_4:29091395-29091414 None:intergenic 30.0%
! CTGATAGTGTAAATTAGCTT+TGG + chr1_4:29091393-29091412 Msa0159130:intron 30.0%
! ACGGATTTTACCTAATTCAT+GGG + chr1_4:29091582-29091601 Msa0159130:CDS 30.0%
! ATTTTACCTAATTCATGGGA+TGG + chr1_4:29091586-29091605 Msa0159130:CDS 30.0%
GACATTAGTGATTCAAATGA+TGG - chr1_4:29091662-29091681 None:intergenic 30.0%
! TTGCAAATCTTGTTTGTAGT+AGG + chr1_4:29091819-29091838 Msa0159130:CDS 30.0%
! AAATCTTGTTTGTAGTAGGA+TGG + chr1_4:29091823-29091842 Msa0159130:CDS 30.0%
! AATCTTGTTTGTAGTAGGAT+GGG + chr1_4:29091824-29091843 Msa0159130:CDS 30.0%
! TTTATTCTTTTCAATAGGGG+AGG + chr1_4:29091918-29091937 Msa0159130:intron 30.0%
ATGGGTCAAAAATAACGAAT+CGG - chr1_4:29092094-29092113 None:intergenic 30.0%
!!! GTTATTTTTGACCCATTTTC+TGG + chr1_4:29092098-29092117 Msa0159130:intron 30.0%
AAATGTTCTGACCAGAAAAT+GGG - chr1_4:29092112-29092131 None:intergenic 30.0%
AAAATGTTCTGACCAGAAAA+TGG - chr1_4:29092113-29092132 None:intergenic 30.0%
!!! ATTTTAATTGCAGGTGTTAG+CGG + chr1_4:29092337-29092356 Msa0159130:intron 30.0%
! AAGTATTGTAGAAAGGACAT+GGG + chr1_4:29092398-29092417 Msa0159130:CDS 30.0%
ATAAAACTGGCCACATTATA+CGG + chr1_4:29092641-29092660 Msa0159130:intron 30.0%
! ACTCTGTTTTACTTATGCTT+AGG - chr1_4:29093176-29093195 None:intergenic 30.0%
CTATGAGTTAGTAACAATAC+AGG - chr1_4:29093365-29093384 None:intergenic 30.0%
ATCTTATCTCCTAACAAAGA+CGG + chr1_4:29093401-29093420 Msa0159130:intron 30.0%
TCTAATAAGAGAGAGATTGA+AGG + chr1_4:29093466-29093485 Msa0159130:intron 30.0%
CCAAAACTATTACAAGACTA+TGG - chr1_4:29093565-29093584 None:intergenic 30.0%
!!! CCATAGTCTTGTAATAGTTT+TGG + chr1_4:29093562-29093581 Msa0159130:intron 30.0%
!!! CTTGTAATAGTTTTGGCTAA+AGG + chr1_4:29093569-29093588 Msa0159130:intron 30.0%
!!! TGATTGCCATTTTTAAATGG+GGG + chr1_4:29093605-29093624 Msa0159130:intron 30.0%
GTAAAAATCTCAACTGAGTT+AGG + chr1_4:29093925-29093944 Msa0159130:intron 30.0%
AAAAATCTCAACTGAGTTAG+GGG + chr1_4:29093927-29093946 Msa0159130:intron 30.0%
GAAATTAGAGAGTCATTGAT+TGG - chr1_4:29094068-29094087 None:intergenic 30.0%
ATCAATGACTCTCTAATTTC+AGG + chr1_4:29094068-29094087 Msa0159130:intron 30.0%
AAGATTATAATATGGAGGAG+AGG - chr1_4:29094228-29094247 None:intergenic 30.0%
TAAATCAATCATATACTCCC+TGG - chr1_4:29094291-29094310 None:intergenic 30.0%
AGCTGAATATACAAAGACAA+TGG + chr1_4:29094418-29094437 Msa0159130:CDS 30.0%
GATTGTCCAAGAAATACAAT+TGG - chr1_4:29094445-29094464 None:intergenic 30.0%
!! TTTAAAAAAGGCATCCAGAA+GGG - chr1_4:29094514-29094533 None:intergenic 30.0%
!! ATTTAAAAAAGGCATCCAGA+AGG - chr1_4:29094515-29094534 None:intergenic 30.0%
ATCTATAACTATAAAAGCCC+AGG - chr1_4:29094646-29094665 None:intergenic 30.0%
CAAAGACAACATCTTAAATG+AGG - chr1_4:29094895-29094914 None:intergenic 30.0%
!! ATTTTCCATGAAGGTATGTT+TGG + chr1_4:29094946-29094965 Msa0159130:intron 30.0%
! TTTTTCCAAACATACCTTCA+TGG - chr1_4:29094954-29094973 None:intergenic 30.0%
TAACATTATAATACTACCGC+TGG - chr1_4:29095038-29095057 None:intergenic 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_4:29095240-29095259 Msa0159130:intron 30.0%
! GTTTATCCCTCTTAGAATTT+TGG + chr1_4:29095240-29095259 Msa0159130:intron 30.0%
GATATATATGATGATAGGTG+TGG - chr1_4:29095533-29095552 None:intergenic 30.0%
ATATGAATCAGATGCGAAAT+CGG + chr1_4:29095571-29095590 Msa0159130:intron 30.0%
! ATCATAGAGGACAATTTTGA+TGG + chr1_4:29095700-29095719 Msa0159130:intron 30.0%
!! TCATAGAGGACAATTTTGAT+GGG + chr1_4:29095701-29095720 Msa0159130:intron 30.0%
! ATCCAGGAATTTTGAATAGT+GGG - chr1_4:29095793-29095812 None:intergenic 30.0%
! CTGATACCATCTTAGAATTT+TGG + chr1_4:29095987-29096006 Msa0159130:intron 30.0%
!! TCAACAATTCCTTTTGTTGT+GGG + chr1_4:29096101-29096120 Msa0159130:intron 30.0%
AAATTTCCTAGTAGCTATTG+TGG + chr1_4:29096137-29096156 Msa0159130:intron 30.0%
TTACAACATAAAATGCCTGT+AGG - chr1_4:29096213-29096232 None:intergenic 30.0%
AACAATATCAATATCACGCA+AGG - chr1_4:29096351-29096370 None:intergenic 30.0%
TAGGCATATTAAGTATCAGA+AGG - chr1_4:29096664-29096683 None:intergenic 30.0%
! TTCTCTGTTTTCTGTCTTAA+TGG + chr1_4:29096721-29096740 Msa0159130:intron 30.0%
ATGAGATGGCATATCAAATT+AGG - chr1_4:29096758-29096777 None:intergenic 30.0%
TTTGATATGCCATCTCATTT+AGG + chr1_4:29096760-29096779 Msa0159130:intron 30.0%
TCGAATAATTCACTACTGAT+TGG - chr1_4:29096825-29096844 None:intergenic 30.0%
TTCAAAATAAGTTCACTCCA+CGG - chr1_4:29096886-29096905 None:intergenic 30.0%
!!! CTTATTTTGAAGGAGAACAT+TGG + chr1_4:29096895-29096914 Msa0159130:CDS 30.0%
!! AGCAACAATAACTGTTTTTC+AGG + chr1_4:29097029-29097048 Msa0159130:intron 30.0%
!! GCAACAATAACTGTTTTTCA+GGG + chr1_4:29097030-29097049 Msa0159130:intron 30.0%
TGAAAGATAAAACACGTCAT+AGG + chr1_4:29097248-29097267 Msa0159130:intron 30.0%
TCTCTTATAAAAGGACAAGA+GGG - chr1_4:29097302-29097321 None:intergenic 30.0%
! GTCCTTTTATAAGAGACAAA+TGG + chr1_4:29097306-29097325 Msa0159130:intron 30.0%
ACCCATTTGTCTCTTATAAA+AGG - chr1_4:29097311-29097330 None:intergenic 30.0%
ACCCATTGTCTCTTATAAAA+AGG + chr1_4:29097388-29097407 Msa0159130:intron 30.0%
! GTCCTTTTTATAAGAGACAA+TGG - chr1_4:29097393-29097412 None:intergenic 30.0%
ACTTTAACACAAGAGGATAT+GGG - chr1_4:29097479-29097498 None:intergenic 30.0%
CTCTGTATATTTACTTCTCA+AGG - chr1_4:29097515-29097534 None:intergenic 30.0%
AATTGACCAAGTGTTTATCA+AGG + chr1_4:29097828-29097847 Msa0159130:intron 30.0%
ATGTGATTCAATCATCTTTC+AGG + chr1_4:29097888-29097907 Msa0159130:intron 30.0%
TGTGATTCAATCATCTTTCA+GGG + chr1_4:29097889-29097908 Msa0159130:intron 30.0%
TAGTATACTTTGCATAAGAG+GGG + chr1_4:29097932-29097951 Msa0159130:intron 30.0%
!!! CGTGTATATTTTAACCTATG+AGG + chr1_4:29097960-29097979 Msa0159130:intron 30.0%
TAATCAAATTTATCTTGCGG+GGG + chr1_4:29098011-29098030 Msa0159130:intron 30.0%
GTTTGAATTCGTGTATACAA+TGG - chr1_4:29098069-29098088 None:intergenic 30.0%
AGTCTAAATATACCAAGCAA+TGG - chr1_4:29098102-29098121 None:intergenic 30.0%
AATATCCTAAGAAAGTTCAC+TGG + chr1_4:29098322-29098341 Msa0159130:intron 30.0%
ATGGAAAGAGGATAAAGTAA+GGG + chr1_4:29098399-29098418 Msa0159130:intron 30.0%
ACCATCTATATACCAAAAGA+AGG + chr1_4:29098427-29098446 Msa0159130:intron 30.0%
! ACCTTCTTTTGGTATATAGA+TGG - chr1_4:29098431-29098450 None:intergenic 30.0%
!! ATTGATAGTCTACCTTCTTT+TGG - chr1_4:29098442-29098461 None:intergenic 30.0%
CATCACTTCTCAACAAAATA+TGG - chr1_4:29098576-29098595 None:intergenic 30.0%
TTCCATTTATTAACTCTAGG+TGG + chr1_4:29098785-29098804 Msa0159130:intron 30.0%
ATCCACCTAGAGTTAATAAA+TGG - chr1_4:29098790-29098809 None:intergenic 30.0%
! CTTGAAGTTGTATCCTATTT+TGG - chr1_4:29098880-29098899 None:intergenic 30.0%
CAAAATAGGATACAACTTCA+AGG + chr1_4:29098878-29098897 Msa0159130:intron 30.0%
! GATACAACTTCAAGGTATTT+AGG + chr1_4:29098886-29098905 Msa0159130:intron 30.0%
GTAACACAGTATTTGGTTAT+CGG - chr1_4:29099098-29099117 None:intergenic 30.0%
ACGATTTGAAGAGTTTCTAA+AGG + chr1_4:29099169-29099188 Msa0159130:CDS 30.0%
! ATTTGAAGAGTTTCTAAAGG+AGG + chr1_4:29099172-29099191 Msa0159130:CDS 30.0%
AGTATCCCAGTTTATTTCAT+AGG + chr1_4:29099322-29099341 Msa0159130:intron 30.0%
TGTGACCTATGAAATAAACT+GGG - chr1_4:29099330-29099349 None:intergenic 30.0%
TCCAAACATTGTACTTCTAA+TGG + chr1_4:29099370-29099389 Msa0159130:CDS 30.0%
CCAAACATTGTACTTCTAAT+GGG + chr1_4:29099371-29099390 Msa0159130:CDS 30.0%
!! CTATTGATAATTTTGGTGGT+TGG - chr1_4:29099406-29099425 None:intergenic 30.0%
AAAAAAGTGATGATTGTGTC+AGG - chr1_4:29099460-29099479 None:intergenic 30.0%
!!! GACACAATCATCACTTTTTT+TGG + chr1_4:29099460-29099479 Msa0159130:intron 30.0%
CTTCAAATCTCTATGAACAA+TGG - chr1_4:29099777-29099796 None:intergenic 30.0%
!! TTTGAAGTCTCCAAATCTTT+TGG + chr1_4:29099790-29099809 Msa0159130:intron 30.0%
GAATCATCAACCAAAAGATT+TGG - chr1_4:29099803-29099822 None:intergenic 30.0%
TGATGATTCATACACTGTTA+AGG + chr1_4:29099814-29099833 Msa0159130:intron 30.0%
ATTGTATCTAAAGGGAAGAA+AGG - chr1_4:29100025-29100044 None:intergenic 30.0%
! TTTGAAATTGAATTGCCGAT+TGG + chr1_4:29100044-29100063 Msa0159130:intron 30.0%
! ATTTTCGTTATCAGAAAGAG+AGG + chr1_4:29100178-29100197 Msa0159130:intron 30.0%
TTATCAGAAAGAGAGGTAAA+TGG + chr1_4:29100185-29100204 Msa0159130:intron 30.0%
TATCAGAAAGAGAGGTAAAT+GGG + chr1_4:29100186-29100205 Msa0159130:intron 30.0%
! AGACACATCATTATTGATTG+TGG + chr1_4:29100458-29100477 Msa0159130:intron 30.0%
! GACACATCATTATTGATTGT+GGG + chr1_4:29100459-29100478 Msa0159130:intron 30.0%
!! TGATTGTGGGTGATTTTAAT+TGG + chr1_4:29100472-29100491 Msa0159130:intron 30.0%
GATCAACTAGAATATACTGA+TGG - chr1_4:29100522-29100541 None:intergenic 30.0%
! ATAAAGACAGATTTTCTTCC+AGG - chr1_4:29100634-29100653 None:intergenic 30.0%
! GTTATTGTATGTTTTCTAGG+TGG - chr1_4:29100771-29100790 None:intergenic 30.0%
! CAGGTTATTGTATGTTTTCT+AGG - chr1_4:29100774-29100793 None:intergenic 30.0%
ATCTTAAAACTGTATGGAAG+AGG - chr1_4:29100871-29100890 None:intergenic 30.0%
!!! GTTTTAAGATTTTGTGGAAC+AGG + chr1_4:29100881-29100900 Msa0159130:intron 30.0%
! TTCTAGGCAAAACCTTTTTA+AGG - chr1_4:29101028-29101047 None:intergenic 30.0%
ATATGGAAAATAACCTGTGA+AGG - chr1_4:29101442-29101461 None:intergenic 30.0%
! TTTTCCATATCATGATGCTT+TGG + chr1_4:29101452-29101471 Msa0159130:intron 30.0%
TGAGTTTAAAAACGAACAGA+GGG - chr1_4:29101607-29101626 None:intergenic 30.0%
TCTCAGTAATAAATAGCCAA+GGG - chr1_4:29101711-29101730 None:intergenic 30.0%
ATTACTGAGAGAGAAATAGA+TGG + chr1_4:29101721-29101740 Msa0159130:intron 30.0%
AACAATGTGTTTATATGTGG+GGG + chr1_4:29101842-29101861 Msa0159130:intron 30.0%
TGATACCATCTTAGAAATTG+TGG - chr1_4:29101914-29101933 None:intergenic 30.0%
TTTGGGTGAATCACAATATA+AGG - chr1_4:29102933-29102952 None:intergenic 30.0%
AGATAACTAACATACAACCT+TGG - chr1_4:29102970-29102989 None:intergenic 30.0%
!! ATGTCAAATCAAAAGGCATT+TGG - chr1_4:29103055-29103074 None:intergenic 30.0%
CATCCAAATATCATTGGTAT+AGG + chr1_4:29103072-29103091 Msa0159130:intron 30.0%
CAACCTATACCAATGATATT+TGG - chr1_4:29103078-29103097 None:intergenic 30.0%
TACAGACAACTCATTAACAA+TGG + chr1_4:29103317-29103336 Msa0159130:intron 30.0%
CATTATAATTAGTTGGCCAA+TGG - chr1_4:29103393-29103412 None:intergenic 30.0%
TTGGCCAACTAATTATAATG+TGG + chr1_4:29103393-29103412 Msa0159130:intron 30.0%
TTGTTTCAGATTCAACCATA+TGG - chr1_4:29103453-29103472 None:intergenic 30.0%
TTCATAATGTAGGAGAAAGA+AGG - chr1_4:29103508-29103527 None:intergenic 30.0%
CTGCAAACATTTCATAATGT+AGG - chr1_4:29103518-29103537 None:intergenic 30.0%
ACTTATTCACACTTTAGCAT+TGG - chr1_4:29103551-29103570 None:intergenic 30.0%
TGAGCTATTCATGATTTACT+TGG + chr1_4:29103758-29103777 Msa0159130:intron 30.0%
ATCAATGGGAAAATTGAGTA+TGG + chr1_4:29103818-29103837 Msa0159130:intron 30.0%
TCTAATATGTTTGACCCAAA+AGG - chr1_4:29103885-29103904 None:intergenic 30.0%
TTACTAACCAATTTCTTCCT+GGG - chr1_4:29103963-29103982 None:intergenic 30.0%
TTTACTAACCAATTTCTTCC+TGG - chr1_4:29103964-29103983 None:intergenic 30.0%
ATGGACCAATGTTGTTAAAT+GGG + chr1_4:29104006-29104025 Msa0159130:intron 30.0%
AAGAATCACTGAAAAACACA+AGG + chr1_4:29104215-29104234 Msa0159130:intron 30.0%
AGAATCACTGAAAAACACAA+GGG + chr1_4:29104216-29104235 Msa0159130:intron 30.0%
!!! ATTTTTAGCAAACTAGTTGC+AGG + chr1_4:29104269-29104288 Msa0159130:intron 30.0%
AGTACTTTAGTATAGCATCA+GGG - chr1_4:29104410-29104429 None:intergenic 30.0%
TAGTACTTTAGTATAGCATC+AGG - chr1_4:29104411-29104430 None:intergenic 30.0%
! ACGAAATTTTATGCAAAACG+GGG - chr1_4:29104444-29104463 None:intergenic 30.0%
! CACGAAATTTTATGCAAAAC+GGG - chr1_4:29104445-29104464 None:intergenic 30.0%
TACTGGTATACCTTAATTGA+TGG + chr1_4:29104473-29104492 Msa0159130:intron 30.0%
ACAAGCTTAACCATCAATTA+AGG - chr1_4:29104486-29104505 None:intergenic 30.0%
!! TATTGCTGATTGTTTCTGTT+TGG + chr1_4:29104512-29104531 Msa0159130:intron 30.0%
TAATGATCATATCTTGCTTC+GGG + chr1_4:29104680-29104699 Msa0159130:three_prime_UTR 30.0%
TCTCAACATTGTCATTACAA+CGG + chr1_4:29104745-29104764 Msa0159130:three_prime_UTR 30.0%
TTCTTCTTCTTTCAAGAGCT+GGG + chr1_4:29090781-29090800 Msa0159130:CDS 35.0%
ATCTAATCGCTTCTTGGATT+TGG + chr1_4:29090883-29090902 Msa0159130:CDS 35.0%
AAAACGGTGTGAAAGTGATT+GGG - chr1_4:29090954-29090973 None:intergenic 35.0%
AAAAACGGTGTGAAAGTGAT+TGG - chr1_4:29090955-29090974 None:intergenic 35.0%
! AATCACTTTCACACCGTTTT+TGG + chr1_4:29090954-29090973 Msa0159130:CDS 35.0%
!! ATCACTTTCACACCGTTTTT+GGG + chr1_4:29090955-29090974 Msa0159130:CDS 35.0%
GAGAATGTTTAGGCGATTAT+AGG - chr1_4:29091029-29091048 None:intergenic 35.0%
AATAAGCTGAAACCAGCTTA+TGG + chr1_4:29091142-29091161 Msa0159130:intron 35.0%
TTCATTAATCTTTCCTGACC+TGG + chr1_4:29091486-29091505 Msa0159130:intron 35.0%
TGAACACCTGATATAATTCC+AGG - chr1_4:29091507-29091526 None:intergenic 35.0%
TTCATTAATCTTTCCTGAGC+AGG + chr1_4:29091523-29091542 Msa0159130:intron 35.0%
!! TACTCTGACAAAGTTCTAGA+CGG + chr1_4:29091563-29091582 Msa0159130:CDS 35.0%
!! GACGGATTTTACCTAATTCA+TGG + chr1_4:29091581-29091600 Msa0159130:CDS 35.0%
CATACCAACATTCTGCATAT+CGG - chr1_4:29091636-29091655 None:intergenic 35.0%
! ATCTTGTTTGTAGTAGGATG+GGG + chr1_4:29091825-29091844 Msa0159130:CDS 35.0%
CAGTGTATCATTCTTCCAAT+TGG + chr1_4:29092008-29092027 Msa0159130:CDS 35.0%
!! TCTTAATGATGGATACACCT+TGG + chr1_4:29092237-29092256 Msa0159130:intron 35.0%
! CAAGTATTGTAGAAAGGACA+TGG + chr1_4:29092397-29092416 Msa0159130:CDS 35.0%
GCTTCTTGTATAGTGCAATT+TGG + chr1_4:29092422-29092441 Msa0159130:CDS 35.0%
ATTATTTGCGACTTTGTGTG+TGG + chr1_4:29092502-29092521 Msa0159130:intron 35.0%
TTATTTGCGACTTTGTGTGT+GGG + chr1_4:29092503-29092522 Msa0159130:intron 35.0%
CCATTAAACTCCGTATAATG+TGG - chr1_4:29092654-29092673 None:intergenic 35.0%
CCACATTATACGGAGTTTAA+TGG + chr1_4:29092651-29092670 Msa0159130:intron 35.0%
! TTATACGGAGTTTAATGGAC+TGG + chr1_4:29092656-29092675 Msa0159130:intron 35.0%
!! TAGGGTACCTAGAGATATTT+TGG + chr1_4:29092855-29092874 Msa0159130:intron 35.0%
!! AGGGTACCTAGAGATATTTT+GGG + chr1_4:29092856-29092875 Msa0159130:intron 35.0%
TTAGGCACCATATGTTTCAA+AGG - chr1_4:29093158-29093177 None:intergenic 35.0%
! ATTTCTAGGAACCCAGTAAT+TGG + chr1_4:29093210-29093229 Msa0159130:intron 35.0%
AGTAACAATACAGGCTAATG+AGG - chr1_4:29093356-29093375 None:intergenic 35.0%
AATAAGAGAGAGATTGAAGG+TGG + chr1_4:29093469-29093488 Msa0159130:intron 35.0%
AGGTGGAATTTCATCTTTAG+TGG + chr1_4:29093486-29093505 Msa0159130:intron 35.0%
GTATGTAGAAGACTTGTAGT+TGG + chr1_4:29093518-29093537 Msa0159130:intron 35.0%
TGCTATCCCCCATTTAAAAA+TGG - chr1_4:29093614-29093633 None:intergenic 35.0%
ATAGCACTTGTCTACAAGAT+AGG + chr1_4:29093628-29093647 Msa0159130:intron 35.0%
CATGTAATATGTCTGCAACA+TGG + chr1_4:29093820-29093839 Msa0159130:intron 35.0%
AATACATGTACACCTTTCCA+GGG + chr1_4:29094271-29094290 Msa0159130:intron 35.0%
AATTCACTGAAGAATCAGGT+TGG - chr1_4:29094337-29094356 None:intergenic 35.0%
! TTGGATGACATAATGGAGAA+GGG - chr1_4:29094379-29094398 None:intergenic 35.0%
TTGAACCTTGGATGACATAA+TGG - chr1_4:29094386-29094405 None:intergenic 35.0%
! GTATATTCAGCTGTTTCAAC+TGG - chr1_4:29094410-29094429 None:intergenic 35.0%
AATGGCCCAATTGTATTTCT+TGG + chr1_4:29094436-29094455 Msa0159130:CDS 35.0%
!! GCTGTGTTATTTACAACTTC+TGG + chr1_4:29094782-29094801 Msa0159130:intron 35.0%
! TGTCTCACAATTTTCCATGA+AGG + chr1_4:29094937-29094956 Msa0159130:intron 35.0%
! TGACTTGCATTAGTTGTACT+TGG + chr1_4:29095074-29095093 Msa0159130:intron 35.0%
GACTTGCATTAGTTGTACTT+GGG + chr1_4:29095075-29095094 Msa0159130:intron 35.0%
TCTTCTTTATTGAAGGCAGA+AGG + chr1_4:29095192-29095211 Msa0159130:intron 35.0%
! CTCAACCCAAAATTCTAAGA+GGG - chr1_4:29095249-29095268 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr1_4:29095270-29095289 Msa0159130:intron 35.0%
TCTAAGAGGGATAAACTAGA+GGG - chr1_4:29095316-29095335 None:intergenic 35.0%
! TTCTAAGAGGGATAAACTAG+AGG - chr1_4:29095317-29095336 None:intergenic 35.0%
CTAACTCAACCTTACAAAAC+CGG + chr1_4:29095270-29095289 Msa0159130:intron 35.0%
! TCCAGGAATTTTGAATAGTG+GGG - chr1_4:29095792-29095811 None:intergenic 35.0%
! GATCCAGGAATTTTGAATAG+TGG - chr1_4:29095794-29095813 None:intergenic 35.0%
AGGCATTAACTCATTCAATG+TGG + chr1_4:29095858-29095877 Msa0159130:intron 35.0%
GGCATTAACTCATTCAATGT+GGG + chr1_4:29095859-29095878 Msa0159130:intron 35.0%
! CACAACCCAAAATTCTAAGA+TGG - chr1_4:29095996-29096015 None:intergenic 35.0%
CCAATTTGAAAGGTTGAGTT+AGG - chr1_4:29096019-29096038 None:intergenic 35.0%
CCTAACTCAACCTTTCAAAT+TGG + chr1_4:29096016-29096035 Msa0159130:intron 35.0%
!! AACCTTTCAAATTGGCTTGT+TGG + chr1_4:29096024-29096043 Msa0159130:intron 35.0%
GTACCTTATCTCATCAAATG+CGG + chr1_4:29096073-29096092 Msa0159130:intron 35.0%
TACCTTATCTCATCAAATGC+GGG + chr1_4:29096074-29096093 Msa0159130:intron 35.0%
! CTCAACAATTCCTTTTGTTG+TGG + chr1_4:29096100-29096119 Msa0159130:intron 35.0%
AACAAAACACCCACAACAAA+AGG - chr1_4:29096113-29096132 None:intergenic 35.0%
CACAAAACAAACACAATGCA+AGG - chr1_4:29096186-29096205 None:intergenic 35.0%
!!! TTTGTTTTGTGCTTTCCTAC+AGG + chr1_4:29096195-29096214 Msa0159130:intron 35.0%
GGTATTACTATTCTGTTGCT+TGG + chr1_4:29096275-29096294 Msa0159130:intron 35.0%
!!! CGCAAGGTTTTAAACTGATA+TGG - chr1_4:29096335-29096354 None:intergenic 35.0%
CTTCAGCAAACTGAAATGTT+TGG + chr1_4:29096543-29096562 Msa0159130:CDS 35.0%
TATTACTGAACGCACCTATA+TGG - chr1_4:29096593-29096612 None:intergenic 35.0%
!!! GTGGAGTGAACTTATTTTGA+AGG + chr1_4:29096885-29096904 Msa0159130:CDS 35.0%
!!! AACTGTTTTTCAGGGTCATT+TGG + chr1_4:29097038-29097057 Msa0159130:intron 35.0%
ATTCGTCTGTCCTCATTATA+AGG + chr1_4:29097122-29097141 Msa0159130:intron 35.0%
AAGATAAAACACGTCATAGG+AGG + chr1_4:29097251-29097270 Msa0159130:intron 35.0%
AGATAAAACACGTCATAGGA+GGG + chr1_4:29097252-29097271 Msa0159130:intron 35.0%
!!! AGGGAGCATTTTATAAAGCT+GGG - chr1_4:29097283-29097302 None:intergenic 35.0%
GTCTCTTATAAAAGGACAAG+AGG - chr1_4:29097303-29097322 None:intergenic 35.0%
TCTCTTATAAAAAGGACCAG+AGG + chr1_4:29097396-29097415 Msa0159130:intron 35.0%
CTCTTATAAAAAGGACCAGA+GGG + chr1_4:29097397-29097416 Msa0159130:intron 35.0%
GTAATTCAAACCTCTCTCAT+GGG - chr1_4:29097453-29097472 None:intergenic 35.0%
TGTAATTCAAACCTCTCTCA+TGG - chr1_4:29097454-29097473 None:intergenic 35.0%
CACTTTAACACAAGAGGATA+TGG - chr1_4:29097480-29097499 None:intergenic 35.0%
AGTGTACACTTTAACACAAG+AGG - chr1_4:29097486-29097505 None:intergenic 35.0%
GTATATTTACTTCTCAAGGG+AGG - chr1_4:29097511-29097530 None:intergenic 35.0%
GTGATTCAATCATCTTTCAG+GGG + chr1_4:29097890-29097909 Msa0159130:intron 35.0%
!!! ATATTTTAACCTATGAGGGG+AGG + chr1_4:29097965-29097984 Msa0159130:intron 35.0%
!!! TATTTTAACCTATGAGGGGA+GGG + chr1_4:29097966-29097985 Msa0159130:intron 35.0%
AATATACCAAGCAATGGCAA+AGG - chr1_4:29098096-29098115 None:intergenic 35.0%
CAAGTAACAACACTTCAACT+TGG + chr1_4:29098126-29098145 Msa0159130:intron 35.0%
CTTCTCACTTCTCTGATAAA+TGG + chr1_4:29098150-29098169 Msa0159130:intron 35.0%
!!! GTTAACTGTTTTGATCTCCT+AGG - chr1_4:29098216-29098235 None:intergenic 35.0%
CATTGTTGTCTTTGGTATAG+AGG - chr1_4:29098277-29098296 None:intergenic 35.0%
! CTAGTTTGCATTGTTGTCTT+TGG - chr1_4:29098285-29098304 None:intergenic 35.0%
CAAAGACAACAATGCAAACT+AGG + chr1_4:29098283-29098302 Msa0159130:intron 35.0%
AGTATCCAACTAAGAGATCT+AGG + chr1_4:29098353-29098372 Msa0159130:intron 35.0%
GATGGAAAGAGGATAAAGTA+AGG + chr1_4:29098398-29098417 Msa0159130:intron 35.0%
GAAGCTGCAACAATTTGAAA+AGG + chr1_4:29098479-29098498 Msa0159130:intron 35.0%
! TGTTTGAAACAAAAGAGCCT+GGG + chr1_4:29098514-29098533 Msa0159130:intron 35.0%
CACTTCTCAACAAAATATGG+AGG - chr1_4:29098573-29098592 None:intergenic 35.0%
TGTTGAGAAGTGATGATACA+AGG + chr1_4:29098581-29098600 Msa0159130:intron 35.0%
ACAAAAGAGGTCTCCAAAAT+AGG + chr1_4:29098864-29098883 Msa0159130:intron 35.0%
! AACTTCAAGGTATTTAGGAG+AGG + chr1_4:29098891-29098910 Msa0159130:intron 35.0%
GCAAAGAAATGAAACGACTA+TGG + chr1_4:29098952-29098971 Msa0159130:intron 35.0%
TGTTGCTGTGAAGATACTTA+AGG + chr1_4:29099127-29099146 Msa0159130:CDS 35.0%
TAGAAACTCTTCAAATCGTC+CGG - chr1_4:29099168-29099187 None:intergenic 35.0%
GTGTGACCTATGAAATAAAC+TGG - chr1_4:29099331-29099350 None:intergenic 35.0%
! CCCATTAGAAGTACAATGTT+TGG - chr1_4:29099374-29099393 None:intergenic 35.0%
TTTAAGTATGGCATATGACG+TGG + chr1_4:29099606-29099625 Msa0159130:CDS 35.0%
GAGATGTGATATGTTTGTCT+AGG + chr1_4:29099715-29099734 Msa0159130:intron 35.0%
AAATCTCTATGAACAATGGG+AGG - chr1_4:29099773-29099792 None:intergenic 35.0%
! ATGTTTTCTAGGTGGAAAAC+TGG - chr1_4:29100763-29100782 None:intergenic 35.0%
! AACGCAAATGCTCATTTTGT+AGG - chr1_4:29100823-29100842 None:intergenic 35.0%
AAGAGGACTACTATTAGGAA+GGG - chr1_4:29100854-29100873 None:intergenic 35.0%
TATGGAAGAGGACTACTATT+AGG - chr1_4:29100859-29100878 None:intergenic 35.0%
TCAACGAGATAGAAAAGCTT+GGG - chr1_4:29100941-29100960 None:intergenic 35.0%
CTATCTCGTTGAGAAGATTT+AGG + chr1_4:29100949-29100968 Msa0159130:intron 35.0%
ATAGAGTGCACTCCTTAAAA+AGG + chr1_4:29101013-29101032 Msa0159130:intron 35.0%
TATATCCATAAACGCATGCA+AGG - chr1_4:29101072-29101091 None:intergenic 35.0%
TGCATGCGTTTATGGATATA+TGG + chr1_4:29101072-29101091 Msa0159130:intron 35.0%
TATTTGCCTTTGTACGTGAA+AGG - chr1_4:29101164-29101183 None:intergenic 35.0%
! AAACTAACGCTTTTCAGTTG+AGG - chr1_4:29101231-29101250 None:intergenic 35.0%
AAACTCTAAATCAGCCTGAA+TGG + chr1_4:29101302-29101321 Msa0159130:intron 35.0%
AAATGCGATGTATTCAGCTT+TGG + chr1_4:29101364-29101383 Msa0159130:CDS 35.0%
! CAATCCAAAGCATCATGATA+TGG - chr1_4:29101459-29101478 None:intergenic 35.0%
GAGGAACAATATCTTTCTCA+TGG - chr1_4:29101501-29101520 None:intergenic 35.0%
GTGAGTTTAAAAACGAACAG+AGG - chr1_4:29101608-29101627 None:intergenic 35.0%
! TGGTTTGTGAATAATACCCT+TGG + chr1_4:29101692-29101711 Msa0159130:intron 35.0%
CTCTCAGTAATAAATAGCCA+AGG - chr1_4:29101712-29101731 None:intergenic 35.0%
CCATCTTAGAAATTGTGGTT+GGG - chr1_4:29101909-29101928 None:intergenic 35.0%
ACCATCTTAGAAATTGTGGT+TGG - chr1_4:29101910-29101929 None:intergenic 35.0%
CTCCTCCAAAATTATTCGTT+GGG + chr1_4:29101938-29101957 Msa0159130:intron 35.0%
GGAGCATGAATATAAATGGT+GGG - chr1_4:29101996-29102015 None:intergenic 35.0%
TGGAGCATGAATATAAATGG+TGG - chr1_4:29101997-29102016 None:intergenic 35.0%
ATGTTAAAAGAGTCCCACAT+CGG + chr1_4:29102036-29102055 Msa0159130:intron 35.0%
TATCATCTCTTATCCGATGT+GGG - chr1_4:29102052-29102071 None:intergenic 35.0%
TTATCATCTCTTATCCGATG+TGG - chr1_4:29102053-29102072 None:intergenic 35.0%
! AAGGAGTGTATGATACTAAG+AGG + chr1_4:29102114-29102133 Msa0159130:intron 35.0%
! AGGAGTGTATGATACTAAGA+GGG + chr1_4:29102115-29102134 Msa0159130:intron 35.0%
! AAAAGCTAGTTTCATGTGTC+TGG + chr1_4:29102274-29102293 Msa0159130:intron 35.0%
CAATTCACGTAGAAAATCTC+AGG + chr1_4:29102349-29102368 Msa0159130:intron 35.0%
TGCATTACAGTAAGCATGAA+AGG + chr1_4:29102512-29102531 Msa0159130:intron 35.0%
TACGAATAGAACAAAGGAGA+AGG - chr1_4:29102834-29102853 None:intergenic 35.0%
TGTATGTTAGTTATCTCCTC+TGG + chr1_4:29102974-29102993 Msa0159130:intron 35.0%
AGTAATGATCTATGCACAGA+CGG - chr1_4:29103021-29103040 None:intergenic 35.0%
!!! AGATGAAGTTTTAAGCTTGG+TGG + chr1_4:29103232-29103251 Msa0159130:intron 35.0%
AATGGCATAACTCTGAATGT+AGG - chr1_4:29103270-29103289 None:intergenic 35.0%
TACATTCAGAGTTATGCCAT+TGG + chr1_4:29103269-29103288 Msa0159130:intron 35.0%
TGTCTGTATGTGTCTCTATA+AGG - chr1_4:29103305-29103324 None:intergenic 35.0%
ATAATTAGTTGGCCAATGGT+TGG - chr1_4:29103389-29103408 None:intergenic 35.0%
CATTTAGGAAATTCACCCAA+CGG + chr1_4:29103914-29103933 Msa0159130:intron 35.0%
TAGTTAACCCAGGAAGAAAT+TGG + chr1_4:29103953-29103972 Msa0159130:intron 35.0%
AATTAAGTGGTTCACCTTCA+TGG + chr1_4:29103987-29104006 Msa0159130:intron 35.0%
TTAACAACATTGGTCCATGA+AGG - chr1_4:29104004-29104023 None:intergenic 35.0%
CATGGACCAATGTTGTTAAA+TGG + chr1_4:29104005-29104024 Msa0159130:intron 35.0%
!! ATGTTTTTGATGGCAGATTG+CGG - chr1_4:29104140-29104159 None:intergenic 35.0%
TGCCAATAGTATTTCTTGCT+GGG + chr1_4:29104175-29104194 Msa0159130:intron 35.0%
! GGGATTTTCATTGTTAGTTG+AGG - chr1_4:29104390-29104409 None:intergenic 35.0%
! GAAATTTTATGCAAAACGGG+GGG - chr1_4:29104442-29104461 None:intergenic 35.0%
! CGAAATTTTATGCAAAACGG+GGG - chr1_4:29104443-29104462 None:intergenic 35.0%
CTCAACATTGTCATTACAAC+GGG + chr1_4:29104746-29104765 Msa0159130:three_prime_UTR 35.0%
GAGGAGAAACAAGACCAAAA+TGG + chr1_4:29090582-29090601 Msa0159130:five_prime_UTR 40.0%
GAGAAACAAGACCAAAATGG+TGG + chr1_4:29090585-29090604 Msa0159130:five_prime_UTR 40.0%
TTGTTTGAGAGAGCTGAGAT+AGG + chr1_4:29090667-29090686 Msa0159130:five_prime_UTR 40.0%
GAGCTGAGATAGGAAATGTA+CGG + chr1_4:29090677-29090696 Msa0159130:exon 40.0%
GAAGATGAAGAAGACGAAGA+AGG + chr1_4:29090755-29090774 Msa0159130:CDS 40.0%
CTTCTTCTTCTTTCAAGAGC+TGG + chr1_4:29090780-29090799 Msa0159130:CDS 40.0%
CAAGAAGCGATTAGATTGAG+CGG - chr1_4:29090879-29090898 None:intergenic 40.0%
GAAGAAGAAGAAGAAGGAGA+AGG - chr1_4:29090923-29090942 None:intergenic 40.0%
GAATCGGAAGAAGAAGAAGA+AGG - chr1_4:29090929-29090948 None:intergenic 40.0%
AAACGGTGTGAAAGTGATTG+GGG - chr1_4:29090953-29090972 None:intergenic 40.0%
AGCTAGATTGAAGAGTCTTC+AGG + chr1_4:29091118-29091137 Msa0159130:intron 40.0%
TTTATGATGCGTCCATAAGC+TGG - chr1_4:29091157-29091176 None:intergenic 40.0%
TCCTGACCTGGAATTATATC+AGG + chr1_4:29091498-29091517 Msa0159130:intron 40.0%
ACCTGATATAATTCCAGGTC+AGG - chr1_4:29091502-29091521 None:intergenic 40.0%
ATCTTTCCTGAGCAGGTAAA+TGG + chr1_4:29091530-29091549 Msa0159130:intron 40.0%
AAACAACCATTTACCTGCTC+AGG - chr1_4:29091539-29091558 None:intergenic 40.0%
ATGCATCCATCCCATGAATT+AGG - chr1_4:29091595-29091614 None:intergenic 40.0%
ATGGGATGGATGCATATACA+TGG + chr1_4:29091600-29091619 Msa0159130:CDS 40.0%
!! AGTACCGATATGCAGAATGT+TGG + chr1_4:29091629-29091648 Msa0159130:CDS 40.0%
ACAACTGACGAGTTATCACA+CGG - chr1_4:29091692-29091711 None:intergenic 40.0%
TGATAACTCGTCAGTTGTAG+TGG + chr1_4:29091694-29091713 Msa0159130:CDS 40.0%
TTAGCAGTTCTCTCAAGGTA+GGG - chr1_4:29091742-29091761 None:intergenic 40.0%
CTGATCAGTTGCATCTTTGA+TGG - chr1_4:29091798-29091817 None:intergenic 40.0%
TCTTCCGACGAGGAAAATTT+AGG + chr1_4:29091942-29091961 Msa0159130:CDS 40.0%
! CTTTAAAGAGCAATGCTCGA+TGG - chr1_4:29092058-29092077 None:intergenic 40.0%
ATTCACAGTTCGAAACTCCA+AGG - chr1_4:29092257-29092276 None:intergenic 40.0%
! GGGATGCAAGTATTGTAGAA+AGG + chr1_4:29092391-29092410 Msa0159130:CDS 40.0%
!! TAGTGCAATTTGGTTCTGAC+AGG + chr1_4:29092432-29092451 Msa0159130:CDS 40.0%
! GGGTACCTAGAGATATTTTG+GGG + chr1_4:29092857-29092876 Msa0159130:intron 40.0%
!! ACCTAGAGATATTTTGGGGA+AGG + chr1_4:29092861-29092880 Msa0159130:intron 40.0%
TCCTTCCCCAAAATATCTCT+AGG - chr1_4:29092865-29092884 None:intergenic 40.0%
!! TGGCGTTCTTACACTAGTTT+TGG - chr1_4:29092941-29092960 None:intergenic 40.0%
CACCAAAATGAGCCAAGAAT+TGG + chr1_4:29093057-29093076 Msa0159130:intron 40.0%
! CACCAATTCTTGGCTCATTT+TGG - chr1_4:29093062-29093081 None:intergenic 40.0%
TTAGCTGGAGAGTTGTAAGA+GGG + chr1_4:29093100-29093119 Msa0159130:intron 40.0%
AACGTTAGAGATATGGTGAC+AGG + chr1_4:29093132-29093151 Msa0159130:intron 40.0%
!! TGACAGGCCTTTGAAACATA+TGG + chr1_4:29093148-29093167 Msa0159130:intron 40.0%
TATCTCCTAACAAAGACGGA+AGG + chr1_4:29093405-29093424 Msa0159130:intron 40.0%
TCTACAAGATAGGTGACAGA+AGG + chr1_4:29093638-29093657 Msa0159130:intron 40.0%
CTACAAGATAGGTGACAGAA+GGG + chr1_4:29093639-29093658 Msa0159130:intron 40.0%
GATCAGAGACATGATAGACT+CGG + chr1_4:29093998-29094017 Msa0159130:intron 40.0%
CTCTTGAGTCTTGAATCTCT+TGG - chr1_4:29094029-29094048 None:intergenic 40.0%
! CATACTGACATGGTCAGTTT+TGG + chr1_4:29094202-29094221 Msa0159130:intron 40.0%
GAATACATGTACACCTTTCC+AGG + chr1_4:29094270-29094289 Msa0159130:intron 40.0%
CAATCATATACTCCCTGGAA+AGG - chr1_4:29094286-29094305 None:intergenic 40.0%
! ATTGATTTAGTAGGAAGGCC+CGG + chr1_4:29094302-29094321 Msa0159130:CDS 40.0%
GCAGAATTCACTGAAGAATC+AGG - chr1_4:29094341-29094360 None:intergenic 40.0%
! CTTGGATGACATAATGGAGA+AGG - chr1_4:29094380-29094399 None:intergenic 40.0%
CTTCTCCATTATGTCATCCA+AGG + chr1_4:29094378-29094397 Msa0159130:CDS 40.0%
AGGTGATGAAGACTGACAAA+GGG - chr1_4:29094626-29094645 None:intergenic 40.0%
TTTGTCAGTCTTCATCACCT+GGG + chr1_4:29094626-29094645 Msa0159130:intron 40.0%
!!! GTTTGCTGTTTTTGTGGACA+TGG - chr1_4:29094732-29094751 None:intergenic 40.0%
!!! CATGTGGTTTGCTGTTTTTG+TGG - chr1_4:29094738-29094757 None:intergenic 40.0%
GCTCAACCCAAAATTCTAAG+AGG - chr1_4:29095250-29095269 None:intergenic 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr1_4:29095272-29095291 None:intergenic 40.0%
TAAGAGGGATAAACTAGAGG+GGG - chr1_4:29095314-29095333 None:intergenic 40.0%
CTAAGAGGGATAAACTAGAG+GGG - chr1_4:29095315-29095334 None:intergenic 40.0%
! CTCGACCCAAAATTCTAAGA+GGG - chr1_4:29095329-29095348 None:intergenic 40.0%
!! CGGTTTTGTAAGGTTGAGTT+AGG - chr1_4:29095272-29095291 None:intergenic 40.0%
AATCAGATGCGAAATCGGAT+GGG + chr1_4:29095576-29095595 Msa0159130:intron 40.0%
! CCAGGAATTTTGAATAGTGG+GGG - chr1_4:29095791-29095810 None:intergenic 40.0%
TGCTATCAGGTTACCACTAT+CGG - chr1_4:29095940-29095959 None:intergenic 40.0%
CACCAACAAGCCAATTTGAA+AGG - chr1_4:29096029-29096048 None:intergenic 40.0%
!! TTCAAATTGGCTTGTTGGTG+AGG + chr1_4:29096029-29096048 Msa0159130:intron 40.0%
!! TTGTTGTGGGTGTTTTGTTG+AGG + chr1_4:29096114-29096133 Msa0159130:intron 40.0%
TTTCCTAGTAGCTATTGTGG+TGG + chr1_4:29096140-29096159 Msa0159130:intron 40.0%
AAACCACCACAATAGCTACT+AGG - chr1_4:29096146-29096165 None:intergenic 40.0%
TTTCTTCCTATGCCGTATCA+AGG - chr1_4:29096387-29096406 None:intergenic 40.0%
!!! TTGCTGATTTTCATCATGCC+AGG + chr1_4:29096489-29096508 Msa0159130:intron 40.0%
!! AGGAGGTACTGTTGATTGTA+GGG + chr1_4:29096509-29096528 Msa0159130:intron 40.0%
! TGTTGATTGTAGGGACAAAG+TGG + chr1_4:29096518-29096537 Msa0159130:CDS 40.0%
!! ATGTTTGGTGCAAACTATGC+TGG + chr1_4:29096558-29096577 Msa0159130:CDS 40.0%
ATTGAAAGACACGTGTTCCT+CGG - chr1_4:29096794-29096813 None:intergenic 40.0%
!! CTCTAAGACAAAGACTGCAT+GGG - chr1_4:29096981-29097000 None:intergenic 40.0%
!! TCTCTAAGACAAAGACTGCA+TGG - chr1_4:29096982-29097001 None:intergenic 40.0%
! ATTTGGAACTGTACTTCGTG+CGG + chr1_4:29097055-29097074 Msa0159130:CDS 40.0%
!!! GAGGGAGCATTTTATAAAGC+TGG - chr1_4:29097284-29097303 None:intergenic 40.0%
CTCTATTGTTATACTCCCTC+TGG - chr1_4:29097415-29097434 None:intergenic 40.0%
AAGGGAGTAGAGTGTAATTC+AGG - chr1_4:29097567-29097586 None:intergenic 40.0%
ACCAAGTGTTTATCAAGGCA+GGG + chr1_4:29097833-29097852 Msa0159130:intron 40.0%
ATTCAATCATCTTTCAGGGG+AGG + chr1_4:29097893-29097912 Msa0159130:intron 40.0%
TATACTTTGCATAAGAGGGG+AGG + chr1_4:29097935-29097954 Msa0159130:intron 40.0%
ATACTTTGCATAAGAGGGGA+GGG + chr1_4:29097936-29097955 Msa0159130:intron 40.0%
TTGGTATAGAGGTCATTCCA+TGG - chr1_4:29098266-29098285 None:intergenic 40.0%
TCTCTCCAGTGAACTTTCTT+AGG - chr1_4:29098330-29098349 None:intergenic 40.0%
ATCCAACTAAGAGATCTAGG+AGG + chr1_4:29098356-29098375 Msa0159130:intron 40.0%
TTCCTCCTAGATCTCTTAGT+TGG - chr1_4:29098361-29098380 None:intergenic 40.0%
!! CAGGCTCTTTTGTTTCAAAC+AGG - chr1_4:29098515-29098534 None:intergenic 40.0%
! CTGTTTGAAACAAAAGAGCC+TGG + chr1_4:29098513-29098532 Msa0159130:intron 40.0%
! ATGATGCTGATGCTTTTGCA+TGG + chr1_4:29098614-29098633 Msa0159130:intron 40.0%
! TGCTTTTGCATGGATGTGTA+AGG + chr1_4:29098624-29098643 Msa0159130:intron 40.0%
CTTGTTCACTTGTACACTCT+AGG - chr1_4:29098747-29098766 None:intergenic 40.0%
CTCTAGGTGGATAATTTCCT+TGG + chr1_4:29098798-29098817 Msa0159130:intron 40.0%
TAGGTGGATAATTTCCTTGG+TGG + chr1_4:29098801-29098820 Msa0159130:intron 40.0%
CTAAACAGTAAACACCACCA+AGG - chr1_4:29098818-29098837 None:intergenic 40.0%
CTTCATCTACATTGTCATCC+TGG - chr1_4:29098921-29098940 None:intergenic 40.0%
CTGAAGGGTAACACAGTATT+TGG - chr1_4:29099105-29099124 None:intergenic 40.0%
CAAATACTGTGTTACCCTTC+AGG + chr1_4:29099103-29099122 Msa0159130:intron 40.0%
GTGAAGATACTTAAGGTGCA+AGG + chr1_4:29099134-29099153 Msa0159130:CDS 40.0%
!!! AAGGTGCAAGGTTTTGATTC+CGG + chr1_4:29099146-29099165 Msa0159130:CDS 40.0%
!!! TTCTTTTTCAGATTGAGGCC+AGG + chr1_4:29099240-29099259 Msa0159130:intron 40.0%
!!! TCTTTTTCAGATTGAGGCCA+GGG + chr1_4:29099241-29099260 Msa0159130:intron 40.0%
TGCAATTCAAGGAGACCATT+TGG - chr1_4:29099522-29099541 None:intergenic 40.0%
!! TGAGAAGCGTCGTTTAAGTA+TGG + chr1_4:29099594-29099613 Msa0159130:CDS 40.0%
GATATGTTTGTCTAGGCAAG+TGG + chr1_4:29099722-29099741 Msa0159130:intron 40.0%
TGGGAAGAAGATGGATCAAT+GGG - chr1_4:29099993-29100012 None:intergenic 40.0%
AAAGGGAAGAAAGGAGATGA+AGG - chr1_4:29100016-29100035 None:intergenic 40.0%
! TTAGAATAGAGCTAGCTTCC+TGG + chr1_4:29100613-29100632 Msa0159130:intron 40.0%
GAAGAGGACTACTATTAGGA+AGG - chr1_4:29100855-29100874 None:intergenic 40.0%
! GATTTTGTGGAACAGGATCT+AGG + chr1_4:29100888-29100907 Msa0159130:intron 40.0%
GATAGAAAAGCTTGGGTGTA+AGG - chr1_4:29100934-29100953 None:intergenic 40.0%
CTCAACGAGATAGAAAAGCT+TGG - chr1_4:29100942-29100961 None:intergenic 40.0%
AATCTCCTTGCATGCGTTTA+TGG + chr1_4:29101064-29101083 Msa0159130:intron 40.0%
TCAACTCAGGTATGTGACTT+TGG + chr1_4:29101138-29101157 Msa0159130:intron 40.0%
! CTTTCATCTAAAACAGCTGC+TGG + chr1_4:29101189-29101208 Msa0159130:CDS 40.0%
TCTAAATCAGCCTGAATGGA+TGG + chr1_4:29101306-29101325 Msa0159130:intron 40.0%
! AGTTCACCTTTGATGACTTC+TGG - chr1_4:29101334-29101353 None:intergenic 40.0%
! TCAGCTTTGGTGTAATCTTG+TGG + chr1_4:29101377-29101396 Msa0159130:CDS 40.0%
! CAGCTTTGGTGTAATCTTGT+GGG + chr1_4:29101378-29101397 Msa0159130:CDS 40.0%
CAAAATCAGCGCTCAAAAAG+AGG - chr1_4:29101520-29101539 None:intergenic 40.0%
!!! CTCTTTTTGAGCGCTGATTT+TGG + chr1_4:29101518-29101537 Msa0159130:intron 40.0%
ACTGTTAAAGAGTCCCACAT+CGG + chr1_4:29101805-29101824 Msa0159130:intron 40.0%
GACAATCTCTTATCCGATGT+GGG - chr1_4:29101821-29101840 None:intergenic 40.0%
AGACAATCTCTTATCCGATG+TGG - chr1_4:29101822-29101841 None:intergenic 40.0%
! CCCAACCACAATTTCTAAGA+TGG + chr1_4:29101906-29101925 Msa0159130:intron 40.0%
!! CCAACGAATAATTTTGGAGG+AGG - chr1_4:29101940-29101959 None:intergenic 40.0%
CCTCCTCCAAAATTATTCGT+TGG + chr1_4:29101937-29101956 Msa0159130:intron 40.0%
! GCATGAATATAAATGGTGGG+TGG - chr1_4:29101993-29102012 None:intergenic 40.0%
TCATGTGGAGGGGTTTATAT+TGG - chr1_4:29102095-29102114 None:intergenic 40.0%
ATATAAACCCCTCCACATGA+AGG + chr1_4:29102095-29102114 Msa0159130:intron 40.0%
GTATCATACACTCCTTCATG+TGG - chr1_4:29102110-29102129 None:intergenic 40.0%
AGGGTTGTGAGCTAGATAAA+CGG + chr1_4:29102312-29102331 Msa0159130:intron 40.0%
! TTGTGTCTTCCTTTTGTCCT+CGG - chr1_4:29102441-29102460 None:intergenic 40.0%
GATTACCACTGCTCAAATTC+AGG - chr1_4:29102467-29102486 None:intergenic 40.0%
CAGTAAGCATGAAAGGCTAA+AGG + chr1_4:29102519-29102538 Msa0159130:intron 40.0%
TCCATTGTGATTCCAGTGAT+TGG + chr1_4:29102586-29102605 Msa0159130:intron 40.0%
CCATTGTGATTCCAGTGATT+GGG + chr1_4:29102587-29102606 Msa0159130:intron 40.0%
GATGTCGAAAGATGAGTTGT+TGG - chr1_4:29102673-29102692 None:intergenic 40.0%
ACAACTCATCTTTCGACATC+TGG + chr1_4:29102673-29102692 Msa0159130:intron 40.0%
!! TCAGCCCTTCTTTTGATAGT+TGG + chr1_4:29102709-29102728 Msa0159130:intron 40.0%
GCGTCCAACTATCAAAAGAA+GGG - chr1_4:29102716-29102735 None:intergenic 40.0%
TGCGTCCAACTATCAAAAGA+AGG - chr1_4:29102717-29102736 None:intergenic 40.0%
!! TCTTTTGATAGTTGGACGCA+TGG + chr1_4:29102717-29102736 Msa0159130:intron 40.0%
GTAATGATCTATGCACAGAC+GGG - chr1_4:29103020-29103039 None:intergenic 40.0%
!!! TGTTGCAGCTGTTGGTTTTA+TGG + chr1_4:29103096-29103115 Msa0159130:CDS 40.0%
!!! GTTGCAGCTGTTGGTTTTAT+GGG + chr1_4:29103097-29103116 Msa0159130:CDS 40.0%
!!! CTGTTGGTTTTATGGGCAAA+AGG + chr1_4:29103104-29103123 Msa0159130:CDS 40.0%
ATAAGGTCTCATTGAGCCAA+TGG - chr1_4:29103288-29103307 None:intergenic 40.0%
CAACTCATTAACAATGGCTG+TGG + chr1_4:29103323-29103342 Msa0159130:intron 40.0%
TCATTAACAATGGCTGTGGT+GGG + chr1_4:29103327-29103346 Msa0159130:intron 40.0%
ATAACTGGTTAGAGTCTCCT+TGG - chr1_4:29103365-29103384 None:intergenic 40.0%
TAACCAGTTATGCCAACCAT+TGG + chr1_4:29103374-29103393 Msa0159130:intron 40.0%
TTTCTTACTGTAGGGAACCA+AGG + chr1_4:29103476-29103495 Msa0159130:intron 40.0%
TACCATATGAACACGCATTG+CGG - chr1_4:29104096-29104115 None:intergenic 40.0%
CAGCAAGAAATACTATTGGC+AGG - chr1_4:29104176-29104195 None:intergenic 40.0%
CTGCCAATAGTATTTCTTGC+TGG + chr1_4:29104174-29104193 Msa0159130:intron 40.0%
GACCCAGCAAGAAATACTAT+TGG - chr1_4:29104180-29104199 None:intergenic 40.0%
ATCACTGAAAAACACAAGGG+TGG + chr1_4:29104219-29104238 Msa0159130:intron 40.0%
TATTGCTTGGCTTAGGAGTT+AGG - chr1_4:29104336-29104355 None:intergenic 40.0%
! CTTGTTTCTCCTCGTCACAA+TGG - chr1_4:29090575-29090594 None:intergenic 45.0%
! CTACTTGCTCACCACCATTT+TGG - chr1_4:29090599-29090618 None:intergenic 45.0%
GGGAGTTAAGTTTGCGAAAG+AGG + chr1_4:29090640-29090659 Msa0159130:five_prime_UTR 45.0%
CTGAGATAGGAAATGTACGG+CGG + chr1_4:29090680-29090699 Msa0159130:exon 45.0%
CGCTCAATCTAATCGCTTCT+TGG + chr1_4:29090877-29090896 Msa0159130:CDS 45.0%
AGAAGAAGAAGGAGAAGGAG+AGG - chr1_4:29090918-29090937 None:intergenic 45.0%
TGAAAGTGATTGGGGGGAAT+CGG - chr1_4:29090945-29090964 None:intergenic 45.0%
AACGGTGTGAAAGTGATTGG+GGG - chr1_4:29090952-29090971 None:intergenic 45.0%
AAGTTAGCACAACTAGTGCG+TGG - chr1_4:29091287-29091306 None:intergenic 45.0%
GTTAGCAGTTCTCTCAAGGT+AGG - chr1_4:29091743-29091762 None:intergenic 45.0%
ACCTTGAGAGAACTGCTAAC+TGG + chr1_4:29091743-29091762 Msa0159130:CDS 45.0%
CCTTGAGAGAACTGCTAACT+GGG + chr1_4:29091744-29091763 Msa0159130:CDS 45.0%
CTTGAGAGAACTGCTAACTG+GGG + chr1_4:29091745-29091764 Msa0159130:CDS 45.0%
! CGCACCTAAATTTTCCTCGT+CGG - chr1_4:29091949-29091968 None:intergenic 45.0%
CCAATGGGTAAGCTTCCAAT+TGG - chr1_4:29092026-29092045 None:intergenic 45.0%
CCAATTGGAAGCTTACCCAT+TGG + chr1_4:29092023-29092042 Msa0159130:CDS 45.0%
TAGCAAGCGTGTAACTTCCA+TGG - chr1_4:29092779-29092798 None:intergenic 45.0%
ATGGAAGTTACACGCTTGCT+AGG + chr1_4:29092778-29092797 Msa0159130:intron 45.0%
ACCATGTGTGCATCTCATAG+CGG - chr1_4:29092808-29092827 None:intergenic 45.0%
TAATTGTGGGTGTGCACGAA+AGG + chr1_4:29092989-29093008 Msa0159130:intron 45.0%
AATTGTGGGTGTGCACGAAA+GGG + chr1_4:29092990-29093009 Msa0159130:intron 45.0%
TGGACAGTAGCACCAATTCT+TGG - chr1_4:29093072-29093091 None:intergenic 45.0%
CTTAGCTGGAGAGTTGTAAG+AGG + chr1_4:29093099-29093118 Msa0159130:intron 45.0%
TAGCTGGAGAGTTGTAAGAG+GGG + chr1_4:29093101-29093120 Msa0159130:intron 45.0%
CTAGGAACCCAGTAATTGGA+TGG + chr1_4:29093214-29093233 Msa0159130:intron 45.0%
AATTGTGAAGGGGAAACCCT+TGG - chr1_4:29093296-29093315 None:intergenic 45.0%
AGGCTAATGAGGAGCTAACT+AGG - chr1_4:29093345-29093364 None:intergenic 45.0%
GATTCAAGACTCAAGAGCCT+TGG + chr1_4:29094032-29094051 Msa0159130:intron 45.0%
! TAGAGAGTCATTGATTGGGC+AGG - chr1_4:29094063-29094082 None:intergenic 45.0%
TTGATTTAGTAGGAAGGCCC+GGG + chr1_4:29094303-29094322 Msa0159130:CDS 45.0%
!! GTTTCAACTGGCTTGAACCT+TGG - chr1_4:29094398-29094417 None:intergenic 45.0%
CTTGTGTTTGATACCACGTC+AGG + chr1_4:29094476-29094495 Msa0159130:CDS 45.0%
CAGGTGATGAAGACTGACAA+AGG - chr1_4:29094627-29094646 None:intergenic 45.0%
CTTTGTCAGTCTTCATCACC+TGG + chr1_4:29094625-29094644 Msa0159130:intron 45.0%
TTCTTAGTAACTGGGACCAG+CGG + chr1_4:29095019-29095038 Msa0159130:intron 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_4:29095282-29095301 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_4:29095279-29095298 Msa0159130:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG + chr1_4:29095285-29095304 Msa0159130:intron 45.0%
GCTCGACCCAAAATTCTAAG+AGG - chr1_4:29095330-29095349 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr1_4:29095282-29095301 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr1_4:29095279-29095298 Msa0159130:intron 45.0%
ATGTATGGCCAAGCATGTGT+GGG + chr1_4:29095395-29095414 Msa0159130:intron 45.0%
GAATCAGATGCGAAATCGGA+TGG + chr1_4:29095575-29095594 Msa0159130:intron 45.0%
CCCCCACTATTCAAAATTCC+TGG + chr1_4:29095788-29095807 Msa0159130:intron 45.0%
TCTAGATATCCACTCCTGGA+CGG - chr1_4:29095901-29095920 None:intergenic 45.0%
GCTATCAGGTTACCACTATC+GGG - chr1_4:29095939-29095958 None:intergenic 45.0%
GTCCCGCATTTGATGAGATA+AGG - chr1_4:29096079-29096098 None:intergenic 45.0%
! TGCACGCTCTTTGGTCATTT+TGG + chr1_4:29096254-29096273 Msa0159130:intron 45.0%
ATGCAGCGTGATCCTTGATA+CGG + chr1_4:29096372-29096391 Msa0159130:intron 45.0%
! CTGATTTTCATCATGCCAGG+AGG + chr1_4:29096492-29096511 Msa0159130:intron 45.0%
CTACAATCAACAGTACCTCC+TGG - chr1_4:29096510-29096529 None:intergenic 45.0%
!! CAGGAGGTACTGTTGATTGT+AGG + chr1_4:29096508-29096527 Msa0159130:intron 45.0%
! TTTGGTGCAAACTATGCTGG+TGG + chr1_4:29096561-29096580 Msa0159130:CDS 45.0%
TTGGTGCAAACTATGCTGGT+GGG + chr1_4:29096562-29096581 Msa0159130:CDS 45.0%
! GTTTTCTGTCTTAATGGCGC+TGG + chr1_4:29096727-29096746 Msa0159130:intron 45.0%
ATGCCATCTCATTTAGGTCC+TGG + chr1_4:29096766-29096785 Msa0159130:intron 45.0%
GTACCAGGACCTAAATGAGA+TGG - chr1_4:29096772-29096791 None:intergenic 45.0%
GAGTCATGAAGTTGACCTTG+AGG + chr1_4:29096843-29096862 Msa0159130:CDS 45.0%
TCATGAAGTTGACCTTGAGG+AGG + chr1_4:29096846-29096865 Msa0159130:CDS 45.0%
TTGAAGGAGAACATTGGGAC+AGG + chr1_4:29096901-29096920 Msa0159130:CDS 45.0%
TTCACTCTTTCCCATGAGAG+AGG + chr1_4:29097440-29097459 Msa0159130:intron 45.0%
ATTCAGGCATCTCTTAGCAG+AGG - chr1_4:29097551-29097570 None:intergenic 45.0%
GACCAAGTGTTTATCAAGGC+AGG + chr1_4:29097832-29097851 Msa0159130:intron 45.0%
CCAAGTGTTTATCAAGGCAG+GGG + chr1_4:29097834-29097853 Msa0159130:intron 45.0%
TACTTTGCATAAGAGGGGAG+GGG + chr1_4:29097937-29097956 Msa0159130:intron 45.0%
ACGTTACCTTTGCCATTGCT+TGG + chr1_4:29098087-29098106 Msa0159130:intron 45.0%
TCGCTATATGTCGATCTCCT+AGG + chr1_4:29098196-29098215 Msa0159130:intron 45.0%
CCATGGACATGCTTCTACTA+AGG - chr1_4:29098249-29098268 None:intergenic 45.0%
! CCTTAGTAGAAGCATGTCCA+TGG + chr1_4:29098246-29098265 Msa0159130:intron 45.0%
CTAAGAGATCTAGGAGGAAG+AGG + chr1_4:29098362-29098381 Msa0159130:intron 45.0%
TCTAGGAGGAAGAGGAAATG+AGG + chr1_4:29098370-29098389 Msa0159130:intron 45.0%
AGAGGAAATGAGGATTGCGA+TGG + chr1_4:29098380-29098399 Msa0159130:intron 45.0%
ATGAGGATTGCGATGGAAAG+AGG + chr1_4:29098387-29098406 Msa0159130:intron 45.0%
GTATTTAGGAGAGGATGTCC+AGG + chr1_4:29098900-29098919 Msa0159130:intron 45.0%
TTATGCTGTCCTTTCTGCGT+TGG + chr1_4:29099052-29099071 Msa0159130:intron 45.0%
TAACCTCAACCAACGCAGAA+AGG - chr1_4:29099064-29099083 None:intergenic 45.0%
!! TCTGCGTTGGTTGAGGTTAT+AGG + chr1_4:29099065-29099084 Msa0159130:intron 45.0%
!! CTGCGTTGGTTGAGGTTATA+GGG + chr1_4:29099066-29099085 Msa0159130:intron 45.0%
CTTCACAGCAACATCCTGAA+GGG - chr1_4:29099120-29099139 None:intergenic 45.0%
TCTTCACAGCAACATCCTGA+AGG - chr1_4:29099121-29099140 None:intergenic 45.0%
ATGGTCTCCTTGAATTGCAG+AGG + chr1_4:29099523-29099542 Msa0159130:intron 45.0%
CAAGCTTCCTCTGCAATTCA+AGG - chr1_4:29099533-29099552 None:intergenic 45.0%
TATGAACTTCTGCAGATGCC+AGG + chr1_4:29099553-29099572 Msa0159130:CDS 45.0%
GTGGGAAGAAGATGGATCAA+TGG - chr1_4:29099994-29100013 None:intergenic 45.0%
AGATGAAGGTGGGAAGAAGA+TGG - chr1_4:29100002-29100021 None:intergenic 45.0%
GGAAGAAAGGAGATGAAGGT+GGG - chr1_4:29100012-29100031 None:intergenic 45.0%
AAAGAGAGGTAAATGGGCGT+GGG + chr1_4:29100192-29100211 Msa0159130:intron 45.0%
TCTAGGTGGAAAACTGGTCA+TGG - chr1_4:29100757-29100776 None:intergenic 45.0%
AGGCTGCTGGTATAAATTGC+AGG - chr1_4:29100914-29100933 None:intergenic 45.0%
GCATGCAAGGAGATTGTACA+AGG - chr1_4:29101059-29101078 None:intergenic 45.0%
! CTTTGGCCTTTCACGTACAA+AGG + chr1_4:29101155-29101174 Msa0159130:CDS 45.0%
ATGGCACCAGAAGTCATCAA+AGG + chr1_4:29101325-29101344 Msa0159130:CDS 45.0%
TGGTGTAATCTTGTGGGAAC+TGG + chr1_4:29101384-29101403 Msa0159130:CDS 45.0%
GAAGGATTTAACTGCCTCCA+TGG - chr1_4:29101424-29101443 None:intergenic 45.0%
GAGGCAGTTAAATCCTTCAC+AGG + chr1_4:29101426-29101445 Msa0159130:CDS 45.0%
!!! ACCTCAGAAGCTGGTTTTGT+GGG + chr1_4:29101873-29101892 Msa0159130:intron 45.0%
! GGCCCAACGAATAATTTTGG+AGG - chr1_4:29101943-29101962 None:intergenic 45.0%
! GGTGGCCCAACGAATAATTT+TGG - chr1_4:29101946-29101965 None:intergenic 45.0%
TGCTATCAGGTTTCCGCTAT+CGG + chr1_4:29101966-29101985 Msa0159130:intron 45.0%
! TTTTAACATACGCCCAGGAC+TGG - chr1_4:29102025-29102044 None:intergenic 45.0%
! GACTCTTTTAACATACGCCC+AGG - chr1_4:29102030-29102049 None:intergenic 45.0%
ATACACTCCTTCATGTGGAG+GGG - chr1_4:29102105-29102124 None:intergenic 45.0%
CATACACTCCTTCATGTGGA+GGG - chr1_4:29102106-29102125 None:intergenic 45.0%
TCATACACTCCTTCATGTGG+AGG - chr1_4:29102107-29102126 None:intergenic 45.0%
GATGAATCCTAGTAGGAGAG+AGG + chr1_4:29102168-29102187 Msa0159130:intron 45.0%
TCTACATGTACCAGCTCTCA+GGG - chr1_4:29102214-29102233 None:intergenic 45.0%
TTCTACATGTACCAGCTCTC+AGG - chr1_4:29102215-29102234 None:intergenic 45.0%
!! TTCATGTGTCTGGTTCTGCA+TGG + chr1_4:29102284-29102303 Msa0159130:intron 45.0%
CACGTAGAAAATCTCAGGAG+TGG + chr1_4:29102354-29102373 Msa0159130:intron 45.0%
AGGAGTGGCATAAACAAGAG+AGG + chr1_4:29102369-29102388 Msa0159130:intron 45.0%
GTAGTCCAGGAAACAGTATG+TGG - chr1_4:29102419-29102438 None:intergenic 45.0%
AAGCACCTGAATTTGAGCAG+TGG + chr1_4:29102459-29102478 Msa0159130:intron 45.0%
GCAGTGGTAATCACTCATCA+TGG + chr1_4:29102475-29102494 Msa0159130:intron 45.0%
CCCAATCACTGGAATCACAA+TGG - chr1_4:29102590-29102609 None:intergenic 45.0%
CCAAATCTTGTCCCAATCAC+TGG - chr1_4:29102601-29102620 None:intergenic 45.0%
CCAGTGATTGGGACAAGATT+TGG + chr1_4:29102598-29102617 Msa0159130:intron 45.0%
GTATAGGTTGTTGCAGCTGT+TGG + chr1_4:29103088-29103107 Msa0159130:intron 45.0%
GCAAAAGGCTAGAAATTCCG+AGG + chr1_4:29103119-29103138 Msa0159130:CDS 45.0%
ACTTGAGGATTCACATGCCT+CGG - chr1_4:29103139-29103158 None:intergenic 45.0%
TCAATTAAGGCAGCCACTTG+AGG - chr1_4:29103154-29103173 None:intergenic 45.0%
AGACCAGCAGAGCTCAATTA+AGG - chr1_4:29103167-29103186 None:intergenic 45.0%
CTCATTAACAATGGCTGTGG+TGG + chr1_4:29103326-29103345 Msa0159130:intron 45.0%
! TTCCCAGCTCTTGTTCCTTT+TGG + chr1_4:29103867-29103886 Msa0159130:intron 45.0%
! TCCCAGCTCTTGTTCCTTTT+GGG + chr1_4:29103868-29103887 Msa0159130:intron 45.0%
ACCCAAAAGGAACAAGAGCT+GGG - chr1_4:29103872-29103891 None:intergenic 45.0%
TCCAGCTGTCAATTTCCGTT+GGG - chr1_4:29103932-29103951 None:intergenic 45.0%
TTCCAGCTGTCAATTTCCGT+TGG - chr1_4:29103933-29103952 None:intergenic 45.0%
ACAGCTGGAATAGTTAACCC+AGG + chr1_4:29103943-29103962 Msa0159130:intron 45.0%
GGCTGCCCATTTAACAACAT+TGG - chr1_4:29104014-29104033 None:intergenic 45.0%
TGTTGTTAAATGGGCAGCCA+TGG + chr1_4:29104015-29104034 Msa0159130:intron 45.0%
ACCATCCTAGCTATTCGTGA+AGG + chr1_4:29104065-29104084 Msa0159130:intron 45.0%
CCATCCTAGCTATTCGTGAA+GGG + chr1_4:29104066-29104085 Msa0159130:intron 45.0%
ACCATATGAACACGCATTGC+GGG - chr1_4:29104095-29104114 None:intergenic 45.0%
ATGGCAGATTGCGGAATAAC+AGG - chr1_4:29104131-29104150 None:intergenic 45.0%
TGAATTCCCAACCAAAGCCT+AGG + chr1_4:29104299-29104318 Msa0159130:intron 45.0%
GAATTCCCAACCAAAGCCTA+GGG + chr1_4:29104300-29104319 Msa0159130:intron 45.0%
ACTATCACTACCCTAGGCTT+TGG - chr1_4:29104313-29104332 None:intergenic 45.0%
GTTAGGACTATCACTACCCT+AGG - chr1_4:29104319-29104338 None:intergenic 45.0%
! ATTTTATGCAAAACGGGGGG+TGG - chr1_4:29104439-29104458 None:intergenic 45.0%
GCTGAAGAGCTGAATTACTC+TGG + chr1_4:29104548-29104567 Msa0159130:three_prime_UTR 45.0%
GAAGAGCTGAATTACTCTGG+TGG + chr1_4:29104551-29104570 Msa0159130:three_prime_UTR 45.0%
!!! TTTTAAATAAAATAATTATC+GGG + chr1_4:29094527-29094546 Msa0159130:intron 5.0%
!!! AAATAATTTAGAATATATAA+AGG + chr1_4:29096407-29096426 Msa0159130:intron 5.0%
!! AATTAGATAATAAATTATTA+AGG + chr1_4:29101744-29101763 Msa0159130:intron 5.0%
!! ATTAGATAATAAATTATTAA+GGG + chr1_4:29101745-29101764 Msa0159130:intron 5.0%
!! ATATTATATATAACATTAAA+AGG - chr1_4:29104599-29104618 None:intergenic 5.0%
AGATAGGAAATGTACGGCGG+TGG + chr1_4:29090683-29090702 Msa0159130:exon 50.0%
AGAAGAAGGAGAAGGAGAGG+AGG - chr1_4:29090915-29090934 None:intergenic 50.0%
ACGGTGTGAAAGTGATTGGG+GGG - chr1_4:29090951-29090970 None:intergenic 50.0%
CCCAGTTAGCAGTTCTCTCA+AGG - chr1_4:29091747-29091766 None:intergenic 50.0%
AGGAAAATTTAGGTGCGCGC+TGG + chr1_4:29091952-29091971 Msa0159130:CDS 50.0%
AAATTTAGGTGCGCGCTGGA+AGG + chr1_4:29091956-29091975 Msa0159130:CDS 50.0%
CGATGGACACAAAGGCCAAT+GGG - chr1_4:29092041-29092060 None:intergenic 50.0%
TCGATGGACACAAAGGCCAA+TGG - chr1_4:29092042-29092061 None:intergenic 50.0%
GCAATGCTCGATGGACACAA+AGG - chr1_4:29092049-29092068 None:intergenic 50.0%
CTACCGTGTCGAATCGCTAA+GGG + chr1_4:29092371-29092390 Msa0159130:CDS 50.0%
CATCCCTTAGCGATTCGACA+CGG - chr1_4:29092377-29092396 None:intergenic 50.0%
TTTGCGACTTTGTGTGTGGG+TGG + chr1_4:29092506-29092525 Msa0159130:intron 50.0%
TTGCGACTTTGTGTGTGGGT+GGG + chr1_4:29092507-29092526 Msa0159130:intron 50.0%
TGGTCACACTGTGAAGCTGT+GGG + chr1_4:29092676-29092695 Msa0159130:intron 50.0%
GAAGCTGTGGGAGTGAGTAA+TGG + chr1_4:29092688-29092707 Msa0159130:intron 50.0%
AAGCGTGTAACTTCCATGGC+AGG - chr1_4:29092775-29092794 None:intergenic 50.0%
CCATGTGTGCATCTCATAGC+GGG - chr1_4:29092807-29092826 None:intergenic 50.0%
CTGTCCATGCTTAGCTTAGC+TGG + chr1_4:29093085-29093104 Msa0159130:intron 50.0%
CTCTCCAGCTAAGCTAAGCA+TGG - chr1_4:29093092-29093111 None:intergenic 50.0%
AGGAGAGAATCTCTCCTCCA+AGG + chr1_4:29093276-29093295 Msa0159130:intron 50.0%
GGAGAGAATCTCTCCTCCAA+GGG + chr1_4:29093277-29093296 Msa0159130:intron 50.0%
CTCCTAACAAAGACGGAAGG+CGG + chr1_4:29093408-29093427 Msa0159130:intron 50.0%
TGATTTAGTAGGAAGGCCCG+GGG + chr1_4:29094304-29094323 Msa0159130:CDS 50.0%
!! ATCAGGTTGGCATGTATCCC+CGG - chr1_4:29094324-29094343 None:intergenic 50.0%
GCAAAGGAAACAACCTGACG+TGG - chr1_4:29094492-29094511 None:intergenic 50.0%
! GGTTGTTTCCTTTGCCCTTC+TGG + chr1_4:29094497-29094516 Msa0159130:intron 50.0%
!! AAAGGCATCCAGAAGGGCAA+AGG - chr1_4:29094508-29094527 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_4:29095284-29095303 Msa0159130:intron 50.0%
GATGTATGGCCAAGCATGTG+TGG + chr1_4:29095394-29095413 Msa0159130:intron 50.0%
GAAATCGGATGGGAGATGAC+TGG + chr1_4:29095586-29095605 Msa0159130:intron 50.0%
ATTCCTGGATCCGTCACTGA+AGG + chr1_4:29095803-29095822 Msa0159130:intron 50.0%
! ACGCTCTAGATATCCACTCC+TGG - chr1_4:29095905-29095924 None:intergenic 50.0%
GTTACCACTATCGGGTCACT+CGG - chr1_4:29095931-29095950 None:intergenic 50.0%
AGTGGTAACCTGATAGCACG+TGG + chr1_4:29095942-29095961 Msa0159130:intron 50.0%
CGTGATCCTTGATACGGCAT+AGG + chr1_4:29096378-29096397 Msa0159130:intron 50.0%
GCTGGTGGGAACAACCATAT+AGG + chr1_4:29096576-29096595 Msa0159130:CDS 50.0%
TCATTTAGGTCCTGGTACCG+AGG + chr1_4:29096774-29096793 Msa0159130:intron 50.0%
TGAAGTTGACCTTGAGGAGG+AGG + chr1_4:29096849-29096868 Msa0159130:CDS 50.0%
CCCCTGCCTTGATAAACACT+TGG - chr1_4:29097837-29097856 None:intergenic 50.0%
TTACACTACCCTCCCCTCAT+AGG - chr1_4:29097977-29097996 None:intergenic 50.0%
CAAATTTATCTTGCGGGGGC+AGG + chr1_4:29098015-29098034 Msa0159130:intron 50.0%
!! ACACTTGCTTCAAGTTGCCC+AGG - chr1_4:29098534-29098553 None:intergenic 50.0%
!! TGTCCTTTCTGCGTTGGTTG+AGG + chr1_4:29099058-29099077 Msa0159130:intron 50.0%
TTCAGATTGAGGCCAGGGAA+TGG + chr1_4:29099246-29099265 Msa0159130:intron 50.0%
CTGATTGAGGAACCAACACC+TGG - chr1_4:29099574-29099593 None:intergenic 50.0%
! ACGACGCTTCTCACTGATTG+AGG - chr1_4:29099587-29099606 None:intergenic 50.0%
GGGAAGAAAGGAGATGAAGG+TGG - chr1_4:29100013-29100032 None:intergenic 50.0%
GAAAGAGAGGTAAATGGGCG+TGG + chr1_4:29100191-29100210 Msa0159130:intron 50.0%
GGTCATGGAGGAGCAAGATA+TGG - chr1_4:29100742-29100761 None:intergenic 50.0%
AGGTGGAAAACTGGTCATGG+AGG - chr1_4:29100754-29100773 None:intergenic 50.0%
!! ACTTCTGGTGCCATCCATTC+AGG - chr1_4:29101319-29101338 None:intergenic 50.0%
TGGTGACCCTTCAACAACCA+TGG + chr1_4:29101404-29101423 Msa0159130:CDS 50.0%
TGACCCTTCAACAACCATGG+AGG + chr1_4:29101407-29101426 Msa0159130:CDS 50.0%
CTGCCTCCATGGTTGTTGAA+GGG - chr1_4:29101413-29101432 None:intergenic 50.0%
ACTGCCTCCATGGTTGTTGA+AGG - chr1_4:29101414-29101433 None:intergenic 50.0%
GCAATCTTCACCTCAGAAGC+TGG + chr1_4:29101864-29101883 Msa0159130:intron 50.0%
!!! CACCTCAGAAGCTGGTTTTG+TGG + chr1_4:29101872-29101891 Msa0159130:intron 50.0%
ACCCACAAAACCAGCTTCTG+AGG - chr1_4:29101877-29101896 None:intergenic 50.0%
!! GATAGCGGAAACCTGATAGC+AGG - chr1_4:29101967-29101986 None:intergenic 50.0%
GCTATCAGGTTTCCGCTATC+GGG + chr1_4:29101967-29101986 Msa0159130:intron 50.0%
ATGCTCCAAATGTCCAGTCC+TGG + chr1_4:29102009-29102028 Msa0159130:intron 50.0%
TGCTCCAAATGTCCAGTCCT+GGG + chr1_4:29102010-29102029 Msa0159130:intron 50.0%
AGGTCCCAAGTGAGACACAT+TGG + chr1_4:29102188-29102207 Msa0159130:intron 50.0%
AGGGCCAATGTGTCTCACTT+GGG - chr1_4:29102195-29102214 None:intergenic 50.0%
AGGTCCTATCTCTGCTTGAC+TGG + chr1_4:29102389-29102408 Msa0159130:intron 50.0%
GGTCCTATCTCTGCTTGACT+GGG + chr1_4:29102390-29102409 Msa0159130:intron 50.0%
TTGCCCAGTCAAGCAGAGAT+AGG - chr1_4:29102396-29102415 None:intergenic 50.0%
GGCAACCACATACTGTTTCC+TGG + chr1_4:29102411-29102430 Msa0159130:intron 50.0%
TACTGTTTCCTGGACTACCG+AGG + chr1_4:29102421-29102440 Msa0159130:intron 50.0%
TATGCACAGACGGGATAGTG+AGG - chr1_4:29103011-29103030 None:intergenic 50.0%
GAGGCATGTGAATCCTCAAG+TGG + chr1_4:29103138-29103157 Msa0159130:CDS 50.0%
CTGCCTTAATTGAGCTCTGC+TGG + chr1_4:29103161-29103180 Msa0159130:CDS 50.0%
CTGGTTAGAGTCTCCTTGGT+GGG - chr1_4:29103361-29103380 None:intergenic 50.0%
ACTGGTTAGAGTCTCCTTGG+TGG - chr1_4:29103362-29103381 None:intergenic 50.0%
TGGCCAATGGTTGGCATAAC+TGG - chr1_4:29103380-29103399 None:intergenic 50.0%
CTTACTGTAGGGAACCAAGG+AGG + chr1_4:29103479-29103498 Msa0159130:intron 50.0%
GACCCAAAAGGAACAAGAGC+TGG - chr1_4:29103873-29103892 None:intergenic 50.0%
ACCCAACGGAAATTGACAGC+TGG + chr1_4:29103928-29103947 Msa0159130:intron 50.0%
TCTGTCACTCCATTCTGCCA+TGG - chr1_4:29104035-29104054 None:intergenic 50.0%
CCCTTCACGAATAGCTAGGA+TGG - chr1_4:29104069-29104088 None:intergenic 50.0%
GCATCCCTTCACGAATAGCT+AGG - chr1_4:29104073-29104092 None:intergenic 50.0%
GCAGATTGCGGAATAACAGG+TGG - chr1_4:29104128-29104147 None:intergenic 50.0%
! GGCTTTGGTTGGGAATTCAG+AGG - chr1_4:29104298-29104317 None:intergenic 50.0%
! CACTACCCTAGGCTTTGGTT+GGG - chr1_4:29104308-29104327 None:intergenic 50.0%
! TCACTACCCTAGGCTTTGGT+TGG - chr1_4:29104309-29104328 None:intergenic 50.0%
GAGCTGAATTACTCTGGTGG+TGG + chr1_4:29104554-29104573 Msa0159130:three_prime_UTR 50.0%
GAAGGAGAAGGAGAGGAGGT+AGG - chr1_4:29090911-29090930 None:intergenic 55.0%
CCTTAGCGATTCGACACGGT+AGG - chr1_4:29092373-29092392 None:intergenic 55.0%
CCTACCGTGTCGAATCGCTA+AGG + chr1_4:29092370-29092389 Msa0159130:CDS 55.0%
GACTTTGTGTGTGGGTGGGT+CGG + chr1_4:29092511-29092530 Msa0159130:intron 55.0%
ACTTTGTGTGTGGGTGGGTC+GGG + chr1_4:29092512-29092531 Msa0159130:intron 55.0%
CTGGTCACACTGTGAAGCTG+TGG + chr1_4:29092675-29092694 Msa0159130:intron 55.0%
TTTGCCAGACAGACCTGCCA+TGG + chr1_4:29092759-29092778 Msa0159130:intron 55.0%
ACTTCCATGGCAGGTCTGTC+TGG - chr1_4:29092766-29092785 None:intergenic 55.0%
CCCGCTATGAGATGCACACA+TGG + chr1_4:29092804-29092823 Msa0159130:intron 55.0%
TGTGAAGGGGAAACCCTTGG+AGG - chr1_4:29093293-29093312 None:intergenic 55.0%
CTAACAAAGACGGAAGGCGG+CGG + chr1_4:29093411-29093430 Msa0159130:intron 55.0%
TAACAAAGACGGAAGGCGGC+GGG + chr1_4:29093412-29093431 Msa0159130:intron 55.0%
TGATTGGGCAGGAGAGACCA+AGG - chr1_4:29094052-29094071 None:intergenic 55.0%
!! TCAGGTTGGCATGTATCCCC+GGG - chr1_4:29094323-29094342 None:intergenic 55.0%
GAAGCCCTCACCTTACAAGC+CGG - chr1_4:29095292-29095311 None:intergenic 55.0%
! TTTTAACACCCCCACCGTCC+AGG + chr1_4:29095884-29095903 Msa0159130:intron 55.0%
ATATCCACTCCTGGACGGTG+GGG - chr1_4:29095896-29095915 None:intergenic 55.0%
GATATCCACTCCTGGACGGT+GGG - chr1_4:29095897-29095916 None:intergenic 55.0%
AGATATCCACTCCTGGACGG+TGG - chr1_4:29095898-29095917 None:intergenic 55.0%
TGATCCGAGTGACCCGATAG+TGG + chr1_4:29095924-29095943 Msa0159130:intron 55.0%
CCTGATAGCACGTGGCACAA+CGG + chr1_4:29095950-29095969 Msa0159130:intron 55.0%
GCACGCACAGACGCAATCAA+AGG - chr1_4:29096237-29096256 None:intergenic 55.0%
TGACCTTGAGGAGGAGGATC+TGG + chr1_4:29096855-29096874 Msa0159130:CDS 55.0%
TGTCCAGATCCTCCTCCTCA+AGG - chr1_4:29096861-29096880 None:intergenic 55.0%
AGGAGGATCTGGACATTCCG+TGG + chr1_4:29096866-29096885 Msa0159130:CDS 55.0%
GAACTGTACTTCGTGCGGAC+TGG + chr1_4:29097060-29097079 Msa0159130:CDS 55.0%
CTTCTGCAGATGCCAGGTGT+TGG + chr1_4:29099559-29099578 Msa0159130:CDS 55.0%
AAGCTTGGGTGTAAGGCTGC+TGG - chr1_4:29100927-29100946 None:intergenic 55.0%
AGCGGAAACCTGATAGCAGG+TGG - chr1_4:29101964-29101983 None:intergenic 55.0%
TACGCCCAGGACTGGACATT+TGG - chr1_4:29102017-29102036 None:intergenic 55.0%
CTTGGGACCTCTCTCCTACT+AGG - chr1_4:29102178-29102197 None:intergenic 55.0%
CAGGGCCAATGTGTCTCACT+TGG - chr1_4:29102196-29102215 None:intergenic 55.0%
!! TCTGGTTCTGCATGGAGCAC+AGG + chr1_4:29102292-29102311 Msa0159130:intron 55.0%
!! CTGGTTCTGCATGGAGCACA+GGG + chr1_4:29102293-29102312 Msa0159130:intron 55.0%
! CCTTTTGTCCTCGGTAGTCC+AGG - chr1_4:29102432-29102451 None:intergenic 55.0%
CCTGGACTACCGAGGACAAA+AGG + chr1_4:29102429-29102448 Msa0159130:intron 55.0%
CTGCGAGCAATACGAGAGTC+CGG + chr1_4:29102542-29102561 Msa0159130:intron 55.0%
TGAGGAAGGAGCTCAACCAG+AGG - chr1_4:29102993-29103012 None:intergenic 55.0%
CACAGACGGGATAGTGAGGA+AGG - chr1_4:29103007-29103026 None:intergenic 55.0%
GTGGGATTCGAATCCCACCA+AGG + chr1_4:29103345-29103364 Msa0159130:intron 55.0%
ACTGTAGGGAACCAAGGAGG+CGG + chr1_4:29103482-29103501 Msa0159130:intron 55.0%
AATGGGCAGCCATGGCAGAA+TGG + chr1_4:29104023-29104042 Msa0159130:intron 55.0%
GCCCGCAATGCGTGTTCATA+TGG + chr1_4:29104091-29104110 Msa0159130:intron 55.0%
TAGGGGAGGATCTTCCGACG+AGG + chr1_4:29091932-29091951 Msa0159130:intron 60.0%
CGCCGCCTTCCGTCTTTGTT+AGG - chr1_4:29093413-29093432 None:intergenic 60.0%
AACAAAGACGGAAGGCGGCG+GGG + chr1_4:29093413-29093432 Msa0159130:intron 60.0%
!! AACCGGCTTGTAAGGCGAGC+AGG + chr1_4:29095367-29095386 Msa0159130:intron 60.0%
!! ACCGGCTTGTAAGGCGAGCA+GGG + chr1_4:29095368-29095387 Msa0159130:intron 60.0%
TCCCTGCTCGCCTTACAAGC+CGG - chr1_4:29095372-29095391 None:intergenic 60.0%
GCTTGTAAGGCGAGCAGGGA+CGG + chr1_4:29095372-29095391 Msa0159130:intron 60.0%
GGCACAAGCCCACACATGCT+TGG - chr1_4:29095406-29095425 None:intergenic 60.0%
!! TCGCCTTCAGTGACGGATCC+AGG - chr1_4:29095809-29095828 None:intergenic 60.0%
TGGATCCGTCACTGAAGGCG+AGG + chr1_4:29095808-29095827 Msa0159130:intron 60.0%
GGATCCGTCACTGAAGGCGA+GGG + chr1_4:29095809-29095828 Msa0159130:intron 60.0%
TATCCACTCCTGGACGGTGG+GGG - chr1_4:29095895-29095914 None:intergenic 60.0%
CCGTTGTGCCACGTGCTATC+AGG - chr1_4:29095953-29095972 None:intergenic 60.0%
GTCTGTGCGTGCACGCTCTT+TGG + chr1_4:29096245-29096264 Msa0159130:intron 60.0%
GACACGTGTTCCTCGGTACC+AGG - chr1_4:29096787-29096806 None:intergenic 60.0%
GAGAGGTAAATGGGCGTGGG+TGG + chr1_4:29100195-29100214 Msa0159130:intron 60.0%
GGGCGTGGGTGGAAGAAGAT+CGG + chr1_4:29100206-29100225 Msa0159130:intron 60.0%
TCGTTGGGCCACCTGCTATC+AGG + chr1_4:29101953-29101972 Msa0159130:intron 60.0%
!! AATGGTGGGTGGCCCGATAG+CGG - chr1_4:29101982-29102001 None:intergenic 60.0%
GACACATTGGCCCTGAGAGC+TGG + chr1_4:29102201-29102220 Msa0159130:intron 60.0%
GAGAAAGAAGGCCGCCTCCT+TGG - chr1_4:29103496-29103515 None:intergenic 60.0%
TTGTGTGTGGGTGGGTCGGG+TGG + chr1_4:29092515-29092534 Msa0159130:intron 65.0%
TGTGTGTGGGTGGGTCGGGT+GGG + chr1_4:29092516-29092535 Msa0159130:intron 65.0%
ACAAAGACGGAAGGCGGCGG+GGG + chr1_4:29093414-29093433 Msa0159130:intron 65.0%
GGGGGAAGGAGGAGGACACA+GGG + chr1_4:29093432-29093451 Msa0159130:intron 65.0%
GGAAGGAGGAGGACACAGGG+CGG + chr1_4:29093435-29093454 Msa0159130:intron 65.0%
GAAGGAGGAGGACACAGGGC+GGG + chr1_4:29093436-29093455 Msa0159130:intron 65.0%
GGCGAGCAGGGACGGATGTA+TGG + chr1_4:29095380-29095399 Msa0159130:intron 65.0%
GGAGCCCTCGCCTTCAGTGA+CGG - chr1_4:29095816-29095835 None:intergenic 65.0%
!! GTACTTCGTGCGGACTGGCG+TGG + chr1_4:29097065-29097084 Msa0159130:CDS 65.0%
GTGTGTGGGTGGGTCGGGTG+GGG + chr1_4:29092517-29092536 Msa0159130:intron 70.0%
TGTGTGGGTGGGTCGGGTGG+GGG + chr1_4:29092518-29092537 Msa0159130:intron 70.0%
CGGGGGAAGGAGGAGGACAC+AGG + chr1_4:29093431-29093450 Msa0159130:intron 70.0%
ACACCCCCACCGTCCAGGAG+TGG + chr1_4:29095889-29095908 Msa0159130:intron 70.0%
GTGTGGGTGGGTCGGGTGGG+GGG + chr1_4:29092519-29092538 Msa0159130:intron 75.0%
TGTGGGTGGGTCGGGTGGGG+GGG + chr1_4:29092520-29092539 Msa0159130:intron 75.0%
AGACGGAAGGCGGCGGGGGA+AGG + chr1_4:29093418-29093437 Msa0159130:intron 75.0%
AAGGCGGCGGGGGAAGGAGG+AGG + chr1_4:29093424-29093443 Msa0159130:intron 75.0%
! CGGAAGGCGGCGGGGGAAGG+AGG + chr1_4:29093421-29093440 Msa0159130:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 29090570 29104820 29090570 ID=Msa0159130;Name=Msa0159130
chr1_4 mRNA 29090570 29104820 29090570 ID=Msa0159130-mRNA-1;Parent=Msa0159130;Name=Msa0159130-mRNA-1;_AED=0.23;_eAED=0.23;_QI=122|0.86|0.93|1|0.93|0.93|16|345|653
chr1_4 exon 29090570 29090976 29090570 ID=Msa0159130-mRNA-1:exon:9414;Parent=Msa0159130-mRNA-1
chr1_4 exon 29091545 29091846 29091545 ID=Msa0159130-mRNA-1:exon:9415;Parent=Msa0159130-mRNA-1
chr1_4 exon 29091935 29092076 29091935 ID=Msa0159130-mRNA-1:exon:9416;Parent=Msa0159130-mRNA-1
chr1_4 exon 29092350 29092453 29092350 ID=Msa0159130-mRNA-1:exon:9417;Parent=Msa0159130-mRNA-1
chr1_4 exon 29094292 29094497 29094292 ID=Msa0159130-mRNA-1:exon:9418;Parent=Msa0159130-mRNA-1
chr1_4 exon 29096511 29096597 29096511 ID=Msa0159130-mRNA-1:exon:9419;Parent=Msa0159130-mRNA-1
chr1_4 exon 29096782 29096922 29096782 ID=Msa0159130-mRNA-1:exon:9420;Parent=Msa0159130-mRNA-1
chr1_4 exon 29097051 29097091 29097051 ID=Msa0159130-mRNA-1:exon:9421;Parent=Msa0159130-mRNA-1
chr1_4 exon 29099125 29099193 29099125 ID=Msa0159130-mRNA-1:exon:9422;Parent=Msa0159130-mRNA-1
chr1_4 exon 29099344 29099444 29099344 ID=Msa0159130-mRNA-1:exon:9423;Parent=Msa0159130-mRNA-1
chr1_4 exon 29099543 29099627 29099543 ID=Msa0159130-mRNA-1:exon:9424;Parent=Msa0159130-mRNA-1
chr1_4 exon 29101147 29101242 29101147 ID=Msa0159130-mRNA-1:exon:9425;Parent=Msa0159130-mRNA-1
chr1_4 exon 29101316 29101447 29101316 ID=Msa0159130-mRNA-1:exon:9426;Parent=Msa0159130-mRNA-1
chr1_4 exon 29103094 29103188 29103094 ID=Msa0159130-mRNA-1:exon:9427;Parent=Msa0159130-mRNA-1
chr1_4 exon 29103489 29103630 29103489 ID=Msa0159130-mRNA-1:exon:9428;Parent=Msa0159130-mRNA-1
chr1_4 exon 29104542 29104820 29104542 ID=Msa0159130-mRNA-1:exon:9429;Parent=Msa0159130-mRNA-1
chr1_4 five_prime_UTR 29090570 29090691 29090570 ID=Msa0159130-mRNA-1:five_prime_utr;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29090692 29090976 29090692 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29091545 29091846 29091545 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29091935 29092076 29091935 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29092350 29092453 29092350 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29094292 29094497 29094292 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29096511 29096597 29096511 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29096782 29096922 29096782 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29097051 29097091 29097051 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29099125 29099193 29099125 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29099344 29099444 29099344 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29099543 29099627 29099543 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29101147 29101242 29101147 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29101316 29101447 29101316 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29103094 29103188 29103094 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 CDS 29103489 29103564 29103489 ID=Msa0159130-mRNA-1:cds;Parent=Msa0159130-mRNA-1
chr1_4 three_prime_UTR 29103565 29103630 29103565 ID=Msa0159130-mRNA-1:three_prime_utr;Parent=Msa0159130-mRNA-1
chr1_4 three_prime_UTR 29104542 29104820 29104542 ID=Msa0159130-mRNA-1:three_prime_utr;Parent=Msa0159130-mRNA-1
Gene Sequence

>Msa0159130

ATGTACGGCGGTGGTGAGCGTGAATGCGAATCTGAGAGCACGATGATGATTATGCAGAACGATGAAGATGAAGAAGACGAAGAAGGTTCTTCTTCTTCTTTCAAGAGCTGGGCAAAGCAAACAGAAGAGAGCTATCAATTGCAGCTCGCACTTGCTCTTCGCATTTCATCTCACTCTGCTTCTTCCGCTCAATCTAATCGCTTCTTGGATTTGGAACCTACCTCCTCTCCTTCTCCTTCTTCTTCTTCTTCCGATTCCCCCCAATCACTTTCACACCGTTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAGTTCTAGACGGATTTTACCTAATTCATGGGATGGATGCATATACATGGACTATAAGTACCGATATGCAGAATGTTGGTATGATTCCATCATTTGAATCACTAATGTCGGTGAAACCGTGTGATAACTCGTCAGTTGTAGTGGTTGCTATTGACAAATCTAGAGACCCTACCTTGAGAGAACTGCTAACTGGGGTATTAAGTCTTTCAAGTAACTGGATTACCATCAAAGATGCAACTGATCAGCTTGCAAATCTTGTTTGTAGTAGGATGGGGGGAGGATCTTCCGACGAGGAAAATTTAGGTGCGCGCTGGAAGGAATGCTCTGATATTCTTAAAAGCTGTCTACAGTGTATCATTCTTCCAATTGGAAGCTTACCCATTGGCCTTTGTGTCCATCGAGCATTGCTCTTTAAAGTGTTAGCGGATTTAATCAACCTACCGTGTCGAATCGCTAAGGGATGCAAGTATTGTAGAAAGGACATGGGTGCTTCTTGTATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCCGGGGATACATGCCAACCTGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCTCCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACAATGGCCCAATTGTATTTCTTGGACAATCAAGCACTGCATCTTGTGTTTGATACCACGTCAGGAGGTACTGTTGATTGTAGGGACAAAGTGGATCTTCAGCAAACTGAAATGTTTGGTGCAAACTATGCTGGTGGGAACAACCATATAGGTCCTGGTACCGAGGAACACGTGTCTTTCAATGAAGCAAACCAATCAGTAGTGAATTATTCGAGTCATGAAGTTGACCTTGAGGAGGAGGATCTGGACATTCCGTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTACTTCGTGCGGACTGGCGTGGCTCTGATGTTGCTGTGAAGATACTTAAGGTGCAAGGTTTTGATTCCGGACGATTTGAAGAGTTTCTAAAGGAGGTCACACTCATGAAGCGTCTACGTCATCCAAACATTGTACTTCTAATGGGCGCTGTTATCCAACCACCAAAATTATCAATAGTAACAGAATATTTATCAAGAGGAAGCTTGTATGAACTTCTGCAGATGCCAGGTGTTGGTTCCTCAATCAGTGAGAAGCGTCGTTTAAGTATGGCATATGACGTGGTATGTGACTTTGGCCTTTCACGTACAAAGGCAAATACATATCTTTCATCTAAAACAGCTGCTGGAACTGTAAGTTCTACTCCTCAACTGAAAAGCCCTGAATGGATGGCACCAGAAGTCATCAAAGGTGAACTATCAAATGAAAAATGCGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTGGTGACCCTTCAACAACCATGGAGGCAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGGCAAAAGGCTAGAAATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTAATTGAGCTCTGCTGGTCTACGGAACCAAGGAGGCGGCCTTCTTTCTCCTACATTATGAAATGTTTGCAGCAAATAATTGCCAATGCTAAAGTGTGA
Protein sequence

>Msa0159130

MYGGGERECESESTMMIMQNDEDEEDEEGSSSSFKSWAKQTEESYQLQLALALRISSHSASSAQSNRFLDLEPTSSPSPSSSSSDSPQSLSHRFWVNGCLQYSDKVLDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVAIDKSRDPTLRELLTGVLSLSSNWITIKDATDQLANLVCSRMGGGSSDEENLGARWKECSDILKSCLQCIILPIGSLPIGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCIVQFGSDREYMIDLVGRPGDTCQPDSSVNSASSMLIPSPLCHPRFKPVETAEYTKTMAQLYFLDNQALHLVFDTTSGGTVDCRDKVDLQQTEMFGANYAGGNNHIGPGTEEHVSFNEANQSVVNYSSHEVDLEEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSGRFEEFLKEVTLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLQMPGVGSSISEKRRLSMAYDVVCDFGLSRTKANTYLSSKTAAGTVSSTPQLKSPEWMAPEVIKGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVGFMGKRLEIPRHVNPQVAALIELCWSTEPRRRPSFSYIMKCLQQIIANAKV*