Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161240 | KEH41670.1 | 46.186 | 236 | 101 | 8 | 18 | 242 | 16 | 236 | 9.82e-41 | 157 |
| Msa0161240 | KEH41670.1 | 71.713 | 251 | 42 | 5 | 249 | 490 | 16 | 246 | 1.11e-108 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161240 | A0A072VU80 | 46.186 | 236 | 101 | 8 | 18 | 242 | 16 | 236 | 4.69e-41 | 157 |
| Msa0161240 | A0A072VU80 | 71.713 | 251 | 42 | 5 | 249 | 490 | 16 | 246 | 5.29e-109 | 333 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0161240 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161240 | MtrunA17_Chr1g0174861 | 71.713 | 251 | 42 | 5 | 249 | 490 | 16 | 246 | 1.02e-112 | 333 |
| Msa0161240 | MtrunA17_Chr1g0174861 | 46.186 | 236 | 101 | 8 | 18 | 242 | 16 | 236 | 9.04e-45 | 157 |
| Msa0161240 | MtrunA17_Chr1g0174871 | 66.176 | 272 | 70 | 5 | 1 | 255 | 1 | 267 | 4.41e-93 | 285 |
| Msa0161240 | MtrunA17_Chr1g0174871 | 60.769 | 260 | 83 | 7 | 265 | 508 | 29 | 285 | 1.37e-86 | 268 |
| Msa0161240 | MtrunA17_Chr1g0169521 | 35.473 | 296 | 135 | 9 | 258 | 507 | 30 | 315 | 3.56e-39 | 144 |
| Msa0161240 | MtrunA17_Chr1g0169561 | 35.017 | 297 | 133 | 8 | 258 | 506 | 30 | 314 | 3.63e-39 | 144 |
| Msa0161240 | MtrunA17_Chr1g0174001 | 39.500 | 200 | 87 | 7 | 336 | 507 | 1 | 194 | 5.25e-27 | 107 |
| Msa0161240 | MtrunA17_Chr1g0172961 | 34.711 | 242 | 121 | 9 | 258 | 468 | 23 | 258 | 6.30e-26 | 107 |
| Msa0161240 | MtrunA17_Chr1g0172861 | 31.884 | 276 | 134 | 12 | 258 | 502 | 23 | 275 | 5.90e-24 | 101 |
| Msa0161240 | MtrunA17_Chr7g0214511 | 35.849 | 212 | 99 | 8 | 317 | 507 | 91 | 286 | 1.55e-22 | 97.8 |
| Msa0161240 | MtrunA17_Chr4g0037041 | 44.094 | 127 | 53 | 5 | 257 | 374 | 22 | 139 | 3.92e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGGTCTCGTATCTTAT+TGG | 0.208428 | 1_4:+36073280 | None:intergenic |
| AGCACCAACAACTTTCTTAA+AGG | 0.236987 | 1_4:-36073505 | Msa0161240:CDS |
| TACCCTTCTTCGAACCATTT+TGG | 0.254107 | 1_4:+36073359 | None:intergenic |
| ATAATTCCAGCTCCGTTTCT+TGG | 0.269877 | 1_4:+36079762 | None:intergenic |
| ATAATCCCAGCTCCGTTTCT+TGG | 0.287583 | 1_4:+36073264 | None:intergenic |
| GAAGAAAGTTGTTGCCTCTA+TGG | 0.295075 | 1_4:+36080010 | None:intergenic |
| AGAGGCAACAACTTTCTTCT+AGG | 0.323367 | 1_4:-36080006 | Msa0161240:CDS |
| ATGAAATGGCACAGCCAAAA+TGG | 0.332105 | 1_4:-36073373 | Msa0161240:CDS |
| GTTCTCTACATTGTCATCAT+TGG | 0.335954 | 1_4:+36072994 | None:intergenic |
| GTTTGAGTAATAAGTCCTTT+TGG | 0.343516 | 1_4:+36073043 | None:intergenic |
| TGAATCACCGTGACTGTAAA+AGG | 0.346155 | 1_4:-36073165 | Msa0161240:CDS |
| ACTCTCATCACAAACCAAAA+AGG | 0.357704 | 1_4:-36080125 | Msa0161240:CDS |
| TCTTCGAAGTCAAACCATAT+TGG | 0.359710 | 1_4:+36079863 | None:intergenic |
| GTTCTCTTCATTATCATCAT+TGG | 0.362989 | 1_4:+36079447 | None:intergenic |
| ATGAAATCGCACAGCCAATA+TGG | 0.368027 | 1_4:-36079877 | Msa0161240:CDS |
| TCAACTTCACCAGTGTTGTT+TGG | 0.375897 | 1_4:+36079388 | None:intergenic |
| ATCATTGGAAGCAGATTGAT+TGG | 0.381296 | 1_4:+36079462 | None:intergenic |
| CAAATTTAAACGCTAAATAG+TGG | 0.394892 | 1_4:+36072859 | None:intergenic |
| TGATTCCCATCAAGGTTGTT+AGG | 0.398895 | 1_4:+36079682 | None:intergenic |
| AAATACTTTCTCAAATCAAT+TGG | 0.400225 | 1_4:+36079805 | None:intergenic |
| CGATCACCTAACAACCTTGA+TGG | 0.406250 | 1_4:-36079688 | Msa0161240:CDS |
| TTTACCTTTAAGAAAGTTGT+TGG | 0.419418 | 1_4:+36073501 | None:intergenic |
| TGCCTCTATGGAATGCTTTG+TGG | 0.438332 | 1_4:+36080022 | None:intergenic |
| TCATCTACAACATCATTTGC+CGG | 0.440063 | 1_4:+36072884 | None:intergenic |
| TAAGAAAGTTGTTGGTGCTA+TGG | 0.440297 | 1_4:+36073509 | None:intergenic |
| CTTTGAATGGACACATGAAA+TGG | 0.459517 | 1_4:-36073387 | Msa0161240:CDS |
| TCATCTGTCAATGCACTGAA+TGG | 0.463276 | 1_4:-36079904 | Msa0161240:CDS |
| TTCTTGGTCACATAACTCAT+TGG | 0.463818 | 1_4:+36079778 | None:intergenic |
| TCATGTTGCAAAAGCAATGC+TGG | 0.472244 | 1_4:-36079722 | Msa0161240:CDS |
| CTCTACATTGTCATCATTGG+AGG | 0.472478 | 1_4:+36072997 | None:intergenic |
| TTGGTCTCGTATCTTATTGG+TGG | 0.473127 | 1_4:+36073283 | None:intergenic |
| ACGGTGATTCACATTAAGAT+TGG | 0.473501 | 1_4:+36073177 | None:intergenic |
| CAATGGATGGAAACTGATCT+AGG | 0.474117 | 1_4:+36073323 | None:intergenic |
| ATATGGTTTGACTTCGAAGA+AGG | 0.481456 | 1_4:-36079860 | Msa0161240:CDS |
| ATCCGTTTCATCACCTTCAT+CGG | 0.483860 | 1_4:+36072967 | None:intergenic |
| TGGTGCTATGGAATTGTTTG+TGG | 0.484496 | 1_4:+36073521 | None:intergenic |
| TACTTTCTCAAATCAATTGG+TGG | 0.486384 | 1_4:+36079808 | None:intergenic |
| CAGCCAAAATGGTTCGAAGA+AGG | 0.488255 | 1_4:-36073362 | Msa0161240:CDS |
| TGTGCTAGAGAATTCACAAC+TGG | 0.492819 | 1_4:-36073559 | Msa0161240:CDS |
| GAATGCTTTGTGGCCGCCGA+GGG | 0.493083 | 1_4:+36080032 | None:intergenic |
| CAAATACTTTGTCAGATCAA+TGG | 0.494617 | 1_4:+36073306 | None:intergenic |
| GAATTGTTTGTGGCCGCCGA+GGG | 0.497780 | 1_4:+36073531 | None:intergenic |
| CAATTGGTGGAAATTGATCC+AGG | 0.509751 | 1_4:+36079821 | None:intergenic |
| GGAATCACCGTGTCACGAAA+AGG | 0.512728 | 1_4:-36079666 | Msa0161240:CDS |
| TACCGATGAAGGTGATGAAA+CGG | 0.519602 | 1_4:-36072969 | Msa0161240:CDS |
| GATCAAACTTTGCAGAAATG+TGG | 0.524856 | 1_4:-36079644 | Msa0161240:CDS |
| TGACACGGTGATTCCCATCA+AGG | 0.527477 | 1_4:+36079674 | None:intergenic |
| GTGAGATTAAAGATTCCAAA+AGG | 0.530313 | 1_4:-36073058 | Msa0161240:CDS |
| TTGGTCACATAACTCATTGG+TGG | 0.531076 | 1_4:+36079781 | None:intergenic |
| ACGAGACCAAGAAACGGAGC+TGG | 0.539882 | 1_4:-36073270 | Msa0161240:CDS |
| AAAGACAAACATGCTGATGA+TGG | 0.542758 | 1_4:-36073472 | Msa0161240:CDS |
| ACATTGTCATCATTGGAGGC+AGG | 0.544139 | 1_4:+36073001 | None:intergenic |
| GATCACCTAACAACCTTGAT+GGG | 0.547419 | 1_4:-36079687 | Msa0161240:CDS |
| TTCACCACTGGTAACGCCCT+CGG | 0.552306 | 1_4:-36080048 | Msa0161240:CDS |
| ATCAAACTTTGCAGAAATGT+GGG | 0.554714 | 1_4:-36079643 | Msa0161240:intron |
| TGTTAACATTGCTGAAACAA+TGG | 0.555726 | 1_4:-36073224 | Msa0161240:CDS |
| GGAATTGTTTGTGGCCGCCG+AGG | 0.556033 | 1_4:+36073530 | None:intergenic |
| TTCACAACTGGTAATGCCCT+CGG | 0.558819 | 1_4:-36073547 | Msa0161240:CDS |
| TGAGTTATGTGACCAAGAAA+CGG | 0.560971 | 1_4:-36079774 | Msa0161240:CDS |
| AGCCAAAATGGTTCGAAGAA+GGG | 0.561339 | 1_4:-36073361 | Msa0161240:CDS |
| ATGAAGGTGATGAAACGGAT+GGG | 0.561647 | 1_4:-36072964 | Msa0161240:CDS |
| AAAAGGAGTGTTGTTGATCA+TGG | 0.562216 | 1_4:-36080108 | Msa0161240:CDS |
| GGGTAGTAAGATTTATGACC+TGG | 0.563188 | 1_4:-36079839 | Msa0161240:intron |
| GCTGATGATGGTATTAAGAT+CGG | 0.564146 | 1_4:-36073460 | Msa0161240:CDS |
| AAACAATGAAAAGAACAAGT+TGG | 0.564169 | 1_4:-36079536 | Msa0161240:CDS |
| GTAGAGAACAATACCGATGA+AGG | 0.568109 | 1_4:-36072980 | Msa0161240:CDS |
| TTCATGTGTTCTTTGCAACA+AGG | 0.570989 | 1_4:-36073428 | Msa0161240:CDS |
| TATGGTTTGACTTCGAAGAA+GGG | 0.580570 | 1_4:-36079859 | Msa0161240:intron |
| GGAATGCTTTGTGGCCGCCG+AGG | 0.588007 | 1_4:+36080031 | None:intergenic |
| GCAACGAACACATGAATGGT+TGG | 0.590907 | 1_4:+36079939 | None:intergenic |
| CGAGACCAAGAAACGGAGCT+GGG | 0.594941 | 1_4:-36073269 | Msa0161240:CDS |
| AAAAGAACAAGTTGGTGGTG+AGG | 0.597114 | 1_4:-36079528 | Msa0161240:CDS |
| ATGTGACCAAGAAACGGAGC+TGG | 0.597485 | 1_4:-36079768 | Msa0161240:CDS |
| CAATGAAAAGAACAGGTTGG+TGG | 0.599420 | 1_4:-36073080 | Msa0161240:CDS |
| TACTTTGTCAGATCAATGGA+TGG | 0.603001 | 1_4:+36073310 | None:intergenic |
| TGAAGGTGATGAAACGGATG+GGG | 0.603593 | 1_4:-36072963 | Msa0161240:CDS |
| TAAGATACGAGACCAAGAAA+CGG | 0.610128 | 1_4:-36073276 | Msa0161240:CDS |
| GCCGCCGAGGGCGTTACCAG+TGG | 0.610498 | 1_4:+36080044 | None:intergenic |
| GCAAAGAACACATGAATGGT+TGG | 0.613792 | 1_4:+36073435 | None:intergenic |
| TGTGACAGAGAATTCACCAC+TGG | 0.614086 | 1_4:-36080060 | Msa0161240:CDS |
| GATGAAGGTGATGAAACGGA+TGG | 0.616100 | 1_4:-36072965 | Msa0161240:CDS |
| CAATGAAAAGAACAAGTTGG+TGG | 0.617009 | 1_4:-36079533 | Msa0161240:CDS |
| AAACAATGAAAAGAACAGGT+TGG | 0.620052 | 1_4:-36073083 | Msa0161240:CDS |
| TGTTGCAAAGAACACATGAA+TGG | 0.632355 | 1_4:+36073431 | None:intergenic |
| GGCCACAAAGCATTCCATAG+AGG | 0.645608 | 1_4:-36080024 | Msa0161240:CDS |
| ACTGGTGAAGATGATGAAGC+AGG | 0.649250 | 1_4:-36079418 | Msa0161240:CDS |
| TGCTGCAACGAACACATGAA+TGG | 0.655011 | 1_4:+36079935 | None:intergenic |
| AATGAAGAGAACAACAACAC+TGG | 0.663304 | 1_4:-36079436 | Msa0161240:CDS |
| GGTGAGGAACCAAACAACAC+TGG | 0.673005 | 1_4:-36079397 | Msa0161240:CDS |
| TAACATTGCTGAAACAATGG+TGG | 0.675593 | 1_4:-36073221 | Msa0161240:CDS |
| ACCACTGGTAACGCCCTCGG+CGG | 0.680554 | 1_4:-36080045 | Msa0161240:CDS |
| TGAAGATGATGAAGCAGGTG+AGG | 0.685127 | 1_4:-36079413 | Msa0161240:CDS |
| ACAACTGGTAATGCCCTCGG+CGG | 0.704742 | 1_4:-36073544 | Msa0161240:CDS |
| GAAAATGAGAAACATCAACA+AGG | 0.726705 | 1_4:-36073607 | Msa0161240:CDS |
| GATGTGAAGATCAATGAACA+AGG | 0.760498 | 1_4:-36073112 | Msa0161240:CDS |
| GTGAAGATCAATGAACAAGG+TGG | 0.773369 | 1_4:-36073109 | Msa0161240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAACTATTTTTTTGTT+TGG | - | chr1_4:36074294-36074313 | Msa0161240:intron | 10.0% |
| !! | TAAAGTGTAAAATAAATATT+TGG | + | chr1_4:36077068-36077087 | None:intergenic | 10.0% |
| !!! | TTTTATCAGTTTAATTTATT+TGG | - | chr1_4:36077341-36077360 | Msa0161240:intron | 10.0% |
| !!! | ATATATATATTTTTGATGAA+TGG | + | chr1_4:36078557-36078576 | None:intergenic | 10.0% |
| !! | AGAAAATAAAAAAAAAATAC+GGG | - | chr1_4:36078772-36078791 | Msa0161240:intron | 10.0% |
| !!! | AATAAAAGTTTTTTTTTTGA+AGG | + | chr1_4:36078954-36078973 | None:intergenic | 10.0% |
| !! | TCTTATAAATGAATATTAAA+CGG | - | chr1_4:36079042-36079061 | Msa0161240:intron | 10.0% |
| !! | AATTACGTAATAATTTAATT+TGG | + | chr1_4:36079135-36079154 | None:intergenic | 10.0% |
| !!! | TATTACGTAATTTTTTTTTA+AGG | - | chr1_4:36079143-36079162 | Msa0161240:intron | 10.0% |
| !! | AGAATTGATAAAATTTAGTT+GGG | + | chr1_4:36075124-36075143 | None:intergenic | 15.0% |
| !!! | TCTTTGTTTATTTTGTTTTA+AGG | - | chr1_4:36076043-36076062 | Msa0161240:intron | 15.0% |
| !! | TATTAAAAATTCACATTGAA+TGG | - | chr1_4:36076766-36076785 | Msa0161240:intron | 15.0% |
| !! | TATTTGTAAAAGATTCAATT+GGG | + | chr1_4:36078250-36078269 | None:intergenic | 15.0% |
| !! | ATATTTGTAAAAGATTCAAT+TGG | + | chr1_4:36078251-36078270 | None:intergenic | 15.0% |
| !!! | AGATTTTTTTTTTTTTTGAG+AGG | - | chr1_4:36078373-36078392 | Msa0161240:intron | 15.0% |
| !! | TAATAGAATAAATGAGAATA+AGG | - | chr1_4:36078582-36078601 | Msa0161240:intron | 15.0% |
| !! | AATAGAATAAATGAGAATAA+GGG | - | chr1_4:36078583-36078602 | Msa0161240:intron | 15.0% |
| !! | TTTCTCATAAATTATTAAGA+TGG | - | chr1_4:36078647-36078666 | Msa0161240:intron | 15.0% |
| !!! | TATTAATAGGGTTTTTTTAT+TGG | + | chr1_4:36079245-36079264 | None:intergenic | 15.0% |
| !! | AAACATAAATGAAAAGATAT+CGG | + | chr1_4:36079276-36079295 | None:intergenic | 15.0% |
| !! | AAATACTTTCTCAAATCAAT+TGG | + | chr1_4:36073234-36073253 | None:intergenic | 20.0% |
| !! | AAACAAAAAGAAACACTAAT+GGG | + | chr1_4:36073772-36073791 | None:intergenic | 20.0% |
| !! | AAAACAAAAAGAAACACTAA+TGG | + | chr1_4:36073773-36073792 | None:intergenic | 20.0% |
| !! | TTCAAATTAGTGTGAAAATA+TGG | - | chr1_4:36074100-36074119 | Msa0161240:intron | 20.0% |
| !!! | AATCTTCTGTATTTTTCAAA+TGG | + | chr1_4:36074168-36074187 | None:intergenic | 20.0% |
| !! | TCCATGAATAATAAATTTGA+GGG | - | chr1_4:36074191-36074210 | Msa0161240:intron | 20.0% |
| !!! | CATAAAAAGACTAGTTATTA+GGG | + | chr1_4:36074241-36074260 | None:intergenic | 20.0% |
| !!! | TCATAAAAAGACTAGTTATT+AGG | + | chr1_4:36074242-36074261 | None:intergenic | 20.0% |
| !!! | AATTGACTTGAAAATATTTC+AGG | - | chr1_4:36074405-36074424 | Msa0161240:intron | 20.0% |
| !! | TTCAATCTAAGTTATCTATA+GGG | - | chr1_4:36074936-36074955 | Msa0161240:intron | 20.0% |
| !! | GAGAATTGATAAAATTTAGT+TGG | + | chr1_4:36075125-36075144 | None:intergenic | 20.0% |
| !! | TTTGATATATTGTCTTTCTT+TGG | - | chr1_4:36075284-36075303 | Msa0161240:intron | 20.0% |
| !!! | GCTCTTTTTTTTTTTTTTGA+CGG | + | chr1_4:36076565-36076584 | None:intergenic | 20.0% |
| !! | GATTTAGTTGTTTATACATA+CGG | + | chr1_4:36076731-36076750 | None:intergenic | 20.0% |
| !! | GTAAAATAAATATTTGGCAA+TGG | + | chr1_4:36077062-36077081 | None:intergenic | 20.0% |
| !! | TTATTTATTTGACAAGCTAT+TGG | - | chr1_4:36077130-36077149 | Msa0161240:intron | 20.0% |
| !! | AAAAAACAAAGATATTTGCA+TGG | + | chr1_4:36077285-36077304 | None:intergenic | 20.0% |
| !! | TTAAACTGATAAAACATTGT+GGG | + | chr1_4:36077335-36077354 | None:intergenic | 20.0% |
| !! | ATTAAACTGATAAAACATTG+TGG | + | chr1_4:36077336-36077355 | None:intergenic | 20.0% |
| !!! | CAACATTTTAAATTTGAGTT+GGG | - | chr1_4:36077436-36077455 | Msa0161240:intron | 20.0% |
| !!! | AACATTTTAAATTTGAGTTG+GGG | - | chr1_4:36077437-36077456 | Msa0161240:intron | 20.0% |
| !! | TAGATTACACCATAAAAAAT+TGG | - | chr1_4:36077512-36077531 | Msa0161240:intron | 20.0% |
| !!! | TGACCAAATTTTTTATTTCT+TGG | + | chr1_4:36077571-36077590 | None:intergenic | 20.0% |
| !!! | TAGTAGTACTTATTTTGTTT+TGG | - | chr1_4:36077620-36077639 | Msa0161240:intron | 20.0% |
| !! | ACTAAAAAACAAATTAAGTG+TGG | + | chr1_4:36077712-36077731 | None:intergenic | 20.0% |
| !! | GTTATTTACACACAATATTT+GGG | + | chr1_4:36078052-36078071 | None:intergenic | 20.0% |
| !!! | TGTTATTTACACACAATATT+TGG | + | chr1_4:36078053-36078072 | None:intergenic | 20.0% |
| !! | ATTGTAAATAAAGTCGAAAA+TGG | - | chr1_4:36078187-36078206 | Msa0161240:intron | 20.0% |
| !! | ACAATTGTGAAGATTAAAAT+GGG | + | chr1_4:36078222-36078241 | None:intergenic | 20.0% |
| !! | AACAATTGTGAAGATTAAAA+TGG | + | chr1_4:36078223-36078242 | None:intergenic | 20.0% |
| !!! | TCTTAATTTTATTTCCTGTT+TGG | + | chr1_4:36078621-36078640 | None:intergenic | 20.0% |
| !!! | ATCAACTTTTCTTTTTCTTT+TGG | + | chr1_4:36078695-36078714 | None:intergenic | 20.0% |
| !!! | TAGTGAGACTTATTTTAATT+AGG | - | chr1_4:36078888-36078907 | Msa0161240:intron | 20.0% |
| !! | TTTATAAGAGAGATATACAT+TGG | + | chr1_4:36079031-36079050 | None:intergenic | 20.0% |
| !! | TATAAATGAATATTAAACGG+CGG | - | chr1_4:36079045-36079064 | Msa0161240:intron | 20.0% |
| !! | AACATAAATGAAAAGATATC+GGG | + | chr1_4:36079275-36079294 | None:intergenic | 20.0% |
| ! | AAACAATGAAAAGAACAAGT+TGG | - | chr1_4:36073500-36073519 | Msa0161240:CDS | 25.0% |
| !!! | TTCTTTTTGTTTTCAAGTGA+AGG | - | chr1_4:36073780-36073799 | Msa0161240:intron | 25.0% |
| !!! | AGAATGAAATTCTGCTATTT+TGG | - | chr1_4:36073865-36073884 | Msa0161240:intron | 25.0% |
| !! | GTTAATCTATTTTCACCTTT+TGG | - | chr1_4:36074015-36074034 | Msa0161240:intron | 25.0% |
| ! | GTCCATGAATAATAAATTTG+AGG | - | chr1_4:36074190-36074209 | Msa0161240:intron | 25.0% |
| ! | ACCCTCAAATTTATTATTCA+TGG | + | chr1_4:36074195-36074214 | None:intergenic | 25.0% |
| !! | TAGTTATTAGGGCATTAAAT+TGG | + | chr1_4:36074230-36074249 | None:intergenic | 25.0% |
| ! | ATGAATTGAATTGAATGTAG+AGG | - | chr1_4:36074258-36074277 | Msa0161240:intron | 25.0% |
| ! | AACACTTCAATGACAAATAA+TGG | - | chr1_4:36074541-36074560 | Msa0161240:intron | 25.0% |
| !! | ATTTTCTATTGTACTTAGCT+AGG | + | chr1_4:36074605-36074624 | None:intergenic | 25.0% |
| !! | GTTGTCATTTCACTAATTAT+TGG | + | chr1_4:36074632-36074651 | None:intergenic | 25.0% |
| ! | ATCAGATGATAGATTTACTA+AGG | - | chr1_4:36074708-36074727 | Msa0161240:intron | 25.0% |
| ! | TCAGATGATAGATTTACTAA+GGG | - | chr1_4:36074709-36074728 | Msa0161240:intron | 25.0% |
| ! | TAGAAGAATAATTCTCTAGT+GGG | - | chr1_4:36074784-36074803 | Msa0161240:intron | 25.0% |
| ! | TTGAAGAAACCTTCAATTAT+GGG | + | chr1_4:36074921-36074940 | None:intergenic | 25.0% |
| ! | ATTGAAGAAACCTTCAATTA+TGG | + | chr1_4:36074922-36074941 | None:intergenic | 25.0% |
| ! | CTTCAATCTAAGTTATCTAT+AGG | - | chr1_4:36074935-36074954 | Msa0161240:intron | 25.0% |
| !!! | TTATTGCCCTTCATATTTTT+TGG | - | chr1_4:36075004-36075023 | Msa0161240:intron | 25.0% |
| ! | TGGAATCCAAAAAATATGAA+GGG | + | chr1_4:36075013-36075032 | None:intergenic | 25.0% |
| ! | TTGGAATCCAAAAAATATGA+AGG | + | chr1_4:36075014-36075033 | None:intergenic | 25.0% |
| ! | TTGATAAAATTTAGTTGGGA+GGG | + | chr1_4:36075120-36075139 | None:intergenic | 25.0% |
| ! | ATTGATAAAATTTAGTTGGG+AGG | + | chr1_4:36075121-36075140 | None:intergenic | 25.0% |
| !! | TTTTATCAATTCTCAAGAGT+CGG | - | chr1_4:36075131-36075150 | Msa0161240:intron | 25.0% |
| ! | TGAATTAATTTCAGTGGAAA+AGG | + | chr1_4:36075195-36075214 | None:intergenic | 25.0% |
| ! | CAACAATGAATTAATTTCAG+TGG | + | chr1_4:36075201-36075220 | None:intergenic | 25.0% |
| !!! | AATTTTGATGTACAAAACGA+AGG | + | chr1_4:36075234-36075253 | None:intergenic | 25.0% |
| !!! | TTGTTTTAAGTATGTCTTCA+TGG | - | chr1_4:36075908-36075927 | Msa0161240:intron | 25.0% |
| !!! | TTTTTTTTCCAATCCAGTTA+CGG | + | chr1_4:36076292-36076311 | None:intergenic | 25.0% |
| ! | AAACAAGAAACAATACAAAC+AGG | + | chr1_4:36076518-36076537 | None:intergenic | 25.0% |
| ! | ATATTTAGTGATACATGATC+TGG | + | chr1_4:36076842-36076861 | None:intergenic | 25.0% |
| !! | AAAACTAAAAGTGCATTTGA+CGG | + | chr1_4:36076875-36076894 | None:intergenic | 25.0% |
| !!! | TCAAATGCACTTTTAGTTTT+AGG | - | chr1_4:36076875-36076894 | Msa0161240:intron | 25.0% |
| !!! | CACTTTTAGTTTTAGGTTTT+TGG | - | chr1_4:36076882-36076901 | Msa0161240:intron | 25.0% |
| ! | CAAAAGATATTTGCTTGAAA+AGG | + | chr1_4:36077218-36077237 | None:intergenic | 25.0% |
| ! | AATGGATAACATAATACGAA+TGG | + | chr1_4:36077243-36077262 | None:intergenic | 25.0% |
| !! | GCAACATTTTAAATTTGAGT+TGG | - | chr1_4:36077435-36077454 | Msa0161240:intron | 25.0% |
| ! | GAGCCAAGAAATAAAAAATT+TGG | - | chr1_4:36077565-36077584 | Msa0161240:intron | 25.0% |
| !!! | ATTTTGTTTTGGCAATAAGA+TGG | - | chr1_4:36077631-36077650 | Msa0161240:intron | 25.0% |
| ! | TAAGTGTGGTAAATTATAAG+TGG | + | chr1_4:36077698-36077717 | None:intergenic | 25.0% |
| !!! | TCTTTTTCGACAAAAACATA+TGG | - | chr1_4:36077778-36077797 | Msa0161240:intron | 25.0% |
| !!! | ACTCTTTTTTTCCTAACATA+TGG | - | chr1_4:36077829-36077848 | Msa0161240:intron | 25.0% |
| ! | TTATTGAGTTAAATCAACGT+AGG | + | chr1_4:36077923-36077942 | None:intergenic | 25.0% |
| ! | CATTTCCTTTCAAATTTCTT+AGG | - | chr1_4:36078097-36078116 | Msa0161240:intron | 25.0% |
| !!! | GACTTTTGACTTAACAAATA+GGG | + | chr1_4:36078418-36078437 | None:intergenic | 25.0% |
| !!! | TGACTTTTGACTTAACAAAT+AGG | + | chr1_4:36078419-36078438 | None:intergenic | 25.0% |
| !!! | GGAATTTTTTTTTACCAAAC+AGG | - | chr1_4:36078604-36078623 | Msa0161240:intron | 25.0% |
| !! | ACTTTTCTTTTTCTTTTGGT+TGG | + | chr1_4:36078691-36078710 | None:intergenic | 25.0% |
| ! | CTCACTAATCTATATCATAT+GGG | + | chr1_4:36078875-36078894 | None:intergenic | 25.0% |
| ! | TCTCACTAATCTATATCATA+TGG | + | chr1_4:36078876-36078895 | None:intergenic | 25.0% |
| ! | AAGTTATTACGTCATTTAGT+AGG | - | chr1_4:36079167-36079186 | Msa0161240:intron | 25.0% |
| ! | TATTGGAAAATGTTTGATGT+AGG | + | chr1_4:36079228-36079247 | None:intergenic | 25.0% |
| ! | TTAGTGCAATGAAATTGAAA+GGG | + | chr1_4:36079313-36079332 | None:intergenic | 25.0% |
| ! | ATTAGTGCAATGAAATTGAA+AGG | + | chr1_4:36079314-36079333 | None:intergenic | 25.0% |
| !! | ATTTTCATGATCAACAACAT+TGG | + | chr1_4:36079415-36079434 | None:intergenic | 25.0% |
| !! | TTTACCTTTAAGAAAGTTGT+TGG | + | chr1_4:36079538-36079557 | None:intergenic | 25.0% |
| ! | GTAAAAACAATGAAAAGAAC+AGG | - | chr1_4:36079949-36079968 | Msa0161240:CDS | 25.0% |
| AACAAAGAAAAACATGCTGA+TGG | - | chr1_4:36073060-36073079 | Msa0161240:CDS | 30.0% | |
| TACTTTCTCAAATCAATTGG+TGG | + | chr1_4:36073231-36073250 | None:intergenic | 30.0% | |
| ATCAAACTTTGCAGAAATGT+GGG | - | chr1_4:36073393-36073412 | Msa0161240:CDS | 30.0% | |
| ! | TTTTGAATGACAAGGCTATT+CGG | + | chr1_4:36073543-36073562 | None:intergenic | 30.0% |
| ! | CTTGTGATTTTTGAATGACA+AGG | + | chr1_4:36073551-36073570 | None:intergenic | 30.0% |
| GTTCTCTTCATTATCATCAT+TGG | + | chr1_4:36073592-36073611 | None:intergenic | 30.0% | |
| !!! | ATGAAATTCTGCTATTTTGG+TGG | - | chr1_4:36073868-36073887 | Msa0161240:intron | 30.0% |
| TTGTTGTGATAATTTCATCG+TGG | - | chr1_4:36073933-36073952 | Msa0161240:intron | 30.0% | |
| AATATGGAGTTGAATGTTGA+TGG | - | chr1_4:36074116-36074135 | Msa0161240:intron | 30.0% | |
| ACTTCAATGACAAATAATGG+TGG | - | chr1_4:36074544-36074563 | Msa0161240:intron | 30.0% | |
| TTTGATTGTAACTACTCTTG+TGG | - | chr1_4:36074748-36074767 | Msa0161240:intron | 30.0% | |
| GTAGAAGAATAATTCTCTAG+TGG | - | chr1_4:36074783-36074802 | Msa0161240:intron | 30.0% | |
| AGAAGAATAATTCTCTAGTG+GGG | - | chr1_4:36074785-36074804 | Msa0161240:intron | 30.0% | |
| TTCAAGAATGAGTACAAGTA+TGG | + | chr1_4:36074849-36074868 | None:intergenic | 30.0% | |
| AATTATGGGGCAATATCATA+TGG | + | chr1_4:36074907-36074926 | None:intergenic | 30.0% | |
| TGAAGAAACCTTCAATTATG+GGG | + | chr1_4:36074920-36074939 | None:intergenic | 30.0% | |
| ACTCATGAAGTATAACTCTT+TGG | - | chr1_4:36074981-36075000 | Msa0161240:intron | 30.0% | |
| AAACTTCGTAACTTCAACAT+TGG | + | chr1_4:36075033-36075052 | None:intergenic | 30.0% | |
| AATTAGTCACCAGTAAATAG+AGG | + | chr1_4:36075059-36075078 | None:intergenic | 30.0% | |
| ! | TACTGGTGACTAATTTTTGA+CGG | - | chr1_4:36075064-36075083 | Msa0161240:intron | 30.0% |
| TTTATCAATTCTCAAGAGTC+GGG | - | chr1_4:36075132-36075151 | Msa0161240:intron | 30.0% | |
| TGTACAAAACGAAGGAAATT+AGG | + | chr1_4:36075226-36075245 | None:intergenic | 30.0% | |
| CTATGCGTGAATTTATTACT+AGG | + | chr1_4:36075310-36075329 | None:intergenic | 30.0% | |
| CTAGTAATAAATTCACGCAT+AGG | - | chr1_4:36075308-36075327 | Msa0161240:intron | 30.0% | |
| TAGAGCAATGTTATATCTCT+AGG | - | chr1_4:36075381-36075400 | Msa0161240:intron | 30.0% | |
| GTGAGAAAGAAAATGGAAAA+GGG | + | chr1_4:36075586-36075605 | None:intergenic | 30.0% | |
| AGTGAGAAAGAAAATGGAAA+AGG | + | chr1_4:36075587-36075606 | None:intergenic | 30.0% | |
| TCTATATGATATCCTAACCA+TGG | + | chr1_4:36075816-36075835 | None:intergenic | 30.0% | |
| TAGGATATCATATAGATCTC+AGG | - | chr1_4:36075820-36075839 | Msa0161240:intron | 30.0% | |
| TGTTCTACTGCTTTAATGTT+TGG | - | chr1_4:36075859-36075878 | Msa0161240:intron | 30.0% | |
| TCTCAAACATCTGGAAAAAT+TGG | - | chr1_4:36076211-36076230 | Msa0161240:intron | 30.0% | |
| TCAAAGAAATTATCCGTAAC+TGG | - | chr1_4:36076276-36076295 | Msa0161240:intron | 30.0% | |
| !! | TGATCTTTGATTTTCGACAA+TGG | - | chr1_4:36076462-36076481 | Msa0161240:intron | 30.0% |
| !! | TTTGATTTTCGACAATGGAT+GGG | - | chr1_4:36076467-36076486 | Msa0161240:intron | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | chr1_4:36076677-36076696 | None:intergenic | 30.0% |
| AATGGAAATAAGAGCTTATC+AGG | - | chr1_4:36076784-36076803 | Msa0161240:intron | 30.0% | |
| GATATTTGCTTGAAAAGGTT+CGG | + | chr1_4:36077213-36077232 | None:intergenic | 30.0% | |
| CTTAAGTACATGCATGATAT+TGG | - | chr1_4:36077377-36077396 | Msa0161240:intron | 30.0% | |
| !! | TATTGGTTTGAAACTAAGCT+TGG | - | chr1_4:36077394-36077413 | Msa0161240:intron | 30.0% |
| !!! | TTGTGCAGACCAATTTTTTA+TGG | + | chr1_4:36077524-36077543 | None:intergenic | 30.0% |
| ! | AGACTAACTTTGAAAAGTTG+TGG | + | chr1_4:36077750-36077769 | None:intergenic | 30.0% |
| !! | TGTTTTTGTCGAAAAAGATG+AGG | + | chr1_4:36077776-36077795 | None:intergenic | 30.0% |
| ATATGGTGATACTCTCTTAT+TGG | - | chr1_4:36077846-36077865 | Msa0161240:intron | 30.0% | |
| TATGGTGATACTCTCTTATT+GGG | - | chr1_4:36077847-36077866 | Msa0161240:intron | 30.0% | |
| TCCTTTCAAATTTCTTAGGA+TGG | - | chr1_4:36078101-36078120 | Msa0161240:intron | 30.0% | |
| ACCATCCTAAGAAATTTGAA+AGG | + | chr1_4:36078105-36078124 | None:intergenic | 30.0% | |
| TCAAATTTCTTAGGATGGTA+AGG | - | chr1_4:36078106-36078125 | Msa0161240:intron | 30.0% | |
| TCTCACCATTGTAAAAATGT+GGG | + | chr1_4:36078328-36078347 | None:intergenic | 30.0% | |
| TTCTCACCATTGTAAAAATG+TGG | + | chr1_4:36078329-36078348 | None:intergenic | 30.0% | |
| TTTAATTAGGACGCTGTTAA+TGG | - | chr1_4:36078901-36078920 | Msa0161240:intron | 30.0% | |
| TTAAACGGCGGAAAAATAAA+TGG | - | chr1_4:36079057-36079076 | Msa0161240:intron | 30.0% | |
| TCGGGTATCACTTATTAATA+GGG | + | chr1_4:36079257-36079276 | None:intergenic | 30.0% | |
| ATCGGGTATCACTTATTAAT+AGG | + | chr1_4:36079258-36079277 | None:intergenic | 30.0% | |
| TGAATAGAATGATGAGAAGA+AGG | + | chr1_4:36079378-36079397 | None:intergenic | 30.0% | |
| !!! | TGATCAACAACATTGGTTTT+TGG | + | chr1_4:36079408-36079427 | None:intergenic | 30.0% |
| GAAAATGAGAAACATCAACA+AGG | - | chr1_4:36079429-36079448 | Msa0161240:CDS | 30.0% | |
| !! | TCATCGAAAAAAGCTTTGAA+TGG | - | chr1_4:36079636-36079655 | Msa0161240:intron | 30.0% |
| CAAATACTTTGTCAGATCAA+TGG | + | chr1_4:36079733-36079752 | None:intergenic | 30.0% | |
| TGTTAACATTGCTGAAACAA+TGG | - | chr1_4:36079812-36079831 | Msa0161240:CDS | 30.0% | |
| AAACAATGAAAAGAACAGGT+TGG | - | chr1_4:36079953-36079972 | Msa0161240:CDS | 30.0% | |
| GTGAGATTAAAGATTCCAAA+AGG | - | chr1_4:36079978-36079997 | Msa0161240:CDS | 30.0% | |
| ! | GTTTGAGTAATAAGTCCTTT+TGG | + | chr1_4:36079996-36080015 | None:intergenic | 30.0% |
| ! | ATTCGAGTCAAACATTTTTC+AGG | - | chr1_4:36080109-36080128 | Msa0161240:CDS | 30.0% |
| !!! | TTTTGATTTGAATGAGCTAC+CGG | - | chr1_4:36080133-36080152 | Msa0161240:CDS | 30.0% |
| ACTCTCATCACAAACCAAAA+AGG | - | chr1_4:36072911-36072930 | Msa0161240:CDS | 35.0% | |
| ! | TGATCAACAACACTCCTTTT+TGG | + | chr1_4:36072928-36072947 | None:intergenic | 35.0% |
| !! | AAAAGGAGTGTTGTTGATCA+TGG | - | chr1_4:36072928-36072947 | Msa0161240:CDS | 35.0% |
| TCTTCGAAGTCAAACCATAT+TGG | + | chr1_4:36073176-36073195 | None:intergenic | 35.0% | |
| ! | ATATGGTTTGACTTCGAAGA+AGG | - | chr1_4:36073176-36073195 | Msa0161240:CDS | 35.0% |
| ! | TATGGTTTGACTTCGAAGAA+GGG | - | chr1_4:36073177-36073196 | Msa0161240:CDS | 35.0% |
| TTCTTGGTCACATAACTCAT+TGG | + | chr1_4:36073261-36073280 | None:intergenic | 35.0% | |
| TGAGTTATGTGACCAAGAAA+CGG | - | chr1_4:36073262-36073281 | Msa0161240:CDS | 35.0% | |
| GATCAAACTTTGCAGAAATG+TGG | - | chr1_4:36073392-36073411 | Msa0161240:CDS | 35.0% | |
| ! | CAATGAAAAGAACAAGTTGG+TGG | - | chr1_4:36073503-36073522 | Msa0161240:CDS | 35.0% |
| ATCATTGGAAGCAGATTGAT+TGG | + | chr1_4:36073577-36073596 | None:intergenic | 35.0% | |
| AATGAAGAGAACAACAACAC+TGG | - | chr1_4:36073600-36073619 | Msa0161240:CDS | 35.0% | |
| !! | TGAAGTTGATGAAGCATATG+AGG | - | chr1_4:36073662-36073681 | Msa0161240:intron | 35.0% |
| TTTAACCCCAATTCATGAGT+TGG | + | chr1_4:36073690-36073709 | None:intergenic | 35.0% | |
| CAAAAAGAAACACTAATGGG+CGG | + | chr1_4:36073769-36073788 | None:intergenic | 35.0% | |
| AAGATTCAGACAGATCCAAA+AGG | + | chr1_4:36074033-36074052 | None:intergenic | 35.0% | |
| ! | CATTGAAGTGTTTCTTAGCT+TGG | + | chr1_4:36074533-36074552 | None:intergenic | 35.0% |
| ! | ATGACAAATAATGGTGGTGA+TGG | - | chr1_4:36074550-36074569 | Msa0161240:intron | 35.0% |
| !!! | CGACTTCGTTGATTTTCTTA+TGG | + | chr1_4:36074670-36074689 | None:intergenic | 35.0% |
| GTAAATCTATCATCTGATGC+TGG | + | chr1_4:36074706-36074725 | None:intergenic | 35.0% | |
| GAAACTTTGCATAGAAGAAG+AGG | - | chr1_4:36074811-36074830 | Msa0161240:intron | 35.0% | |
| !! | AGAAATCTTTGACTTGCAGA+AGG | - | chr1_4:36074868-36074887 | Msa0161240:intron | 35.0% |
| TGATATTGCCCCATAATTGA+AGG | - | chr1_4:36074909-36074928 | Msa0161240:intron | 35.0% | |
| AAGTTTCCACCTCTATTTAC+TGG | - | chr1_4:36075047-36075066 | Msa0161240:intron | 35.0% | |
| ! | ACTGGTGACTAATTTTTGAC+GGG | - | chr1_4:36075065-36075084 | Msa0161240:intron | 35.0% |
| TTATCAATTCTCAAGAGTCG+GGG | - | chr1_4:36075133-36075152 | Msa0161240:intron | 35.0% | |
| CACTTTGCAAATGCAACATT+TGG | - | chr1_4:36075346-36075365 | Msa0161240:intron | 35.0% | |
| !! | CACACATTTTCTAGAGAGAA+GGG | + | chr1_4:36075463-36075482 | None:intergenic | 35.0% |
| AAGGGTGAAGAGATAGTTTA+GGG | + | chr1_4:36075568-36075587 | None:intergenic | 35.0% | |
| AAAGGGTGAAGAGATAGTTT+AGG | + | chr1_4:36075569-36075588 | None:intergenic | 35.0% | |
| TTGGTGAGTGAGAAAGAAAA+TGG | + | chr1_4:36075593-36075612 | None:intergenic | 35.0% | |
| ! | GCTTAACTGTTTTCGGATTT+GGG | + | chr1_4:36075731-36075750 | None:intergenic | 35.0% |
| ! | AGCTTAACTGTTTTCGGATT+TGG | + | chr1_4:36075732-36075751 | None:intergenic | 35.0% |
| ATATGATATCCTAACCATGG+TGG | + | chr1_4:36075813-36075832 | None:intergenic | 35.0% | |
| TCATATAGATCTCAGGTTTG+AGG | - | chr1_4:36075827-36075846 | Msa0161240:intron | 35.0% | |
| TGGATCTAAGAATTTGTCCT+TGG | - | chr1_4:36075974-36075993 | Msa0161240:intron | 35.0% | |
| GGATCTAAGAATTTGTCCTT+GGG | - | chr1_4:36075975-36075994 | Msa0161240:intron | 35.0% | |
| CCAAAAGACATAAACCTCTT+GGG | + | chr1_4:36076096-36076115 | None:intergenic | 35.0% | |
| TCCAAAAGACATAAACCTCT+TGG | + | chr1_4:36076097-36076116 | None:intergenic | 35.0% | |
| ACAAAGTAGCTAGTGTTTGT+TGG | - | chr1_4:36076117-36076136 | Msa0161240:intron | 35.0% | |
| AATAGAGAGGTTGTTGCAAT+GGG | + | chr1_4:36076180-36076199 | None:intergenic | 35.0% | |
| GAAATTATCCGTAACTGGAT+TGG | - | chr1_4:36076281-36076300 | Msa0161240:intron | 35.0% | |
| ! | CTGGATTGGAAAAAAAACTG+TGG | - | chr1_4:36076295-36076314 | Msa0161240:intron | 35.0% |
| !! | TGATGTTGGTTTGTTGTTCT+TGG | - | chr1_4:36076369-36076388 | Msa0161240:intron | 35.0% |
| !! | TTGGTTTGTTGTTCTTGGTT+TGG | - | chr1_4:36076374-36076393 | Msa0161240:intron | 35.0% |
| !! | TTGGTTTGGTTATGTCACTT+TGG | - | chr1_4:36076388-36076407 | Msa0161240:intron | 35.0% |
| !! | CTTTGATTTTCGACAATGGA+TGG | - | chr1_4:36076466-36076485 | Msa0161240:intron | 35.0% |
| ! | TTGATTTTCGACAATGGATG+GGG | - | chr1_4:36076468-36076487 | Msa0161240:intron | 35.0% |
| GCACTATTTGCCACAATTTA+AGG | - | chr1_4:36076598-36076617 | Msa0161240:intron | 35.0% | |
| CTATTTGCCACAATTTAAGG+AGG | - | chr1_4:36076601-36076620 | Msa0161240:intron | 35.0% | |
| ATTTGGCAATGGAATTTCGA+TGG | + | chr1_4:36077051-36077070 | None:intergenic | 35.0% | |
| ! | ATTGGTTCTCTACAAGCTAT+TGG | - | chr1_4:36077148-36077167 | Msa0161240:intron | 35.0% |
| !! | AGAGAGTATCACCATATGTT+AGG | + | chr1_4:36077843-36077862 | None:intergenic | 35.0% |
| AAGAAGTAAGTGAGAGATAC+AGG | - | chr1_4:36078011-36078030 | Msa0161240:intron | 35.0% | |
| AGAAGTAAGTGAGAGATACA+GGG | - | chr1_4:36078012-36078031 | Msa0161240:intron | 35.0% | |
| ! | AGTCTATGACGTTTTCAAAG+TGG | - | chr1_4:36078277-36078296 | Msa0161240:intron | 35.0% |
| ! | GTAGTCCCACATTTTTACAA+TGG | - | chr1_4:36078320-36078339 | Msa0161240:intron | 35.0% |
| TTCTCATATTCTGCAACACT+CGG | - | chr1_4:36078798-36078817 | Msa0161240:intron | 35.0% | |
| CTCACTCAAAAATGGGTATA+AGG | + | chr1_4:36078848-36078867 | None:intergenic | 35.0% | |
| TTGATGTAGGCGTGTATAAA+AGG | + | chr1_4:36079215-36079234 | None:intergenic | 35.0% | |
| !! | TAAGAAAGTTGTTGGTGCTA+TGG | + | chr1_4:36079530-36079549 | None:intergenic | 35.0% |
| AGCACCAACAACTTTCTTAA+AGG | - | chr1_4:36079531-36079550 | Msa0161240:CDS | 35.0% | |
| AAAGACAAACATGCTGATGA+TGG | - | chr1_4:36079564-36079583 | Msa0161240:CDS | 35.0% | |
| !! | GCTGATGATGGTATTAAGAT+CGG | - | chr1_4:36079576-36079595 | Msa0161240:CDS | 35.0% |
| TGTTGCAAAGAACACATGAA+TGG | + | chr1_4:36079608-36079627 | None:intergenic | 35.0% | |
| TTCATGTGTTCTTTGCAACA+AGG | - | chr1_4:36079608-36079627 | Msa0161240:intron | 35.0% | |
| CTTTGAATGGACACATGAAA+TGG | - | chr1_4:36079649-36079668 | Msa0161240:CDS | 35.0% | |
| TACTTTGTCAGATCAATGGA+TGG | + | chr1_4:36079729-36079748 | None:intergenic | 35.0% | |
| TTCTTGGTCTCGTATCTTAT+TGG | + | chr1_4:36079759-36079778 | None:intergenic | 35.0% | |
| TAAGATACGAGACCAAGAAA+CGG | - | chr1_4:36079760-36079779 | Msa0161240:CDS | 35.0% | |
| TAACATTGCTGAAACAATGG+TGG | - | chr1_4:36079815-36079834 | Msa0161240:CDS | 35.0% | |
| ACGGTGATTCACATTAAGAT+TGG | + | chr1_4:36079862-36079881 | None:intergenic | 35.0% | |
| ! | GTTTCATCCTTTTACAGTCA+CGG | + | chr1_4:36079881-36079900 | None:intergenic | 35.0% |
| GATGTGAAGATCAATGAACA+AGG | - | chr1_4:36079924-36079943 | Msa0161240:intron | 35.0% | |
| GTTCTCTACATTGTCATCAT+TGG | + | chr1_4:36080045-36080064 | None:intergenic | 35.0% | |
| TCATCTACAACATCATTTGC+CGG | + | chr1_4:36080155-36080174 | None:intergenic | 35.0% | |
| GAAGAAAGTTGTTGCCTCTA+TGG | + | chr1_4:36073029-36073048 | None:intergenic | 40.0% | |
| AGAGGCAACAACTTTCTTCT+AGG | - | chr1_4:36073030-36073049 | Msa0161240:CDS | 40.0% | |
| TCATCTGTCAATGCACTGAA+TGG | - | chr1_4:36073132-36073151 | Msa0161240:CDS | 40.0% | |
| ATGAAATCGCACAGCCAATA+TGG | - | chr1_4:36073159-36073178 | Msa0161240:CDS | 40.0% | |
| GGGTAGTAAGATTTATGACC+TGG | - | chr1_4:36073197-36073216 | Msa0161240:CDS | 40.0% | |
| CAATTGGTGGAAATTGATCC+AGG | + | chr1_4:36073218-36073237 | None:intergenic | 40.0% | |
| TTGGTCACATAACTCATTGG+TGG | + | chr1_4:36073258-36073277 | None:intergenic | 40.0% | |
| ATAATTCCAGCTCCGTTTCT+TGG | + | chr1_4:36073277-36073296 | None:intergenic | 40.0% | |
| TCATGTTGCAAAAGCAATGC+TGG | - | chr1_4:36073314-36073333 | Msa0161240:CDS | 40.0% | |
| GATCACCTAACAACCTTGAT+GGG | - | chr1_4:36073349-36073368 | Msa0161240:CDS | 40.0% | |
| TGATTCCCATCAAGGTTGTT+AGG | + | chr1_4:36073357-36073376 | None:intergenic | 40.0% | |
| ! | GTTTGATCCTTTTCGTGACA+CGG | + | chr1_4:36073380-36073399 | None:intergenic | 40.0% |
| AAACTTTGCAGAAATGTGGG+TGG | - | chr1_4:36073396-36073415 | Msa0161240:CDS | 40.0% | |
| AACTTTGCAGAAATGTGGGT+GGG | - | chr1_4:36073397-36073416 | Msa0161240:CDS | 40.0% | |
| AAGATGAAGATCAGAGAGCA+AGG | - | chr1_4:36073426-36073445 | Msa0161240:CDS | 40.0% | |
| !! | AAAAGAACAAGTTGGTGGTG+AGG | - | chr1_4:36073508-36073527 | Msa0161240:CDS | 40.0% |
| ! | TCAACTTCACCAGTGTTGTT+TGG | + | chr1_4:36073651-36073670 | None:intergenic | 40.0% |
| TGAGGAACCAACTCATGAAT+TGG | - | chr1_4:36073680-36073699 | Msa0161240:intron | 40.0% | |
| GAGGAACCAACTCATGAATT+GGG | - | chr1_4:36073681-36073700 | Msa0161240:intron | 40.0% | |
| AGGAACCAACTCATGAATTG+GGG | - | chr1_4:36073682-36073701 | Msa0161240:intron | 40.0% | |
| !! | ATGTTGATGGCTGAAGTTCA+TGG | - | chr1_4:36074129-36074148 | Msa0161240:intron | 40.0% |
| !! | AATGGTGGTGATGGAAATGA+TGG | - | chr1_4:36074559-36074578 | Msa0161240:intron | 40.0% |
| TAGTCACCAGTAAATAGAGG+TGG | + | chr1_4:36075056-36075075 | None:intergenic | 40.0% | |
| ! | CTGGTGACTAATTTTTGACG+GGG | - | chr1_4:36075066-36075085 | Msa0161240:intron | 40.0% |
| ! | ATTTTTGACGGGGAATCTGT+TGG | - | chr1_4:36075076-36075095 | Msa0161240:intron | 40.0% |
| ! | TTTTTGACGGGGAATCTGTT+GGG | - | chr1_4:36075077-36075096 | Msa0161240:intron | 40.0% |
| AACCTTTCACCACTTGCTTA+AGG | - | chr1_4:36075160-36075179 | Msa0161240:intron | 40.0% | |
| ACCTTTCACCACTTGCTTAA+GGG | - | chr1_4:36075161-36075180 | Msa0161240:intron | 40.0% | |
| ACTTAGATCCCTTAAGCAAG+TGG | + | chr1_4:36075172-36075191 | None:intergenic | 40.0% | |
| CTGCACACATATATTGTCTC+TGG | - | chr1_4:36075260-36075279 | Msa0161240:intron | 40.0% | |
| !! | CCACACATTTTCTAGAGAGA+AGG | + | chr1_4:36075464-36075483 | None:intergenic | 40.0% |
| ! | CCTTCTCTCTAGAAAATGTG+TGG | - | chr1_4:36075461-36075480 | Msa0161240:intron | 40.0% |
| TATTTCCCTCCTCTTGTAGT+AGG | - | chr1_4:36075528-36075547 | Msa0161240:intron | 40.0% | |
| GAGATAGTTTAGGGGAAAAG+AGG | + | chr1_4:36075559-36075578 | None:intergenic | 40.0% | |
| AGGGTGAAGAGATAGTTTAG+GGG | + | chr1_4:36075567-36075586 | None:intergenic | 40.0% | |
| CAACCATTTGGATTGTTTCG+TGG | + | chr1_4:36075689-36075708 | None:intergenic | 40.0% | |
| AGACAAACGTGACAACCATT+TGG | + | chr1_4:36075701-36075720 | None:intergenic | 40.0% | |
| !! | ACTGTTTTCGGATTTGGGAT+GGG | + | chr1_4:36075726-36075745 | None:intergenic | 40.0% |
| ! | AACTGTTTTCGGATTTGGGA+TGG | + | chr1_4:36075727-36075746 | None:intergenic | 40.0% |
| ! | GGAGCAAGCTTAACTGTTTT+CGG | + | chr1_4:36075738-36075757 | None:intergenic | 40.0% |
| ! | CCAGCAAGTTAAGCTCTTTT+GGG | + | chr1_4:36075949-36075968 | None:intergenic | 40.0% |
| ! | ACCAGCAAGTTAAGCTCTTT+TGG | + | chr1_4:36075950-36075969 | None:intergenic | 40.0% |
| !! | AGCTTAACTTGCTGGTTGTT+TGG | - | chr1_4:36075954-36075973 | Msa0161240:intron | 40.0% |
| GTTTGACAAAAAGACCCAAG+AGG | - | chr1_4:36076079-36076098 | Msa0161240:intron | 40.0% | |
| ! | CCCAAGAGGTTTATGTCTTT+TGG | - | chr1_4:36076093-36076112 | Msa0161240:intron | 40.0% |
| TTGGCAATCCATAGAGACTA+AGG | - | chr1_4:36076136-36076155 | Msa0161240:intron | 40.0% | |
| ATAGAGAGGTTGTTGCAATG+GGG | + | chr1_4:36076179-36076198 | None:intergenic | 40.0% | |
| GAATAGAGAGGTTGTTGCAA+TGG | + | chr1_4:36076181-36076200 | None:intergenic | 40.0% | |
| ! | TTTTCCAGATGTTTGAGAGC+TGG | + | chr1_4:36076209-36076228 | None:intergenic | 40.0% |
| TCGCACATTTCGACTATCAT+TGG | + | chr1_4:36076249-36076268 | None:intergenic | 40.0% | |
| ATTCTCTTCCCTATATTGCC+AGG | - | chr1_4:36076318-36076337 | Msa0161240:intron | 40.0% | |
| GAGGTTGAATGAACTGATGT+TGG | - | chr1_4:36076355-36076374 | Msa0161240:intron | 40.0% | |
| ! | CAGGTTGAGACACTTGAATT+GGG | + | chr1_4:36076499-36076518 | None:intergenic | 40.0% |
| ! | ACAGGTTGAGACACTTGAAT+TGG | + | chr1_4:36076500-36076519 | None:intergenic | 40.0% |
| GTGATACATGATCTGGAAGT+TGG | + | chr1_4:36076835-36076854 | None:intergenic | 40.0% | |
| ! | AAAAGTGCATTTGACGGCTA+GGG | + | chr1_4:36076869-36076888 | None:intergenic | 40.0% |
| ! | TAAAAGTGCATTTGACGGCT+AGG | + | chr1_4:36076870-36076889 | None:intergenic | 40.0% |
| !! | AGCTCAAAGTGGGTTAGTAA+TGG | + | chr1_4:36077261-36077280 | None:intergenic | 40.0% |
| TTTGCATGGAAGCTCAAAGT+GGG | + | chr1_4:36077271-36077290 | None:intergenic | 40.0% | |
| ATTTGCATGGAAGCTCAAAG+TGG | + | chr1_4:36077272-36077291 | None:intergenic | 40.0% | |
| GAAGATTAAAATGGGCGTCT+CGG | + | chr1_4:36078214-36078233 | None:intergenic | 40.0% | |
| GACTTAACAAATAGGGACGT+TGG | + | chr1_4:36078411-36078430 | None:intergenic | 40.0% | |
| GGGTCTACTCACTCAAAAAT+GGG | + | chr1_4:36078855-36078874 | None:intergenic | 40.0% | |
| TGGGTCTACTCACTCAAAAA+TGG | + | chr1_4:36078856-36078875 | None:intergenic | 40.0% | |
| TGTGCTAGAGAATTCACAAC+TGG | - | chr1_4:36079477-36079496 | Msa0161240:CDS | 40.0% | |
| !! | TGGTGCTATGGAATTGTTTG+TGG | + | chr1_4:36079518-36079537 | None:intergenic | 40.0% |
| GCAAAGAACACATGAATGGT+TGG | + | chr1_4:36079604-36079623 | None:intergenic | 40.0% | |
| ATGAAATGGCACAGCCAAAA+TGG | - | chr1_4:36079663-36079682 | Msa0161240:CDS | 40.0% | |
| AGCCAAAATGGTTCGAAGAA+GGG | - | chr1_4:36079675-36079694 | Msa0161240:CDS | 40.0% | |
| ! | TACCCTTCTTCGAACCATTT+TGG | + | chr1_4:36079680-36079699 | None:intergenic | 40.0% |
| CAATGGATGGAAACTGATCT+AGG | + | chr1_4:36079716-36079735 | None:intergenic | 40.0% | |
| TTGGTCTCGTATCTTATTGG+TGG | + | chr1_4:36079756-36079775 | None:intergenic | 40.0% | |
| TGAATCACCGTGACTGTAAA+AGG | - | chr1_4:36079871-36079890 | Msa0161240:CDS | 40.0% | |
| GTGAAGATCAATGAACAAGG+TGG | - | chr1_4:36079927-36079946 | Msa0161240:intron | 40.0% | |
| ! | CAATGAAAAGAACAGGTTGG+TGG | - | chr1_4:36079956-36079975 | Msa0161240:CDS | 40.0% |
| CTCTACATTGTCATCATTGG+AGG | + | chr1_4:36080042-36080061 | None:intergenic | 40.0% | |
| GTAGAGAACAATACCGATGA+AGG | - | chr1_4:36080056-36080075 | Msa0161240:CDS | 40.0% | |
| TACCGATGAAGGTGATGAAA+CGG | - | chr1_4:36080067-36080086 | Msa0161240:CDS | 40.0% | |
| ATCCGTTTCATCACCTTCAT+CGG | + | chr1_4:36080072-36080091 | None:intergenic | 40.0% | |
| ATGAAGGTGATGAAACGGAT+GGG | - | chr1_4:36080072-36080091 | Msa0161240:CDS | 40.0% | |
| TGTGACAGAGAATTCACCAC+TGG | - | chr1_4:36072976-36072995 | Msa0161240:CDS | 45.0% | |
| TGCCTCTATGGAATGCTTTG+TGG | + | chr1_4:36073017-36073036 | None:intergenic | 45.0% | |
| GCAACGAACACATGAATGGT+TGG | + | chr1_4:36073100-36073119 | None:intergenic | 45.0% | |
| TGCTGCAACGAACACATGAA+TGG | + | chr1_4:36073104-36073123 | None:intergenic | 45.0% | |
| CGATCACCTAACAACCTTGA+TGG | - | chr1_4:36073348-36073367 | Msa0161240:CDS | 45.0% | |
| ACTGGTGAAGATGATGAAGC+AGG | - | chr1_4:36073618-36073637 | Msa0161240:CDS | 45.0% | |
| TGAAGATGATGAAGCAGGTG+AGG | - | chr1_4:36073623-36073642 | Msa0161240:CDS | 45.0% | |
| TCATCTGCATCATCATCCAC+TGG | + | chr1_4:36073744-36073763 | None:intergenic | 45.0% | |
| TCCCTTAAGCAAGTGGTGAA+AGG | + | chr1_4:36075165-36075184 | None:intergenic | 45.0% | |
| AAATACCACCAAAGAGGTGG+GGG | + | chr1_4:36075513-36075532 | None:intergenic | 45.0% | |
| GAAATACCACCAAAGAGGTG+GGG | + | chr1_4:36075514-36075533 | None:intergenic | 45.0% | |
| GGAAATACCACCAAAGAGGT+GGG | + | chr1_4:36075515-36075534 | None:intergenic | 45.0% | |
| ATGCTCCTACTACAAGAGGA+GGG | + | chr1_4:36075536-36075555 | None:intergenic | 45.0% | |
| TGGTGGGGAAGAAAGATCTT+TGG | + | chr1_4:36075612-36075631 | None:intergenic | 45.0% | |
| CCATTTGGATTGTTTCGTGG+CGG | + | chr1_4:36075686-36075705 | None:intergenic | 45.0% | |
| !! | TGTTTTCGGATTTGGGATGG+GGG | + | chr1_4:36075724-36075743 | None:intergenic | 45.0% |
| !! | CTGTTTTCGGATTTGGGATG+GGG | + | chr1_4:36075725-36075744 | None:intergenic | 45.0% |
| ! | CAGTTAAGCTTGCTCCTTCA+TGG | - | chr1_4:36075742-36075761 | Msa0161240:intron | 45.0% |
| !!! | ACCATGGTGGTTTTGATGGA+GGG | + | chr1_4:36075800-36075819 | None:intergenic | 45.0% |
| !!! | AACCATGGTGGTTTTGATGG+AGG | + | chr1_4:36075801-36075820 | None:intergenic | 45.0% |
| !!! | CCTAACCATGGTGGTTTTGA+TGG | + | chr1_4:36075804-36075823 | None:intergenic | 45.0% |
| CCATCAAAACCACCATGGTT+AGG | - | chr1_4:36075801-36075820 | Msa0161240:intron | 45.0% | |
| !! | CCCAAAAGAGCTTAACTTGC+TGG | - | chr1_4:36075946-36075965 | Msa0161240:intron | 45.0% |
| GGAAGCTTCCTTAGTCTCTA+TGG | + | chr1_4:36076147-36076166 | None:intergenic | 45.0% | |
| TAGAGAGGTTGTTGCAATGG+GGG | + | chr1_4:36076178-36076197 | None:intergenic | 45.0% | |
| TTCCCTATATTGCCAGGTTC+TGG | - | chr1_4:36076324-36076343 | Msa0161240:intron | 45.0% | |
| TCCCTATATTGCCAGGTTCT+GGG | - | chr1_4:36076325-36076344 | Msa0161240:intron | 45.0% | |
| ACCCAGAACCTGGCAATATA+GGG | + | chr1_4:36076329-36076348 | None:intergenic | 45.0% | |
| AACCCAGAACCTGGCAATAT+AGG | + | chr1_4:36076330-36076349 | None:intergenic | 45.0% | |
| TGCCACAATTTAAGGAGGTG+TGG | - | chr1_4:36076606-36076625 | Msa0161240:intron | 45.0% | |
| AGCCACACCTCCTTAAATTG+TGG | + | chr1_4:36076611-36076630 | None:intergenic | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr1_4:36076618-36076637 | Msa0161240:intron | 45.0% |
| GGCAATGGAATTTCGATGGA+TGG | + | chr1_4:36077047-36077066 | None:intergenic | 45.0% | |
| TGGGTTCGAAACTTGTGACA+TGG | + | chr1_4:36077316-36077335 | None:intergenic | 45.0% | |
| ATAGGGACGTTGGATGAGAA+TGG | + | chr1_4:36078401-36078420 | None:intergenic | 45.0% | |
| ! | TTCACAACTGGTAATGCCCT+CGG | - | chr1_4:36079489-36079508 | Msa0161240:CDS | 45.0% |
| CAGCCAAAATGGTTCGAAGA+AGG | - | chr1_4:36079674-36079693 | Msa0161240:CDS | 45.0% | |
| ATAATCCCAGCTCCGTTTCT+TGG | + | chr1_4:36079775-36079794 | None:intergenic | 45.0% | |
| ACATTGTCATCATTGGAGGC+AGG | + | chr1_4:36080038-36080057 | None:intergenic | 45.0% | |
| GATGAAGGTGATGAAACGGA+TGG | - | chr1_4:36080071-36080090 | Msa0161240:CDS | 45.0% | |
| TGAAGGTGATGAAACGGATG+GGG | - | chr1_4:36080073-36080092 | Msa0161240:CDS | 45.0% | |
| !! | AAGAAAATAAAAAAAAAATA+CGG | - | chr1_4:36078771-36078790 | Msa0161240:intron | 5.0% |
| ! | GGCCACAAAGCATTCCATAG+AGG | - | chr1_4:36073012-36073031 | Msa0161240:CDS | 50.0% |
| ATGTGACCAAGAAACGGAGC+TGG | - | chr1_4:36073268-36073287 | Msa0161240:CDS | 50.0% | |
| TGACACGGTGATTCCCATCA+AGG | + | chr1_4:36073365-36073384 | None:intergenic | 50.0% | |
| GGAATCACCGTGTCACGAAA+AGG | - | chr1_4:36073370-36073389 | Msa0161240:CDS | 50.0% | |
| TGCAGAAATGTGGGTGGGAT+TGG | - | chr1_4:36073402-36073421 | Msa0161240:CDS | 50.0% | |
| GCAGAAATGTGGGTGGGATT+GGG | - | chr1_4:36073403-36073422 | Msa0161240:CDS | 50.0% | |
| GGTGAGGAACCAAACAACAC+TGG | - | chr1_4:36073639-36073658 | Msa0161240:intron | 50.0% | |
| CGATTTGAATGAGCTGCCAG+TGG | - | chr1_4:36073725-36073744 | Msa0161240:intron | 50.0% | |
| !! | TTGACTTGCAGAAGGCTGTG+AGG | - | chr1_4:36074876-36074895 | Msa0161240:intron | 50.0% |
| GGGAATCTGTTGGGATCACA+AGG | - | chr1_4:36075086-36075105 | Msa0161240:intron | 50.0% | |
| GGGAAATACCACCAAAGAGG+TGG | + | chr1_4:36075516-36075535 | None:intergenic | 50.0% | |
| GGAGGGAAATACCACCAAAG+AGG | + | chr1_4:36075519-36075538 | None:intergenic | 50.0% | |
| GATGCTCCTACTACAAGAGG+AGG | + | chr1_4:36075537-36075556 | None:intergenic | 50.0% | |
| GAGGATGCTCCTACTACAAG+AGG | + | chr1_4:36075540-36075559 | None:intergenic | 50.0% | |
| TTTGGATTGTTTCGTGGCGG+TGG | + | chr1_4:36075683-36075702 | None:intergenic | 50.0% | |
| CCGCCACGAAACAATCCAAA+TGG | - | chr1_4:36075683-36075702 | Msa0161240:intron | 50.0% | |
| GAATTTGTCCTTGGGCGCTT+CGG | - | chr1_4:36075983-36076002 | Msa0161240:intron | 50.0% | |
| TCGGATCTGATTTCTGCTGC+TGG | - | chr1_4:36076002-36076021 | Msa0161240:intron | 50.0% | |
| AGAGACTAAGGAAGCTTCCG+AGG | - | chr1_4:36076148-36076167 | Msa0161240:intron | 50.0% | |
| ! | GAGCTGGTGGATGAATAGAG+AGG | + | chr1_4:36076193-36076212 | None:intergenic | 50.0% |
| TCCACCAGCTCTCAAACATC+TGG | - | chr1_4:36076202-36076221 | Msa0161240:intron | 50.0% | |
| TCCAGATGTTTGAGAGCTGG+TGG | + | chr1_4:36076206-36076225 | None:intergenic | 50.0% | |
| ! | TTCACCACTGGTAACGCCCT+CGG | - | chr1_4:36072988-36073007 | Msa0161240:CDS | 55.0% |
| AAACCCACCATGAAGGAGGG+GGG | + | chr1_4:36075490-36075509 | None:intergenic | 55.0% | |
| GAAACCCACCATGAAGGAGG+GGG | + | chr1_4:36075491-36075510 | None:intergenic | 55.0% | |
| GGAAACCCACCATGAAGGAG+GGG | + | chr1_4:36075492-36075511 | None:intergenic | 55.0% | |
| GGGAAACCCACCATGAAGGA+GGG | + | chr1_4:36075493-36075512 | None:intergenic | 55.0% | |
| GATCTTTCTTCCCCACCACC+AGG | - | chr1_4:36075614-36075633 | Msa0161240:intron | 55.0% | |
| CATCGGCGGGAAGGAAATCT+TGG | + | chr1_4:36075645-36075664 | None:intergenic | 55.0% | |
| ATTGTTTCGTGGCGGTGGCT+CGG | + | chr1_4:36075678-36075697 | None:intergenic | 55.0% | |
| !! | GGTTTTGATGGAGGGCAGGT+GGG | + | chr1_4:36075792-36075811 | None:intergenic | 55.0% |
| !!! | TGGTTTTGATGGAGGGCAGG+TGG | + | chr1_4:36075793-36075812 | None:intergenic | 55.0% |
| !!! | TGGTGGTTTTGATGGAGGGC+AGG | + | chr1_4:36075796-36075815 | None:intergenic | 55.0% |
| GCCCTCCATCAAAACCACCA+TGG | - | chr1_4:36075796-36075815 | Msa0161240:intron | 55.0% | |
| ! | AATCAGATCCGAAGCGCCCA+AGG | + | chr1_4:36075994-36076013 | None:intergenic | 55.0% |
| ACTAAGGAAGCTTCCGAGGC+TGG | - | chr1_4:36076152-36076171 | Msa0161240:intron | 55.0% | |
| CCTCTTGCAAACCCAGAACC+TGG | + | chr1_4:36076339-36076358 | None:intergenic | 55.0% | |
| !! | CCAGGTTCTGGGTTTGCAAG+AGG | - | chr1_4:36076336-36076355 | Msa0161240:intron | 55.0% |
| ! | ACAACTGGTAATGCCCTCGG+CGG | - | chr1_4:36079492-36079511 | Msa0161240:CDS | 55.0% |
| GAATTGTTTGTGGCCGCCGA+GGG | + | chr1_4:36079508-36079527 | None:intergenic | 55.0% | |
| ACGAGACCAAGAAACGGAGC+TGG | - | chr1_4:36079766-36079785 | Msa0161240:CDS | 55.0% | |
| CGAGACCAAGAAACGGAGCT+GGG | - | chr1_4:36079767-36079786 | Msa0161240:CDS | 55.0% | |
| GAATGCTTTGTGGCCGCCGA+GGG | + | chr1_4:36073007-36073026 | None:intergenic | 60.0% | |
| GGGGAAACCCACCATGAAGG+AGG | + | chr1_4:36075494-36075513 | None:intergenic | 60.0% | |
| GTGGGGGAAACCCACCATGA+AGG | + | chr1_4:36075497-36075516 | None:intergenic | 60.0% | |
| GTGGGTTTCCCCCACCTCTT+TGG | - | chr1_4:36075502-36075521 | Msa0161240:intron | 60.0% | |
| GGTTTCCCCCACCTCTTTGG+TGG | - | chr1_4:36075505-36075524 | Msa0161240:intron | 60.0% | |
| AAGGAAATCTTGGCGGCGCC+TGG | + | chr1_4:36075635-36075654 | None:intergenic | 60.0% | |
| CGGCGGGAAGGAAATCTTGG+CGG | + | chr1_4:36075642-36075661 | None:intergenic | 60.0% | |
| TTGTTTCGTGGCGGTGGCTC+GGG | + | chr1_4:36075677-36075696 | None:intergenic | 60.0% | |
| TGGGATGCACCATGAGGGTG+GGG | + | chr1_4:36075773-36075792 | None:intergenic | 60.0% | |
| GTGGGATGCACCATGAGGGT+GGG | + | chr1_4:36075774-36075793 | None:intergenic | 60.0% | |
| GCAGGTGGGATGCACCATGA+GGG | + | chr1_4:36075778-36075797 | None:intergenic | 60.0% | |
| GGAATTGTTTGTGGCCGCCG+AGG | + | chr1_4:36079509-36079528 | None:intergenic | 60.0% | |
| ! | ACCACTGGTAACGCCCTCGG+CGG | - | chr1_4:36072991-36073010 | Msa0161240:CDS | 65.0% |
| GGAATGCTTTGTGGCCGCCG+AGG | + | chr1_4:36073008-36073027 | None:intergenic | 65.0% | |
| GAAATCTTGGCGGCGCCTGG+TGG | + | chr1_4:36075632-36075651 | None:intergenic | 65.0% | |
| AGGGTGGGGAGCAGCCATGA+AGG | + | chr1_4:36075759-36075778 | None:intergenic | 65.0% | |
| ATGGCTGCTCCCCACCCTCA+TGG | - | chr1_4:36075761-36075780 | Msa0161240:intron | 65.0% | |
| GGTGGGATGCACCATGAGGG+TGG | + | chr1_4:36075775-36075794 | None:intergenic | 65.0% | |
| GGCAGGTGGGATGCACCATG+AGG | + | chr1_4:36075779-36075798 | None:intergenic | 65.0% | |
| GTTGCAATGGGGGCCAGCCT+CGG | + | chr1_4:36076168-36076187 | None:intergenic | 65.0% | |
| CCCACCATGAAGGAGGGGGG+CGG | + | chr1_4:36075487-36075506 | None:intergenic | 70.0% | |
| CCGCCCCCCTCCTTCATGGT+GGG | - | chr1_4:36075484-36075503 | Msa0161240:intron | 70.0% | |
| TCTTGGCGGCGCCTGGTGGT+GGG | + | chr1_4:36075628-36075647 | None:intergenic | 70.0% | |
| ATCTTGGCGGCGCCTGGTGG+TGG | + | chr1_4:36075629-36075648 | None:intergenic | 70.0% | |
| ! | TGGTGGTCGCATCGGCGGGA+AGG | + | chr1_4:36075654-36075673 | None:intergenic | 70.0% |
| ! | TCGGGTGGTGGTCGCATCGG+CGG | + | chr1_4:36075659-36075678 | None:intergenic | 70.0% |
| ! | GGCTCGGGTGGTGGTCGCAT+CGG | + | chr1_4:36075662-36075681 | None:intergenic | 70.0% |
| ! | TTTCGTGGCGGTGGCTCGGG+TGG | + | chr1_4:36075674-36075693 | None:intergenic | 70.0% |
| !! | GCCGCCGAGGGCGTTACCAG+TGG | + | chr1_4:36072995-36073014 | None:intergenic | 75.0% |
| GTGGCCGCCCCCCTCCTTCA+TGG | - | chr1_4:36075480-36075499 | Msa0161240:intron | 75.0% | |
| GCCGCCCCCCTCCTTCATGG+TGG | - | chr1_4:36075483-36075502 | Msa0161240:intron | 75.0% | |
| ! | CTTGGCGGCGCCTGGTGGTG+GGG | + | chr1_4:36075627-36075646 | None:intergenic | 75.0% |
| ! | CGGGTGGTGGTCGCATCGGC+GGG | + | chr1_4:36075658-36075677 | None:intergenic | 75.0% |
| !! | CGTGGCGGTGGCTCGGGTGG+TGG | + | chr1_4:36075671-36075690 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 36072871 | 36080187 | 36072871 | ID=Msa0161240;Name=Msa0161240 |
| chr1_4 | mRNA | 36072871 | 36080187 | 36072871 | ID=Msa0161240-mRNA-1;Parent=Msa0161240;Name=Msa0161240-mRNA-1;_AED=0.07;_eAED=0.16;_QI=0|0|0|1|0|0|5|0|509 |
| chr1_4 | exon | 36079948 | 36080187 | 36079948 | ID=Msa0161240-mRNA-1:exon:10706;Parent=Msa0161240-mRNA-1 |
| chr1_4 | exon | 36079860 | 36079936 | 36079860 | ID=Msa0161240-mRNA-1:exon:10705;Parent=Msa0161240-mRNA-1 |
| chr1_4 | exon | 36079644 | 36079855 | 36079644 | ID=Msa0161240-mRNA-1:exon:10704;Parent=Msa0161240-mRNA-1 |
| chr1_4 | exon | 36079393 | 36079610 | 36079393 | ID=Msa0161240-mRNA-1:exon:10703;Parent=Msa0161240-mRNA-1 |
| chr1_4 | exon | 36072871 | 36073653 | 36072871 | ID=Msa0161240-mRNA-1:exon:10702;Parent=Msa0161240-mRNA-1 |
| chr1_4 | CDS | 36079948 | 36080187 | 36079948 | ID=Msa0161240-mRNA-1:cds;Parent=Msa0161240-mRNA-1 |
| chr1_4 | CDS | 36079860 | 36079936 | 36079860 | ID=Msa0161240-mRNA-1:cds;Parent=Msa0161240-mRNA-1 |
| chr1_4 | CDS | 36079644 | 36079855 | 36079644 | ID=Msa0161240-mRNA-1:cds;Parent=Msa0161240-mRNA-1 |
| chr1_4 | CDS | 36079393 | 36079610 | 36079393 | ID=Msa0161240-mRNA-1:cds;Parent=Msa0161240-mRNA-1 |
| chr1_4 | CDS | 36072871 | 36073653 | 36072871 | ID=Msa0161240-mRNA-1:cds;Parent=Msa0161240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
