Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161280 | A0A072VU80 | 43.777 | 233 | 112 | 5 | 18 | 243 | 16 | 236 | 2.51e-35 | 142 |
| Msa0161280 | A0A072VU80 | 71.315 | 251 | 43 | 5 | 250 | 491 | 16 | 246 | 5.51e-108 | 331 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0161280 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161280 | MtrunA17_Chr1g0174861 | 71.315 | 251 | 43 | 5 | 250 | 491 | 16 | 246 | 1.06e-111 | 331 |
| Msa0161280 | MtrunA17_Chr1g0174861 | 43.777 | 233 | 112 | 5 | 18 | 243 | 16 | 236 | 4.84e-39 | 142 |
| Msa0161280 | MtrunA17_Chr1g0174871 | 60.153 | 261 | 85 | 7 | 265 | 509 | 28 | 285 | 1.62e-85 | 265 |
| Msa0161280 | MtrunA17_Chr1g0174871 | 62.868 | 272 | 80 | 5 | 1 | 256 | 1 | 267 | 1.62e-84 | 263 |
| Msa0161280 | MtrunA17_Chr1g0169521 | 35.135 | 296 | 136 | 9 | 259 | 508 | 30 | 315 | 5.68e-38 | 141 |
| Msa0161280 | MtrunA17_Chr1g0169561 | 34.680 | 297 | 134 | 8 | 259 | 507 | 30 | 314 | 7.86e-38 | 141 |
| Msa0161280 | MtrunA17_Chr1g0174001 | 39.500 | 200 | 87 | 7 | 337 | 508 | 1 | 194 | 3.31e-27 | 108 |
| Msa0161280 | MtrunA17_Chr1g0172961 | 34.711 | 242 | 121 | 9 | 259 | 469 | 23 | 258 | 2.66e-26 | 107 |
| Msa0161280 | MtrunA17_Chr1g0172961 | 28.947 | 228 | 131 | 10 | 28 | 227 | 30 | 254 | 7.40e-12 | 65.9 |
| Msa0161280 | MtrunA17_Chr1g0172861 | 31.522 | 276 | 135 | 12 | 259 | 503 | 23 | 275 | 8.60e-23 | 98.2 |
| Msa0161280 | MtrunA17_Chr7g0214511 | 35.849 | 212 | 99 | 8 | 318 | 508 | 91 | 286 | 9.03e-23 | 98.2 |
| Msa0161280 | MtrunA17_Chr4g0037041 | 43.307 | 127 | 54 | 5 | 258 | 375 | 22 | 139 | 4.62e-20 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 94 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGGTCTCGTATCTTAT+TGG | 0.208428 | 1_4:+36140209 | None:intergenic |
| AGCACCAACAACTTTCTTAA+AGG | 0.236987 | 1_4:-36140434 | Msa0161280:CDS |
| TACCCTTCTTCGAACCATTT+TGG | 0.254107 | 1_4:+36140288 | None:intergenic |
| ATAATTCCAGCTCCGTTTCT+TGG | 0.269877 | 1_4:+36146693 | None:intergenic |
| ATAATCCCAGCTCCGTTTCT+TGG | 0.287583 | 1_4:+36140193 | None:intergenic |
| GAAGAAAGTTGTTGCCTCTA+TGG | 0.295075 | 1_4:+36146941 | None:intergenic |
| AGAGGCAACAACTTTCTTCT+AGG | 0.323367 | 1_4:-36146937 | Msa0161280:CDS |
| ATGAAATGGCACAGCCAAAA+TGG | 0.332105 | 1_4:-36140302 | Msa0161280:CDS |
| GTTCTCTACATTGTCATCAT+TGG | 0.335954 | 1_4:+36139923 | None:intergenic |
| GTTTGAGTAATAAGTCCTTT+TGG | 0.343516 | 1_4:+36139972 | None:intergenic |
| TGAATCACCGTGACTGTAAA+AGG | 0.346155 | 1_4:-36140094 | Msa0161280:CDS |
| GTTCTCTTCATTATCATCAT+TGG | 0.362989 | 1_4:+36146378 | None:intergenic |
| TCTTCGAAGTCGAACCATAT+TGG | 0.367921 | 1_4:+36146794 | None:intergenic |
| ATGAAATCGCACAGCCAATA+TGG | 0.368027 | 1_4:-36146808 | Msa0161280:CDS |
| ACTCTCATATCAAACCAAAA+AGG | 0.373200 | 1_4:-36147056 | Msa0161280:CDS |
| TCAACTTCACCAGTGTTGTT+TGG | 0.375897 | 1_4:+36146319 | None:intergenic |
| ATCATTGGAAGCAGATTGAT+TGG | 0.381296 | 1_4:+36146393 | None:intergenic |
| CAAATTTAAACGCTAAATAG+TGG | 0.394892 | 1_4:+36139788 | None:intergenic |
| TGATTCCCATCAAGGTTGTT+AGG | 0.398895 | 1_4:+36146613 | None:intergenic |
| AAATACTTTCTCAAATCAAT+TGG | 0.400225 | 1_4:+36146736 | None:intergenic |
| CGATCACCTAACAACCTTGA+TGG | 0.406250 | 1_4:-36146619 | Msa0161280:CDS |
| CTTTGAATGAACACATGAAA+TGG | 0.407566 | 1_4:-36140316 | Msa0161280:CDS |
| TTTACCTTTAAGAAAGTTGT+TGG | 0.419418 | 1_4:+36140430 | None:intergenic |
| TGCCTCTATGGAATGCTTTG+TGG | 0.438332 | 1_4:+36146953 | None:intergenic |
| TCATCTACAACATCATTTGC+CGG | 0.440063 | 1_4:+36139813 | None:intergenic |
| TAAGAAAGTTGTTGGTGCTA+TGG | 0.440297 | 1_4:+36140438 | None:intergenic |
| TTCTTGGTCACATAACTCAT+TGG | 0.463818 | 1_4:+36146709 | None:intergenic |
| TCATGTTGCAAAAGCAATGC+TGG | 0.472244 | 1_4:-36146653 | Msa0161280:CDS |
| CTCTACATTGTCATCATTGG+AGG | 0.472478 | 1_4:+36139926 | None:intergenic |
| TTGGTCTCGTATCTTATTGG+TGG | 0.473127 | 1_4:+36140212 | None:intergenic |
| ACGGTGATTCACATTAAGAT+TGG | 0.473501 | 1_4:+36140106 | None:intergenic |
| CAATGGATGGAAACTGATCT+AGG | 0.474117 | 1_4:+36140252 | None:intergenic |
| ATCCGTTTCATCACCTTCAT+CGG | 0.483860 | 1_4:+36139896 | None:intergenic |
| TGGTGCTATGGAATTGTTTG+TGG | 0.484496 | 1_4:+36140450 | None:intergenic |
| TACTTTCTCAAATCAATTGG+TGG | 0.486384 | 1_4:+36146739 | None:intergenic |
| CAGCCAAAATGGTTCGAAGA+AGG | 0.488255 | 1_4:-36140291 | Msa0161280:CDS |
| TGTGACAGAGAATTCACAAC+TGG | 0.492142 | 1_4:-36146991 | Msa0161280:CDS |
| TGTGCTAGAGAATTCACAAC+TGG | 0.492819 | 1_4:-36140488 | Msa0161280:CDS |
| GAATGCTTTGTGGCCGCCGA+GGG | 0.493083 | 1_4:+36146963 | None:intergenic |
| CAAATACTTTGTCAGATCAA+TGG | 0.494617 | 1_4:+36140235 | None:intergenic |
| GAATTGTTTGTGGCCGCCGA+GGG | 0.497780 | 1_4:+36140460 | None:intergenic |
| CAATTGGTGGAAATTGATCC+AGG | 0.509751 | 1_4:+36146752 | None:intergenic |
| GGAATCACCGTGTCACGAAA+AGG | 0.512728 | 1_4:-36146597 | Msa0161280:CDS |
| TACCGATGAAGGTGATGAAA+CGG | 0.519602 | 1_4:-36139898 | Msa0161280:CDS |
| GATCAAACTTTGCAGAAATG+TGG | 0.524856 | 1_4:-36146575 | Msa0161280:CDS |
| TGACACGGTGATTCCCATCA+AGG | 0.527477 | 1_4:+36146605 | None:intergenic |
| ATATGGTTCGACTTCGAAGA+AGG | 0.528018 | 1_4:-36146791 | Msa0161280:CDS |
| GTGAGATTAAAGATTCCAAA+AGG | 0.530313 | 1_4:-36139987 | Msa0161280:CDS |
| TTGGTCACATAACTCATTGG+TGG | 0.531076 | 1_4:+36146712 | None:intergenic |
| ACGAGACCAAGAAACGGAGC+TGG | 0.539882 | 1_4:-36140199 | Msa0161280:CDS |
| AAAGACAAACATGCTGATGA+TGG | 0.542758 | 1_4:-36140401 | Msa0161280:CDS |
| ACATTGTCATCATTGGAGGC+AGG | 0.544139 | 1_4:+36139930 | None:intergenic |
| GATCACCTAACAACCTTGAT+GGG | 0.547419 | 1_4:-36146618 | Msa0161280:CDS |
| ATCAAACTTTGCAGAAATGT+GGG | 0.554714 | 1_4:-36146574 | Msa0161280:intron |
| TGTTAACATTGCTGAAACAA+TGG | 0.555726 | 1_4:-36140153 | Msa0161280:CDS |
| GGAATTGTTTGTGGCCGCCG+AGG | 0.556033 | 1_4:+36140459 | None:intergenic |
| TTCACAACTGGTAATGCCCT+CGG | 0.558819 | 1_4:-36140476 | Msa0161280:CDS |
| TGAGTTATGTGACCAAGAAA+CGG | 0.560971 | 1_4:-36146705 | Msa0161280:CDS |
| AGCCAAAATGGTTCGAAGAA+GGG | 0.561339 | 1_4:-36140290 | Msa0161280:CDS |
| ATGAAGGTGATGAAACGGAT+GGG | 0.561647 | 1_4:-36139893 | Msa0161280:CDS |
| AAAAGGAGTGTTGTTGATCA+TGG | 0.562216 | 1_4:-36147039 | Msa0161280:CDS |
| TTCACAACTGGTAACGCCCT+CGG | 0.563147 | 1_4:-36146979 | Msa0161280:CDS |
| GGGTAGTAAGATTTATGACC+TGG | 0.563188 | 1_4:-36146770 | Msa0161280:intron |
| GCTGATGATGGTATTAAGAT+CGG | 0.564146 | 1_4:-36140389 | Msa0161280:CDS |
| AAACAATGAAAAGAACAAGT+TGG | 0.564169 | 1_4:-36146467 | Msa0161280:CDS |
| GTAGAGAACAATACCGATGA+AGG | 0.568109 | 1_4:-36139909 | Msa0161280:CDS |
| TTCATGTGTTCTTTGCAACA+AGG | 0.570989 | 1_4:-36140357 | Msa0161280:CDS |
| TCATCTGTCAATGCTCTCAA+CGG | 0.584629 | 1_4:-36146835 | Msa0161280:CDS |
| GGAATGCTTTGTGGCCGCCG+AGG | 0.588007 | 1_4:+36146962 | None:intergenic |
| CGAGACCAAGAAACGGAGCT+GGG | 0.594941 | 1_4:-36140198 | Msa0161280:CDS |
| AAAAGAACAAGTTGGTGGTG+AGG | 0.597114 | 1_4:-36146459 | Msa0161280:CDS |
| ATGTGACCAAGAAACGGAGC+TGG | 0.597485 | 1_4:-36146699 | Msa0161280:CDS |
| CAATGAAAAGAACAGGTTGG+TGG | 0.599420 | 1_4:-36140009 | Msa0161280:CDS |
| TATGGTTCGACTTCGAAGAA+GGG | 0.600043 | 1_4:-36146790 | Msa0161280:intron |
| TACTTTGTCAGATCAATGGA+TGG | 0.603001 | 1_4:+36140239 | None:intergenic |
| TGAAGGTGATGAAACGGATG+GGG | 0.603593 | 1_4:-36139892 | Msa0161280:CDS |
| TAAGATACGAGACCAAGAAA+CGG | 0.610128 | 1_4:-36140205 | Msa0161280:CDS |
| GCAAAGAACACATGAATGGT+TGG | 0.613792 | 1_4:+36140364 | None:intergenic |
| GATGAAGGTGATGAAACGGA+TGG | 0.616100 | 1_4:-36139894 | Msa0161280:CDS |
| CAATGAAAAGAACAAGTTGG+TGG | 0.617009 | 1_4:-36146464 | Msa0161280:CDS |
| AAACAATGAAAAGAACAGGT+TGG | 0.620052 | 1_4:-36140012 | Msa0161280:CDS |
| TGTTGCAAAGAACACATGAA+TGG | 0.632355 | 1_4:+36140360 | None:intergenic |
| GGCCACAAAGCATTCCATAG+AGG | 0.645608 | 1_4:-36146955 | Msa0161280:CDS |
| ACTGGTGAAGATGATGAAGC+AGG | 0.649250 | 1_4:-36146349 | Msa0161280:CDS |
| TGCTGCAACGAACACATGAA+TGG | 0.655011 | 1_4:+36146866 | None:intergenic |
| AATGAAGAGAACAACAACAC+TGG | 0.663304 | 1_4:-36146367 | Msa0161280:CDS |
| GGTGAGGAACCAAACAACAC+TGG | 0.673005 | 1_4:-36146328 | Msa0161280:CDS |
| TAACATTGCTGAAACAATGG+TGG | 0.675593 | 1_4:-36140150 | Msa0161280:CDS |
| TGAAGATGATGAAGCAGGTG+AGG | 0.685127 | 1_4:-36146344 | Msa0161280:CDS |
| ACAACTGGTAATGCCCTCGG+CGG | 0.704742 | 1_4:-36140473 | Msa0161280:CDS |
| ACAACTGGTAACGCCCTCGG+CGG | 0.717230 | 1_4:-36146976 | Msa0161280:CDS |
| GAAAATGAGAAACATCAACA+AGG | 0.726705 | 1_4:-36140536 | Msa0161280:CDS |
| GATGTGAAGATCAATGAACA+AGG | 0.760498 | 1_4:-36140041 | Msa0161280:CDS |
| GTGAAGATCAATGAACAAGG+TGG | 0.773369 | 1_4:-36140038 | Msa0161280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATAACTATTTTTTTGTT+TGG | - | chr1_4:36141223-36141242 | Msa0161280:intron | 10.0% |
| !! | TAAAGTGTAAAATAAATATT+TGG | + | chr1_4:36144000-36144019 | None:intergenic | 10.0% |
| !!! | TTTTATCAGTTTAATTTATT+TGG | - | chr1_4:36144273-36144292 | Msa0161280:intron | 10.0% |
| !!! | ATATATATATTTTTGATGAA+TGG | + | chr1_4:36145488-36145507 | None:intergenic | 10.0% |
| !! | AGAAAATAAAAAAAAAATAC+GGG | - | chr1_4:36145703-36145722 | Msa0161280:intron | 10.0% |
| !!! | AATAAAAGTTTTTTTTTTGA+AGG | + | chr1_4:36145885-36145904 | None:intergenic | 10.0% |
| !! | TCTTATAAATGAATATTAAA+CGG | - | chr1_4:36145973-36145992 | Msa0161280:intron | 10.0% |
| !! | AATTACGTAATAATTTAATT+TGG | + | chr1_4:36146066-36146085 | None:intergenic | 10.0% |
| !!! | TATTACGTAATTTTTTTTTA+AGG | - | chr1_4:36146074-36146093 | Msa0161280:intron | 10.0% |
| !! | AGAATTGATAAAATTTAGTT+GGG | + | chr1_4:36142057-36142076 | None:intergenic | 15.0% |
| !!! | TCTTTGTTTATTTTGTTTTA+AGG | - | chr1_4:36142975-36142994 | Msa0161280:intron | 15.0% |
| !! | TATTAAAAATTCACATTGAA+TGG | - | chr1_4:36143698-36143717 | Msa0161280:intron | 15.0% |
| !! | TATTTGTAAAAGATTCAATT+GGG | + | chr1_4:36145182-36145201 | None:intergenic | 15.0% |
| !! | ATATTTGTAAAAGATTCAAT+TGG | + | chr1_4:36145183-36145202 | None:intergenic | 15.0% |
| !!! | AAGATTTTTTTTTTTTTGAG+AGG | - | chr1_4:36145304-36145323 | Msa0161280:intron | 15.0% |
| !! | TAATAGAATAAATGAGAATA+AGG | - | chr1_4:36145513-36145532 | Msa0161280:intron | 15.0% |
| !! | AATAGAATAAATGAGAATAA+GGG | - | chr1_4:36145514-36145533 | Msa0161280:intron | 15.0% |
| !! | TTTCTCATAAATTATTAAGA+TGG | - | chr1_4:36145578-36145597 | Msa0161280:intron | 15.0% |
| !!! | TATTAATAGGGTTTTTTTAT+TGG | + | chr1_4:36146176-36146195 | None:intergenic | 15.0% |
| !! | AAACATAAATGAAAAGATAT+CGG | + | chr1_4:36146207-36146226 | None:intergenic | 15.0% |
| !! | AAATACTTTCTCAAATCAAT+TGG | + | chr1_4:36140163-36140182 | None:intergenic | 20.0% |
| !! | AAACAAAAAGAAACACTAAT+GGG | + | chr1_4:36140701-36140720 | None:intergenic | 20.0% |
| !! | AAAACAAAAAGAAACACTAA+TGG | + | chr1_4:36140702-36140721 | None:intergenic | 20.0% |
| !! | TTCAAATTAGTGTGAAAATA+TGG | - | chr1_4:36141029-36141048 | Msa0161280:intron | 20.0% |
| !!! | AATCTTCTGTATTTTTCAAA+TGG | + | chr1_4:36141097-36141116 | None:intergenic | 20.0% |
| !! | TCCATGAATAATAAATTTGA+GGG | - | chr1_4:36141120-36141139 | Msa0161280:intron | 20.0% |
| !!! | CATAAAAAGACTAGTTATTA+GGG | + | chr1_4:36141170-36141189 | None:intergenic | 20.0% |
| !!! | TCATAAAAAGACTAGTTATT+AGG | + | chr1_4:36141171-36141190 | None:intergenic | 20.0% |
| !!! | AATTGACTTGAAAATATTTC+AGG | - | chr1_4:36141334-36141353 | Msa0161280:intron | 20.0% |
| !! | TTCAATCTAAGTTATCTATA+GGG | - | chr1_4:36141869-36141888 | Msa0161280:intron | 20.0% |
| !! | GAGAATTGATAAAATTTAGT+TGG | + | chr1_4:36142058-36142077 | None:intergenic | 20.0% |
| !! | TTTGATATATTGTCTTTCTT+TGG | - | chr1_4:36142217-36142236 | Msa0161280:intron | 20.0% |
| !!! | GCTCTTTTTTTTTTTTTTGA+CGG | + | chr1_4:36143497-36143516 | None:intergenic | 20.0% |
| !! | GATTTAGTTGTTTATACATA+CGG | + | chr1_4:36143663-36143682 | None:intergenic | 20.0% |
| !! | GTAAAATAAATATTTGGCAA+TGG | + | chr1_4:36143994-36144013 | None:intergenic | 20.0% |
| !! | TTATTTATTTGACAAGCTAT+TGG | - | chr1_4:36144062-36144081 | Msa0161280:intron | 20.0% |
| !! | AAAAAACAAAGATATTTGCA+TGG | + | chr1_4:36144217-36144236 | None:intergenic | 20.0% |
| !! | TTAAACTGATAAAACATTGT+GGG | + | chr1_4:36144267-36144286 | None:intergenic | 20.0% |
| !! | ATTAAACTGATAAAACATTG+TGG | + | chr1_4:36144268-36144287 | None:intergenic | 20.0% |
| !!! | CAACATTTTAAATTTGAGTT+GGG | - | chr1_4:36144368-36144387 | Msa0161280:intron | 20.0% |
| !!! | AACATTTTAAATTTGAGTTG+GGG | - | chr1_4:36144369-36144388 | Msa0161280:intron | 20.0% |
| !! | TAGATTACACCATAAAAAAT+TGG | - | chr1_4:36144444-36144463 | Msa0161280:intron | 20.0% |
| !!! | TGACCAAATTTTTTATTTCT+TGG | + | chr1_4:36144503-36144522 | None:intergenic | 20.0% |
| !!! | TAGTAGTACTTATTTTGTTT+TGG | - | chr1_4:36144552-36144571 | Msa0161280:intron | 20.0% |
| !! | ACTAAAAAACAAATTAAGTG+TGG | + | chr1_4:36144644-36144663 | None:intergenic | 20.0% |
| !! | GTTATTTACACACAATATTT+GGG | + | chr1_4:36144984-36145003 | None:intergenic | 20.0% |
| !!! | TGTTATTTACACACAATATT+TGG | + | chr1_4:36144985-36145004 | None:intergenic | 20.0% |
| !! | ATTGTAAATAAAGTCGAAAA+TGG | - | chr1_4:36145119-36145138 | Msa0161280:intron | 20.0% |
| !! | ACAATTGTGAAGATTAAAAT+GGG | + | chr1_4:36145154-36145173 | None:intergenic | 20.0% |
| !! | AACAATTGTGAAGATTAAAA+TGG | + | chr1_4:36145155-36145174 | None:intergenic | 20.0% |
| !!! | TCTTAATTTTATTTCCTGTT+TGG | + | chr1_4:36145552-36145571 | None:intergenic | 20.0% |
| !!! | ATCAACTTTTCTTTTTCTTT+TGG | + | chr1_4:36145626-36145645 | None:intergenic | 20.0% |
| !!! | TAGTGAGACTTATTTTAATT+AGG | - | chr1_4:36145819-36145838 | Msa0161280:intron | 20.0% |
| !! | TTTATAAGAGAGATATACAT+TGG | + | chr1_4:36145962-36145981 | None:intergenic | 20.0% |
| !! | TATAAATGAATATTAAACGG+CGG | - | chr1_4:36145976-36145995 | Msa0161280:intron | 20.0% |
| !! | AACATAAATGAAAAGATATC+GGG | + | chr1_4:36146206-36146225 | None:intergenic | 20.0% |
| ! | AAACAATGAAAAGAACAAGT+TGG | - | chr1_4:36140429-36140448 | Msa0161280:CDS | 25.0% |
| !!! | TTCTTTTTGTTTTCAAGTGA+AGG | - | chr1_4:36140709-36140728 | Msa0161280:intron | 25.0% |
| !!! | AGAATGAAATTCTGCTATTT+TGG | - | chr1_4:36140794-36140813 | Msa0161280:intron | 25.0% |
| !! | GTTAATCTATTTTCACCTTT+TGG | - | chr1_4:36140944-36140963 | Msa0161280:intron | 25.0% |
| ! | GTCCATGAATAATAAATTTG+AGG | - | chr1_4:36141119-36141138 | Msa0161280:intron | 25.0% |
| ! | ACCCTCAAATTTATTATTCA+TGG | + | chr1_4:36141124-36141143 | None:intergenic | 25.0% |
| !! | TAGTTATTAGGGCATTAAAT+TGG | + | chr1_4:36141159-36141178 | None:intergenic | 25.0% |
| ! | ATGAATTGAATTGAATGTAG+AGG | - | chr1_4:36141187-36141206 | Msa0161280:intron | 25.0% |
| ! | AACACTTCAATGACAAATAA+TGG | - | chr1_4:36141474-36141493 | Msa0161280:intron | 25.0% |
| !! | ATTTTCTATTGTACTTAGCT+AGG | + | chr1_4:36141538-36141557 | None:intergenic | 25.0% |
| !! | GTTGTCATTTCACTAATTAT+TGG | + | chr1_4:36141565-36141584 | None:intergenic | 25.0% |
| ! | ATCAGATGATAGATTTACTA+AGG | - | chr1_4:36141641-36141660 | Msa0161280:intron | 25.0% |
| ! | TCAGATGATAGATTTACTAA+GGG | - | chr1_4:36141642-36141661 | Msa0161280:intron | 25.0% |
| ! | TAGAAGAATAATTCTCTAGT+GGG | - | chr1_4:36141717-36141736 | Msa0161280:intron | 25.0% |
| ! | TTGAAGAAACCTTCAATTAT+GGG | + | chr1_4:36141854-36141873 | None:intergenic | 25.0% |
| ! | ATTGAAGAAACCTTCAATTA+TGG | + | chr1_4:36141855-36141874 | None:intergenic | 25.0% |
| ! | CTTCAATCTAAGTTATCTAT+AGG | - | chr1_4:36141868-36141887 | Msa0161280:intron | 25.0% |
| !!! | TTATTGCCCTTCATATTTTT+TGG | - | chr1_4:36141937-36141956 | Msa0161280:intron | 25.0% |
| ! | TGGAATCCAAAAAATATGAA+GGG | + | chr1_4:36141946-36141965 | None:intergenic | 25.0% |
| ! | TTGGAATCCAAAAAATATGA+AGG | + | chr1_4:36141947-36141966 | None:intergenic | 25.0% |
| ! | TTGATAAAATTTAGTTGGGA+GGG | + | chr1_4:36142053-36142072 | None:intergenic | 25.0% |
| ! | ATTGATAAAATTTAGTTGGG+AGG | + | chr1_4:36142054-36142073 | None:intergenic | 25.0% |
| !! | TTTTATCAATTCTCAAGAGT+CGG | - | chr1_4:36142064-36142083 | Msa0161280:intron | 25.0% |
| ! | TGAATTAATTTCAGTGGAAA+AGG | + | chr1_4:36142128-36142147 | None:intergenic | 25.0% |
| ! | CAACAATGAATTAATTTCAG+TGG | + | chr1_4:36142134-36142153 | None:intergenic | 25.0% |
| !!! | AATTTTGATGTACAAAACGA+AGG | + | chr1_4:36142167-36142186 | None:intergenic | 25.0% |
| !!! | TTGTTTTAAGTATGTCTTCA+TGG | - | chr1_4:36142840-36142859 | Msa0161280:intron | 25.0% |
| !!! | TTTTTTTTCCAATCCAGTTA+CGG | + | chr1_4:36143224-36143243 | None:intergenic | 25.0% |
| ! | AAACAAGAAACAATACAAAC+AGG | + | chr1_4:36143450-36143469 | None:intergenic | 25.0% |
| ! | ATATTTAGTGATACATGATC+TGG | + | chr1_4:36143774-36143793 | None:intergenic | 25.0% |
| !! | AAAACTAAAAGTGCATTTGA+CGG | + | chr1_4:36143807-36143826 | None:intergenic | 25.0% |
| !!! | TCAAATGCACTTTTAGTTTT+AGG | - | chr1_4:36143807-36143826 | Msa0161280:intron | 25.0% |
| !!! | CACTTTTAGTTTTAGGTTTT+TGG | - | chr1_4:36143814-36143833 | Msa0161280:intron | 25.0% |
| ! | CAAAAGATATTTGCTTGAAA+AGG | + | chr1_4:36144150-36144169 | None:intergenic | 25.0% |
| ! | AATGGATAACATAATACGAA+TGG | + | chr1_4:36144175-36144194 | None:intergenic | 25.0% |
| !! | GCAACATTTTAAATTTGAGT+TGG | - | chr1_4:36144367-36144386 | Msa0161280:intron | 25.0% |
| ! | GAGCCAAGAAATAAAAAATT+TGG | - | chr1_4:36144497-36144516 | Msa0161280:intron | 25.0% |
| !!! | ATTTTGTTTTGGCAATAAGA+TGG | - | chr1_4:36144563-36144582 | Msa0161280:intron | 25.0% |
| ! | TAAGTGTGGTAAATTATAAG+TGG | + | chr1_4:36144630-36144649 | None:intergenic | 25.0% |
| !!! | TCTTTTTCGACAAAAACATA+TGG | - | chr1_4:36144710-36144729 | Msa0161280:intron | 25.0% |
| !!! | ACTCTTTTTTTCCTAACATA+TGG | - | chr1_4:36144761-36144780 | Msa0161280:intron | 25.0% |
| ! | TTATTGAGTTAAATCAACGT+AGG | + | chr1_4:36144855-36144874 | None:intergenic | 25.0% |
| ! | CATTTCCTTTCAAATTTCTT+AGG | - | chr1_4:36145029-36145048 | Msa0161280:intron | 25.0% |
| !!! | GACTTTTGACTTAACAAATA+GGG | + | chr1_4:36145349-36145368 | None:intergenic | 25.0% |
| !!! | TGACTTTTGACTTAACAAAT+AGG | + | chr1_4:36145350-36145369 | None:intergenic | 25.0% |
| !!! | GGAATTTTTTTTTACCAAAC+AGG | - | chr1_4:36145535-36145554 | Msa0161280:intron | 25.0% |
| !! | ACTTTTCTTTTTCTTTTGGT+TGG | + | chr1_4:36145622-36145641 | None:intergenic | 25.0% |
| ! | CTCACTAATCTATATCATAT+GGG | + | chr1_4:36145806-36145825 | None:intergenic | 25.0% |
| ! | TCTCACTAATCTATATCATA+TGG | + | chr1_4:36145807-36145826 | None:intergenic | 25.0% |
| ! | AAGTTATTACGTCATTTAGT+AGG | - | chr1_4:36146098-36146117 | Msa0161280:intron | 25.0% |
| ! | TATTGGAAAATGTTTGATGT+AGG | + | chr1_4:36146159-36146178 | None:intergenic | 25.0% |
| ! | TTAGTGCAATGAAATTGAAA+GGG | + | chr1_4:36146244-36146263 | None:intergenic | 25.0% |
| ! | ATTAGTGCAATGAAATTGAA+AGG | + | chr1_4:36146245-36146264 | None:intergenic | 25.0% |
| !! | ATTTTCATGATCAACAACAT+TGG | + | chr1_4:36146346-36146365 | None:intergenic | 25.0% |
| !! | TTTACCTTTAAGAAAGTTGT+TGG | + | chr1_4:36146469-36146488 | None:intergenic | 25.0% |
| ! | GTAAAAACAATGAAAAGAAC+AGG | - | chr1_4:36146880-36146899 | Msa0161280:CDS | 25.0% |
| ACTCTCATATCAAACCAAAA+AGG | - | chr1_4:36139840-36139859 | Msa0161280:CDS | 30.0% | |
| AACAAAGAAAAACAAGCTGA+TGG | - | chr1_4:36139989-36140008 | Msa0161280:CDS | 30.0% | |
| TACTTTCTCAAATCAATTGG+TGG | + | chr1_4:36140160-36140179 | None:intergenic | 30.0% | |
| ATCAAACTTTGCAGAAATGT+GGG | - | chr1_4:36140322-36140341 | Msa0161280:CDS | 30.0% | |
| ! | TTTTGAATGACAAGGCTATT+CGG | + | chr1_4:36140472-36140491 | None:intergenic | 30.0% |
| ! | CTTGTGATTTTTGAATGACA+AGG | + | chr1_4:36140480-36140499 | None:intergenic | 30.0% |
| GTTCTCTTCATTATCATCAT+TGG | + | chr1_4:36140521-36140540 | None:intergenic | 30.0% | |
| !!! | ATGAAATTCTGCTATTTTGG+TGG | - | chr1_4:36140797-36140816 | Msa0161280:intron | 30.0% |
| TTGTTGTGATAATTTCATCG+TGG | - | chr1_4:36140862-36140881 | Msa0161280:intron | 30.0% | |
| AATATGGAGTTGAATGTTGA+TGG | - | chr1_4:36141045-36141064 | Msa0161280:intron | 30.0% | |
| ACTTCAATGACAAATAATGG+TGG | - | chr1_4:36141477-36141496 | Msa0161280:intron | 30.0% | |
| TTTGATTGTAACTACTCTTG+TGG | - | chr1_4:36141681-36141700 | Msa0161280:intron | 30.0% | |
| GTAGAAGAATAATTCTCTAG+TGG | - | chr1_4:36141716-36141735 | Msa0161280:intron | 30.0% | |
| AGAAGAATAATTCTCTAGTG+GGG | - | chr1_4:36141718-36141737 | Msa0161280:intron | 30.0% | |
| TTCAAGAATGAGTACAAGTA+TGG | + | chr1_4:36141782-36141801 | None:intergenic | 30.0% | |
| AATTATGGGGCAATATCATA+TGG | + | chr1_4:36141840-36141859 | None:intergenic | 30.0% | |
| TGAAGAAACCTTCAATTATG+GGG | + | chr1_4:36141853-36141872 | None:intergenic | 30.0% | |
| ACTCATGAAGTATAACTCTT+TGG | - | chr1_4:36141914-36141933 | Msa0161280:intron | 30.0% | |
| AAACTTCGTAACTTCAACAT+TGG | + | chr1_4:36141966-36141985 | None:intergenic | 30.0% | |
| AATTAGTCACCAGTAAATAG+AGG | + | chr1_4:36141992-36142011 | None:intergenic | 30.0% | |
| ! | TACTGGTGACTAATTTTTGA+CGG | - | chr1_4:36141997-36142016 | Msa0161280:intron | 30.0% |
| TTTATCAATTCTCAAGAGTC+GGG | - | chr1_4:36142065-36142084 | Msa0161280:intron | 30.0% | |
| TGTACAAAACGAAGGAAATT+AGG | + | chr1_4:36142159-36142178 | None:intergenic | 30.0% | |
| CTATGCGTGAATTTATTACT+AGG | + | chr1_4:36142243-36142262 | None:intergenic | 30.0% | |
| CTAGTAATAAATTCACGCAT+AGG | - | chr1_4:36142241-36142260 | Msa0161280:intron | 30.0% | |
| TAGAGCAATGTTATATCTCT+AGG | - | chr1_4:36142314-36142333 | Msa0161280:intron | 30.0% | |
| GTGAGAAAGAAAATGGAAAA+GGG | + | chr1_4:36142518-36142537 | None:intergenic | 30.0% | |
| AGTGAGAAAGAAAATGGAAA+AGG | + | chr1_4:36142519-36142538 | None:intergenic | 30.0% | |
| TCTATATGATATCCTAACCA+TGG | + | chr1_4:36142748-36142767 | None:intergenic | 30.0% | |
| TAGGATATCATATAGATCTC+AGG | - | chr1_4:36142752-36142771 | Msa0161280:intron | 30.0% | |
| TGTTCTACTGCTTTAATGTT+TGG | - | chr1_4:36142791-36142810 | Msa0161280:intron | 30.0% | |
| TCTCAAACATCTGGAAAAAT+TGG | - | chr1_4:36143143-36143162 | Msa0161280:intron | 30.0% | |
| TCAAAGAAATTATCCGTAAC+TGG | - | chr1_4:36143208-36143227 | Msa0161280:intron | 30.0% | |
| !! | TGATCTTTGATTTTCGACAA+TGG | - | chr1_4:36143394-36143413 | Msa0161280:intron | 30.0% |
| !! | TTTGATTTTCGACAATGGAT+GGG | - | chr1_4:36143399-36143418 | Msa0161280:intron | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | + | chr1_4:36143609-36143628 | None:intergenic | 30.0% |
| AATGGAAATAAGAGCTTATC+AGG | - | chr1_4:36143716-36143735 | Msa0161280:intron | 30.0% | |
| GATATTTGCTTGAAAAGGTT+CGG | + | chr1_4:36144145-36144164 | None:intergenic | 30.0% | |
| CTTAAGTACATGCATGATAT+TGG | - | chr1_4:36144309-36144328 | Msa0161280:intron | 30.0% | |
| !! | TATTGGTTTGAAACTAAGCT+TGG | - | chr1_4:36144326-36144345 | Msa0161280:intron | 30.0% |
| !!! | TTGTGCAGACCAATTTTTTA+TGG | + | chr1_4:36144456-36144475 | None:intergenic | 30.0% |
| ! | AGACTAACTTTGAAAAGTTG+TGG | + | chr1_4:36144682-36144701 | None:intergenic | 30.0% |
| !! | TGTTTTTGTCGAAAAAGATG+AGG | + | chr1_4:36144708-36144727 | None:intergenic | 30.0% |
| TCCTTTCAAATTTCTTAGGA+TGG | - | chr1_4:36145033-36145052 | Msa0161280:intron | 30.0% | |
| ACCATCCTAAGAAATTTGAA+AGG | + | chr1_4:36145037-36145056 | None:intergenic | 30.0% | |
| TCAAATTTCTTAGGATGGTA+AGG | - | chr1_4:36145038-36145057 | Msa0161280:intron | 30.0% | |
| TCTCACCATTGTAAAAATGT+GGG | + | chr1_4:36145260-36145279 | None:intergenic | 30.0% | |
| TTCTCACCATTGTAAAAATG+TGG | + | chr1_4:36145261-36145280 | None:intergenic | 30.0% | |
| TTTAATTAGGACGCTGTTAA+TGG | - | chr1_4:36145832-36145851 | Msa0161280:intron | 30.0% | |
| TTAAACGGCGGAAAAATAAA+TGG | - | chr1_4:36145988-36146007 | Msa0161280:intron | 30.0% | |
| TCGGGTATCACTTATTAATA+GGG | + | chr1_4:36146188-36146207 | None:intergenic | 30.0% | |
| ATCGGGTATCACTTATTAAT+AGG | + | chr1_4:36146189-36146208 | None:intergenic | 30.0% | |
| TGAATAGAATGATGAGAAGA+AGG | + | chr1_4:36146309-36146328 | None:intergenic | 30.0% | |
| !!! | TGATCAACAACATTGGTTTT+TGG | + | chr1_4:36146339-36146358 | None:intergenic | 30.0% |
| GAAAATGAGAAACATCAACA+AGG | - | chr1_4:36146360-36146379 | Msa0161280:CDS | 30.0% | |
| CTTTGAATGAACACATGAAA+TGG | - | chr1_4:36146580-36146599 | Msa0161280:CDS | 30.0% | |
| CAAATACTTTGTCAGATCAA+TGG | + | chr1_4:36146664-36146683 | None:intergenic | 30.0% | |
| TGTTAACATTGCTGAAACAA+TGG | - | chr1_4:36146743-36146762 | Msa0161280:CDS | 30.0% | |
| AAACAATGAAAAGAACAGGT+TGG | - | chr1_4:36146884-36146903 | Msa0161280:intron | 30.0% | |
| GTGAGATTAAAGATTCCAAA+AGG | - | chr1_4:36146909-36146928 | Msa0161280:CDS | 30.0% | |
| ! | GTTTGAGTAATAAGTCCTTT+TGG | + | chr1_4:36146927-36146946 | None:intergenic | 30.0% |
| ! | ATTCGAGTCAAACATTTTTC+AGG | - | chr1_4:36147040-36147059 | Msa0161280:CDS | 30.0% |
| !!! | TTTTGATTTGAATGAGCTAC+CGG | - | chr1_4:36147064-36147083 | Msa0161280:CDS | 30.0% |
| ! | TGATCAACAACACTCCTTTT+TGG | + | chr1_4:36139857-36139876 | None:intergenic | 35.0% |
| !! | AAAAGGAGTGTTGTTGATCA+TGG | - | chr1_4:36139857-36139876 | Msa0161280:CDS | 35.0% |
| TTCTTGGTCACATAACTCAT+TGG | + | chr1_4:36140190-36140209 | None:intergenic | 35.0% | |
| TGAGTTATGTGACCAAGAAA+CGG | - | chr1_4:36140191-36140210 | Msa0161280:CDS | 35.0% | |
| GATCAAACTTTGCAGAAATG+TGG | - | chr1_4:36140321-36140340 | Msa0161280:CDS | 35.0% | |
| ! | CAATGAAAAGAACAAGTTGG+TGG | - | chr1_4:36140432-36140451 | Msa0161280:CDS | 35.0% |
| ATCATTGGAAGCAGATTGAT+TGG | + | chr1_4:36140506-36140525 | None:intergenic | 35.0% | |
| AATGAAGAGAACAACAACAC+TGG | - | chr1_4:36140529-36140548 | Msa0161280:CDS | 35.0% | |
| !! | TGAAGTTGATGAAGCATATG+AGG | - | chr1_4:36140591-36140610 | Msa0161280:intron | 35.0% |
| TTTAACCCCAATTCATGAGT+TGG | + | chr1_4:36140619-36140638 | None:intergenic | 35.0% | |
| CAAAAAGAAACACTAATGGG+CGG | + | chr1_4:36140698-36140717 | None:intergenic | 35.0% | |
| AAGATTCAGACAGATCCAAA+AGG | + | chr1_4:36140962-36140981 | None:intergenic | 35.0% | |
| ! | CATTGAAGTGTTTCTTAGCT+TGG | + | chr1_4:36141466-36141485 | None:intergenic | 35.0% |
| ! | ATGACAAATAATGGTGGTGA+TGG | - | chr1_4:36141483-36141502 | Msa0161280:intron | 35.0% |
| !!! | CGACTTCGTTGATTTTCTTA+TGG | + | chr1_4:36141603-36141622 | None:intergenic | 35.0% |
| GTAAATCTATCATCTGATGC+TGG | + | chr1_4:36141639-36141658 | None:intergenic | 35.0% | |
| GAAACTTTGCATAGAAGAAG+AGG | - | chr1_4:36141744-36141763 | Msa0161280:intron | 35.0% | |
| !! | AGAAATCTTTGACTTGCAGA+AGG | - | chr1_4:36141801-36141820 | Msa0161280:intron | 35.0% |
| TGATATTGCCCCATAATTGA+AGG | - | chr1_4:36141842-36141861 | Msa0161280:intron | 35.0% | |
| AAGTTTCCACCTCTATTTAC+TGG | - | chr1_4:36141980-36141999 | Msa0161280:intron | 35.0% | |
| ! | ACTGGTGACTAATTTTTGAC+GGG | - | chr1_4:36141998-36142017 | Msa0161280:intron | 35.0% |
| TTATCAATTCTCAAGAGTCG+GGG | - | chr1_4:36142066-36142085 | Msa0161280:intron | 35.0% | |
| CACTTTGCAAATGCAACATT+TGG | - | chr1_4:36142279-36142298 | Msa0161280:intron | 35.0% | |
| !! | CACACATTTTCTAGAGAGAA+GGG | + | chr1_4:36142396-36142415 | None:intergenic | 35.0% |
| AAGGGTGAAGAGATAGTTTA+GGG | + | chr1_4:36142500-36142519 | None:intergenic | 35.0% | |
| AAAGGGTGAAGAGATAGTTT+AGG | + | chr1_4:36142501-36142520 | None:intergenic | 35.0% | |
| TTGGTGAGTGAGAAAGAAAA+TGG | + | chr1_4:36142525-36142544 | None:intergenic | 35.0% | |
| ! | GCTTAACTGTTTTCGGATTT+GGG | + | chr1_4:36142663-36142682 | None:intergenic | 35.0% |
| ! | AGCTTAACTGTTTTCGGATT+TGG | + | chr1_4:36142664-36142683 | None:intergenic | 35.0% |
| ATATGATATCCTAACCATGG+TGG | + | chr1_4:36142745-36142764 | None:intergenic | 35.0% | |
| TCATATAGATCTCAGGTTTG+AGG | - | chr1_4:36142759-36142778 | Msa0161280:intron | 35.0% | |
| TGGATCTAAGAATTTGTCCT+TGG | - | chr1_4:36142906-36142925 | Msa0161280:intron | 35.0% | |
| GGATCTAAGAATTTGTCCTT+GGG | - | chr1_4:36142907-36142926 | Msa0161280:intron | 35.0% | |
| CCAAAAGACATAAACCTCTT+GGG | + | chr1_4:36143028-36143047 | None:intergenic | 35.0% | |
| TCCAAAAGACATAAACCTCT+TGG | + | chr1_4:36143029-36143048 | None:intergenic | 35.0% | |
| ACAAAGTAGCTAGTGTTTGT+TGG | - | chr1_4:36143049-36143068 | Msa0161280:intron | 35.0% | |
| AATAGAGAGGTTGTTGCAAT+GGG | + | chr1_4:36143112-36143131 | None:intergenic | 35.0% | |
| GAAATTATCCGTAACTGGAT+TGG | - | chr1_4:36143213-36143232 | Msa0161280:intron | 35.0% | |
| ! | CTGGATTGGAAAAAAAACTG+TGG | - | chr1_4:36143227-36143246 | Msa0161280:intron | 35.0% |
| !! | TGATGTTGGTTTGTTGTTCT+TGG | - | chr1_4:36143301-36143320 | Msa0161280:intron | 35.0% |
| !! | TTGGTTTGTTGTTCTTGGTT+TGG | - | chr1_4:36143306-36143325 | Msa0161280:intron | 35.0% |
| !! | TTGGTTTGGTTATGTCACTT+TGG | - | chr1_4:36143320-36143339 | Msa0161280:intron | 35.0% |
| !! | CTTTGATTTTCGACAATGGA+TGG | - | chr1_4:36143398-36143417 | Msa0161280:intron | 35.0% |
| ! | TTGATTTTCGACAATGGATG+GGG | - | chr1_4:36143400-36143419 | Msa0161280:intron | 35.0% |
| GCACTATTTGCCACAATTTA+AGG | - | chr1_4:36143530-36143549 | Msa0161280:intron | 35.0% | |
| CTATTTGCCACAATTTAAGG+AGG | - | chr1_4:36143533-36143552 | Msa0161280:intron | 35.0% | |
| ATTTGGCAATGGAATTTCGA+TGG | + | chr1_4:36143983-36144002 | None:intergenic | 35.0% | |
| ! | ATTGGTTCTCTACAAGCTAT+TGG | - | chr1_4:36144080-36144099 | Msa0161280:intron | 35.0% |
| !! | AGAGAGTATCACCATATGTT+AGG | + | chr1_4:36144775-36144794 | None:intergenic | 35.0% |
| AAGAAGTAAGTGAGAGATAC+AGG | - | chr1_4:36144943-36144962 | Msa0161280:intron | 35.0% | |
| AGAAGTAAGTGAGAGATACA+GGG | - | chr1_4:36144944-36144963 | Msa0161280:intron | 35.0% | |
| ! | AGTCTATGACGTTTTCAAAG+TGG | - | chr1_4:36145209-36145228 | Msa0161280:intron | 35.0% |
| ! | GTAGTCCCACATTTTTACAA+TGG | - | chr1_4:36145252-36145271 | Msa0161280:intron | 35.0% |
| TTCTCATATTCTGCAACACT+CGG | - | chr1_4:36145729-36145748 | Msa0161280:intron | 35.0% | |
| CTCACTCAAAAATGGGTATA+AGG | + | chr1_4:36145779-36145798 | None:intergenic | 35.0% | |
| TTGATGTAGGCGTGTATAAA+AGG | + | chr1_4:36146146-36146165 | None:intergenic | 35.0% | |
| !! | TAAGAAAGTTGTTGGTGCTA+TGG | + | chr1_4:36146461-36146480 | None:intergenic | 35.0% |
| AGCACCAACAACTTTCTTAA+AGG | - | chr1_4:36146462-36146481 | Msa0161280:CDS | 35.0% | |
| AAAGACAAACATGCTGATGA+TGG | - | chr1_4:36146495-36146514 | Msa0161280:CDS | 35.0% | |
| !! | GCTGATGATGGTATTAAGAT+CGG | - | chr1_4:36146507-36146526 | Msa0161280:CDS | 35.0% |
| TGTTGCAAAGAACACATGAA+TGG | + | chr1_4:36146539-36146558 | None:intergenic | 35.0% | |
| TTCATGTGTTCTTTGCAACA+AGG | - | chr1_4:36146539-36146558 | Msa0161280:intron | 35.0% | |
| TACTTTGTCAGATCAATGGA+TGG | + | chr1_4:36146660-36146679 | None:intergenic | 35.0% | |
| TTCTTGGTCTCGTATCTTAT+TGG | + | chr1_4:36146690-36146709 | None:intergenic | 35.0% | |
| TAAGATACGAGACCAAGAAA+CGG | - | chr1_4:36146691-36146710 | Msa0161280:CDS | 35.0% | |
| TAACATTGCTGAAACAATGG+TGG | - | chr1_4:36146746-36146765 | Msa0161280:CDS | 35.0% | |
| ACGGTGATTCACATTAAGAT+TGG | + | chr1_4:36146793-36146812 | None:intergenic | 35.0% | |
| ! | GTTTCATCCTTTTACAGTCA+CGG | + | chr1_4:36146812-36146831 | None:intergenic | 35.0% |
| GATGTGAAGATCAATGAACA+AGG | - | chr1_4:36146855-36146874 | Msa0161280:CDS | 35.0% | |
| GTTCTCTACATTGTCATCAT+TGG | + | chr1_4:36146976-36146995 | None:intergenic | 35.0% | |
| TCATCTACAACATCATTTGC+CGG | + | chr1_4:36147086-36147105 | None:intergenic | 35.0% | |
| TGTGACAGAGAATTCACAAC+TGG | - | chr1_4:36139905-36139924 | Msa0161280:CDS | 40.0% | |
| GAAGAAAGTTGTTGCCTCTA+TGG | + | chr1_4:36139958-36139977 | None:intergenic | 40.0% | |
| AGAGGCAACAACTTTCTTCT+AGG | - | chr1_4:36139959-36139978 | Msa0161280:CDS | 40.0% | |
| TCATCTGTCAATGCTCTCAA+CGG | - | chr1_4:36140061-36140080 | Msa0161280:CDS | 40.0% | |
| ATGAAATCGCACAGCCAATA+TGG | - | chr1_4:36140088-36140107 | Msa0161280:CDS | 40.0% | |
| TCTTCGAAGTCGAACCATAT+TGG | + | chr1_4:36140105-36140124 | None:intergenic | 40.0% | |
| ATATGGTTCGACTTCGAAGA+AGG | - | chr1_4:36140105-36140124 | Msa0161280:CDS | 40.0% | |
| TATGGTTCGACTTCGAAGAA+GGG | - | chr1_4:36140106-36140125 | Msa0161280:CDS | 40.0% | |
| GGGTAGTAAGATTTATGACC+TGG | - | chr1_4:36140126-36140145 | Msa0161280:CDS | 40.0% | |
| CAATTGGTGGAAATTGATCC+AGG | + | chr1_4:36140147-36140166 | None:intergenic | 40.0% | |
| TTGGTCACATAACTCATTGG+TGG | + | chr1_4:36140187-36140206 | None:intergenic | 40.0% | |
| ATAATTCCAGCTCCGTTTCT+TGG | + | chr1_4:36140206-36140225 | None:intergenic | 40.0% | |
| TCATGTTGCAAAAGCAATGC+TGG | - | chr1_4:36140243-36140262 | Msa0161280:CDS | 40.0% | |
| GATCACCTAACAACCTTGAT+GGG | - | chr1_4:36140278-36140297 | Msa0161280:CDS | 40.0% | |
| TGATTCCCATCAAGGTTGTT+AGG | + | chr1_4:36140286-36140305 | None:intergenic | 40.0% | |
| ! | GTTTGATCCTTTTCGTGACA+CGG | + | chr1_4:36140309-36140328 | None:intergenic | 40.0% |
| AAACTTTGCAGAAATGTGGG+TGG | - | chr1_4:36140325-36140344 | Msa0161280:CDS | 40.0% | |
| AACTTTGCAGAAATGTGGGT+GGG | - | chr1_4:36140326-36140345 | Msa0161280:CDS | 40.0% | |
| AAGATGAAGATCAGAGAGCA+AGG | - | chr1_4:36140355-36140374 | Msa0161280:CDS | 40.0% | |
| !! | AAAAGAACAAGTTGGTGGTG+AGG | - | chr1_4:36140437-36140456 | Msa0161280:CDS | 40.0% |
| ! | TCAACTTCACCAGTGTTGTT+TGG | + | chr1_4:36140580-36140599 | None:intergenic | 40.0% |
| TGAGGAACCAACTCATGAAT+TGG | - | chr1_4:36140609-36140628 | Msa0161280:intron | 40.0% | |
| GAGGAACCAACTCATGAATT+GGG | - | chr1_4:36140610-36140629 | Msa0161280:intron | 40.0% | |
| AGGAACCAACTCATGAATTG+GGG | - | chr1_4:36140611-36140630 | Msa0161280:intron | 40.0% | |
| !! | ATGTTGATGGCTGAAGTTCA+TGG | - | chr1_4:36141058-36141077 | Msa0161280:intron | 40.0% |
| !! | AATGGTGGTGATGGAAATGA+TGG | - | chr1_4:36141492-36141511 | Msa0161280:intron | 40.0% |
| TAGTCACCAGTAAATAGAGG+TGG | + | chr1_4:36141989-36142008 | None:intergenic | 40.0% | |
| ! | CTGGTGACTAATTTTTGACG+GGG | - | chr1_4:36141999-36142018 | Msa0161280:intron | 40.0% |
| ! | ATTTTTGACGGGGAATCTGT+TGG | - | chr1_4:36142009-36142028 | Msa0161280:intron | 40.0% |
| ! | TTTTTGACGGGGAATCTGTT+GGG | - | chr1_4:36142010-36142029 | Msa0161280:intron | 40.0% |
| AACCTTTCACCACTTGCTTA+AGG | - | chr1_4:36142093-36142112 | Msa0161280:intron | 40.0% | |
| ACCTTTCACCACTTGCTTAA+GGG | - | chr1_4:36142094-36142113 | Msa0161280:intron | 40.0% | |
| ACTTAGATCCCTTAAGCAAG+TGG | + | chr1_4:36142105-36142124 | None:intergenic | 40.0% | |
| CTGCACACATATATTGTCTC+TGG | - | chr1_4:36142193-36142212 | Msa0161280:intron | 40.0% | |
| !! | CCACACATTTTCTAGAGAGA+AGG | + | chr1_4:36142397-36142416 | None:intergenic | 40.0% |
| ! | CCTTCTCTCTAGAAAATGTG+TGG | - | chr1_4:36142394-36142413 | Msa0161280:intron | 40.0% |
| TATTTCCCTCCTCTTGTAGT+AGG | - | chr1_4:36142460-36142479 | Msa0161280:intron | 40.0% | |
| GAGATAGTTTAGGGGAAAAG+AGG | + | chr1_4:36142491-36142510 | None:intergenic | 40.0% | |
| AGGGTGAAGAGATAGTTTAG+GGG | + | chr1_4:36142499-36142518 | None:intergenic | 40.0% | |
| CAACCATTTGGATTGTTTCG+TGG | + | chr1_4:36142621-36142640 | None:intergenic | 40.0% | |
| AGACAAACGTGACAACCATT+TGG | + | chr1_4:36142633-36142652 | None:intergenic | 40.0% | |
| !! | ACTGTTTTCGGATTTGGGAT+GGG | + | chr1_4:36142658-36142677 | None:intergenic | 40.0% |
| ! | AACTGTTTTCGGATTTGGGA+TGG | + | chr1_4:36142659-36142678 | None:intergenic | 40.0% |
| ! | GGAGCAAGCTTAACTGTTTT+CGG | + | chr1_4:36142670-36142689 | None:intergenic | 40.0% |
| ! | CCAGCAAGTTAAGCTCTTTT+GGG | + | chr1_4:36142881-36142900 | None:intergenic | 40.0% |
| ! | ACCAGCAAGTTAAGCTCTTT+TGG | + | chr1_4:36142882-36142901 | None:intergenic | 40.0% |
| !! | AGCTTAACTTGCTGGTTGTT+TGG | - | chr1_4:36142886-36142905 | Msa0161280:intron | 40.0% |
| GTTTGACAAAAAGACCCAAG+AGG | - | chr1_4:36143011-36143030 | Msa0161280:intron | 40.0% | |
| ! | CCCAAGAGGTTTATGTCTTT+TGG | - | chr1_4:36143025-36143044 | Msa0161280:intron | 40.0% |
| TTGGCAATCCATAGAGACTA+AGG | - | chr1_4:36143068-36143087 | Msa0161280:intron | 40.0% | |
| ATAGAGAGGTTGTTGCAATG+GGG | + | chr1_4:36143111-36143130 | None:intergenic | 40.0% | |
| GAATAGAGAGGTTGTTGCAA+TGG | + | chr1_4:36143113-36143132 | None:intergenic | 40.0% | |
| ! | TTTTCCAGATGTTTGAGAGC+TGG | + | chr1_4:36143141-36143160 | None:intergenic | 40.0% |
| TCGCACATTTCGACTATCAT+TGG | + | chr1_4:36143181-36143200 | None:intergenic | 40.0% | |
| ATTCTCTTCCCTATATTGCC+AGG | - | chr1_4:36143250-36143269 | Msa0161280:intron | 40.0% | |
| GAGGTTGAATGAACTGATGT+TGG | - | chr1_4:36143287-36143306 | Msa0161280:intron | 40.0% | |
| ! | CAGGTTGAGACACTTGAATT+GGG | + | chr1_4:36143431-36143450 | None:intergenic | 40.0% |
| ! | ACAGGTTGAGACACTTGAAT+TGG | + | chr1_4:36143432-36143451 | None:intergenic | 40.0% |
| GTGATACATGATCTGGAAGT+TGG | + | chr1_4:36143767-36143786 | None:intergenic | 40.0% | |
| ! | AAAAGTGCATTTGACGGCTA+GGG | + | chr1_4:36143801-36143820 | None:intergenic | 40.0% |
| ! | TAAAAGTGCATTTGACGGCT+AGG | + | chr1_4:36143802-36143821 | None:intergenic | 40.0% |
| !! | AGCTCAAAGTGGGTTAGTAA+TGG | + | chr1_4:36144193-36144212 | None:intergenic | 40.0% |
| TTTGCATGGAAGCTCAAAGT+GGG | + | chr1_4:36144203-36144222 | None:intergenic | 40.0% | |
| ATTTGCATGGAAGCTCAAAG+TGG | + | chr1_4:36144204-36144223 | None:intergenic | 40.0% | |
| GAAGATTAAAATGGGCGTCT+CGG | + | chr1_4:36145146-36145165 | None:intergenic | 40.0% | |
| GACTTAACAAATAGGGACGT+TGG | + | chr1_4:36145342-36145361 | None:intergenic | 40.0% | |
| GGGTCTACTCACTCAAAAAT+GGG | + | chr1_4:36145786-36145805 | None:intergenic | 40.0% | |
| TGGGTCTACTCACTCAAAAA+TGG | + | chr1_4:36145787-36145806 | None:intergenic | 40.0% | |
| TGTGCTAGAGAATTCACAAC+TGG | - | chr1_4:36146408-36146427 | Msa0161280:CDS | 40.0% | |
| !! | TGGTGCTATGGAATTGTTTG+TGG | + | chr1_4:36146449-36146468 | None:intergenic | 40.0% |
| GCAAAGAACACATGAATGGT+TGG | + | chr1_4:36146535-36146554 | None:intergenic | 40.0% | |
| ATGAAATGGCACAGCCAAAA+TGG | - | chr1_4:36146594-36146613 | Msa0161280:CDS | 40.0% | |
| AGCCAAAATGGTTCGAAGAA+GGG | - | chr1_4:36146606-36146625 | Msa0161280:CDS | 40.0% | |
| ! | TACCCTTCTTCGAACCATTT+TGG | + | chr1_4:36146611-36146630 | None:intergenic | 40.0% |
| CAATGGATGGAAACTGATCT+AGG | + | chr1_4:36146647-36146666 | None:intergenic | 40.0% | |
| TTGGTCTCGTATCTTATTGG+TGG | + | chr1_4:36146687-36146706 | None:intergenic | 40.0% | |
| TGAATCACCGTGACTGTAAA+AGG | - | chr1_4:36146802-36146821 | Msa0161280:CDS | 40.0% | |
| GTGAAGATCAATGAACAAGG+TGG | - | chr1_4:36146858-36146877 | Msa0161280:CDS | 40.0% | |
| ! | CAATGAAAAGAACAGGTTGG+TGG | - | chr1_4:36146887-36146906 | Msa0161280:intron | 40.0% |
| CTCTACATTGTCATCATTGG+AGG | + | chr1_4:36146973-36146992 | None:intergenic | 40.0% | |
| GTAGAGAACAATACCGATGA+AGG | - | chr1_4:36146987-36147006 | Msa0161280:CDS | 40.0% | |
| TACCGATGAAGGTGATGAAA+CGG | - | chr1_4:36146998-36147017 | Msa0161280:CDS | 40.0% | |
| ATCCGTTTCATCACCTTCAT+CGG | + | chr1_4:36147003-36147022 | None:intergenic | 40.0% | |
| ATGAAGGTGATGAAACGGAT+GGG | - | chr1_4:36147003-36147022 | Msa0161280:CDS | 40.0% | |
| TGCCTCTATGGAATGCTTTG+TGG | + | chr1_4:36139946-36139965 | None:intergenic | 45.0% | |
| TGCTGCAACGAACACATGAA+TGG | + | chr1_4:36140033-36140052 | None:intergenic | 45.0% | |
| CGATCACCTAACAACCTTGA+TGG | - | chr1_4:36140277-36140296 | Msa0161280:CDS | 45.0% | |
| ACTGGTGAAGATGATGAAGC+AGG | - | chr1_4:36140547-36140566 | Msa0161280:CDS | 45.0% | |
| TGAAGATGATGAAGCAGGTG+AGG | - | chr1_4:36140552-36140571 | Msa0161280:CDS | 45.0% | |
| TCATCTGCATCATCATCCAC+TGG | + | chr1_4:36140673-36140692 | None:intergenic | 45.0% | |
| TCCCTTAAGCAAGTGGTGAA+AGG | + | chr1_4:36142098-36142117 | None:intergenic | 45.0% | |
| AAATACCACCAAAGAGGTGG+GGG | + | chr1_4:36142445-36142464 | None:intergenic | 45.0% | |
| GAAATACCACCAAAGAGGTG+GGG | + | chr1_4:36142446-36142465 | None:intergenic | 45.0% | |
| GGAAATACCACCAAAGAGGT+GGG | + | chr1_4:36142447-36142466 | None:intergenic | 45.0% | |
| ATGCTCCTACTACAAGAGGA+GGG | + | chr1_4:36142468-36142487 | None:intergenic | 45.0% | |
| TGGTGGGGAAGAAAGATCTT+TGG | + | chr1_4:36142544-36142563 | None:intergenic | 45.0% | |
| CCATTTGGATTGTTTCGTGG+CGG | + | chr1_4:36142618-36142637 | None:intergenic | 45.0% | |
| !! | TGTTTTCGGATTTGGGATGG+GGG | + | chr1_4:36142656-36142675 | None:intergenic | 45.0% |
| !! | CTGTTTTCGGATTTGGGATG+GGG | + | chr1_4:36142657-36142676 | None:intergenic | 45.0% |
| ! | CAGTTAAGCTTGCTCCTTCA+TGG | - | chr1_4:36142674-36142693 | Msa0161280:intron | 45.0% |
| !!! | ACCATGGTGGTTTTGATGGA+GGG | + | chr1_4:36142732-36142751 | None:intergenic | 45.0% |
| !!! | AACCATGGTGGTTTTGATGG+AGG | + | chr1_4:36142733-36142752 | None:intergenic | 45.0% |
| !!! | CCTAACCATGGTGGTTTTGA+TGG | + | chr1_4:36142736-36142755 | None:intergenic | 45.0% |
| CCATCAAAACCACCATGGTT+AGG | - | chr1_4:36142733-36142752 | Msa0161280:intron | 45.0% | |
| !! | CCCAAAAGAGCTTAACTTGC+TGG | - | chr1_4:36142878-36142897 | Msa0161280:intron | 45.0% |
| GGAAGCTTCCTTAGTCTCTA+TGG | + | chr1_4:36143079-36143098 | None:intergenic | 45.0% | |
| TAGAGAGGTTGTTGCAATGG+GGG | + | chr1_4:36143110-36143129 | None:intergenic | 45.0% | |
| TTCCCTATATTGCCAGGTTC+TGG | - | chr1_4:36143256-36143275 | Msa0161280:intron | 45.0% | |
| TCCCTATATTGCCAGGTTCT+GGG | - | chr1_4:36143257-36143276 | Msa0161280:intron | 45.0% | |
| ACCCAGAACCTGGCAATATA+GGG | + | chr1_4:36143261-36143280 | None:intergenic | 45.0% | |
| AACCCAGAACCTGGCAATAT+AGG | + | chr1_4:36143262-36143281 | None:intergenic | 45.0% | |
| TGCCACAATTTAAGGAGGTG+TGG | - | chr1_4:36143538-36143557 | Msa0161280:intron | 45.0% | |
| AGCCACACCTCCTTAAATTG+TGG | + | chr1_4:36143543-36143562 | None:intergenic | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr1_4:36143550-36143569 | Msa0161280:intron | 45.0% |
| GGCAATGGAATTTCGATGGA+TGG | + | chr1_4:36143979-36143998 | None:intergenic | 45.0% | |
| TGGGTTCGAAACTTGTGACA+TGG | + | chr1_4:36144248-36144267 | None:intergenic | 45.0% | |
| ATAGGGACGTTGGATGAGAA+TGG | + | chr1_4:36145332-36145351 | None:intergenic | 45.0% | |
| ! | TTCACAACTGGTAATGCCCT+CGG | - | chr1_4:36146420-36146439 | Msa0161280:CDS | 45.0% |
| CAGCCAAAATGGTTCGAAGA+AGG | - | chr1_4:36146605-36146624 | Msa0161280:CDS | 45.0% | |
| ATAATCCCAGCTCCGTTTCT+TGG | + | chr1_4:36146706-36146725 | None:intergenic | 45.0% | |
| ACATTGTCATCATTGGAGGC+AGG | + | chr1_4:36146969-36146988 | None:intergenic | 45.0% | |
| GATGAAGGTGATGAAACGGA+TGG | - | chr1_4:36147002-36147021 | Msa0161280:CDS | 45.0% | |
| TGAAGGTGATGAAACGGATG+GGG | - | chr1_4:36147004-36147023 | Msa0161280:CDS | 45.0% | |
| !! | AAGAAAATAAAAAAAAAATA+CGG | - | chr1_4:36145702-36145721 | Msa0161280:intron | 5.0% |
| ! | TTCACAACTGGTAACGCCCT+CGG | - | chr1_4:36139917-36139936 | Msa0161280:CDS | 50.0% |
| ! | GGCCACAAAGCATTCCATAG+AGG | - | chr1_4:36139941-36139960 | Msa0161280:CDS | 50.0% |
| ATGTGACCAAGAAACGGAGC+TGG | - | chr1_4:36140197-36140216 | Msa0161280:CDS | 50.0% | |
| TGACACGGTGATTCCCATCA+AGG | + | chr1_4:36140294-36140313 | None:intergenic | 50.0% | |
| GGAATCACCGTGTCACGAAA+AGG | - | chr1_4:36140299-36140318 | Msa0161280:CDS | 50.0% | |
| TGCAGAAATGTGGGTGGGAT+TGG | - | chr1_4:36140331-36140350 | Msa0161280:CDS | 50.0% | |
| GCAGAAATGTGGGTGGGATT+GGG | - | chr1_4:36140332-36140351 | Msa0161280:CDS | 50.0% | |
| GGTGAGGAACCAAACAACAC+TGG | - | chr1_4:36140568-36140587 | Msa0161280:intron | 50.0% | |
| CGATTTGAATGAGCTGCCAG+TGG | - | chr1_4:36140654-36140673 | Msa0161280:intron | 50.0% | |
| !! | TTGACTTGCAGAAGGCTGTG+AGG | - | chr1_4:36141809-36141828 | Msa0161280:intron | 50.0% |
| GGGAATCTGTTGGGATCACA+AGG | - | chr1_4:36142019-36142038 | Msa0161280:intron | 50.0% | |
| GGGAAATACCACCAAAGAGG+TGG | + | chr1_4:36142448-36142467 | None:intergenic | 50.0% | |
| GGAGGGAAATACCACCAAAG+AGG | + | chr1_4:36142451-36142470 | None:intergenic | 50.0% | |
| GATGCTCCTACTACAAGAGG+AGG | + | chr1_4:36142469-36142488 | None:intergenic | 50.0% | |
| GAGGATGCTCCTACTACAAG+AGG | + | chr1_4:36142472-36142491 | None:intergenic | 50.0% | |
| TTTGGATTGTTTCGTGGCGG+TGG | + | chr1_4:36142615-36142634 | None:intergenic | 50.0% | |
| CCGCCACGAAACAATCCAAA+TGG | - | chr1_4:36142615-36142634 | Msa0161280:intron | 50.0% | |
| GAATTTGTCCTTGGGCGCTT+CGG | - | chr1_4:36142915-36142934 | Msa0161280:intron | 50.0% | |
| TCGGATCTGATTTCTGCTGC+TGG | - | chr1_4:36142934-36142953 | Msa0161280:intron | 50.0% | |
| AGAGACTAAGGAAGCTTCCG+AGG | - | chr1_4:36143080-36143099 | Msa0161280:intron | 50.0% | |
| ! | GAGCTGGTGGATGAATAGAG+AGG | + | chr1_4:36143125-36143144 | None:intergenic | 50.0% |
| TCCACCAGCTCTCAAACATC+TGG | - | chr1_4:36143134-36143153 | Msa0161280:intron | 50.0% | |
| TCCAGATGTTTGAGAGCTGG+TGG | + | chr1_4:36143138-36143157 | None:intergenic | 50.0% | |
| GAAACCCACCATGAAGGAGG+GGG | + | chr1_4:36142423-36142442 | None:intergenic | 55.0% | |
| GGAAACCCACCATGAAGGAG+GGG | + | chr1_4:36142424-36142443 | None:intergenic | 55.0% | |
| GGGAAACCCACCATGAAGGA+GGG | + | chr1_4:36142425-36142444 | None:intergenic | 55.0% | |
| GATCTTTCTTCCCCACCACC+AGG | - | chr1_4:36142546-36142565 | Msa0161280:intron | 55.0% | |
| CATCGGCGGGAAGGAAATCT+TGG | + | chr1_4:36142577-36142596 | None:intergenic | 55.0% | |
| ATTGTTTCGTGGCGGTGGCT+CGG | + | chr1_4:36142610-36142629 | None:intergenic | 55.0% | |
| !! | GGTTTTGATGGAGGGCAGGT+GGG | + | chr1_4:36142724-36142743 | None:intergenic | 55.0% |
| !!! | TGGTTTTGATGGAGGGCAGG+TGG | + | chr1_4:36142725-36142744 | None:intergenic | 55.0% |
| !!! | TGGTGGTTTTGATGGAGGGC+AGG | + | chr1_4:36142728-36142747 | None:intergenic | 55.0% |
| GCCCTCCATCAAAACCACCA+TGG | - | chr1_4:36142728-36142747 | Msa0161280:intron | 55.0% | |
| ! | AATCAGATCCGAAGCGCCCA+AGG | + | chr1_4:36142926-36142945 | None:intergenic | 55.0% |
| ACTAAGGAAGCTTCCGAGGC+TGG | - | chr1_4:36143084-36143103 | Msa0161280:intron | 55.0% | |
| CCTCTTGCAAACCCAGAACC+TGG | + | chr1_4:36143271-36143290 | None:intergenic | 55.0% | |
| !! | CCAGGTTCTGGGTTTGCAAG+AGG | - | chr1_4:36143268-36143287 | Msa0161280:intron | 55.0% |
| ! | ACAACTGGTAATGCCCTCGG+CGG | - | chr1_4:36146423-36146442 | Msa0161280:CDS | 55.0% |
| GAATTGTTTGTGGCCGCCGA+GGG | + | chr1_4:36146439-36146458 | None:intergenic | 55.0% | |
| ACGAGACCAAGAAACGGAGC+TGG | - | chr1_4:36146697-36146716 | Msa0161280:CDS | 55.0% | |
| CGAGACCAAGAAACGGAGCT+GGG | - | chr1_4:36146698-36146717 | Msa0161280:CDS | 55.0% | |
| ! | ACAACTGGTAACGCCCTCGG+CGG | - | chr1_4:36139920-36139939 | Msa0161280:CDS | 60.0% |
| GAATGCTTTGTGGCCGCCGA+GGG | + | chr1_4:36139936-36139955 | None:intergenic | 60.0% | |
| GGGGAAACCCACCATGAAGG+AGG | + | chr1_4:36142426-36142445 | None:intergenic | 60.0% | |
| GTGGGGGAAACCCACCATGA+AGG | + | chr1_4:36142429-36142448 | None:intergenic | 60.0% | |
| GTGGGTTTCCCCCACCTCTT+TGG | - | chr1_4:36142434-36142453 | Msa0161280:intron | 60.0% | |
| GGTTTCCCCCACCTCTTTGG+TGG | - | chr1_4:36142437-36142456 | Msa0161280:intron | 60.0% | |
| AAGGAAATCTTGGCGGCGCC+TGG | + | chr1_4:36142567-36142586 | None:intergenic | 60.0% | |
| CGGCGGGAAGGAAATCTTGG+CGG | + | chr1_4:36142574-36142593 | None:intergenic | 60.0% | |
| TTGTTTCGTGGCGGTGGCTC+GGG | + | chr1_4:36142609-36142628 | None:intergenic | 60.0% | |
| TGGGATGCACCATGAGGGTG+GGG | + | chr1_4:36142705-36142724 | None:intergenic | 60.0% | |
| GTGGGATGCACCATGAGGGT+GGG | + | chr1_4:36142706-36142725 | None:intergenic | 60.0% | |
| GCAGGTGGGATGCACCATGA+GGG | + | chr1_4:36142710-36142729 | None:intergenic | 60.0% | |
| GGAATTGTTTGTGGCCGCCG+AGG | + | chr1_4:36146440-36146459 | None:intergenic | 60.0% | |
| GGAATGCTTTGTGGCCGCCG+AGG | + | chr1_4:36139937-36139956 | None:intergenic | 65.0% | |
| ACCCACCATGAAGGAGGGGG+CGG | + | chr1_4:36142420-36142439 | None:intergenic | 65.0% | |
| GAAATCTTGGCGGCGCCTGG+TGG | + | chr1_4:36142564-36142583 | None:intergenic | 65.0% | |
| AGGGTGGGGAGCAGCCATGA+AGG | + | chr1_4:36142691-36142710 | None:intergenic | 65.0% | |
| ATGGCTGCTCCCCACCCTCA+TGG | - | chr1_4:36142693-36142712 | Msa0161280:intron | 65.0% | |
| GGTGGGATGCACCATGAGGG+TGG | + | chr1_4:36142707-36142726 | None:intergenic | 65.0% | |
| GGCAGGTGGGATGCACCATG+AGG | + | chr1_4:36142711-36142730 | None:intergenic | 65.0% | |
| GTTGCAATGGGGGCCAGCCT+CGG | + | chr1_4:36143100-36143119 | None:intergenic | 65.0% | |
| TGTGGCCGCCCCCTCCTTCA+TGG | - | chr1_4:36142412-36142431 | Msa0161280:intron | 70.0% | |
| GCCGCCCCCTCCTTCATGGT+GGG | - | chr1_4:36142416-36142435 | Msa0161280:intron | 70.0% | |
| TCTTGGCGGCGCCTGGTGGT+GGG | + | chr1_4:36142560-36142579 | None:intergenic | 70.0% | |
| ATCTTGGCGGCGCCTGGTGG+TGG | + | chr1_4:36142561-36142580 | None:intergenic | 70.0% | |
| ! | TGGTGGTCGCATCGGCGGGA+AGG | + | chr1_4:36142586-36142605 | None:intergenic | 70.0% |
| ! | TCGGGTGGTGGTCGCATCGG+CGG | + | chr1_4:36142591-36142610 | None:intergenic | 70.0% |
| ! | GGCTCGGGTGGTGGTCGCAT+CGG | + | chr1_4:36142594-36142613 | None:intergenic | 70.0% |
| ! | TTTCGTGGCGGTGGCTCGGG+TGG | + | chr1_4:36142606-36142625 | None:intergenic | 70.0% |
| GGCCGCCCCCTCCTTCATGG+TGG | - | chr1_4:36142415-36142434 | Msa0161280:intron | 75.0% | |
| ! | CTTGGCGGCGCCTGGTGGTG+GGG | + | chr1_4:36142559-36142578 | None:intergenic | 75.0% |
| ! | CGGGTGGTGGTCGCATCGGC+GGG | + | chr1_4:36142590-36142609 | None:intergenic | 75.0% |
| !! | CGTGGCGGTGGCTCGGGTGG+TGG | + | chr1_4:36142603-36142622 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 36139800 | 36147118 | 36139800 | ID=Msa0161280;Name=Msa0161280 |
| chr1_4 | mRNA | 36139800 | 36147118 | 36139800 | ID=Msa0161280-mRNA-1;Parent=Msa0161280;Name=Msa0161280-mRNA-1;_AED=0.07;_eAED=0.18;_QI=0|0|0|1|0|0|5|0|510 |
| chr1_4 | exon | 36146908 | 36147118 | 36146908 | ID=Msa0161280-mRNA-1:exon:10752;Parent=Msa0161280-mRNA-1 |
| chr1_4 | exon | 36146791 | 36146899 | 36146791 | ID=Msa0161280-mRNA-1:exon:10751;Parent=Msa0161280-mRNA-1 |
| chr1_4 | exon | 36146575 | 36146786 | 36146575 | ID=Msa0161280-mRNA-1:exon:10750;Parent=Msa0161280-mRNA-1 |
| chr1_4 | exon | 36146324 | 36146541 | 36146324 | ID=Msa0161280-mRNA-1:exon:10749;Parent=Msa0161280-mRNA-1 |
| chr1_4 | exon | 36139800 | 36140582 | 36139800 | ID=Msa0161280-mRNA-1:exon:10748;Parent=Msa0161280-mRNA-1 |
| chr1_4 | CDS | 36146908 | 36147118 | 36146908 | ID=Msa0161280-mRNA-1:cds;Parent=Msa0161280-mRNA-1 |
| chr1_4 | CDS | 36146791 | 36146899 | 36146791 | ID=Msa0161280-mRNA-1:cds;Parent=Msa0161280-mRNA-1 |
| chr1_4 | CDS | 36146575 | 36146786 | 36146575 | ID=Msa0161280-mRNA-1:cds;Parent=Msa0161280-mRNA-1 |
| chr1_4 | CDS | 36146324 | 36146541 | 36146324 | ID=Msa0161280-mRNA-1:cds;Parent=Msa0161280-mRNA-1 |
| chr1_4 | CDS | 36139800 | 36140582 | 36139800 | ID=Msa0161280-mRNA-1:cds;Parent=Msa0161280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
