AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0164020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164020 MtrunA17_Chr7g0228401 52.209 498 149 5 1 412 1 495 2.68e-159 458
Msa0164020 MtrunA17_Chr1g0177901 90.094 212 17 1 206 417 4 211 1.25e-138 395
Msa0164020 MtrunA17_Chr7g0228531 52.500 440 159 9 1 414 1 416 6.07e-138 401
Msa0164020 MtrunA17_Chr7g0228481 52.273 440 160 9 1 414 1 416 1.75e-137 400
Msa0164020 MtrunA17_Chr7g0233161 47.955 269 115 3 4 247 82 350 2.03e-76 241
Msa0164020 MtrunA17_Chr7g0233061 38.369 417 185 10 1 404 1 358 5.26e-72 230
Msa0164020 MtrunA17_Chr4g0046181 46.324 272 121 4 1 247 1 272 1.26e-66 214
Msa0164020 MtrunA17_Chr7g0233151 54.386 171 61 5 246 414 1 156 2.94e-49 165
Msa0164020 MtrunA17_Chr3g0117511 44.444 216 103 5 133 335 119 330 3.46e-47 167
Msa0164020 MtrunA17_Chr4g0058991 56.061 132 57 1 189 320 202 332 5.45e-45 162
Msa0164020 MtrunA17_Chr5g0429661 47.879 165 75 4 196 351 122 284 5.92e-44 156
Msa0164020 MtrunA17_Chr7g0238631 50.000 124 60 1 169 292 88 209 1.05e-33 132
Msa0164020 MtrunA17_Chr1g0157731 53.846 104 47 1 196 298 91 194 2.84e-32 129
Msa0164020 MtrunA17_Chr3g0139671 53.846 104 47 1 196 298 85 188 1.47e-31 127
Msa0164020 MtrunA17_Chr4g0008551 53.535 99 46 0 196 294 38 136 6.52e-31 121
Msa0164020 MtrunA17_Chr5g0397841 54.808 104 45 1 189 290 101 204 1.43e-29 119
Msa0164020 MtrunA17_Chr5g0397841 33.333 99 62 2 195 289 54 152 2.61e-11 65.1
Msa0164020 MtrunA17_Chr2g0309911 49.000 100 50 1 194 292 11 110 9.16e-28 112
Msa0164020 MtrunA17_Chr4g0022911 40.000 155 83 4 190 338 9 159 1.98e-27 110
Msa0164020 MtrunA17_Chr3g0133601 50.000 96 48 0 196 291 37 132 2.34e-27 108
Msa0164020 MtrunA17_Chr4g0053431 52.083 96 46 0 196 291 5 100 3.88e-27 109
Msa0164020 MtrunA17_Chr4g0022901 40.769 130 74 2 190 316 9 138 5.30e-27 108
Msa0164020 MtrunA17_Chr5g0401731 42.537 134 70 2 187 313 6 139 9.27e-27 109
Msa0164020 MtrunA17_Chr5g0437321 51.042 96 47 0 196 291 19 114 2.77e-26 107
Msa0164020 MtrunA17_Chr5g0410961 44.762 105 57 1 191 294 9 113 3.72e-26 108
Msa0164020 MtrunA17_Chr2g0281071 45.794 107 57 1 189 294 8 114 8.10e-26 107
Msa0164020 MtrunA17_Chr8g0342541 46.078 102 54 1 194 294 12 113 9.09e-26 107
Msa0164020 MtrunA17_Chr5g0395281 46.078 102 54 1 191 291 9 110 1.06e-25 106
Msa0164020 MtrunA17_Chr4g0048511 44.860 107 58 1 189 294 8 114 1.10e-25 107
Msa0164020 MtrunA17_Chr4g0022931 46.154 104 55 1 190 292 9 112 1.11e-25 105
Msa0164020 MtrunA17_Chr4g0039971 46.078 102 54 1 191 291 10 111 2.09e-25 106
Msa0164020 MtrunA17_Chr2g0323351 42.857 119 64 2 194 311 12 127 2.55e-25 103
Msa0164020 MtrunA17_Chr4g0046171 47.857 140 56 4 277 414 1 125 3.04e-25 100
Msa0164020 MtrunA17_Chr1g0193371 37.931 145 77 4 194 335 12 146 3.05e-25 105
Msa0164020 MtrunA17_Chr2g0323411 45.714 105 56 1 191 294 9 113 3.31e-25 105
Msa0164020 MtrunA17_Chr3g0099131 46.535 101 53 1 192 291 39 139 5.27e-25 107
Msa0164020 MtrunA17_Chr2g0330041 46.078 102 54 1 194 294 12 113 6.13e-25 105
Msa0164020 MtrunA17_Chr3g0115821 46.078 102 54 1 191 291 9 110 6.67e-25 104
Msa0164020 MtrunA17_Chr8g0342521 45.098 102 55 1 194 294 12 113 7.29e-25 104
Msa0164020 MtrunA17_Chr3g0088461 46.602 103 54 1 191 292 19 121 1.12e-24 103
Msa0164020 MtrunA17_Chr7g0270891 31.746 189 119 3 194 379 12 193 1.13e-24 104
Msa0164020 MtrunA17_Chr1g0193801 38.636 132 69 3 194 322 12 134 2.23e-24 103
Msa0164020 MtrunA17_Chr5g0397231 35.294 153 94 3 188 339 9 157 2.47e-24 102
Msa0164020 MtrunA17_Chr1g0154031 48.485 99 50 1 194 291 76 174 2.54e-24 103
Msa0164020 MtrunA17_Chr4g0042501 40.945 127 74 1 164 289 72 198 3.52e-24 103
Msa0164020 MtrunA17_Chr6g0454921 47.059 102 54 0 189 290 8 109 3.87e-24 99.4
Msa0164020 MtrunA17_Chr5g0435101 36.364 165 94 4 191 350 8 166 4.11e-24 99.4
Msa0164020 MtrunA17_Chr4g0037141 40.769 130 69 3 196 324 14 136 5.19e-24 100
Msa0164020 MtrunA17_Chr1g0211161 44.000 100 55 1 194 292 13 112 6.59e-24 99.4
Msa0164020 MtrunA17_Chr8g0354661 41.129 124 68 3 172 291 13 135 7.17e-24 103
Msa0164020 MtrunA17_Chr7g0274581 46.465 99 52 1 194 291 12 110 7.35e-24 98.6
Msa0164020 MtrunA17_Chr5g0417621 47.000 100 53 0 190 289 128 227 8.30e-24 102
Msa0164020 MtrunA17_Chr2g0328771 40.870 115 63 2 194 303 20 134 8.54e-24 100
Msa0164020 MtrunA17_Chr8g0385321 44.660 103 55 2 196 296 14 116 9.85e-24 100
Msa0164020 MtrunA17_Chr4g0013361 36.646 161 86 5 194 345 10 163 9.93e-24 100
Msa0164020 MtrunA17_Chr8g0342481 45.631 103 54 2 194 294 12 114 1.02e-23 102
Msa0164020 MtrunA17_Chr7g0271241 44.898 98 53 1 194 290 12 109 1.23e-23 101
Msa0164020 MtrunA17_Chr4g0055981 42.727 110 60 2 196 302 57 166 1.38e-23 98.6
Msa0164020 MtrunA17_Chr1g0167661 44.444 108 57 2 194 298 12 119 1.46e-23 99.0
Msa0164020 MtrunA17_Chr8g0349261 45.000 100 53 2 194 291 13 112 1.67e-23 99.8
Msa0164020 MtrunA17_Chr6g0452271 41.905 105 60 1 191 294 9 113 2.02e-23 100
Msa0164020 MtrunA17_Chr3g0117091 43.137 102 57 1 194 294 12 113 2.14e-23 100
Msa0164020 MtrunA17_Chr8g0387421 42.857 105 56 2 188 291 9 110 3.42e-23 99.4
Msa0164020 MtrunA17_Chr8g0346561 45.455 99 53 1 194 291 12 110 4.69e-23 98.6
Msa0164020 MtrunA17_Chr4g0058631 43.137 102 57 1 194 294 12 113 4.74e-23 99.8
Msa0164020 MtrunA17_Chr3g0131121 45.631 103 54 2 196 296 14 116 5.12e-23 98.2
Msa0164020 MtrunA17_Chr3g0080861 43.925 107 58 2 194 298 37 143 5.18e-23 101
Msa0164020 MtrunA17_Chr6g0480581 40.984 122 69 1 196 317 4 122 5.53e-23 97.1
Msa0164020 MtrunA17_Chr4g0032401 45.000 100 54 1 194 292 17 116 5.86e-23 99.0
Msa0164020 MtrunA17_Chr7g0275911 44.444 99 54 1 194 291 12 110 6.38e-23 97.1
Msa0164020 MtrunA17_Chr5g0416341 42.500 120 65 2 174 291 4 121 8.94e-23 100
Msa0164020 MtrunA17_Chr7g0228231 42.718 103 58 1 190 291 10 112 1.30e-22 95.1
Msa0164020 MtrunA17_Chr4g0022891 39.815 108 64 1 194 300 12 119 1.73e-22 95.5
Msa0164020 MtrunA17_Chr6g0460671 38.406 138 82 1 155 289 55 192 1.99e-22 97.8
Msa0164020 MtrunA17_Chr1g0187761 38.793 116 69 2 194 307 12 127 2.01e-22 95.9
Msa0164020 MtrunA17_Chr8g0343831 43.434 99 55 1 194 291 8 106 2.03e-22 95.9
Msa0164020 MtrunA17_Chr3g0103281 42.718 103 58 1 190 291 8 110 2.30e-22 97.1
Msa0164020 MtrunA17_Chr6g0460661 43.878 98 55 0 196 293 16 113 2.54e-22 92.8
Msa0164020 MtrunA17_Chr4g0044421 46.078 102 50 2 196 294 14 113 2.78e-22 94.0
Msa0164020 MtrunA17_Chr7g0261281 43.434 99 55 1 194 291 12 110 4.05e-22 95.5
Msa0164020 MtrunA17_Chr4g0070641 44.444 99 54 1 194 291 12 110 4.23e-22 92.4
Msa0164020 MtrunA17_Chr4g0057031 42.424 99 56 1 194 291 12 110 4.61e-22 95.1
Msa0164020 MtrunA17_Chr1g0203411 43.434 99 55 1 194 291 12 110 5.04e-22 95.5
Msa0164020 MtrunA17_Chr7g0240821 37.857 140 71 3 199 336 6 131 5.14e-22 94.0
Msa0164020 MtrunA17_Chr5g0434911 40.678 118 66 2 178 294 8 122 5.41e-22 95.1
Msa0164020 MtrunA17_Chr4g0070611 44.444 99 54 1 194 291 12 110 5.54e-22 95.5
Msa0164020 MtrunA17_Chr6g0450101 36.800 125 77 2 190 312 10 134 6.80e-22 93.2
Msa0164020 MtrunA17_Chr1g0167691 42.424 99 56 1 194 291 12 110 7.76e-22 94.0
Msa0164020 MtrunA17_Chr1g0186061 40.777 103 60 1 190 291 16 118 7.90e-22 94.4
Msa0164020 MtrunA17_Chr1g0194291 39.823 113 67 1 180 291 7 119 8.40e-22 94.4
Msa0164020 MtrunA17_Chr8g0362231 39.394 132 74 2 183 308 5 136 9.84e-22 96.7
Msa0164020 MtrunA17_Chr1g0168661 38.525 122 69 2 190 305 17 138 1.47e-21 93.6
Msa0164020 MtrunA17_Chr7g0254261 51.064 94 46 0 196 289 89 182 1.53e-21 95.1
Msa0164020 MtrunA17_Chr1g0180391 43.000 100 56 1 193 291 18 117 1.61e-21 92.8
Msa0164020 MtrunA17_Chr7g0228991 43.434 99 55 1 194 291 29 127 1.69e-21 93.6
Msa0164020 MtrunA17_Chr1g0209661 40.196 102 60 1 189 289 22 123 1.74e-21 94.4
Msa0164020 MtrunA17_Chr5g0440781 42.056 107 60 2 192 296 10 116 2.13e-21 91.3
Msa0164020 MtrunA17_Chr5g0434931 42.157 102 58 1 194 294 35 136 2.14e-21 93.6
Msa0164020 MtrunA17_Chr4g0042671 34.559 136 82 2 194 322 12 147 2.40e-21 95.1
Msa0164020 MtrunA17_Chr5g0434841 41.026 117 63 2 179 294 10 121 2.73e-21 94.0
Msa0164020 MtrunA17_Chr8g0334881 43.243 111 61 2 188 296 4 114 2.78e-21 94.0
Msa0164020 MtrunA17_Chr5g0440761 42.056 107 60 2 192 296 10 116 2.80e-21 92.8
Msa0164020 MtrunA17_Chr5g0441141 42.056 107 60 2 192 296 10 116 3.22e-21 92.8
Msa0164020 MtrunA17_Chr1g0151941 44.000 100 54 2 194 291 12 111 3.86e-21 92.0
Msa0164020 MtrunA17_Chr3g0125801 48.936 94 48 0 196 289 16 109 4.98e-21 92.8
Msa0164020 MtrunA17_Chr3g0110351 42.424 99 56 1 194 291 12 110 5.02e-21 92.8
Msa0164020 MtrunA17_Chr5g0434571 42.424 99 56 1 194 291 48 146 5.31e-21 93.6
Msa0164020 MtrunA17_Chr4g0022881 40.816 98 57 1 195 291 13 110 5.91e-21 91.3
Msa0164020 MtrunA17_Chr7g0220341 42.574 101 55 1 194 291 25 125 6.76e-21 92.0
Msa0164020 MtrunA17_Chr7g0217741 42.424 99 56 1 194 291 12 110 7.25e-21 92.4
Msa0164020 MtrunA17_Chr3g0104491 49.398 83 38 1 246 324 17 99 7.31e-21 92.0
Msa0164020 MtrunA17_Chr4g0030881 40.000 115 61 1 195 301 8 122 1.28e-20 90.9
Msa0164020 MtrunA17_Chr5g0434831 41.121 107 62 1 189 294 2 108 2.02e-20 88.6
Msa0164020 MtrunA17_Chr7g0217221 42.424 99 56 1 194 291 12 110 2.42e-20 90.1
Msa0164020 MtrunA17_Chr2g0311221 41.176 102 59 1 191 291 11 112 2.55e-20 91.3
Msa0164020 MtrunA17_Chr4g0068061 33.974 156 83 3 194 329 12 167 3.11e-20 91.3
Msa0164020 MtrunA17_Chr6g0453471 42.424 99 56 1 194 291 12 110 3.54e-20 91.3
Msa0164020 MtrunA17_Chr2g0327351 37.815 119 72 2 191 307 9 127 4.70e-20 90.5
Msa0164020 MtrunA17_Chr5g0417821 42.857 98 55 1 194 290 7 104 6.21e-20 89.4
Msa0164020 MtrunA17_Chr5g0400821 30.435 184 103 5 191 351 9 190 9.33e-20 89.4
Msa0164020 MtrunA17_Chr5g0441131 41.346 104 59 2 193 294 8 111 1.00e-19 86.3
Msa0164020 MtrunA17_Chr7g0247131 50.685 73 34 1 221 291 4 76 1.03e-19 88.6
Msa0164020 MtrunA17_Chr2g0327821 39.286 112 67 1 191 301 3 114 1.31e-19 87.4
Msa0164020 MtrunA17_Chr1g0192411 42.157 102 58 1 194 294 12 113 1.35e-19 90.1
Msa0164020 MtrunA17_Chr3g0121241 37.374 99 61 1 194 291 42 140 1.49e-19 88.6
Msa0164020 MtrunA17_Chr2g0322521 43.697 119 66 1 174 291 9 127 1.54e-19 89.7
Msa0164020 MtrunA17_Chr4g0060721 40.741 108 58 3 194 297 13 118 1.57e-19 89.0
Msa0164020 MtrunA17_Chr4g0028311 31.953 169 103 5 191 347 9 177 1.59e-19 89.0
Msa0164020 MtrunA17_Chr7g0228891 40.404 99 58 1 194 291 12 110 1.93e-19 87.8
Msa0164020 MtrunA17_Chr1g0194301 38.384 99 60 1 194 291 33 131 2.27e-19 87.8
Msa0164020 MtrunA17_Chr6g0453211 40.404 99 58 1 194 291 12 110 2.54e-19 88.2
Msa0164020 MtrunA17_Chr8g0360111 35.246 122 71 2 178 291 2 123 3.62e-19 86.7
Msa0164020 MtrunA17_Chr6g0470971 40.777 103 60 1 190 291 10 112 3.79e-19 87.0
Msa0164020 MtrunA17_Chr3g0092401 40.196 102 60 1 194 294 13 114 4.12e-19 87.4
Msa0164020 MtrunA17_Chr1g0203441 41.837 98 56 1 195 291 14 111 4.14e-19 86.7
Msa0164020 MtrunA17_Chr3g0099141 45.882 85 45 1 191 274 37 121 4.35e-19 83.2
Msa0164020 MtrunA17_Chr4g0072751 40.777 103 59 2 191 291 9 111 4.95e-19 87.8
Msa0164020 MtrunA17_Chr4g0054391 41.176 102 58 2 191 290 9 110 5.18e-19 87.0
Msa0164020 MtrunA17_Chr7g0254411 42.453 106 59 2 194 297 12 117 6.23e-19 87.4
Msa0164020 MtrunA17_Chr1g0152011 40.777 103 59 2 191 291 9 111 8.32e-19 87.0
Msa0164020 MtrunA17_Chr1g0194951 41.414 99 57 1 194 291 12 110 8.69e-19 87.4
Msa0164020 MtrunA17_Chr3g0135311 36.508 126 77 3 191 313 9 134 1.44e-18 86.3
Msa0164020 MtrunA17_Chr7g0264641 39.806 103 60 2 191 291 9 111 4.88e-18 83.6
Msa0164020 MtrunA17_Chr2g0323321 39.759 83 49 1 192 273 9 91 6.85e-18 79.0
Msa0164020 MtrunA17_Chr3g0104501 67.308 52 17 0 196 247 133 184 1.22e-17 80.9
Msa0164020 MtrunA17_Chr6g0487491 35.172 145 77 5 191 325 9 146 3.04e-17 81.3
Msa0164020 MtrunA17_Chr2g0293911 40.196 102 60 1 191 291 21 122 3.88e-17 82.0
Msa0164020 MtrunA17_Chr5g0421201 46.392 97 44 3 248 341 12 103 1.01e-16 77.8
Msa0164020 MtrunA17_Chr5g0434901 50.000 66 33 0 229 294 9 74 1.87e-16 75.1
Msa0164020 MtrunA17_Chr4g0068921 38.318 107 65 1 191 296 21 127 2.66e-16 77.0
Msa0164020 MtrunA17_Chr7g0269831 44.444 99 54 1 194 291 12 110 8.54e-16 78.2
Msa0164020 MtrunA17_Chr8g0342511 39.241 79 47 1 191 268 9 87 4.46e-15 70.9
Msa0164020 MtrunA17_Chr8g0342531 38.272 81 49 1 191 270 9 89 9.18e-15 72.0
Msa0164020 MtrunA17_Chr7g0229101 46.970 66 35 0 229 294 8 73 2.24e-14 71.6
Msa0164020 MtrunA17_Chr7g0238651 37.113 97 58 1 196 289 7 103 2.42e-14 73.9
Msa0164020 MtrunA17_Chr8g0342461 43.038 79 43 2 194 270 12 90 2.93e-14 69.7
Msa0164020 MtrunA17_Chr4g0042611 40.260 77 45 1 194 269 12 88 3.50e-14 67.8
Msa0164020 MtrunA17_Chr8g0342471 43.038 79 43 2 194 270 12 90 4.04e-14 69.3
Msa0164020 MtrunA17_Chr5g0395221 38.750 80 48 1 191 269 9 88 4.78e-13 64.7
Msa0164020 MtrunA17_Chr2g0294811 37.662 77 47 1 194 269 12 88 6.25e-13 65.5
Msa0164020 MtrunA17_Chr7g0229131 43.939 66 37 0 229 294 8 73 1.60e-12 65.5
Msa0164020 MtrunA17_Chr5g0425591 39.286 84 49 2 193 274 8 91 1.95e-12 63.2
Msa0164020 MtrunA17_Chr7g0274481 35.417 96 61 1 194 289 5 99 3.34e-12 68.6
Msa0164020 MtrunA17_Chr3g0093811 36.709 79 46 2 217 291 2 80 7.79e-12 65.5
Msa0164020 MtrunA17_Chr5g0397691 34.737 95 59 1 195 289 6 97 9.05e-12 67.0
Msa0164020 MtrunA17_Chr6g0483051 29.710 138 88 4 198 327 71 207 1.29e-11 66.6
Msa0164020 MtrunA17_Chr6g0483051 36.458 96 60 1 194 289 118 212 9.09e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164020 AT4G18770.1 58.647 133 54 1 188 320 209 340 2.26e-48 171
Msa0164020 AT5G40360.1 46.078 204 90 4 132 321 87 284 7.56e-48 167
Msa0164020 AT3G27785.1 47.895 190 87 4 190 371 183 368 2.48e-46 165
Msa0164020 AT5G11050.1 55.147 136 61 0 169 304 78 213 5.26e-44 159
Msa0164020 AT5G58850.1 45.349 172 81 3 193 351 102 273 1.61e-42 155
Msa0164020 AT2G25230.1 47.368 152 78 2 190 340 20 170 2.30e-38 139
Msa0164020 AT5G40430.1 46.377 138 68 3 190 325 48 181 8.06e-34 127
Msa0164020 AT3G09370.2 58.763 97 40 0 196 292 135 231 1.09e-32 129
Msa0164020 AT5G11510.3 53.846 104 47 1 196 298 81 184 1.11e-32 131
Msa0164020 AT5G11510.1 53.846 104 47 1 196 298 81 184 1.11e-32 131
Msa0164020 AT5G11510.4 53.846 104 47 1 196 298 81 184 1.11e-32 131
Msa0164020 AT3G09370.1 58.763 97 40 0 196 292 130 226 1.14e-32 129
Msa0164020 AT5G11510.2 53.846 104 47 1 196 298 81 184 1.28e-32 130
Msa0164020 AT5G11510.5 53.846 104 47 1 196 298 81 184 1.39e-32 130
Msa0164020 AT3G09370.3 58.763 97 40 0 196 292 143 239 1.74e-32 129
Msa0164020 AT5G02320.1 56.701 97 42 0 196 292 127 223 1.59e-31 126
Msa0164020 AT5G02320.2 56.701 97 42 0 196 292 127 223 1.59e-31 126
Msa0164020 AT5G02320.3 56.701 97 42 0 196 292 67 163 1.71e-31 125
Msa0164020 AT4G32730.5 51.923 104 49 1 196 298 87 190 4.15e-30 123
Msa0164020 AT4G32730.4 51.923 104 49 1 196 298 87 190 4.15e-30 123
Msa0164020 AT4G32730.3 51.923 104 49 1 196 298 87 190 4.15e-30 123
Msa0164020 AT4G32730.2 51.923 104 49 1 196 298 87 190 4.15e-30 123
Msa0164020 AT4G32730.1 51.923 104 49 1 196 298 87 190 5.51e-30 123
Msa0164020 AT3G55730.1 53.535 99 46 0 196 294 56 154 1.10e-28 116
Msa0164020 AT3G09230.1 53.535 99 46 0 196 294 55 153 7.86e-28 114
Msa0164020 AT3G12720.1 41.606 137 74 3 176 306 1 137 1.06e-27 112
Msa0164020 AT3G11440.2 47.573 103 53 1 190 291 37 139 1.66e-27 114
Msa0164020 AT3G28470.1 46.078 102 54 1 191 291 9 110 1.76e-27 111
Msa0164020 AT4G00540.2 53.398 103 45 2 193 292 100 202 2.06e-27 113
Msa0164020 AT4G00540.2 34.951 103 58 2 196 289 46 148 7.45e-11 63.9
Msa0164020 AT4G00540.1 53.398 103 45 2 193 292 98 200 4.33e-27 112
Msa0164020 AT3G11440.3 47.573 103 53 1 190 291 37 139 4.51e-27 113
Msa0164020 AT3G11440.4 47.573 103 53 1 190 291 37 139 4.51e-27 113
Msa0164020 AT3G11440.1 47.573 103 53 1 190 291 37 139 4.51e-27 113
Msa0164020 AT4G05100.1 45.794 107 57 1 189 294 8 114 2.41e-26 108
Msa0164020 AT1G57560.2 36.310 168 85 4 194 354 12 164 6.72e-26 106
Msa0164020 AT1G09540.1 40.559 143 76 4 194 335 12 146 2.08e-25 106
Msa0164020 AT3G13890.2 46.078 102 54 1 194 294 12 113 2.24e-25 106
Msa0164020 AT3G53200.1 41.958 143 75 4 189 324 4 145 2.25e-25 103
Msa0164020 AT4G28110.1 46.078 102 54 1 194 294 12 113 2.38e-25 105
Msa0164020 AT3G13890.1 43.243 111 53 1 194 294 12 122 6.24e-25 105
Msa0164020 AT2G26960.1 39.695 131 76 2 173 302 1 129 6.55e-25 106
Msa0164020 AT1G57560.1 45.000 100 54 1 194 292 12 111 6.57e-25 104
Msa0164020 AT5G55020.1 45.192 104 56 1 194 296 26 129 8.48e-25 107
Msa0164020 AT4G21440.1 47.059 102 53 1 194 294 12 113 8.94e-25 104
Msa0164020 AT5G52600.1 42.857 119 62 2 188 305 6 119 1.28e-24 100
Msa0164020 AT4G01680.3 39.130 138 76 3 194 330 12 142 1.28e-24 102
Msa0164020 AT4G37260.1 48.958 96 49 0 196 291 13 108 1.36e-24 103
Msa0164020 AT4G01680.1 39.130 138 76 3 194 330 12 142 1.39e-24 103
Msa0164020 AT1G69560.2 46.000 100 54 0 191 290 118 217 1.47e-24 103
Msa0164020 AT1G69560.1 46.000 100 54 0 191 290 102 201 1.60e-24 103
Msa0164020 AT3G61250.1 44.000 100 55 1 193 291 11 110 1.69e-24 102
Msa0164020 AT5G06100.1 44.444 99 54 1 194 291 32 130 2.59e-24 104
Msa0164020 AT4G38620.1 35.088 171 92 5 196 356 14 175 2.95e-24 102
Msa0164020 AT5G26660.1 45.000 100 54 1 194 292 12 111 3.44e-24 103
Msa0164020 AT3G08500.1 47.000 100 52 1 194 292 30 129 4.22e-24 102
Msa0164020 AT5G10280.1 44.118 102 56 1 191 291 9 110 4.36e-24 102
Msa0164020 AT5G06100.5 44.444 99 54 1 194 291 32 130 5.65e-24 104
Msa0164020 AT5G06100.2 44.444 99 54 1 194 291 32 130 5.65e-24 104
Msa0164020 AT5G06100.3 44.444 99 54 1 194 291 32 130 5.65e-24 104
Msa0164020 AT5G06100.4 44.444 99 54 1 194 291 32 130 5.65e-24 104
Msa0164020 AT2G23290.1 47.573 103 54 0 189 291 6 108 5.67e-24 101
Msa0164020 AT1G22640.1 44.037 109 59 2 190 296 8 116 5.86e-24 100
Msa0164020 AT5G16770.4 43.810 105 58 1 191 294 9 113 6.21e-24 102
Msa0164020 AT5G16770.3 43.810 105 58 1 191 294 9 113 6.21e-24 102
Msa0164020 AT5G14750.1 45.918 98 52 1 195 291 17 114 6.50e-24 99.0
Msa0164020 AT3G50060.1 35.484 155 79 3 196 350 6 139 6.79e-24 101
Msa0164020 AT5G16770.1 43.810 105 58 1 191 294 9 113 7.78e-24 101
Msa0164020 AT5G16770.2 43.810 105 58 1 191 294 9 113 7.78e-24 101
Msa0164020 AT2G32460.1 46.465 99 52 1 194 291 18 116 7.98e-24 103
Msa0164020 AT2G32460.2 46.465 99 52 1 194 291 6 104 9.11e-24 103
Msa0164020 AT2G39880.1 43.925 107 55 1 196 302 50 151 9.99e-24 102
Msa0164020 AT4G01680.2 36.667 150 75 3 194 330 12 154 1.02e-23 101
Msa0164020 AT5G12870.1 41.880 117 66 2 176 291 1 116 1.09e-23 100
Msa0164020 AT5G40330.1 43.689 103 57 1 190 291 8 110 1.16e-23 98.6
Msa0164020 AT1G17950.1 37.580 157 93 3 196 349 5 159 1.18e-23 99.4
Msa0164020 AT3G23250.1 41.803 122 67 3 194 311 12 133 1.26e-23 100
Msa0164020 AT2G47190.1 30.000 160 110 2 179 336 5 164 1.34e-23 99.8
Msa0164020 AT4G26930.1 45.455 99 53 1 194 291 19 117 1.38e-23 102
Msa0164020 AT1G63910.1 44.762 105 54 2 188 291 9 110 1.70e-23 101
Msa0164020 AT4G33450.1 46.939 98 52 0 190 287 13 110 1.82e-23 99.0
Msa0164020 AT5G65230.1 43.137 102 57 1 191 291 9 110 1.86e-23 100
Msa0164020 AT4G17785.2 39.623 106 63 1 190 294 9 114 1.87e-23 100
Msa0164020 AT4G17785.1 39.623 106 63 1 190 294 9 114 1.95e-23 101
Msa0164020 AT1G26780.1 48.421 95 49 0 196 290 98 192 2.14e-23 99.4
Msa0164020 AT1G26780.2 48.421 95 49 0 196 290 98 192 3.37e-23 100
Msa0164020 AT5G60890.1 47.573 103 53 1 190 291 8 110 3.54e-23 99.4
Msa0164020 AT1G16490.1 40.323 124 71 2 192 312 12 135 3.98e-23 98.6
Msa0164020 AT3G02940.2 43.810 105 58 1 191 294 9 113 6.14e-23 99.0
Msa0164020 AT3G29020.1 47.368 95 50 0 196 290 65 159 7.56e-23 96.7
Msa0164020 AT3G02940.1 43.810 105 58 1 191 294 9 113 8.11e-23 98.6
Msa0164020 AT3G02940.3 43.810 105 58 1 191 294 9 113 8.11e-23 98.6
Msa0164020 AT3G01530.1 42.857 105 59 1 188 291 19 123 8.61e-23 95.9
Msa0164020 AT4G09460.1 46.602 103 53 2 196 296 14 116 8.99e-23 96.7
Msa0164020 AT4G34990.1 37.241 145 83 3 196 339 14 151 1.03e-22 97.4
Msa0164020 AT4G12350.1 42.424 99 56 1 194 291 12 110 1.10e-22 97.4
Msa0164020 AT5G67300.1 48.958 96 49 0 196 291 6 101 1.14e-22 97.8
Msa0164020 AT3G27810.1 44.118 102 56 1 191 291 17 118 1.15e-22 96.3
Msa0164020 AT3G29020.2 47.368 95 50 0 196 290 67 161 1.17e-22 97.8
Msa0164020 AT5G56110.1 44.660 103 56 1 190 291 8 110 1.37e-22 98.2
Msa0164020 AT1G34670.1 43.137 102 57 1 191 291 9 110 1.46e-22 98.6
Msa0164020 AT3G30210.1 36.129 155 91 2 178 331 11 158 1.56e-22 97.1
Msa0164020 AT2G02820.1 44.954 109 57 2 199 304 33 141 1.91e-22 99.4
Msa0164020 AT2G02820.2 44.954 109 57 2 199 304 33 141 1.96e-22 99.8
Msa0164020 AT2G02820.3 44.954 109 57 2 199 304 33 141 2.37e-22 97.4
Msa0164020 AT1G18570.1 44.231 104 57 1 189 291 8 111 2.42e-22 97.8
Msa0164020 AT3G27920.1 43.878 98 54 1 195 291 15 112 2.48e-22 95.1
Msa0164020 AT1G74430.1 41.284 109 63 1 193 300 11 119 4.17e-22 95.5
Msa0164020 AT2G16720.1 37.580 157 81 6 196 348 14 157 4.40e-22 95.5
Msa0164020 AT4G22680.1 43.434 99 55 1 194 291 12 110 4.68e-22 95.5
Msa0164020 AT5G54230.1 44.444 99 54 1 194 291 12 110 6.58e-22 95.9
Msa0164020 AT5G57620.1 42.149 121 66 3 191 307 9 129 6.61e-22 96.3
Msa0164020 AT5G62320.1 43.478 115 56 3 191 296 10 124 1.30e-21 93.6
Msa0164020 AT1G35515.1 40.367 109 63 2 190 296 8 116 1.57e-21 92.4
Msa0164020 AT5G40350.1 42.157 102 58 1 191 291 14 115 1.78e-21 92.4
Msa0164020 AT3G13540.1 29.947 187 119 3 178 361 7 184 2.04e-21 93.2
Msa0164020 AT5G17800.1 46.809 94 50 0 196 289 93 186 2.41e-21 94.4
Msa0164020 AT1G06180.1 38.596 114 68 2 194 305 12 125 2.88e-21 92.8
Msa0164020 AT1G14350.2 44.086 93 52 0 199 291 28 120 3.47e-21 95.5
Msa0164020 AT1G14350.1 44.086 93 52 0 199 291 28 120 3.47e-21 95.5
Msa0164020 AT3G60460.1 42.105 114 64 2 185 296 2 115 4.35e-21 93.2
Msa0164020 AT1G56160.1 41.414 99 57 1 194 291 14 112 4.38e-21 93.2
Msa0164020 AT3G24310.1 41.176 102 59 1 191 291 15 116 4.46e-21 92.8
Msa0164020 AT3G46130.1 41.026 117 67 2 186 301 2 117 4.81e-21 92.4
Msa0164020 AT5G35550.1 40.336 119 67 2 190 304 10 128 5.41e-21 92.0
Msa0164020 AT2G31180.1 41.414 99 57 1 194 291 12 110 5.95e-21 92.0
Msa0164020 AT5G59780.3 40.741 108 63 1 195 301 9 116 1.14e-20 90.9
Msa0164020 AT1G66230.1 42.000 100 55 2 194 291 12 110 1.79e-20 91.3
Msa0164020 AT4G13480.1 38.333 120 70 2 191 309 3 119 1.83e-20 90.9
Msa0164020 AT5G62470.1 40.816 98 58 0 194 291 12 109 2.14e-20 92.4
Msa0164020 AT5G65790.1 41.739 115 63 3 191 301 9 123 2.20e-20 92.4
Msa0164020 AT5G07690.1 43.269 104 58 1 194 296 12 115 2.83e-20 91.7
Msa0164020 AT1G74080.1 40.777 103 60 1 190 291 8 110 3.11e-20 91.7
Msa0164020 AT1G68320.1 39.394 99 59 1 194 291 19 117 3.39e-20 90.5
Msa0164020 AT5G07700.1 45.455 99 53 1 194 291 12 110 4.67e-20 90.9
Msa0164020 AT5G07700.2 45.455 99 53 1 194 291 12 110 4.67e-20 90.9
Msa0164020 AT3G48920.1 41.525 118 65 3 176 291 1 116 5.30e-20 89.4
Msa0164020 AT1G25340.1 41.837 98 56 1 195 291 19 116 8.11e-20 89.4
Msa0164020 AT1G25340.2 33.108 148 90 3 195 337 19 162 8.41e-20 89.4
Msa0164020 AT5G49330.1 41.414 99 57 1 194 291 12 110 9.83e-20 90.1
Msa0164020 AT1G48000.1 42.424 99 56 1 194 291 32 130 1.41e-19 87.8
Msa0164020 AT3G01140.2 35.000 140 79 3 191 327 9 139 1.47e-19 89.7
Msa0164020 AT5G15310.4 40.404 99 58 1 194 291 12 110 1.48e-19 87.8
Msa0164020 AT1G25340.3 42.268 97 52 1 195 291 19 111 1.71e-19 89.0
Msa0164020 AT2G47460.1 39.286 112 65 2 194 302 12 123 1.84e-19 89.7
Msa0164020 AT3G49690.1 40.000 115 65 3 191 301 9 123 1.85e-19 89.0
Msa0164020 AT3G01140.1 35.000 140 79 3 191 327 52 182 1.94e-19 89.7
Msa0164020 AT5G61420.2 43.434 99 55 1 194 291 12 110 1.95e-19 89.7
Msa0164020 AT3G47600.1 35.664 143 82 3 194 335 12 145 2.05e-19 89.0
Msa0164020 AT5G15310.1 40.404 99 58 1 194 291 12 110 2.19e-19 89.0
Msa0164020 AT1G73410.2 44.444 108 59 1 196 302 6 113 2.33e-19 86.3
Msa0164020 AT1G73410.1 44.444 108 59 1 196 302 6 113 2.39e-19 87.0
Msa0164020 AT5G15310.2 40.000 100 59 1 193 291 11 110 2.48e-19 88.6
Msa0164020 AT4G37780.1 34.646 127 73 3 194 318 12 130 2.76e-19 88.2
Msa0164020 AT1G66370.1 41.414 99 57 1 194 291 8 106 2.84e-19 87.0
Msa0164020 AT1G79180.1 29.101 189 126 5 191 372 11 198 2.86e-19 88.2
Msa0164020 AT5G16600.1 43.000 100 54 2 194 291 12 110 5.03e-19 87.8
Msa0164020 AT5G26660.2 51.515 66 32 0 229 294 17 82 5.24e-19 87.8
Msa0164020 AT5G23000.1 40.566 106 61 2 191 294 9 114 5.30e-19 87.8
Msa0164020 AT1G74650.1 41.414 99 57 1 194 291 12 110 5.73e-19 87.8
Msa0164020 AT5G62470.2 40.404 99 58 1 194 291 12 110 6.06e-19 88.2
Msa0164020 AT1G08810.1 40.517 116 67 2 194 307 12 127 7.28e-19 86.7
Msa0164020 AT3G53200.2 45.545 101 50 2 229 324 12 112 7.52e-19 84.7
Msa0164020 AT3G62610.1 41.414 99 57 1 194 291 12 110 8.04e-19 87.4
Msa0164020 AT3G28910.1 39.450 109 64 2 191 297 9 117 1.62e-18 86.3
Msa0164020 AT5G39700.1 38.938 113 65 1 179 291 43 151 1.77e-18 83.6
Msa0164020 AT3G12820.1 38.235 102 62 1 191 291 11 112 1.77e-18 84.7
Msa0164020 AT2G26950.1 34.821 112 64 2 196 302 18 125 2.89e-18 86.3
Msa0164020 AT5G14340.1 37.313 134 74 5 194 325 24 149 3.12e-18 84.7
Msa0164020 AT5G14750.3 50.794 63 31 0 229 291 18 80 4.05e-18 82.0
Msa0164020 AT4G25560.1 42.857 98 55 1 195 291 11 108 4.60e-18 84.3
Msa0164020 AT1G18710.1 32.168 143 81 3 194 335 12 139 6.67e-18 83.6
Msa0164020 AT5G35550.2 48.101 79 38 1 229 304 53 131 1.65e-17 82.4
Msa0164020 AT2G36890.1 38.261 115 68 3 191 302 9 123 1.70e-17 82.8
Msa0164020 AT5G52260.1 43.878 98 54 1 195 291 13 110 2.23e-17 82.0
Msa0164020 AT2G36890.2 38.261 115 68 3 191 302 50 164 2.65e-17 83.2
Msa0164020 AT1G66380.1 40.566 106 62 1 187 291 1 106 3.07e-17 78.6
Msa0164020 AT5G49620.1 36.885 122 73 2 174 291 3 124 6.16e-17 81.6
Msa0164020 AT1G56650.1 42.424 99 56 1 194 291 8 106 2.65e-16 78.6
Msa0164020 AT1G66390.1 41.509 106 61 1 187 291 1 106 3.02e-16 78.6
Msa0164020 AT3G27810.2 49.206 63 32 0 229 291 7 69 5.91e-16 75.9
Msa0164020 AT3G06490.1 37.255 102 63 1 189 289 14 115 1.09e-15 78.2
Msa0164020 AT3G18100.1 40.000 95 57 0 195 289 545 639 1.36e-15 79.7
Msa0164020 AT3G18100.1 35.714 98 61 2 193 289 492 588 2.14e-13 72.8
Msa0164020 AT3G18100.3 40.000 95 57 0 195 289 497 591 1.60e-15 79.3
Msa0164020 AT3G18100.3 35.714 98 61 2 193 289 444 540 2.61e-13 72.4
Msa0164020 AT3G18100.4 40.000 95 57 0 195 289 384 478 1.69e-15 79.0
Msa0164020 AT3G18100.4 35.714 98 61 2 193 289 331 427 3.23e-13 72.0
Msa0164020 AT1G79180.2 31.852 135 58 3 191 291 11 145 1.94e-15 77.4
Msa0164020 AT3G18100.2 40.000 95 57 0 195 289 332 426 2.22e-15 78.6
Msa0164020 AT3G18100.2 35.714 98 61 2 193 289 279 375 3.98e-13 71.6
Msa0164020 AT5G40350.2 47.619 63 33 0 229 291 8 70 3.37e-15 73.6
Msa0164020 AT3G12820.2 47.619 63 33 0 229 291 2 64 1.42e-14 72.4
Msa0164020 AT5G59780.2 42.466 73 42 0 229 301 23 95 1.59e-14 72.8
Msa0164020 AT3G46130.3 42.466 73 42 0 229 301 13 85 4.47e-14 71.6
Msa0164020 AT3G46130.4 42.466 73 42 0 229 301 23 95 4.76e-14 71.6
Msa0164020 AT3G47600.2 36.792 106 58 2 229 334 42 138 1.01e-13 72.4
Msa0164020 AT5G49620.2 33.088 136 73 3 174 291 3 138 1.14e-13 72.0
Msa0164020 AT1G22640.3 42.683 82 36 2 240 319 2 74 1.66e-13 69.3
Msa0164020 AT2G37630.1 37.113 97 58 1 196 289 4 100 4.21e-13 70.9
Msa0164020 AT1G71030.2 42.424 66 37 1 232 296 5 70 1.75e-12 66.2
Msa0164020 AT1G71030.1 42.424 66 37 1 232 296 19 84 2.14e-12 66.2
Msa0164020 AT5G14750.4 48.077 52 27 0 240 291 2 53 2.50e-12 64.7
Msa0164020 AT5G14750.2 48.077 52 27 0 240 291 2 53 2.50e-12 64.7
Msa0164020 AT3G23250.2 42.667 75 40 2 240 311 2 76 4.26e-12 65.9
Msa0164020 AT1G09770.1 35.417 96 61 1 194 289 5 99 7.55e-12 67.8
Msa0164020 AT1G66380.3 50.794 63 31 0 229 291 11 73 1.19e-11 61.6
Msa0164020 AT1G14350.3 49.091 55 28 0 237 291 23 77 1.22e-11 66.2
Msa0164020 AT1G14350.4 49.091 55 28 0 237 291 23 77 1.22e-11 66.2

Find 100 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTATATTGATTGGATTTA+TGG 0.069076 1_4:+42670289 None:intergenic
GTCAAATTGTTGGACTATTC+TGG 0.098803 1_4:-42669621 Msa0164020:CDS
AATAGATAAGGAATTCTTTC+TGG 0.120943 1_4:+42670423 None:intergenic
TAACACAGACATAGGAATTT+TGG 0.161859 1_4:-42670073 Msa0164020:CDS
CTACCACCATCACTAGTTTA+TGG 0.185898 1_4:-42669988 Msa0164020:CDS
TATAACGAACATCCTCTTAA+TGG 0.242646 1_4:-42670273 Msa0164020:CDS
TTTCCTTGATCATGGTCTTC+TGG 0.267693 1_4:+42669958 None:intergenic
TCGGCTTCTTTGTAGCATTC+AGG 0.284488 1_4:+42667969 None:intergenic
AAACAAAATTTCTTTCAATA+TGG 0.288585 1_4:-42670042 Msa0164020:CDS
GGGGTTTGGTTCATTGAAAA+TGG 0.296954 1_4:+42670207 None:intergenic
ACTATTCTGGGTTTAATAAC+TGG 0.310513 1_4:-42669608 Msa0164020:CDS
ATAACGAACATCCTCTTAAT+GGG 0.328090 1_4:-42670272 Msa0164020:CDS
TCAAATTGTTGGACTATTCT+GGG 0.330896 1_4:-42669620 Msa0164020:CDS
AGGATGTTCGTTATATTGAT+TGG 0.335140 1_4:+42670281 None:intergenic
CAACGAAATCACTAATTCTA+AGG 0.335193 1_4:-42667903 Msa0164020:CDS
CCATCTTCGACCAGACATTA+AGG 0.352485 1_4:-42669523 Msa0164020:intron
TAGGATTCTTGTCAAATTGT+TGG 0.357877 1_4:-42669631 Msa0164020:CDS
GGAATTCTTTCTGGAAAACT+TGG 0.361080 1_4:+42670432 None:intergenic
TTCGAACTATTTCGCCGGTT+CGG 0.368111 1_4:+42667950 None:intergenic
GCTTCCATTTCGTTATAGTT+TGG 0.371231 1_4:+42670111 None:intergenic
GAAATTGCAAAGAGACTTCC+TGG 0.380134 1_4:-42668040 Msa0164020:CDS
TAGTTTGGTGTAAAGGTCAT+TGG 0.380184 1_4:+42670126 None:intergenic
TTCGTTATAGTTTGGTGTAA+AGG 0.392484 1_4:+42670119 None:intergenic
CAGTCGTGTGTGAAGGGGTT+TGG 0.394794 1_4:+42670193 None:intergenic
CTTGATCATGGTCTTCTGGT+TGG 0.397795 1_4:+42669962 None:intergenic
AGAACCAGTGCGGGGATCTC+TGG 0.402224 1_4:+42670369 None:intergenic
GAGTGTGGTGTTAACTTTGA+AGG 0.412449 1_4:-42667767 Msa0164020:CDS
GTTCATTGAAAATGGTTTGA+TGG 0.412683 1_4:+42670215 None:intergenic
ATCGAAGCTCACAAGATAGT+TGG 0.429234 1_4:-42668076 Msa0164020:CDS
TGGTGTTAACTTTGAAGGTT+TGG 0.435659 1_4:-42667762 Msa0164020:CDS
GATGGAATGGCAAGTGGCTC+TGG 0.437517 1_4:-42667686 Msa0164020:CDS
GAAAATGGTTTGATGGAAGA+AGG 0.438315 1_4:+42670222 None:intergenic
GGTGAACCATCACACTTCTA+TGG 0.445255 1_4:-42670250 Msa0164020:CDS
CTCAATGTTCATTATGTTGG+TGG 0.446836 1_4:+42667856 None:intergenic
TGAGAATGTTTCCTTGATCA+TGG 0.451402 1_4:+42669950 None:intergenic
CAGATTGCTAAGTTTATGAA+TGG 0.462207 1_4:-42669582 Msa0164020:CDS
TACACCAAACTATAACGAAA+TGG 0.464173 1_4:-42670115 Msa0164020:CDS
AAAGAATCCAATATAAGAAA+AGG 0.468148 1_4:-42669877 Msa0164020:CDS
AAATTCCTATGTCTGTGTTA+AGG 0.470611 1_4:+42670076 None:intergenic
ACTAAGACCAGGGTTGGTAT+AGG 0.478065 1_4:+42667811 None:intergenic
TGAGATTGGATCATATCAAA+TGG 0.487289 1_4:-42667651 Msa0164020:CDS
TGACCAGATGCGACAAAAGA+AGG 0.489767 1_4:-42669926 Msa0164020:CDS
AAATTCGCTCTGGGTTCCAT+TGG 0.492788 1_4:+42670164 None:intergenic
GGCACAATGAGTCATGAGAT+TGG 0.496501 1_4:-42667665 Msa0164020:CDS
GTTACTTCAGTGGAAGAACT+TGG 0.499219 1_4:-42667740 Msa0164020:CDS
ATACTCAATGTTCATTATGT+TGG 0.501812 1_4:+42667853 None:intergenic
ATGCTACAAAGAAGCCGAAC+CGG 0.502022 1_4:-42667964 Msa0164020:CDS
TGATGGTTCACCCCATTAAG+AGG 0.503375 1_4:+42670261 None:intergenic
AGCATTCAGGCTGCGCTTAG+CGG 0.505773 1_4:+42667982 None:intergenic
GGAGTTCCAACGGTTCTTGA+CGG 0.518211 1_4:+42668003 None:intergenic
TCGAAGCTCACAAGATAGTT+GGG 0.518710 1_4:-42668075 Msa0164020:CDS
TGCGCTTAGCGGAGTTCCAA+CGG 0.521912 1_4:+42667993 None:intergenic
GGTTGCAAGAGAACCAGTGC+GGG 0.524586 1_4:+42670360 None:intergenic
ATGATGTTGAATGGTGAAGA+TGG 0.527607 1_4:-42667704 Msa0164020:CDS
TGTTTGCAGTCGTGTGTGAA+GGG 0.529971 1_4:+42670187 None:intergenic
GTGTTTGCAGTCGTGTGTGA+AGG 0.531790 1_4:+42670186 None:intergenic
GCAGAAGCGGAAAACAGTGC+AGG 0.534925 1_4:-42669560 Msa0164020:CDS
CAATGGACTCATGATGAGGA+TGG 0.537412 1_4:-42669853 Msa0164020:CDS
CCTTAATGTCTGGTCGAAGA+TGG 0.543915 1_4:+42669523 None:intergenic
GAAAGAGTCATGGAGTGAAG+AGG 0.545656 1_4:-42668113 Msa0164020:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.549730 1_4:-42669551 Msa0164020:CDS
CAACCAGAAGACCATGATCA+AGG 0.554133 1_4:-42669961 Msa0164020:CDS
CATCCTCATCATGAGTCCAT+TGG 0.559323 1_4:+42669854 None:intergenic
CACACGACTGCAAACACCAA+TGG 0.561905 1_4:-42670180 Msa0164020:CDS
TTCCTTTCGAACTATTTCGC+CGG 0.564862 1_4:+42667945 None:intergenic
TGAAGGTTTGGTTACTTCAG+TGG 0.567178 1_4:-42667750 Msa0164020:CDS
AACATCACTAAGACCAGGGT+TGG 0.571044 1_4:+42667805 None:intergenic
CCAATATAAGAAAAGGCCAA+TGG 0.575615 1_4:-42669870 Msa0164020:CDS
ACGGAGTTCTCAGTACGTCC+AGG 0.575760 1_4:+42668022 None:intergenic
AACTAGTGATGGTGGTAGAG+AGG 0.582236 1_4:+42669993 None:intergenic
AAGTTTATGAATGGCAGAAG+CGG 0.586961 1_4:-42669573 Msa0164020:CDS
AATGTGACAATGATGTTGAA+TGG 0.588727 1_4:-42667713 Msa0164020:CDS
GACCTCCTTAACACAGACAT+AGG 0.592422 1_4:-42670081 Msa0164020:CDS
CGATATGAAATTTCTGAGTG+TGG 0.592948 1_4:-42667782 Msa0164020:CDS
AAAACCAGAGATCCCCGCAC+TGG 0.593457 1_4:-42670373 Msa0164020:CDS
AGAACTCCGTCAAGAACCGT+TGG 0.593655 1_4:-42668009 Msa0164020:CDS
TCAGTGTAATTAGATGGTGC+AGG 0.594633 1_4:+42670321 None:intergenic
AACCGGCGAAATAGTTCGAA+AGG 0.596875 1_4:-42667947 Msa0164020:CDS
TAATTCTAAGGATGTTCAGA+AGG 0.597329 1_4:-42667891 Msa0164020:CDS
GACAATACCTATACCAACCC+TGG 0.599796 1_4:-42667818 Msa0164020:CDS
TGGTTTCCATAAACTAGTGA+TGG 0.599953 1_4:+42669982 None:intergenic
CAGAAGCGGAAAACAGTGCA+GGG 0.604822 1_4:-42669559 Msa0164020:CDS
TTCCTATGTCTGTGTTAAGG+AGG 0.604840 1_4:+42670079 None:intergenic
TTCTATAGATCATTAACATG+AGG 0.610339 1_4:+42667620 None:intergenic
TATTAATGTAGAAAGAGTCA+TGG 0.610785 1_4:-42668123 Msa0164020:intron
ATCGAACATCACTAAGACCA+GGG 0.610910 1_4:+42667801 None:intergenic
GTTGAATGGTGAAGATGGAA+TGG 0.611744 1_4:-42667699 Msa0164020:CDS
AATGGACTCATGATGAGGAT+GGG 0.612122 1_4:-42669852 Msa0164020:intron
TGTGTTAAGGAGGTCATGCA+TGG 0.620072 1_4:+42670089 None:intergenic
TTTCCATAAACTAGTGATGG+TGG 0.621844 1_4:+42669985 None:intergenic
GAACTACCATAGAAGTGTGA+TGG 0.625518 1_4:+42670244 None:intergenic
ACTTCAGTGGAAGAACTTGG+TGG 0.628454 1_4:-42667737 Msa0164020:CDS
TATCGAACATCACTAAGACC+AGG 0.629276 1_4:+42667800 None:intergenic
GTTTGCAGTCGTGTGTGAAG+GGG 0.634927 1_4:+42670188 None:intergenic
AGGCCAATGGACTCATGATG+AGG 0.644622 1_4:-42669857 Msa0164020:CDS
TAACGAACATCCTCTTAATG+GGG 0.668773 1_4:-42670271 Msa0164020:CDS
GGTGAAGATGGAATGGCAAG+TGG 0.673653 1_4:-42667692 Msa0164020:CDS
GCAGGTGTAAGAGTAGAACT+TGG 0.695950 1_4:+42670339 None:intergenic
TGGTTGCAAGAGAACCAGTG+CGG 0.712881 1_4:+42670359 None:intergenic
GTTGCAAGAGAACCAGTGCG+GGG 0.724060 1_4:+42670361 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCATTTGTATTTTTTAAAA+AGG + chr1_4:42669489-42669508 None:intergenic 10.0%
!!! CTATTTTAGATAAAAAAAAA+AGG - chr1_4:42669772-42669791 Msa0164020:intron 10.0%
!!! ATATTGAAAGAAATTTTGTT+TGG + chr1_4:42668025-42668044 None:intergenic 15.0%
!! AAACAAAATTTCTTTCAATA+TGG - chr1_4:42668024-42668043 Msa0164020:CDS 15.0%
!!! CATTACTATAAAATATTTTC+AGG - chr1_4:42668266-42668285 Msa0164020:intron 15.0%
!! AATCAAAAAATTAAGAATGT+TGG - chr1_4:42668666-42668685 Msa0164020:intron 15.0%
!!! GAACACTTTTTTTTTATAAA+TGG + chr1_4:42669371-42669390 None:intergenic 15.0%
!! AATTAACCAAAATAAGAAAT+CGG + chr1_4:42669648-42669667 None:intergenic 15.0%
!! AACATATATGATAATATGAA+AGG + chr1_4:42669720-42669739 None:intergenic 15.0%
!!! GGAAAATTTTCAAATAGATA+AGG + chr1_4:42667658-42667677 None:intergenic 20.0%
!! AAAAAATCAGTGTAATTAGA+TGG + chr1_4:42667754-42667773 None:intergenic 20.0%
!! AAAGAATCCAATATAAGAAA+AGG - chr1_4:42668189-42668208 Msa0164020:intron 20.0%
!!! TAAAATATTTTCAGGTTCTT+AGG - chr1_4:42668274-42668293 Msa0164020:intron 20.0%
!!! AAAATATTTTCAGGTTCTTA+GGG - chr1_4:42668275-42668294 Msa0164020:intron 20.0%
!!! TATGTATTTATGTGAGTTTT+AGG + chr1_4:42668855-42668874 None:intergenic 20.0%
!!! TTTGGTTAATTTTGAACAAA+TGG - chr1_4:42669657-42669676 Msa0164020:intron 20.0%
!! TAATCTAGACATATATTGTT+TGG - chr1_4:42669920-42669939 Msa0164020:CDS 20.0%
! AATAGATAAGGAATTCTTTC+TGG + chr1_4:42667646-42667665 None:intergenic 25.0%
!! CGTTATATTGATTGGATTTA+TGG + chr1_4:42667780-42667799 None:intergenic 25.0%
!!! GGATTTGTTATATACTCTAT+TGG - chr1_4:42668299-42668318 Msa0164020:intron 25.0%
!! TCTTTTTCTTCAATCCTTTT+AGG - chr1_4:42668568-42668587 Msa0164020:intron 25.0%
! ATTTGTACTTGCAAAAAGTA+CGG + chr1_4:42669018-42669037 None:intergenic 25.0%
! AATGCATATCAATTTAATGC+AGG - chr1_4:42669035-42669054 Msa0164020:intron 25.0%
! TTATGATACATGCTCTTAAA+TGG + chr1_4:42669302-42669321 None:intergenic 25.0%
! AAAATCACTGAAGATACTTA+TGG + chr1_4:42669573-42669592 None:intergenic 25.0%
!!! CTATTTGTTTTTGCAAATGA+GGG + chr1_4:42669815-42669834 None:intergenic 25.0%
!!! TCTATTTGTTTTTGCAAATG+AGG + chr1_4:42669816-42669835 None:intergenic 25.0%
! AGATTTCAATTTCACTAATC+TGG + chr1_4:42669875-42669894 None:intergenic 25.0%
! TATTAATGTAGAAAGAGTCA+TGG - chr1_4:42669943-42669962 Msa0164020:CDS 25.0%
!!! ATTATGTTGGTGGAATTTTT+TGG + chr1_4:42670203-42670222 None:intergenic 25.0%
! ATACTCAATGTTCATTATGT+TGG + chr1_4:42670216-42670235 None:intergenic 25.0%
!! GGTTTTTCTAGAGGAATTTT+AGG + chr1_4:42667679-42667698 None:intergenic 30.0%
AGGATGTTCGTTATATTGAT+TGG + chr1_4:42667788-42667807 None:intergenic 30.0%
TATAACGAACATCCTCTTAA+TGG - chr1_4:42667793-42667812 Msa0164020:CDS 30.0%
ATAACGAACATCCTCTTAAT+GGG - chr1_4:42667794-42667813 Msa0164020:CDS 30.0%
GTTCATTGAAAATGGTTTGA+TGG + chr1_4:42667854-42667873 None:intergenic 30.0%
!! TTCGTTATAGTTTGGTGTAA+AGG + chr1_4:42667950-42667969 None:intergenic 30.0%
TACACCAAACTATAACGAAA+TGG - chr1_4:42667951-42667970 Msa0164020:CDS 30.0%
AAATTCCTATGTCTGTGTTA+AGG + chr1_4:42667993-42668012 None:intergenic 30.0%
! TAACACAGACATAGGAATTT+TGG - chr1_4:42667993-42668012 Msa0164020:CDS 30.0%
!! ACTCTATTGGTTCAATTTGA+TGG - chr1_4:42668312-42668331 Msa0164020:intron 30.0%
TAGGATTCTTGTCAAATTGT+TGG - chr1_4:42668435-42668454 Msa0164020:intron 30.0%
TCAAATTGTTGGACTATTCT+GGG - chr1_4:42668446-42668465 Msa0164020:intron 30.0%
ACTATTCTGGGTTTAATAAC+TGG - chr1_4:42668458-42668477 Msa0164020:intron 30.0%
CAGATTGCTAAGTTTATGAA+TGG - chr1_4:42668484-42668503 Msa0164020:intron 30.0%
GTAAGAGATAAAAGCCTAAA+AGG + chr1_4:42668585-42668604 None:intergenic 30.0%
!!! GTATTTATGTGAGTTTTAGG+CGG + chr1_4:42668852-42668871 None:intergenic 30.0%
! ATAGATATGCCATTTATCAC+TGG - chr1_4:42669507-42669526 Msa0164020:intron 30.0%
! TTTTGTTCTCCAGTGATAAA+TGG + chr1_4:42669519-42669538 None:intergenic 30.0%
AGATACTTATGGATAAAGCA+TGG + chr1_4:42669562-42669581 None:intergenic 30.0%
!!! TCCTTACCGATTTCTTATTT+TGG - chr1_4:42669639-42669658 Msa0164020:intron 30.0%
ACCAAAATAAGAAATCGGTA+AGG + chr1_4:42669643-42669662 None:intergenic 30.0%
CAACGAAATCACTAATTCTA+AGG - chr1_4:42670163-42670182 Msa0164020:CDS 30.0%
! TAATTCTAAGGATGTTCAGA+AGG - chr1_4:42670175-42670194 Msa0164020:CDS 30.0%
AATGTGACAATGATGTTGAA+TGG - chr1_4:42670353-42670372 Msa0164020:CDS 30.0%
TGAGATTGGATCATATCAAA+TGG - chr1_4:42670415-42670434 Msa0164020:CDS 30.0%
! GGAATTCTTTCTGGAAAACT+TGG + chr1_4:42667637-42667656 None:intergenic 35.0%
TAACGAACATCCTCTTAATG+GGG - chr1_4:42667795-42667814 Msa0164020:CDS 35.0%
GAAAATGGTTTGATGGAAGA+AGG + chr1_4:42667847-42667866 None:intergenic 35.0%
ATCGATGAAAAATTCGCTCT+GGG + chr1_4:42667914-42667933 None:intergenic 35.0%
!! TAGTTTGGTGTAAAGGTCAT+TGG + chr1_4:42667943-42667962 None:intergenic 35.0%
GCTTCCATTTCGTTATAGTT+TGG + chr1_4:42667958-42667977 None:intergenic 35.0%
TTTCCATAAACTAGTGATGG+TGG + chr1_4:42668084-42668103 None:intergenic 35.0%
TGGTTTCCATAAACTAGTGA+TGG + chr1_4:42668087-42668106 None:intergenic 35.0%
TGAGAATGTTTCCTTGATCA+TGG + chr1_4:42668119-42668138 None:intergenic 35.0%
!!! CCATTGGCCTTTTCTTATAT+TGG + chr1_4:42668199-42668218 None:intergenic 35.0%
CCAATATAAGAAAAGGCCAA+TGG - chr1_4:42668196-42668215 Msa0164020:intron 35.0%
!!! ATATTTTCAGGTTCTTAGGG+TGG - chr1_4:42668278-42668297 Msa0164020:intron 35.0%
GTCAAATTGTTGGACTATTC+TGG - chr1_4:42668445-42668464 Msa0164020:intron 35.0%
AAGTTTATGAATGGCAGAAG+CGG - chr1_4:42668493-42668512 Msa0164020:intron 35.0%
GAAAAAGACACCTTAATGTC+TGG + chr1_4:42668556-42668575 None:intergenic 35.0%
ACATAAATACCCCTGTTACT+TGG - chr1_4:42668870-42668889 Msa0164020:intron 35.0%
TACTTGGTTTCCAAGTAACA+GGG + chr1_4:42668883-42668902 None:intergenic 35.0%
TTACTTGGTTTCCAAGTAAC+AGG + chr1_4:42668884-42668903 None:intergenic 35.0%
AGGCTATAAATACCACTCTT+GGG - chr1_4:42668924-42668943 Msa0164020:intron 35.0%
! ACTTGCAAAAAGTACGGTAA+GGG + chr1_4:42669012-42669031 None:intergenic 35.0%
! TACTTGCAAAAAGTACGGTA+AGG + chr1_4:42669013-42669032 None:intergenic 35.0%
GGATAAAGCATGGATACATA+TGG + chr1_4:42669552-42669571 None:intergenic 35.0%
! TGAAAGGAGAAGCGTAAAAA+CGG + chr1_4:42669704-42669723 None:intergenic 35.0%
CTCAATGTTCATTATGTTGG+TGG + chr1_4:42670213-42670232 None:intergenic 35.0%
CGATATGAAATTTCTGAGTG+TGG - chr1_4:42670284-42670303 Msa0164020:CDS 35.0%
! TGGTGTTAACTTTGAAGGTT+TGG - chr1_4:42670304-42670323 Msa0164020:CDS 35.0%
ATGATGTTGAATGGTGAAGA+TGG - chr1_4:42670362-42670381 Msa0164020:CDS 35.0%
TCAGTGTAATTAGATGGTGC+AGG + chr1_4:42667748-42667767 None:intergenic 40.0%
! GAACTACCATAGAAGTGTGA+TGG + chr1_4:42667825-42667844 None:intergenic 40.0%
! GGGGTTTGGTTCATTGAAAA+TGG + chr1_4:42667862-42667881 None:intergenic 40.0%
GATCGATGAAAAATTCGCTC+TGG + chr1_4:42667915-42667934 None:intergenic 40.0%
TTCCTATGTCTGTGTTAAGG+AGG + chr1_4:42667990-42668009 None:intergenic 40.0%
! CTACCACCATCACTAGTTTA+TGG - chr1_4:42668078-42668097 Msa0164020:CDS 40.0%
TTTCCTTGATCATGGTCTTC+TGG + chr1_4:42668111-42668130 None:intergenic 40.0%
! AATGGACTCATGATGAGGAT+GGG - chr1_4:42668214-42668233 Msa0164020:intron 40.0%
TGGACCGTCATAATATTCCT+AGG - chr1_4:42668686-42668705 Msa0164020:intron 40.0%
GGACCGTCATAATATTCCTA+GGG - chr1_4:42668687-42668706 Msa0164020:intron 40.0%
GGACCCTAGGAATATTATGA+CGG + chr1_4:42668693-42668712 None:intergenic 40.0%
!!! AGTTTTAGGCGGTTTCTAGA+AGG + chr1_4:42668841-42668860 None:intergenic 40.0%
ACTTGGTTTCCAAGTAACAG+GGG + chr1_4:42668882-42668901 None:intergenic 40.0%
CAGGCTATAAATACCACTCT+TGG - chr1_4:42668923-42668942 Msa0164020:intron 40.0%
AAGTACGGTAAGGGATTCTA+GGG + chr1_4:42669003-42669022 None:intergenic 40.0%
AAAGTACGGTAAGGGATTCT+AGG + chr1_4:42669004-42669023 None:intergenic 40.0%
! GAAAGGAGAAGCGTAAAAAC+GGG + chr1_4:42669703-42669722 None:intergenic 40.0%
ATCGAAGCTCACAAGATAGT+TGG - chr1_4:42669990-42670009 Msa0164020:CDS 40.0%
TCGAAGCTCACAAGATAGTT+GGG - chr1_4:42669991-42670010 Msa0164020:CDS 40.0%
GAAATTGCAAAGAGACTTCC+TGG - chr1_4:42670026-42670045 Msa0164020:CDS 40.0%
TTCCTTTCGAACTATTTCGC+CGG + chr1_4:42670124-42670143 None:intergenic 40.0%
ATCGAACATCACTAAGACCA+GGG + chr1_4:42670268-42670287 None:intergenic 40.0%
TATCGAACATCACTAAGACC+AGG + chr1_4:42670269-42670288 None:intergenic 40.0%
! GAGTGTGGTGTTAACTTTGA+AGG - chr1_4:42670299-42670318 Msa0164020:CDS 40.0%
! TGAAGGTTTGGTTACTTCAG+TGG - chr1_4:42670316-42670335 Msa0164020:CDS 40.0%
GTTACTTCAGTGGAAGAACT+TGG - chr1_4:42670326-42670345 Msa0164020:CDS 40.0%
GTTGAATGGTGAAGATGGAA+TGG - chr1_4:42670367-42670386 Msa0164020:CDS 40.0%
!!! GGGATCTCTGGTTTTTCTAG+AGG + chr1_4:42667688-42667707 None:intergenic 45.0%
GCAGGTGTAAGAGTAGAACT+TGG + chr1_4:42667730-42667749 None:intergenic 45.0%
TGATGGTTCACCCCATTAAG+AGG + chr1_4:42667808-42667827 None:intergenic 45.0%
GGTGAACCATCACACTTCTA+TGG - chr1_4:42667816-42667835 Msa0164020:CDS 45.0%
TGTTTGCAGTCGTGTGTGAA+GGG + chr1_4:42667882-42667901 None:intergenic 45.0%
! AAATTCGCTCTGGGTTCCAT+TGG + chr1_4:42667905-42667924 None:intergenic 45.0%
TGTGTTAAGGAGGTCATGCA+TGG + chr1_4:42667980-42667999 None:intergenic 45.0%
GACCTCCTTAACACAGACAT+AGG - chr1_4:42667985-42668004 Msa0164020:CDS 45.0%
!! AACTAGTGATGGTGGTAGAG+AGG + chr1_4:42668076-42668095 None:intergenic 45.0%
CTTGATCATGGTCTTCTGGT+TGG + chr1_4:42668107-42668126 None:intergenic 45.0%
CAACCAGAAGACCATGATCA+AGG - chr1_4:42668105-42668124 Msa0164020:CDS 45.0%
TGACCAGATGCGACAAAAGA+AGG - chr1_4:42668140-42668159 Msa0164020:intron 45.0%
! GAACCTTCTTTTGTCGCATC+TGG + chr1_4:42668146-42668165 None:intergenic 45.0%
CATCCTCATCATGAGTCCAT+TGG + chr1_4:42668215-42668234 None:intergenic 45.0%
! CAATGGACTCATGATGAGGA+TGG - chr1_4:42668213-42668232 Msa0164020:intron 45.0%
CCTTAATGTCTGGTCGAAGA+TGG + chr1_4:42668546-42668565 None:intergenic 45.0%
CCATCTTCGACCAGACATTA+AGG - chr1_4:42668543-42668562 Msa0164020:intron 45.0%
TGGTATTTATAGCCTGCCGT+GGG + chr1_4:42668919-42668938 None:intergenic 45.0%
GACTGATGATTCGATCCCTT+GGG + chr1_4:42668956-42668975 None:intergenic 45.0%
AGACTGATGATTCGATCCCT+TGG + chr1_4:42668957-42668976 None:intergenic 45.0%
GGGTTCAGAATCGTATGCTA+GGG + chr1_4:42668983-42669002 None:intergenic 45.0%
AGGGTTCAGAATCGTATGCT+AGG + chr1_4:42668984-42669003 None:intergenic 45.0%
GAAAGAGTCATGGAGTGAAG+AGG - chr1_4:42669953-42669972 Msa0164020:CDS 45.0%
TCGGCTTCTTTGTAGCATTC+AGG + chr1_4:42670100-42670119 None:intergenic 45.0%
ATGCTACAAAGAAGCCGAAC+CGG - chr1_4:42670102-42670121 Msa0164020:CDS 45.0%
! TTCGAACTATTTCGCCGGTT+CGG + chr1_4:42670119-42670138 None:intergenic 45.0%
AACCGGCGAAATAGTTCGAA+AGG - chr1_4:42670119-42670138 Msa0164020:CDS 45.0%
GACAATACCTATACCAACCC+TGG - chr1_4:42670248-42670267 Msa0164020:CDS 45.0%
!! ACTAAGACCAGGGTTGGTAT+AGG + chr1_4:42670258-42670277 None:intergenic 45.0%
AACATCACTAAGACCAGGGT+TGG + chr1_4:42670264-42670283 None:intergenic 45.0%
ACTTCAGTGGAAGAACTTGG+TGG - chr1_4:42670329-42670348 Msa0164020:CDS 45.0%
GGCACAATGAGTCATGAGAT+TGG - chr1_4:42670401-42670420 Msa0164020:CDS 45.0%
!!! AATAATTTTTTTATTTTTGT+AGG - chr1_4:42668416-42668435 Msa0164020:intron 5.0%
!!! TTTTTTTTTGAAAAAATATT+TGG - chr1_4:42669593-42669612 Msa0164020:CDS 5.0%
TGGTTGCAAGAGAACCAGTG+CGG + chr1_4:42667710-42667729 None:intergenic 50.0%
GTTTGCAGTCGTGTGTGAAG+GGG + chr1_4:42667881-42667900 None:intergenic 50.0%
GTGTTTGCAGTCGTGTGTGA+AGG + chr1_4:42667883-42667902 None:intergenic 50.0%
CACACGACTGCAAACACCAA+TGG - chr1_4:42667886-42667905 Msa0164020:CDS 50.0%
! AGGCCAATGGACTCATGATG+AGG - chr1_4:42668209-42668228 Msa0164020:intron 50.0%
CAGAAGCGGAAAACAGTGCA+GGG - chr1_4:42668507-42668526 Msa0164020:intron 50.0%
GAAAACAGTGCAGGGAGAGA+TGG - chr1_4:42668515-42668534 Msa0164020:intron 50.0%
! AGTCCTTCTGGAGGTCTTCT+AGG + chr1_4:42668714-42668733 None:intergenic 50.0%
AGGACTCCGAAACCTCCTTA+AGG - chr1_4:42668728-42668747 Msa0164020:intron 50.0%
GGACTCCGAAACCTCCTTAA+GGG - chr1_4:42668729-42668748 Msa0164020:intron 50.0%
GACTCCGAAACCTCCTTAAG+GGG - chr1_4:42668730-42668749 Msa0164020:intron 50.0%
TACGCCCCTTAAGGAGGTTT+CGG + chr1_4:42668737-42668756 None:intergenic 50.0%
! GCGGTTTCTAGAAGGCCAAT+GGG + chr1_4:42668833-42668852 None:intergenic 50.0%
GTGGTATTTATAGCCTGCCG+TGG + chr1_4:42668920-42668939 None:intergenic 50.0%
!! ACTCTTGGGAGCATTCCCAA+GGG - chr1_4:42668938-42668957 Msa0164020:intron 50.0%
AGAACTCCGTCAAGAACCGT+TGG - chr1_4:42670057-42670076 Msa0164020:CDS 50.0%
GGAGTTCCAACGGTTCTTGA+CGG + chr1_4:42670066-42670085 None:intergenic 50.0%
GGTGAAGATGGAATGGCAAG+TGG - chr1_4:42670374-42670393 Msa0164020:CDS 50.0%
AAAACCAGAGATCCCCGCAC+TGG - chr1_4:42667693-42667712 Msa0164020:CDS 55.0%
GTTGCAAGAGAACCAGTGCG+GGG + chr1_4:42667708-42667727 None:intergenic 55.0%
GGTTGCAAGAGAACCAGTGC+GGG + chr1_4:42667709-42667728 None:intergenic 55.0%
CAGTCGTGTGTGAAGGGGTT+TGG + chr1_4:42667876-42667895 None:intergenic 55.0%
GCAGAAGCGGAAAACAGTGC+AGG - chr1_4:42668506-42668525 Msa0164020:intron 55.0%
!! TGGAGGTCTTCTAGGACCCT+AGG + chr1_4:42668706-42668725 None:intergenic 55.0%
GGTCCTAGAAGACCTCCAGA+AGG - chr1_4:42668708-42668727 Msa0164020:intron 55.0%
AGGTTTCGGAGTCCTTCTGG+AGG + chr1_4:42668723-42668742 None:intergenic 55.0%
AGGAGGTTTCGGAGTCCTTC+TGG + chr1_4:42668726-42668745 None:intergenic 55.0%
! TAGAGCCTCCAGAAGGGCAT+GGG - chr1_4:42668755-42668774 Msa0164020:intron 55.0%
!! TGCTAAAGGCGTTGGCCCAT+TGG - chr1_4:42668815-42668834 Msa0164020:intron 55.0%
! GGCGGTTTCTAGAAGGCCAA+TGG + chr1_4:42668834-42668853 None:intergenic 55.0%
! GGGCTTGGGCTTTGGTTACT+TGG + chr1_4:42668899-42668918 None:intergenic 55.0%
GTAACCAAAGCCCAAGCCCA+CGG - chr1_4:42668900-42668919 Msa0164020:intron 55.0%
TTATAGCCTGCCGTGGGCTT+GGG + chr1_4:42668913-42668932 None:intergenic 55.0%
TTTATAGCCTGCCGTGGGCT+TGG + chr1_4:42668914-42668933 None:intergenic 55.0%
CTTGGGAATGCTCCCAAGAG+TGG + chr1_4:42668939-42668958 None:intergenic 55.0%
!! CACTCTTGGGAGCATTCCCA+AGG - chr1_4:42668937-42668956 Msa0164020:intron 55.0%
ACGGAGTTCTCAGTACGTCC+AGG + chr1_4:42670047-42670066 None:intergenic 55.0%
TGCGCTTAGCGGAGTTCCAA+CGG + chr1_4:42670076-42670095 None:intergenic 55.0%
AGCATTCAGGCTGCGCTTAG+CGG + chr1_4:42670087-42670106 None:intergenic 55.0%
GATGGAATGGCAAGTGGCTC+TGG - chr1_4:42670380-42670399 Msa0164020:CDS 55.0%
AGAACCAGTGCGGGGATCTC+TGG + chr1_4:42667700-42667719 None:intergenic 60.0%
AGGCTCTACGCCCCTTAAGG+AGG + chr1_4:42668743-42668762 None:intergenic 60.0%
TGGAGGCTCTACGCCCCTTA+AGG + chr1_4:42668746-42668765 None:intergenic 60.0%
GTAGAGCCTCCAGAAGGGCA+TGG - chr1_4:42668754-42668773 Msa0164020:intron 60.0%
! AGGGGCGTAGAGCCTCCAGA+AGG - chr1_4:42668748-42668767 Msa0164020:intron 65.0%
GGGGCGTAGAGCCTCCAGAA+GGG - chr1_4:42668749-42668768 Msa0164020:intron 65.0%
CCATGGGGGGTCCTTCTGGA+GGG + chr1_4:42668783-42668802 None:intergenic 65.0%
! GCGCGCTCTGCTAAAGGCGT+TGG - chr1_4:42668807-42668826 Msa0164020:intron 65.0%
CCCTCCAGAAGGACCCCCCA+TGG - chr1_4:42668780-42668799 Msa0164020:intron 70.0%
GCCATGGGGGGTCCTTCTGG+AGG + chr1_4:42668784-42668803 None:intergenic 70.0%
CAGGCCATGGGGGGTCCTTC+TGG + chr1_4:42668787-42668806 None:intergenic 70.0%
CAGAAGGACCCCCCATGGCC+TGG - chr1_4:42668785-42668804 Msa0164020:intron 70.0%
AGCAGAGCGCGCCAGGCCAT+GGG + chr1_4:42668799-42668818 None:intergenic 70.0%
TAGCAGAGCGCGCCAGGCCA+TGG + chr1_4:42668800-42668819 None:intergenic 70.0%
GGCCTGGCGCGCTCTGCTAA+AGG - chr1_4:42668801-42668820 Msa0164020:intron 70.0%
CGCCTTTAGCAGAGCGCGCC+AGG + chr1_4:42668806-42668825 None:intergenic 70.0%
CCTGCCGTGGGCTTGGGCTT+TGG + chr1_4:42668907-42668926 None:intergenic 70.0%
CCAAAGCCCAAGCCCACGGC+AGG - chr1_4:42668904-42668923 Msa0164020:intron 70.0%
GGGCGCCCATGCCCTTCTGG+AGG + chr1_4:42668763-42668782 None:intergenic 75.0%
!! GGAGGGCGCCCATGCCCTTC+TGG + chr1_4:42668766-42668785 None:intergenic 75.0%
GGGCATGGGCGCCCTCCAGA+AGG - chr1_4:42668769-42668788 Msa0164020:intron 75.0%
AGAGCGCGCCAGGCCATGGG+GGG + chr1_4:42668796-42668815 None:intergenic 75.0%
CAGAGCGCGCCAGGCCATGG+GGG + chr1_4:42668797-42668816 None:intergenic 75.0%
GCAGAGCGCGCCAGGCCATG+GGG + chr1_4:42668798-42668817 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 42667622 42670466 42667622 ID=Msa0164020;Name=Msa0164020
chr1_4 mRNA 42667622 42670466 42667622 ID=Msa0164020-mRNA-1;Parent=Msa0164020;Name=Msa0164020-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|417
chr1_4 exon 42669853 42670466 42669853 ID=Msa0164020-mRNA-1:exon:12320;Parent=Msa0164020-mRNA-1
chr1_4 exon 42669524 42669650 42669524 ID=Msa0164020-mRNA-1:exon:12319;Parent=Msa0164020-mRNA-1
chr1_4 exon 42667622 42668134 42667622 ID=Msa0164020-mRNA-1:exon:12318;Parent=Msa0164020-mRNA-1
chr1_4 CDS 42669853 42670466 42669853 ID=Msa0164020-mRNA-1:cds;Parent=Msa0164020-mRNA-1
chr1_4 CDS 42669524 42669650 42669524 ID=Msa0164020-mRNA-1:cds;Parent=Msa0164020-mRNA-1
chr1_4 CDS 42667622 42668134 42667622 ID=Msa0164020-mRNA-1:cds;Parent=Msa0164020-mRNA-1
Gene Sequence

>Msa0164020

ATGGAATTAGATCCAAGTTTTCCAGAAAGAATTCCTTATCTATTTGAAAATTTTCCTAAAATTCCTCTAGAAAAACCAGAGATCCCCGCACTGGTTCTCTTGCAACCAAGTTCTACTCTTACACCTGCACCATCTAATTACACTGATTTTTTGTACCATAAATCCAATCAATATAACGAACATCCTCTTAATGGGGTGAACCATCACACTTCTATGGTAGTTCCTTCTTCCATCAAACCATTTTCAATGAACCAAACCCCTTCACACACGACTGCAAACACCAATGGAACCCAGAGCGAATTTTTCATCGATCAAAATCCAATGACCTTTACACCAAACTATAACGAAATGGAAGCCATGCATGACCTCCTTAACACAGACATAGGAATTTTGGATTTGTCCAAACAAAATTTCTTTCAATATGGTGAAACTTTACAATCTCGAGTAATTTCCTCTCTACCACCATCACTAGTTTATGGAAACCAACCAGAAGACCATGATCAAGGAAACATTCTCATTGACCAGATGCGACAAAAGAAGGTTCACAAAGACAAAGAAATTCAACAAAAAGAATCCAATATAAGAAAAGGCCAATGGACTCATGATGAGGATGGGATTCTTGTCAAATTGTTGGACTATTCTGGGTTTAATAACTGGTCTCAGATTGCTAAGTTTATGAATGGCAGAAGCGGAAAACAGTGCAGGGAGAGATGGCATAACCATCTTCGACCAGACATTAAGAAAGAGTCATGGAGTGAAGAGGAAGATAGAATATTGATCGAAGCTCACAAGATAGTTGGGAACAAGTTTGCTGAAATTGCAAAGAGACTTCCTGGACGTACTGAGAACTCCGTCAAGAACCGTTGGAACTCCGCTAAGCGCAGCCTGAATGCTACAAAGAAGCCGAACCGGCGAAATAGTTCGAAAGGAACACTACTTCATAAATACATCAACGAAATCACTAATTCTAAGGATGTTCAGAAGGTGCCAAAAAATTCCACCAACATAATGAACATTGAGTATCAGACAAATTTCGACAATACCTATACCAACCCTGGTCTTAGTGATGTTCGATATGAAATTTCTGAGTGTGGTGTTAACTTTGAAGGTTTGGTTACTTCAGTGGAAGAACTTGGTGGCAATGTGACAATGATGTTGAATGGTGAAGATGGAATGGCAAGTGGCTCTGGCACAATGAGTCATGAGATTGGATCATATCAAATGGAGTTTTTTCCTCATGTTAATGATCTATAG
Protein sequence

>Msa0164020

MELDPSFPERIPYLFENFPKIPLEKPEIPALVLLQPSSTLTPAPSNYTDFLYHKSNQYNEHPLNGVNHHTSMVVPSSIKPFSMNQTPSHTTANTNGTQSEFFIDQNPMTFTPNYNEMEAMHDLLNTDIGILDLSKQNFFQYGETLQSRVISSLPPSLVYGNQPEDHDQGNILIDQMRQKKVHKDKEIQQKESNIRKGQWTHDEDGILVKLLDYSGFNNWSQIAKFMNGRSGKQCRERWHNHLRPDIKKESWSEEEDRILIEAHKIVGNKFAEIAKRLPGRTENSVKNRWNSAKRSLNATKKPNRRNSSKGTLLHKYINEITNSKDVQKVPKNSTNIMNIEYQTNFDNTYTNPGLSDVRYEISECGVNFEGLVTSVEELGGNVTMMLNGEDGMASGSGTMSHEIGSYQMEFFPHVNDL*