AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0164960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164960 MtrunA17_Chr6g0449401 90.855 667 22 3 1 628 13 679 0.0 1214
Msa0164960 MtrunA17_Chr7g0227331 69.207 643 158 15 1 628 1 618 0.0 832
Msa0164960 MtrunA17_Chr2g0290691 68.560 493 131 5 159 628 113 604 0.0 700
Msa0164960 MtrunA17_Chr7g0250631 62.083 509 163 7 148 628 255 761 0.0 630
Msa0164960 MtrunA17_Chr8g0335351 66.667 462 142 6 148 599 261 720 0.0 612
Msa0164960 MtrunA17_Chr1g0179101 64.407 413 139 4 192 600 413 821 0.0 548
Msa0164960 MtrunA17_Chr7g0266031 59.653 461 173 6 148 600 388 843 0.0 547
Msa0164960 MtrunA17_Chr3g0080101 59.060 447 161 7 163 601 337 769 1.50e-179 529
Msa0164960 MtrunA17_Chr2g0309421 58.166 447 159 8 204 628 131 571 1.30e-178 518
Msa0164960 MtrunA17_Chr8g0356291 61.962 418 149 6 189 600 65 478 7.49e-178 514
Msa0164960 MtrunA17_Chr4g0063311 52.294 436 173 8 221 628 62 490 1.51e-147 436
Msa0164960 MtrunA17_Chr2g0321101 52.987 385 145 7 229 593 66 434 4.10e-128 385
Msa0164960 MtrunA17_Chr2g0285711 45.964 446 201 9 200 628 32 454 6.37e-122 369
Msa0164960 MtrunA17_Chr8g0381091 48.622 399 172 8 225 609 52 431 1.52e-121 368
Msa0164960 MtrunA17_Chr2g0312641 43.510 416 192 11 198 599 33 419 2.76e-112 345
Msa0164960 MtrunA17_Chr4g0030361 46.316 380 157 4 225 604 282 614 6.36e-111 347
Msa0164960 MtrunA17_Chr2g0327561 45.050 404 186 2 225 628 601 968 9.40e-110 352
Msa0164960 MtrunA17_Chr8g0369091 46.174 379 160 2 225 603 572 906 8.87e-109 349
Msa0164960 MtrunA17_Chr8g0338741 38.861 404 183 14 247 624 15 380 3.14e-79 257
Msa0164960 MtrunA17_Chr2g0329011 37.468 387 195 8 247 628 12 356 1.01e-74 244
Msa0164960 MtrunA17_Chr4g0032761 37.330 367 210 8 247 600 10 369 4.36e-72 238
Msa0164960 MtrunA17_Chr7g0234641 35.356 379 212 8 247 616 8 362 9.28e-70 232
Msa0164960 MtrunA17_Chr5g0428981 35.484 341 175 6 249 588 760 1056 2.13e-57 209
Msa0164960 MtrunA17_Chr4g0018201 35.777 341 174 6 249 588 756 1052 2.29e-57 209
Msa0164960 MtrunA17_Chr6g0478601 34.844 353 186 8 249 600 108 417 5.78e-56 198
Msa0164960 MtrunA17_Chr3g0135951 30.976 410 236 12 185 588 38 406 6.62e-50 181
Msa0164960 MtrunA17_Chr1g0153321 30.726 358 205 8 240 591 96 416 8.08e-48 175
Msa0164960 MtrunA17_Chr2g0299781 27.331 472 288 11 161 626 30 452 2.76e-47 174
Msa0164960 MtrunA17_Chr1g0187581 31.635 373 204 9 241 599 100 435 1.54e-46 172
Msa0164960 MtrunA17_Chr1g0167351 31.831 355 200 10 252 599 110 429 3.36e-45 168
Msa0164960 MtrunA17_Chr1g0183651 30.245 367 212 8 240 599 108 437 1.48e-44 167
Msa0164960 MtrunA17_Chr1g0167311 30.791 354 205 9 252 601 115 432 3.64e-44 165
Msa0164960 MtrunA17_Chr7g0261491 28.947 418 231 12 197 599 75 441 2.55e-43 164
Msa0164960 MtrunA17_Chr7g0245031 39.073 151 90 1 249 399 145 293 5.03e-27 115
Msa0164960 MtrunA17_Chr7g0245031 43.363 113 61 2 477 588 299 409 9.04e-21 95.9
Msa0164960 MtrunA17_Chr4g0059751 37.580 157 85 3 252 399 89 241 4.07e-26 111
Msa0164960 MtrunA17_Chr4g0059751 37.288 118 71 2 477 593 247 362 6.74e-21 95.9
Msa0164960 MtrunA17_Chr1g0197721 31.532 222 140 3 239 450 38 257 1.22e-24 107
Msa0164960 MtrunA17_Chr1g0197721 31.250 160 101 4 464 619 203 357 1.36e-11 67.4
Msa0164960 MtrunA17_Chr2g0286501 26.269 335 169 8 249 583 46 302 5.05e-21 98.6
Msa0164960 MtrunA17_Chr3g0140631 36.242 149 93 1 252 400 37 183 5.56e-21 94.0
Msa0164960 MtrunA17_Chr3g0140631 35.185 108 66 1 476 583 185 288 2.58e-15 77.0
Msa0164960 MtrunA17_Chr8g0351491 26.239 343 173 8 241 583 5 267 1.07e-20 92.8
Msa0164960 MtrunA17_Chr3g0125381 40.541 111 62 1 473 583 100 206 1.26e-20 90.9
Msa0164960 MtrunA17_Chr3g0125381 28.814 177 112 5 302 468 2 174 1.60e-11 64.3
Msa0164960 MtrunA17_Chr3g0132591 26.748 329 152 8 258 583 118 360 2.84e-19 91.3
Msa0164960 MtrunA17_Chr3g0132671 24.311 399 181 13 249 617 16 323 2.57e-18 88.6
Msa0164960 MtrunA17_Chr6g0468751 25.075 335 172 9 249 583 16 271 8.23e-18 87.0
Msa0164960 MtrunA17_Chr3g0114511 32.484 157 99 2 244 399 24 174 1.05e-17 86.3
Msa0164960 MtrunA17_Chr8g0353621 31.285 179 116 2 252 425 10 186 1.25e-17 83.6
Msa0164960 MtrunA17_Chr8g0353621 40.196 102 57 1 482 583 164 261 7.18e-16 78.2
Msa0164960 MtrunA17_Chr1g0205421 32.704 159 100 3 243 399 3 156 4.88e-17 84.3
Msa0164960 MtrunA17_Chr4g0013131 23.724 333 175 11 243 572 3 259 5.63e-17 84.0
Msa0164960 MtrunA17_Chr3g0107051 35.135 148 93 2 252 399 21 165 7.47e-17 83.6
Msa0164960 MtrunA17_Chr2g0284011 25.000 304 151 8 244 544 4 233 1.62e-16 82.4
Msa0164960 MtrunA17_Chr8g0379091 32.026 153 101 1 247 399 21 170 2.83e-16 82.0
Msa0164960 MtrunA17_Chr2g0321841 29.221 154 103 3 249 399 1 151 3.32e-16 82.8
Msa0164960 MtrunA17_Chr1g0188031 32.692 156 89 4 252 399 20 167 3.73e-16 81.3
Msa0164960 MtrunA17_Chr2g0284031 31.373 153 102 1 247 399 26 175 5.33e-16 81.3
Msa0164960 MtrunA17_Chr7g0244521 24.781 343 175 12 244 583 4 266 5.36e-16 80.9
Msa0164960 MtrunA17_Chr1g0190831 28.387 155 103 3 249 399 1 151 6.29e-16 81.3
Msa0164960 MtrunA17_Chr4g0025671 28.387 155 105 3 248 399 4 155 6.49e-16 82.0
Msa0164960 MtrunA17_Chr3g0107011 29.801 151 103 1 249 399 11 158 7.03e-16 80.5
Msa0164960 MtrunA17_Chr5g0432491 34.459 148 95 2 252 399 23 168 8.13e-16 80.1
Msa0164960 MtrunA17_Chr2g0302431 30.247 162 111 2 238 399 6 165 1.14e-15 80.1
Msa0164960 MtrunA17_Chr2g0330211 23.140 363 206 10 247 595 13 316 1.38e-15 80.1
Msa0164960 MtrunA17_Chr1g0173921 28.571 154 104 3 249 399 1 151 3.01e-15 79.7
Msa0164960 MtrunA17_Chr4g0074111 24.000 275 134 7 252 524 18 219 4.87e-15 77.4
Msa0164960 MtrunA17_Chr7g0272841 29.245 212 127 7 252 449 68 270 1.01e-14 77.8
Msa0164960 MtrunA17_Chr5g0432471 21.818 330 173 10 249 572 9 259 1.01e-14 77.0
Msa0164960 MtrunA17_Chr5g0428031 29.730 148 102 2 252 399 9 154 1.03e-14 77.0
Msa0164960 MtrunA17_Chr7g0258051 26.115 157 110 3 248 401 12 165 1.04e-14 77.4
Msa0164960 MtrunA17_Chr4g0063881 30.405 148 101 1 252 399 11 156 2.06e-14 75.9
Msa0164960 MtrunA17_Chr7g0274941 30.323 155 103 3 244 396 8 159 2.21e-14 74.3
Msa0164960 MtrunA17_Chr7g0274941 35.922 103 59 3 484 583 176 274 6.86e-11 63.9
Msa0164960 MtrunA17_Chr8g0385341 33.333 153 96 4 252 400 30 180 3.01e-14 75.9
Msa0164960 MtrunA17_Chr6g0486661 35.433 127 72 5 479 599 912 1034 3.27e-14 76.3
Msa0164960 MtrunA17_Chr1g0205931 28.448 232 142 9 232 449 36 257 4.56e-14 75.5
Msa0164960 MtrunA17_Chr1g0185221 27.273 154 106 3 249 399 1 151 5.21e-14 75.1
Msa0164960 MtrunA17_Chr7g0260191 26.623 154 107 3 249 399 1 151 6.75e-14 75.1
Msa0164960 MtrunA17_Chr1g0200601 28.151 238 145 9 251 471 29 257 7.63e-14 74.3
Msa0164960 MtrunA17_Chr3g0091311 30.128 156 106 2 244 399 4 156 7.92e-14 72.0
Msa0164960 MtrunA17_Chr5g0409421 26.471 340 192 12 249 585 1 285 1.00e-13 73.9
Msa0164960 MtrunA17_Chr5g0419441 28.947 152 105 2 252 403 239 387 1.21e-13 74.3
Msa0164960 MtrunA17_Chr1g0202831 25.532 235 148 5 240 452 399 628 1.49e-13 74.3
Msa0164960 MtrunA17_Chr8g0346071 27.429 175 120 3 238 412 8 175 1.85e-13 72.8
Msa0164960 MtrunA17_Chr1g0170551 33.019 106 65 2 482 587 162 261 1.97e-13 73.9
Msa0164960 MtrunA17_Chr1g0170551 28.916 166 114 3 246 411 1 162 3.82e-12 69.7
Msa0164960 MtrunA17_Chr2g0317001 27.632 152 106 2 252 403 15 162 2.28e-13 73.6
Msa0164960 MtrunA17_Chr2g0304111 28.931 159 106 3 241 399 17 168 2.37e-13 72.8
Msa0164960 MtrunA17_Chr7g0256001 30.435 184 113 6 251 427 140 315 2.65e-13 73.2
Msa0164960 MtrunA17_Chr4g0001331 30.556 144 97 2 256 399 24 164 2.85e-13 72.4
Msa0164960 MtrunA17_Chr1g0176421 30.337 178 115 5 252 427 161 331 4.71e-13 72.4
Msa0164960 MtrunA17_Chr5g0441011 30.667 150 98 4 252 399 13 158 7.60e-13 70.9
Msa0164960 MtrunA17_Chr6g0453681 29.801 151 104 2 249 399 16 164 7.86e-13 71.2
Msa0164960 MtrunA17_Chr2g0317501 32.164 171 107 6 234 399 114 280 1.26e-12 70.9
Msa0164960 MtrunA17_Chr1g0150321 32.394 142 93 2 258 399 19 157 1.40e-12 70.1
Msa0164960 MtrunA17_Chr5g0448721 27.941 204 133 6 252 448 96 292 1.46e-12 70.5
Msa0164960 MtrunA17_Chr1g0166101 30.323 155 93 3 252 399 24 170 1.59e-12 69.7
Msa0164960 MtrunA17_Chr3g0091281 25.442 283 133 9 244 523 4 211 1.71e-12 67.8
Msa0164960 MtrunA17_Chr3g0130151 30.168 179 112 6 256 431 248 416 1.82e-12 70.5
Msa0164960 MtrunA17_Chr1g0170281 30.357 168 111 4 237 400 103 268 2.48e-12 69.7
Msa0164960 MtrunA17_Chr1g0203881 32.432 148 94 3 256 399 45 190 2.60e-12 69.7
Msa0164960 MtrunA17_Chr8g0345801 33.588 131 80 4 257 385 20 145 2.71e-12 67.4
Msa0164960 MtrunA17_Chr8g0374701 29.697 165 102 5 267 427 148 302 2.76e-12 69.7
Msa0164960 MtrunA17_Chr1g0173541 32.051 156 100 4 249 400 49 202 4.38e-12 68.9
Msa0164960 MtrunA17_Chr5g0441691 29.444 180 114 5 252 427 68 238 4.78e-12 68.9
Msa0164960 MtrunA17_Chr8g0339221 26.608 342 188 12 249 584 1 285 4.84e-12 68.6
Msa0164960 MtrunA17_Chr8g0346081 26.163 172 120 3 241 412 11 175 5.54e-12 68.2
Msa0164960 MtrunA17_Chr8g0384301 26.882 186 123 5 249 431 296 471 6.14e-12 68.9
Msa0164960 MtrunA17_Chr4g0008561 33.333 105 64 3 482 584 177 277 6.38e-12 68.9
Msa0164960 MtrunA17_Chr3g0098951 26.512 215 139 7 244 448 75 280 1.05e-11 67.8
Msa0164960 MtrunA17_Chr3g0133541 27.778 216 141 4 251 455 306 517 1.27e-11 67.8
Msa0164960 MtrunA17_Chr0c02g0489761 29.444 180 114 5 252 427 78 248 1.46e-11 67.4
Msa0164960 MtrunA17_Chr4g0074811 32.258 155 99 5 250 400 89 241 1.73e-11 67.0
Msa0164960 MtrunA17_Chr4g0047191 29.508 122 84 1 280 399 73 194 1.75e-11 66.2
Msa0164960 MtrunA17_Chr1g0201571 32.026 153 93 6 252 399 126 272 2.12e-11 67.0
Msa0164960 MtrunA17_Chr4g0047211 29.508 122 84 1 280 399 68 189 2.15e-11 65.9
Msa0164960 MtrunA17_Chr4g0045261 29.412 153 96 4 279 427 167 311 2.41e-11 66.6
Msa0164960 MtrunA17_Chr3g0129721 32.051 156 93 6 251 399 23 172 2.89e-11 64.7
Msa0164960 MtrunA17_Chr5g0444171 30.065 153 101 4 252 400 92 242 3.10e-11 66.2
Msa0164960 MtrunA17_Chr2g0333821 29.730 148 101 2 252 399 14 158 3.40e-11 65.9
Msa0164960 MtrunA17_Chr8g0386981 29.252 147 94 3 258 399 414 555 3.64e-11 66.6
Msa0164960 MtrunA17_Chr7g0257751 31.373 153 99 4 252 400 58 208 3.98e-11 65.9
Msa0164960 MtrunA17_Chr3g0091421 30.573 157 102 4 245 399 5 156 4.17e-11 63.5
Msa0164960 MtrunA17_Chr5g0405421 26.230 183 122 5 250 427 97 271 4.38e-11 65.9
Msa0164960 MtrunA17_Chr3g0090261 26.131 199 127 7 244 438 74 256 4.62e-11 65.1
Msa0164960 MtrunA17_Chr5g0402551 27.660 188 121 6 252 432 134 313 6.01e-11 65.5
Msa0164960 MtrunA17_Chr1g0188991 26.984 189 125 4 250 437 13 189 6.62e-11 65.5
Msa0164960 MtrunA17_Chr2g0276831 28.421 190 121 6 245 427 3 184 7.68e-11 64.3
Msa0164960 MtrunA17_Chr3g0131181 30.719 153 100 4 252 400 29 179 8.37e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0164960 AT5G47750.1 69.231 494 123 7 159 628 98 586 0.0 690
Msa0164960 AT4G26610.1 68.916 489 140 6 148 628 22 506 0.0 672
Msa0164960 AT5G55910.2 68.699 492 134 7 151 628 13 498 0.0 665
Msa0164960 AT5G55910.1 68.699 492 134 7 151 628 13 498 0.0 665
Msa0164960 AT3G27580.2 66.926 514 130 8 140 628 80 578 0.0 662
Msa0164960 AT3G27580.1 66.926 514 130 8 140 628 80 578 0.0 662
Msa0164960 AT2G44830.2 67.925 424 123 7 192 607 303 721 0.0 590
Msa0164960 AT2G44830.3 67.925 424 123 7 192 607 303 721 0.0 590
Msa0164960 AT2G44830.1 67.925 424 123 7 192 607 303 721 0.0 590
Msa0164960 AT5G40030.1 62.322 422 133 7 225 628 86 499 0.0 542
Msa0164960 AT1G79250.1 66.146 384 123 3 225 603 119 500 0.0 531
Msa0164960 AT1G79250.3 66.146 384 123 3 225 603 119 500 0.0 531
Msa0164960 AT1G79250.2 66.146 384 123 3 225 603 119 500 0.0 531
Msa0164960 AT1G79250.4 66.146 384 123 3 225 603 119 500 0.0 531
Msa0164960 AT3G12690.1 62.250 400 144 3 208 607 141 533 1.93e-180 523
Msa0164960 AT3G12690.3 62.250 400 144 3 208 607 141 533 1.93e-180 523
Msa0164960 AT3G12690.2 62.250 400 144 3 208 607 141 533 1.93e-180 523
Msa0164960 AT3G52890.2 57.642 458 171 6 192 628 479 934 6.63e-180 535
Msa0164960 AT3G52890.4 57.642 458 171 6 192 628 479 934 6.63e-180 535
Msa0164960 AT3G52890.1 57.642 458 171 6 192 628 479 934 6.63e-180 535
Msa0164960 AT3G52890.3 57.642 458 171 6 192 628 479 934 6.63e-180 535
Msa0164960 AT1G16440.1 60.849 424 136 7 225 628 86 499 6.58e-178 514
Msa0164960 AT5G03640.2 56.739 460 179 7 183 628 473 926 5.25e-177 526
Msa0164960 AT5G03640.1 56.739 460 179 7 183 628 473 926 5.25e-177 526
Msa0164960 AT2G36350.1 57.174 453 175 6 192 628 500 949 7.22e-172 514
Msa0164960 AT2G26700.1 45.868 484 200 9 194 622 23 499 2.42e-133 401
Msa0164960 AT3G44610.1 54.795 365 130 8 252 593 71 423 6.95e-128 384
Msa0164960 AT2G34650.1 49.515 412 177 10 225 628 50 438 2.62e-127 382
Msa0164960 AT5G58140.6 44.499 409 177 5 226 628 551 915 1.46e-110 353
Msa0164960 AT5G58140.7 44.499 409 177 5 226 628 551 915 1.46e-110 353
Msa0164960 AT5G58140.5 44.499 409 177 5 226 628 551 915 1.46e-110 353
Msa0164960 AT5G58140.2 44.499 409 177 5 226 628 551 915 1.46e-110 353
Msa0164960 AT5G58140.1 44.499 409 177 5 226 628 551 915 1.46e-110 353
Msa0164960 AT5G58140.3 47.139 367 150 3 226 592 551 873 8.95e-108 346
Msa0164960 AT3G14370.1 43.367 392 183 5 227 609 61 422 1.25e-107 333
Msa0164960 AT3G45780.2 46.438 379 161 4 225 603 636 972 7.64e-101 329
Msa0164960 AT3G45780.1 46.438 379 161 4 225 603 636 972 7.64e-101 329
Msa0164960 AT1G53700.1 41.960 398 188 7 227 614 66 430 8.30e-99 310
Msa0164960 AT1G51170.1 37.705 366 192 8 247 600 17 358 2.51e-70 233
Msa0164960 AT3G20830.1 38.798 366 192 9 246 600 15 359 5.20e-70 233
Msa0164960 AT3G25250.1 34.688 369 197 9 247 602 12 349 8.77e-67 224
Msa0164960 AT4G13000.1 34.521 365 193 9 247 602 15 342 1.63e-65 219
Msa0164960 AT1G45160.2 33.671 395 198 8 247 624 665 1012 2.19e-53 197
Msa0164960 AT1G45160.1 34.734 357 185 6 247 602 665 974 3.79e-53 197
Msa0164960 AT5G62310.1 34.593 344 175 9 249 588 751 1048 4.83e-53 197
Msa0164960 AT1G48490.4 33.528 343 178 7 247 588 824 1117 1.64e-51 192
Msa0164960 AT1G48490.3 33.528 343 178 7 247 588 823 1116 1.67e-51 192
Msa0164960 AT1G48490.2 33.528 343 178 7 247 588 823 1116 1.67e-51 192
Msa0164960 AT1G48490.1 33.528 343 178 7 247 588 823 1116 1.67e-51 192
Msa0164960 AT3G17850.1 34.320 338 178 8 252 588 882 1176 3.64e-51 191
Msa0164960 AT5G09890.2 31.965 341 195 8 252 588 102 409 4.86e-49 179
Msa0164960 AT5G09890.1 31.965 341 195 8 252 588 102 409 4.96e-49 179
Msa0164960 AT1G30640.3 30.081 369 222 9 237 601 12 348 7.74e-49 177
Msa0164960 AT1G30640.2 30.081 369 222 10 237 601 105 441 1.75e-48 178
Msa0164960 AT1G30640.1 30.081 369 222 10 237 601 105 441 1.75e-48 178
Msa0164960 AT4G33080.2 30.688 378 224 10 231 599 73 421 2.59e-48 177
Msa0164960 AT4G33080.1 30.688 378 224 10 231 599 73 421 3.85e-48 177
Msa0164960 AT2G20470.3 30.518 367 209 8 240 600 112 438 6.38e-45 168
Msa0164960 AT4G14350.2 28.434 415 239 11 195 601 72 436 7.24e-45 168
Msa0164960 AT4G14350.1 28.434 415 239 11 195 601 72 436 7.24e-45 168
Msa0164960 AT4G14350.4 28.434 415 239 11 195 601 72 436 7.24e-45 168
Msa0164960 AT4G14350.3 28.434 415 239 11 195 601 72 436 9.29e-45 168
Msa0164960 AT2G20470.2 30.518 367 209 8 240 600 112 438 1.48e-44 167
Msa0164960 AT2G20470.1 30.518 367 209 8 240 600 112 438 1.48e-44 167
Msa0164960 AT3G23310.1 30.939 362 212 10 231 588 99 426 5.34e-44 166
Msa0164960 AT2G19400.1 29.041 365 223 10 231 588 84 419 4.52e-41 157
Msa0164960 AT1G03920.1 29.056 413 237 12 195 599 90 454 1.10e-39 154
Msa0164960 AT1G03920.3 29.056 413 237 12 195 599 90 454 1.10e-39 154
Msa0164960 AT1G03920.2 30.899 356 200 11 252 599 24 341 2.19e-39 150
Msa0164960 AT5G58140.4 48.855 131 67 0 226 356 551 681 1.42e-33 137
Msa0164960 AT3G08720.1 38.710 155 93 1 245 399 133 285 5.15e-28 118
Msa0164960 AT3G08720.1 45.133 113 58 3 477 588 291 400 8.76e-24 105
Msa0164960 AT3G08720.3 38.710 155 93 1 245 399 133 285 5.15e-28 118
Msa0164960 AT3G08720.3 45.133 113 58 3 477 588 291 400 8.76e-24 105
Msa0164960 AT3G08720.4 38.710 155 93 1 245 399 133 285 5.15e-28 118
Msa0164960 AT3G08720.4 45.133 113 58 3 477 588 291 400 8.76e-24 105
Msa0164960 AT3G08720.2 38.710 155 93 1 245 399 133 285 5.15e-28 118
Msa0164960 AT3G08720.2 45.133 113 58 3 477 588 291 400 8.76e-24 105
Msa0164960 AT3G08730.1 35.052 194 105 3 206 399 107 279 4.98e-27 115
Msa0164960 AT3G08730.1 45.133 113 58 3 477 588 285 394 4.91e-24 106
Msa0164960 AT3G08730.2 35.052 194 105 3 206 399 107 279 4.98e-27 115
Msa0164960 AT3G08730.2 45.133 113 58 3 477 588 285 394 4.91e-24 106
Msa0164960 AT5G04510.2 33.493 209 127 4 252 450 44 250 4.24e-25 108
Msa0164960 AT5G04510.2 34.752 141 85 4 464 602 196 331 1.63e-17 85.5
Msa0164960 AT5G04510.3 33.493 209 127 4 252 450 44 250 6.64e-25 105
Msa0164960 AT5G04510.1 33.493 209 127 4 252 450 44 250 8.51e-25 108
Msa0164960 AT5G04510.1 34.752 141 85 4 464 602 196 331 1.63e-17 86.3
Msa0164960 AT2G25090.1 26.488 336 173 10 252 584 15 279 2.45e-24 107
Msa0164960 AT3G10540.1 31.532 222 140 4 239 450 32 251 1.70e-23 104
Msa0164960 AT3G10540.1 31.646 158 101 4 464 619 197 349 5.25e-17 84.7
Msa0164960 AT5G18700.1 36.095 169 97 4 249 414 1 161 1.19e-20 97.8
Msa0164960 AT4G32830.1 35.570 149 94 1 252 400 31 177 7.18e-19 88.2
Msa0164960 AT4G32830.1 33.333 126 73 2 476 601 179 293 2.29e-15 77.8
Msa0164960 AT2G25880.1 33.735 166 108 1 235 400 8 171 7.65e-19 87.8
Msa0164960 AT2G25880.1 37.963 108 63 1 476 583 173 276 5.14e-16 79.3
Msa0164960 AT2G25880.4 33.735 166 108 1 235 400 21 184 8.54e-19 87.8
Msa0164960 AT2G25880.4 37.963 108 63 1 476 583 186 289 5.54e-16 79.7
Msa0164960 AT3G01090.3 24.850 334 172 9 251 584 18 272 8.83e-19 90.5
Msa0164960 AT3G01090.1 24.850 334 172 9 251 584 18 272 8.83e-19 90.5
Msa0164960 AT2G45490.2 28.571 231 154 6 244 467 14 240 1.05e-18 86.7
Msa0164960 AT2G45490.2 38.824 85 52 0 476 560 170 254 5.85e-13 69.7
Msa0164960 AT2G45490.1 37.097 124 67 2 476 599 170 282 1.16e-18 87.4
Msa0164960 AT2G45490.1 27.170 265 172 8 244 491 14 274 1.31e-18 87.0
Msa0164960 AT3G01090.2 24.850 334 172 9 251 584 41 295 1.22e-18 90.1
Msa0164960 AT2G25880.3 33.735 166 108 1 235 400 69 232 1.39e-18 88.2
Msa0164960 AT2G25880.3 37.963 108 63 1 476 583 234 337 1.57e-15 79.0
Msa0164960 AT1G12680.1 34.194 155 90 5 256 408 111 255 4.51e-18 87.8
Msa0164960 AT2G20050.1 37.931 116 66 3 479 591 934 1046 2.51e-17 87.0
Msa0164960 AT2G20050.2 37.931 116 66 3 479 591 931 1043 2.62e-17 86.7
Msa0164960 AT5G45820.1 31.210 157 105 2 243 399 3 156 3.12e-17 85.1
Msa0164960 AT3G29160.3 24.251 334 174 10 251 584 19 273 8.65e-17 82.8
Msa0164960 AT5G25110.1 32.075 159 98 3 248 399 32 187 1.11e-16 83.6
Msa0164960 AT2G30360.1 26.190 336 165 10 252 583 21 277 1.12e-16 83.2
Msa0164960 AT3G29160.1 23.952 334 175 9 251 584 19 273 2.14e-16 82.8
Msa0164960 AT3G29160.2 23.952 334 175 9 251 584 19 273 2.14e-16 82.8
Msa0164960 AT2G25880.2 37.963 108 63 1 476 583 141 244 3.65e-16 79.3
Msa0164960 AT5G57630.2 25.177 282 131 7 245 523 5 209 3.83e-16 81.3
Msa0164960 AT3G61960.2 25.234 321 159 11 257 571 15 260 4.30e-16 82.4
Msa0164960 AT5G57630.1 25.177 282 131 7 245 523 5 209 4.59e-16 81.3
Msa0164960 AT3G61960.1 25.234 321 159 11 257 571 15 260 4.63e-16 82.4
Msa0164960 AT2G34180.1 26.224 286 134 9 241 523 46 257 5.30e-16 81.6
Msa0164960 AT4G18700.1 31.373 153 102 1 247 399 21 170 5.72e-16 81.6
Msa0164960 AT3G17510.1 32.704 159 104 3 241 399 10 165 8.09e-16 80.9
Msa0164960 AT5G28290.3 29.870 154 102 3 249 399 1 151 8.34e-16 81.3
Msa0164960 AT5G28290.1 29.870 154 102 3 249 399 1 151 9.12e-16 81.3
Msa0164960 AT5G28290.2 29.870 154 102 3 249 399 1 151 9.12e-16 81.3
Msa0164960 AT4G24400.1 29.193 161 112 2 252 412 9 167 1.17e-15 80.1
Msa0164960 AT2G38490.1 38.095 147 82 4 256 399 32 172 1.34e-15 80.1
Msa0164960 AT5G10930.1 35.417 144 87 4 258 399 18 157 1.44e-15 80.1
Msa0164960 AT3G04810.2 28.571 154 104 3 249 399 1 151 1.45e-15 80.5
Msa0164960 AT3G04810.1 28.571 154 104 3 249 399 1 151 1.45e-15 80.5
Msa0164960 AT3G04810.3 28.571 154 104 3 249 399 1 151 1.45e-15 80.5
Msa0164960 AT5G45810.1 30.065 153 104 1 247 399 23 172 1.45e-15 80.1
Msa0164960 AT4G24400.2 29.193 161 112 2 252 412 9 167 1.69e-15 79.7
Msa0164960 AT3G44200.2 27.922 154 105 3 249 399 5 155 2.31e-15 80.5
Msa0164960 AT3G44200.1 27.922 154 105 3 249 399 5 155 2.31e-15 80.5
Msa0164960 AT1G54510.4 27.922 154 105 3 249 399 1 151 4.71e-15 79.0
Msa0164960 AT1G54510.2 27.922 154 105 3 249 399 1 151 4.71e-15 79.0
Msa0164960 AT1G54510.1 27.922 154 105 3 249 399 1 151 4.71e-15 79.0
Msa0164960 AT1G54510.3 27.922 154 105 3 249 399 1 151 4.71e-15 79.0
Msa0164960 AT3G63280.4 28.025 157 107 3 246 399 52 205 5.03e-15 79.0
Msa0164960 AT3G63280.2 28.571 154 104 3 249 399 1 151 5.23e-15 78.6
Msa0164960 AT3G63280.3 28.571 154 104 3 249 399 1 151 5.23e-15 78.6
Msa0164960 AT3G63280.1 28.571 154 104 3 249 399 1 151 5.23e-15 78.6
Msa0164960 AT3G20860.1 25.166 151 112 1 249 399 1 150 7.14e-15 77.8
Msa0164960 AT1G54960.1 28.251 223 131 8 240 450 66 271 7.95e-15 78.6
Msa0164960 AT1G54960.2 28.251 223 131 8 240 450 66 271 7.95e-15 78.6
Msa0164960 AT5G01810.3 33.333 159 99 4 243 399 3 156 8.96e-15 77.0
Msa0164960 AT3G21220.2 24.157 356 179 14 255 603 73 344 9.14e-15 76.6
Msa0164960 AT3G21220.1 24.157 356 179 14 255 603 73 344 9.14e-15 76.6
Msa0164960 AT5G01810.1 33.333 159 99 4 243 399 3 156 9.43e-15 77.4
Msa0164960 AT5G01810.2 33.333 159 99 4 243 399 3 156 9.43e-15 77.4
Msa0164960 AT3G06030.1 27.948 229 136 7 233 449 59 270 1.18e-14 77.8
Msa0164960 AT1G35670.1 31.818 154 99 4 251 400 25 176 1.54e-14 77.0
Msa0164960 AT1G29230.1 30.065 153 100 2 249 399 71 218 1.60e-14 77.0
Msa0164960 AT1G09000.2 28.774 212 130 8 252 450 69 272 2.43e-14 76.6
Msa0164960 AT1G09000.1 28.774 212 130 8 252 450 69 272 2.83e-14 76.6
Msa0164960 AT4G14580.1 24.390 328 171 11 245 569 14 267 2.98e-14 75.9
Msa0164960 AT5G21326.1 32.667 150 95 4 252 399 13 158 3.20e-14 75.9
Msa0164960 AT4G04720.2 23.410 346 173 12 248 583 75 338 4.11e-14 75.9
Msa0164960 AT4G04720.1 23.410 346 173 12 248 583 75 338 4.11e-14 75.9
Msa0164960 AT5G39440.1 33.557 149 97 2 251 399 18 164 4.54e-14 75.5
Msa0164960 AT5G39440.1 37.624 101 57 3 485 585 178 272 9.70e-11 65.1
Msa0164960 AT1G69220.1 30.323 155 99 3 252 403 249 397 5.15e-14 75.9
Msa0164960 AT1G53570.6 29.412 187 119 5 256 439 218 394 8.35e-14 74.7
Msa0164960 AT1G53570.7 29.412 187 119 5 256 439 218 394 8.45e-14 74.7
Msa0164960 AT1G53570.1 29.412 187 119 5 256 439 218 394 1.09e-13 74.7
Msa0164960 AT2G26980.2 29.878 164 104 5 238 399 5 159 1.13e-13 72.0
Msa0164960 AT1G53570.2 29.412 187 119 5 256 439 218 394 1.15e-13 74.7
Msa0164960 AT1G53570.3 29.412 187 119 5 256 439 218 394 1.15e-13 74.7
Msa0164960 AT1G53570.4 29.412 187 119 5 256 439 218 394 1.19e-13 74.7
Msa0164960 AT2G26980.3 29.878 164 104 5 238 399 5 159 1.31e-13 73.9
Msa0164960 AT2G26980.1 29.878 164 104 5 238 399 5 159 1.40e-13 73.2
Msa0164960 AT5G35410.2 28.571 154 108 2 246 399 5 156 1.54e-13 73.2
Msa0164960 AT2G26980.4 29.878 164 104 5 238 399 15 169 1.63e-13 73.6
Msa0164960 AT5G01820.1 35.220 159 95 5 243 399 14 166 1.98e-13 73.2
Msa0164960 AT4G09570.1 31.818 154 99 4 251 400 24 175 2.12e-13 73.6
Msa0164960 AT2G26980.5 29.878 164 104 5 238 399 5 159 2.29e-13 73.2
Msa0164960 AT2G17890.1 29.834 181 114 5 252 427 108 280 2.31e-13 73.6
Msa0164960 AT5G45430.2 29.947 187 113 7 249 432 1 172 2.52e-13 73.2
Msa0164960 AT3G10660.2 30.556 180 112 5 252 427 186 356 2.88e-13 73.6
Msa0164960 AT3G10660.1 30.556 180 112 5 252 427 186 356 2.88e-13 73.6
Msa0164960 AT5G45430.1 29.947 187 113 7 249 432 1 172 2.91e-13 73.2
Msa0164960 AT5G35410.1 28.571 154 108 2 246 399 5 156 3.91e-13 72.4
Msa0164960 AT4G26070.4 30.516 213 124 8 214 411 20 223 4.90e-13 71.2
Msa0164960 AT4G26070.1 30.460 174 114 5 240 411 56 224 5.36e-13 70.9
Msa0164960 AT1G50700.3 33.333 153 96 4 252 400 73 223 6.19e-13 72.0
Msa0164960 AT1G01140.3 28.743 167 112 3 233 399 5 164 7.07e-13 71.6
Msa0164960 AT4G26070.5 30.460 174 114 5 240 411 43 211 7.75e-13 70.5
Msa0164960 AT4G19110.2 29.189 185 117 5 249 432 1 172 8.01e-13 71.6
Msa0164960 AT1G01140.1 28.743 167 112 3 233 399 5 164 8.09e-13 71.2
Msa0164960 AT1G01140.2 28.743 167 112 3 233 399 5 164 8.23e-13 71.2
Msa0164960 AT4G19110.1 29.189 185 117 5 249 432 1 172 8.36e-13 71.2
Msa0164960 AT4G26070.2 30.460 174 114 5 240 411 56 224 8.57e-13 70.5
Msa0164960 AT4G26070.3 30.460 174 114 5 240 411 56 224 8.57e-13 70.5
Msa0164960 AT1G50700.1 33.333 153 96 4 252 400 73 223 8.65e-13 71.6
Msa0164960 AT1G30270.1 29.333 150 100 3 252 399 31 176 8.69e-13 71.6
Msa0164960 AT1G30270.2 29.333 150 100 3 252 399 31 176 1.04e-12 71.2
Msa0164960 AT1G12580.1 28.319 226 144 8 207 427 2 214 1.05e-12 71.2
Msa0164960 AT1G50700.2 33.333 153 96 4 252 400 73 223 1.26e-12 71.2
Msa0164960 AT3G23000.1 30.968 155 92 4 252 399 25 171 1.41e-12 70.5
Msa0164960 AT1G53165.1 28.105 153 106 2 251 403 14 162 1.69e-12 70.9
Msa0164960 AT1G32320.1 31.034 145 92 2 255 399 51 187 1.75e-12 69.3
Msa0164960 AT3G20410.2 32.026 153 98 4 252 400 91 241 1.80e-12 70.5
Msa0164960 AT3G20410.1 32.026 153 98 4 252 400 91 241 1.80e-12 70.5
Msa0164960 AT1G53165.3 28.105 153 106 2 251 403 14 162 1.81e-12 70.9
Msa0164960 AT5G58380.1 27.703 148 104 2 252 399 12 156 1.82e-12 70.5
Msa0164960 AT1G53165.2 28.105 153 106 2 251 403 14 162 1.82e-12 70.9
Msa0164960 AT1G50240.3 33.333 102 62 2 482 583 161 256 2.10e-12 71.2
Msa0164960 AT1G50240.3 29.375 160 109 3 252 411 6 161 1.44e-11 68.6
Msa0164960 AT1G50240.2 33.333 102 62 2 482 583 161 256 2.10e-12 71.2
Msa0164960 AT1G50240.2 29.375 160 109 3 252 411 6 161 1.44e-11 68.6
Msa0164960 AT1G48260.1 32.432 148 98 2 252 399 11 156 2.23e-12 70.1
Msa0164960 AT4G35310.2 27.451 204 134 6 252 448 97 293 2.45e-12 70.1
Msa0164960 AT4G35310.1 27.451 204 134 6 252 448 97 293 2.45e-12 70.1
Msa0164960 AT2G41860.2 31.613 155 100 4 250 400 52 204 3.36e-12 69.7
Msa0164960 AT2G41860.1 31.613 155 100 4 250 400 52 204 3.48e-12 69.7
Msa0164960 AT2G35890.2 26.695 236 151 8 203 427 78 302 4.27e-12 69.3
Msa0164960 AT2G35890.1 26.695 236 151 8 203 427 78 302 4.27e-12 69.3
Msa0164960 AT1G69220.2 30.137 146 93 3 261 403 231 370 5.38e-12 69.7
Msa0164960 AT2G38910.1 29.609 179 115 6 252 427 134 304 5.69e-12 69.3
Msa0164960 AT5G04870.1 30.000 180 113 5 252 427 150 320 8.30e-12 68.6
Msa0164960 AT2G41140.1 29.032 186 113 6 251 427 122 297 9.08e-12 68.6
Msa0164960 AT4G30960.1 29.677 155 105 3 245 399 18 168 9.45e-12 68.2
Msa0164960 AT4G10010.2 32.749 171 106 6 234 399 136 302 1.14e-11 68.2
Msa0164960 AT3G56760.1 29.348 184 115 6 251 427 123 298 1.44e-11 67.8
Msa0164960 AT5G57565.2 32.520 123 72 3 311 429 14 129 1.57e-11 62.4
Msa0164960 AT5G57565.6 32.520 123 72 3 311 429 14 129 1.57e-11 62.4
Msa0164960 AT1G63700.1 24.138 232 155 4 240 452 388 617 1.59e-11 68.2
Msa0164960 AT1G63700.2 24.138 232 155 4 240 452 388 617 1.59e-11 68.2
Msa0164960 AT1G73500.1 29.730 148 93 4 255 399 50 189 1.80e-11 66.2
Msa0164960 AT3G57530.2 33.557 149 93 4 256 400 67 213 1.81e-11 67.0
Msa0164960 AT2G31500.1 34.228 149 92 4 256 400 70 216 1.88e-11 67.4
Msa0164960 AT1G78290.3 32.258 155 93 5 249 399 1 147 1.90e-11 66.2
Msa0164960 AT1G78290.2 32.258 155 93 5 249 399 1 147 1.90e-11 66.2
Msa0164960 AT4G36070.1 27.473 182 119 5 251 427 70 243 2.26e-11 67.0
Msa0164960 AT4G36070.2 27.473 182 119 5 251 427 70 243 2.31e-11 67.0
Msa0164960 AT3G57530.1 33.557 149 93 4 256 400 67 213 2.46e-11 67.0
Msa0164960 AT5G66210.3 27.072 181 121 3 251 427 61 234 2.81e-11 66.6
Msa0164960 AT1G53050.2 30.994 171 109 6 234 399 114 280 2.87e-11 67.0
Msa0164960 AT1G53050.1 30.994 171 109 6 234 399 114 280 2.87e-11 67.0
Msa0164960 AT2G17290.1 26.961 204 135 6 252 448 85 281 2.89e-11 67.0
Msa0164960 AT2G17290.2 26.961 204 135 6 252 448 85 281 2.89e-11 67.0
Msa0164960 AT5G19360.1 29.444 180 114 5 252 427 68 238 3.31e-11 66.6
Msa0164960 AT5G66210.5 27.072 181 121 3 251 427 61 234 3.47e-11 66.2
Msa0164960 AT3G05050.3 30.405 148 102 1 252 399 138 284 3.70e-11 66.6
Msa0164960 AT3G05050.2 30.405 148 102 1 252 399 138 284 3.70e-11 66.6
Msa0164960 AT3G05050.1 30.405 148 102 1 252 399 138 284 3.70e-11 66.6
Msa0164960 AT5G66210.1 27.072 181 121 3 251 427 61 234 3.74e-11 66.2
Msa0164960 AT5G66210.2 27.072 181 121 3 251 427 61 234 3.74e-11 66.2
Msa0164960 AT5G66210.6 27.072 181 121 3 251 427 61 234 3.83e-11 66.2
Msa0164960 AT5G66210.4 27.072 181 121 3 251 427 61 234 3.83e-11 66.2
Msa0164960 AT4G04710.2 27.700 213 134 8 225 427 8 210 3.97e-11 66.2
Msa0164960 AT4G04710.4 27.700 213 134 8 225 427 8 210 4.03e-11 66.2
Msa0164960 AT5G12180.1 29.444 180 114 5 252 427 73 243 4.49e-11 66.2
Msa0164960 AT4G04710.1 27.700 213 134 8 225 427 8 210 4.50e-11 66.2
Msa0164960 AT5G24430.1 25.683 183 121 5 252 427 143 317 4.93e-11 66.2
Msa0164960 AT5G12480.1 29.870 154 102 4 251 400 58 209 5.01e-11 65.9
Msa0164960 AT4G40010.1 31.847 157 91 6 249 399 1 147 5.07e-11 65.1
Msa0164960 AT5G23580.1 26.724 232 142 9 258 471 28 249 5.59e-11 65.9
Msa0164960 AT3G15220.1 26.797 153 108 2 251 403 14 162 6.44e-11 65.9
Msa0164960 AT5G19450.2 30.719 153 100 4 252 400 57 207 6.71e-11 65.5
Msa0164960 AT5G19450.1 30.719 153 100 4 252 400 57 207 6.71e-11 65.5
Msa0164960 AT4G29810.1 29.121 182 116 5 235 411 53 226 7.10e-11 64.7
Msa0164960 AT1G33770.1 32.164 171 107 6 234 399 121 287 7.34e-11 65.9
Msa0164960 AT1G74740.1 31.250 176 108 5 256 427 63 229 7.68e-11 65.5
Msa0164960 AT1G49580.1 29.412 153 96 4 279 427 180 324 8.14e-11 65.5
Msa0164960 AT4G29810.3 29.121 182 116 5 235 411 62 235 9.12e-11 64.3
Msa0164960 AT1G66750.1 34.211 152 89 6 253 399 12 157 9.21e-11 64.3
Msa0164960 AT4G29810.2 29.121 182 116 5 235 411 62 235 9.23e-11 64.7

Find 134 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAACACATTCTCCGGTTTA+AGG 0.167457 1_4:-44908144 None:intergenic
ATGTTGTTGGGCAGCCTTTA+AGG 0.173778 1_4:+44908614 Msa0164960:CDS
TCCTTGATTATTTCTATATA+AGG 0.186285 1_4:-44906531 None:intergenic
CCTTCTCCTTTAATAATTTC+AGG 0.201454 1_4:-44908487 None:intergenic
GGAGATTCTGGAAACCTTAA+AGG 0.266914 1_4:-44908628 None:intergenic
CGAACACCGTTCAAAGGTTC+TGG 0.281686 1_4:+44908571 Msa0164960:CDS
AGACATTATCATCATAATTA+TGG 0.289252 1_4:+44906587 Msa0164960:CDS
TTGGCGCCTGAAATTATTAA+AGG 0.315108 1_4:+44908481 Msa0164960:CDS
CTATTCAGCCACTGTCTATT+CGG 0.317932 1_4:+44906871 Msa0164960:CDS
AAGCTGACAGTAGGAGATTC+TGG 0.319263 1_4:-44908640 None:intergenic
TGCAGAAGTTCTCCTTGCTT+TGG 0.324779 1_4:+44908087 Msa0164960:CDS
CTTATATCATTTGCCTTATG+AGG 0.331403 1_4:-44907088 None:intergenic
TCTATAGGCAAGACGGTGTT+GGG 0.334697 1_4:-44908704 None:intergenic
GAACGGATGTTGTTTGATTT+CGG 0.346145 1_4:-44908737 None:intergenic
CCTTGATTATTTCTATATAA+GGG 0.352324 1_4:-44906530 None:intergenic
TCAGGCTGCATTGCACAGGC+TGG 0.354497 1_4:-44908292 None:intergenic
CGTTCTTTCACAATGTGAAC+TGG 0.362879 1_4:+44908755 Msa0164960:CDS
GGTTTCATCATCATTGGTCT+TGG 0.367706 1_4:-44908811 None:intergenic
GACTGAGAATTGTAATTCTT+CGG 0.368041 1_4:-44906812 None:intergenic
TTCTTATACGAACTCTTGTT+TGG 0.369049 1_4:+44908547 Msa0164960:CDS
CGGGGAATCCCTGATGTTAT+AGG 0.370257 1_4:-44906494 None:intergenic
AGATTGGGAAGTGGAGATAT+AGG 0.370938 1_4:+44907181 Msa0164960:CDS
GAAGTTGGAATGAACCCTTC+TGG 0.376380 1_4:+44908850 Msa0164960:CDS
TAAGGGAGGCCGCGAAGAAC+GGG 0.378316 1_4:-44906513 None:intergenic
TAACTACATAGCTGTTTAGA+TGG 0.380890 1_4:-44906625 None:intergenic
ACCACGATGTTTAATGTTGT+TGG 0.384486 1_4:+44908601 Msa0164960:CDS
ATCATTGGTCTTGGTACCTC+TGG 0.387078 1_4:-44908802 None:intergenic
AGAACTTGAGTCAAAATTCT+CGG 0.389980 1_4:-44906729 None:intergenic
AGTGAGTGTGTGAGTGTTGA+TGG 0.390003 1_4:+44906926 Msa0164960:CDS
CTGTGGATTGGTGGACGTTC+GGG 0.406089 1_4:+44908521 Msa0164960:CDS
GAGTTTGGTTTCATCATCAT+TGG 0.411212 1_4:-44908817 None:intergenic
GCTGTGGATTGGTGGACGTT+CGG 0.420545 1_4:+44908520 Msa0164960:CDS
TTCGGTAGCTCCGCGTCTAT+AGG 0.426540 1_4:-44908719 None:intergenic
TCATTAAAATCACTGAAATT+CGG 0.427397 1_4:-44906974 None:intergenic
TTCATCACTAACATCACTTC+CGG 0.432251 1_4:-44907029 None:intergenic
TACTGTCAGCTTTGCTGCAA+GGG 0.433649 1_4:+44908651 Msa0164960:CDS
GTCTATAGGCAAGACGGTGT+TGG 0.435613 1_4:-44908705 None:intergenic
AAGAAACAATGGAAGGTTGC+CGG 0.439220 1_4:+44906670 Msa0164960:CDS
TTGGAGTACTTGCACATGCT+TGG 0.440491 1_4:+44908106 Msa0164960:CDS
GACATTGACCGCGCACTTGT+TGG 0.440756 1_4:-44908436 None:intergenic
CAGATTTCGATCTCTCTCTA+AGG 0.441317 1_4:+44908194 Msa0164960:CDS
TTTAGAATATTGAAGAGATT+GGG 0.441585 1_4:+44907166 Msa0164960:CDS
GACACTCTCTTGCTTGGTAA+TGG 0.442984 1_4:+44907378 Msa0164960:CDS
GTTGGCTCTGCAACTAGCTC+AGG 0.443144 1_4:-44908418 None:intergenic
CCACGATGTTTAATGTTGTT+GGG 0.443702 1_4:+44908602 Msa0164960:CDS
GTGGCGACCTTCATGCAATC+AGG 0.443810 1_4:+44907413 Msa0164960:CDS
GGTACTCGCTCTACAGATAC+TGG 0.445373 1_4:-44907008 None:intergenic
TGTAGGCACACACGAGTACT+TGG 0.448323 1_4:+44908462 Msa0164960:CDS
GCTCAGGGAGAGGTGTCATT+TGG 0.450141 1_4:-44908402 None:intergenic
CACAGCCTTCCTATAACATC+AGG 0.452461 1_4:+44906485 Msa0164960:CDS
TCTCTCACCAACACATTCTC+CGG 0.454583 1_4:-44908151 None:intergenic
AACTCAACTGAAAATGAAGT+TGG 0.456517 1_4:+44908835 Msa0164960:CDS
ATAGTTTCAACTGCAGTCAT+AGG 0.457366 1_4:-44906422 None:intergenic
GGCTGGCTGAATGCAGTATC+CGG 0.457718 1_4:-44908275 None:intergenic
TGCTTTGTATAAACCTCATA+AGG 0.460243 1_4:+44907075 Msa0164960:CDS
GCAATCAGGCAAAGACAACC+TGG 0.462233 1_4:+44907427 Msa0164960:CDS
GCGCGGTCAATGTCCTTTGT+AGG 0.466444 1_4:+44908445 Msa0164960:CDS
TTTGATGACTTCACTAGAGT+TGG 0.471407 1_4:-44908229 None:intergenic
ATAAGGCAAATGATATAAGA+TGG 0.476777 1_4:+44907092 Msa0164960:CDS
GTGTATCTAGCTGAACTTAG+TGG 0.478590 1_4:+44907208 Msa0164960:CDS
TTAACAACGGCTCGTTTCGA+TGG 0.483495 1_4:-44906785 None:intergenic
GACTGAGACACTCTCTTGCT+TGG 0.489683 1_4:+44907372 Msa0164960:CDS
GCAGTCAGGCTGCATTGCAC+AGG 0.499747 1_4:-44908296 None:intergenic
GATTGCATGAAGGTCGCCAC+CGG 0.501221 1_4:-44907410 None:intergenic
CTTCTTACGAGTCGCAAGCT+CGG 0.502532 1_4:-44907269 None:intergenic
CTACTGTCAGCTTTGCTGCA+AGG 0.509881 1_4:+44908650 Msa0164960:CDS
ATCACTGAAACTAAAAGCTC+CGG 0.510058 1_4:+44908256 Msa0164960:CDS
CAGGGATTCCCCGTTCTTCG+CGG 0.512241 1_4:+44906504 Msa0164960:CDS
TCAAAGTGTGTATATAATGT+AGG 0.514064 1_4:-44907349 None:intergenic
GTCTTTGCCTGATTGCATGA+AGG 0.516240 1_4:-44907420 None:intergenic
ACGAGCTCGCGAGGGGATGT+TGG 0.520707 1_4:+44907132 Msa0164960:CDS
ATTCTAAATAATTTCCAGAA+GGG 0.525758 1_4:-44908864 None:intergenic
TAGTAACTGTTCTGAGGACT+AGG 0.528414 1_4:-44906851 None:intergenic
ACACTCACTGACTTCAGTAC+TGG 0.535887 1_4:-44906912 None:intergenic
CATGCATGTTGGATGCAGTC+AGG 0.536354 1_4:-44908310 None:intergenic
ATAAGGGAGGCCGCGAAGAA+CGG 0.539279 1_4:-44906514 None:intergenic
AATGTGTTGGTGAGAGAAGA+TGG 0.540509 1_4:+44908157 Msa0164960:CDS
ATTGGTCTTGGTACCTCTGG+AGG 0.546953 1_4:-44908799 None:intergenic
GGTTCAGAATTCAGTTTCTG+AGG 0.551440 1_4:+44906451 Msa0164960:CDS
AATCTACAGAGACCTTAAAC+CGG 0.553690 1_4:+44908132 Msa0164960:CDS
ATATTGAAGAGATTGGGAAG+TGG 0.554065 1_4:+44907172 Msa0164960:CDS
TTTGGTCGAACACCGTTCAA+AGG 0.556119 1_4:+44908565 Msa0164960:CDS
CCCTTATATAGAAATAATCA+AGG 0.559154 1_4:+44906530 Msa0164960:CDS
TAAGGCAAATGATATAAGAT+GGG 0.559236 1_4:+44907093 Msa0164960:CDS
TCAAGCTGTACGAGCTCGCG+AGG 0.560269 1_4:+44907123 Msa0164960:CDS
ATGGAAGTGCTGTGGATTGG+TGG 0.563144 1_4:+44908512 Msa0164960:CDS
AATTCTAAATAATTTCCAGA+AGG 0.569121 1_4:-44908865 None:intergenic
CCTGAAATTATTAAAGGAGA+AGG 0.569143 1_4:+44908487 Msa0164960:CDS
GAACACCGTTCAAAGGTTCT+GGG 0.569944 1_4:+44908572 Msa0164960:CDS
ATAGGAAGGCTGTGGCGTAT+CGG 0.571857 1_4:-44906476 None:intergenic
GCGAGGGGATGTTGGAAATG+AGG 0.572035 1_4:+44907140 Msa0164960:CDS
ATTGCATGAAGGTCGCCACC+GGG 0.573434 1_4:-44907409 None:intergenic
CGATTCCCAGAACCTTTGAA+CGG 0.574792 1_4:-44908577 None:intergenic
AGTATCTGTAGAGCGAGTAC+CGG 0.579881 1_4:+44907010 Msa0164960:CDS
CAGTTCACATTGTGAAAGAA+CGG 0.588245 1_4:-44908754 None:intergenic
GAAGCTACTGAGGGCTCAGA+CGG 0.588647 1_4:+44907288 Msa0164960:CDS
GACATGGAAGTGCTGTGGAT+TGG 0.591538 1_4:+44908509 Msa0164960:CDS
GCTGCAAGGGACTTGATCAG+AGG 0.597259 1_4:+44908664 Msa0164960:CDS
TGCAGTTGAAACTATTGCAG+AGG 0.606600 1_4:+44906430 Msa0164960:CDS
GTTCTTTCACAATGTGAACT+GGG 0.610163 1_4:+44908756 Msa0164960:CDS
CGACTCGTAAGAAGCTACTG+AGG 0.613592 1_4:+44907278 Msa0164960:CDS
TCATATCACGAAAGAAACAA+TGG 0.613967 1_4:+44906659 Msa0164960:CDS
ATTCTTCGGTTGATTAACAA+CGG 0.615263 1_4:-44906798 None:intergenic
TTGGCTCTGCAACTAGCTCA+GGG 0.617198 1_4:-44908417 None:intergenic
CACCGTCTTGCCTATAGACG+CGG 0.620769 1_4:+44908709 Msa0164960:CDS
TGATTATTTCTATATAAGGG+AGG 0.623039 1_4:-44906527 None:intergenic
AAGCTGTACGAGCTCGCGAG+GGG 0.625680 1_4:+44907125 Msa0164960:CDS
AGAAGGACATGGAAGTGCTG+TGG 0.625780 1_4:+44908504 Msa0164960:CDS
CTTGCAGCAAAGCTGACAGT+AGG 0.631317 1_4:-44908649 None:intergenic
CAAGCTGTACGAGCTCGCGA+GGG 0.635118 1_4:+44907124 Msa0164960:CDS
ATTATTAAAGGAGAAGGACA+TGG 0.636670 1_4:+44908493 Msa0164960:CDS
GAATCCCTGATGTTATAGGA+AGG 0.643848 1_4:-44906490 None:intergenic
CCTTAAACCGGAGAATGTGT+TGG 0.644760 1_4:+44908144 Msa0164960:CDS
TGTGCAAGTACTCCAAAGCA+AGG 0.645177 1_4:-44908099 None:intergenic
ATCACGAAAGAAACAATGGA+AGG 0.645959 1_4:+44906663 Msa0164960:CDS
TTTCGCTTCCGAATAGACAG+TGG 0.646206 1_4:-44906879 None:intergenic
GACTCGTAAGAAGCTACTGA+GGG 0.650443 1_4:+44907279 Msa0164960:CDS
TCTGCAACTAGCTCAGGGAG+AGG 0.651424 1_4:-44908412 None:intergenic
CTGATGTTATAGGAAGGCTG+TGG 0.652569 1_4:-44906484 None:intergenic
GCTGAATAGTAACTGTTCTG+AGG 0.653333 1_4:-44906857 None:intergenic
CTTCACTAGAGTTGGACTGA+CGG 0.654161 1_4:-44908221 None:intergenic
CCGCTGCGCTAATCCTCCAG+AGG 0.655966 1_4:+44908786 Msa0164960:CDS
CTATAGGCAAGACGGTGTTG+GGG 0.657836 1_4:-44908703 None:intergenic
GTACTCGTGTGTGCCTACAA+AGG 0.659826 1_4:-44908458 None:intergenic
AAGGGAGGCCGCGAAGAACG+GGG 0.663699 1_4:-44906512 None:intergenic
CAATCAGGCAAAGACAACCT+GGG 0.663791 1_4:+44907428 Msa0164960:CDS
TAGCTGAACTTAGTGGCACA+AGG 0.668425 1_4:+44907215 Msa0164960:CDS
CTCCGCGTCTATAGGCAAGA+CGG 0.671798 1_4:-44908711 None:intergenic
ACAGCCTTCCTATAACATCA+GGG 0.679147 1_4:+44906486 Msa0164960:CDS
TTGCAGAGCCAACAAGTGCG+CGG 0.684202 1_4:+44908428 Msa0164960:CDS
AGCAACACGAGTAGTTTGAG+CGG 0.684691 1_4:+44907052 Msa0164960:CDS
CCTCTGGAGGATTAGCGCAG+CGG 0.691007 1_4:-44908786 None:intergenic
GATGGTAAGTCGTGTGAGAG+CGG 0.692630 1_4:+44906944 Msa0164960:CDS
CCCAACAACATTAAACATCG+TGG 0.694205 1_4:-44908602 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CCTTGATTATTTCTATATAA+GGG - chr1_4:44906533-44906552 None:intergenic 20.0%
!!! TCCTTGATTATTTCTATATA+AGG - chr1_4:44906534-44906553 None:intergenic 20.0%
!! AGACATTATCATCATAATTA+TGG + chr1_4:44906587-44906606 Msa0164960:CDS 20.0%
!! TCATTAAAATCACTGAAATT+CGG - chr1_4:44906977-44906996 None:intergenic 20.0%
!!! TTTTAGAATATTGAAGAGAT+TGG + chr1_4:44907165-44907184 Msa0164960:CDS 20.0%
!!! TTTAGAATATTGAAGAGATT+GGG + chr1_4:44907166-44907185 Msa0164960:CDS 20.0%
!! GTATATAATGTAGGTAAAAA+AGG - chr1_4:44907343-44907362 None:intergenic 20.0%
!! CATATAGATATATAATTGCA+GGG - chr1_4:44907510-44907529 None:intergenic 20.0%
!! ACATATAGATATATAATTGC+AGG - chr1_4:44907511-44907530 None:intergenic 20.0%
!!! TATATAATGGATTTTACAAG+TGG + chr1_4:44907744-44907763 Msa0164960:intron 20.0%
!!! ATTTCTCTAATTTCCATTTT+TGG + chr1_4:44908045-44908064 Msa0164960:intron 20.0%
!!! TTTCTCTAATTTCCATTTTT+GGG + chr1_4:44908046-44908065 Msa0164960:intron 20.0%
!! ATTCTAAATAATTTCCAGAA+GGG - chr1_4:44908867-44908886 None:intergenic 20.0%
!! AATTCTAAATAATTTCCAGA+AGG - chr1_4:44908868-44908887 None:intergenic 20.0%
!!! TGATTATTTCTATATAAGGG+AGG - chr1_4:44906530-44906549 None:intergenic 25.0%
! CCCTTATATAGAAATAATCA+AGG + chr1_4:44906530-44906549 Msa0164960:CDS 25.0%
! ATAAGGCAAATGATATAAGA+TGG + chr1_4:44907092-44907111 Msa0164960:CDS 25.0%
! TAAGGCAAATGATATAAGAT+GGG + chr1_4:44907093-44907112 Msa0164960:CDS 25.0%
! TCAAAGTGTGTATATAATGT+AGG - chr1_4:44907352-44907371 None:intergenic 25.0%
! ATATACAAATCACATTGAAC+AGG - chr1_4:44907568-44907587 None:intergenic 25.0%
!! AAGAAATTATATCGACTACT+AGG - chr1_4:44907721-44907740 None:intergenic 25.0%
! GAAACAGATATCAGTTAATT+TGG + chr1_4:44907880-44907899 Msa0164960:intron 25.0%
! TAGAGAAATGTTAATACACT+TGG - chr1_4:44908034-44908053 None:intergenic 25.0%
!!! TTTTTTCTCTTTGGATTTTC+CGG - chr1_4:44908356-44908375 None:intergenic 25.0%
!!! TAGTCTGAATTTTTTCTCTT+TGG - chr1_4:44908365-44908384 None:intergenic 25.0%
!!! TTCTTCTTCCAGATCTTTTT+TGG + chr1_4:44906559-44906578 Msa0164960:CDS 30.0%
TCTTTGTTCCAAAAAAGATC+TGG - chr1_4:44906570-44906589 None:intergenic 30.0%
TAACTACATAGCTGTTTAGA+TGG - chr1_4:44906628-44906647 None:intergenic 30.0%
TCATATCACGAAAGAAACAA+TGG + chr1_4:44906659-44906678 Msa0164960:CDS 30.0%
AGAACTTGAGTCAAAATTCT+CGG - chr1_4:44906732-44906751 None:intergenic 30.0%
ATTCTTCGGTTGATTAACAA+CGG - chr1_4:44906801-44906820 None:intergenic 30.0%
GACTGAGAATTGTAATTCTT+CGG - chr1_4:44906815-44906834 None:intergenic 30.0%
!! TCAGTGATTTTAATGAGAGT+AGG + chr1_4:44906981-44907000 Msa0164960:CDS 30.0%
TGCTTTGTATAAACCTCATA+AGG + chr1_4:44907075-44907094 Msa0164960:CDS 30.0%
CTTATATCATTTGCCTTATG+AGG - chr1_4:44907091-44907110 None:intergenic 30.0%
TGTAATTTATTAGCCCTGTT+TGG + chr1_4:44907607-44907626 Msa0164960:intron 30.0%
TATCTTATGAAAAGCTCAGT+TGG - chr1_4:44907674-44907693 None:intergenic 30.0%
TGATGAGAACAAACATATAC+TGG - chr1_4:44907829-44907848 None:intergenic 30.0%
TATCAAGAAAGCTATTAGAG+AGG - chr1_4:44907906-44907925 None:intergenic 30.0%
AGTAAGATGTTTATCCTAAC+AGG + chr1_4:44908006-44908025 Msa0164960:intron 30.0%
GTAAGATGTTTATCCTAACA+GGG + chr1_4:44908007-44908026 Msa0164960:intron 30.0%
!!! TTCCATTTTTGGGTTTTTAC+AGG + chr1_4:44908056-44908075 Msa0164960:intron 30.0%
AACCTGTAAAAACCCAAAAA+TGG - chr1_4:44908061-44908080 None:intergenic 30.0%
CCTTCTCCTTTAATAATTTC+AGG - chr1_4:44908490-44908509 None:intergenic 30.0%
CCTGAAATTATTAAAGGAGA+AGG + chr1_4:44908487-44908506 Msa0164960:CDS 30.0%
ATTATTAAAGGAGAAGGACA+TGG + chr1_4:44908493-44908512 Msa0164960:CDS 30.0%
TTCTTATACGAACTCTTGTT+TGG + chr1_4:44908547-44908566 Msa0164960:CDS 30.0%
! ACTTCATTTTCAGTTGAGTT+TGG - chr1_4:44908835-44908854 None:intergenic 30.0%
AACTCAACTGAAAATGAAGT+TGG + chr1_4:44908835-44908854 Msa0164960:CDS 30.0%
ATAGTTTCAACTGCAGTCAT+AGG - chr1_4:44906425-44906444 None:intergenic 35.0%
ATCACGAAAGAAACAATGGA+AGG + chr1_4:44906663-44906682 Msa0164960:CDS 35.0%
TTCATCACTAACATCACTTC+CGG - chr1_4:44907032-44907051 None:intergenic 35.0%
ATATTGAAGAGATTGGGAAG+TGG + chr1_4:44907172-44907191 Msa0164960:CDS 35.0%
CAAGCTGAAAAAGAAAGGAA+TGG - chr1_4:44907485-44907504 None:intergenic 35.0%
AATCACATTGAACAGGAGAT+AGG - chr1_4:44907561-44907580 None:intergenic 35.0%
CTAATCTGGTTATCCAAACA+GGG - chr1_4:44907623-44907642 None:intergenic 35.0%
ACTAATCTGGTTATCCAAAC+AGG - chr1_4:44907624-44907643 None:intergenic 35.0%
CGATAAGTGCTTAACTAATC+TGG - chr1_4:44907637-44907656 None:intergenic 35.0%
! GATTAGTTAAGCACTTATCG+CGG + chr1_4:44907637-44907656 Msa0164960:intron 35.0%
CTGTACTTAATCAACAGCTA+CGG + chr1_4:44907856-44907875 Msa0164960:intron 35.0%
GCTATATGCTTTCATTAGTC+TGG - chr1_4:44907934-44907953 None:intergenic 35.0%
AATCTACAGAGACCTTAAAC+CGG + chr1_4:44908132-44908151 Msa0164960:CDS 35.0%
! TTTGATGACTTCACTAGAGT+TGG - chr1_4:44908232-44908251 None:intergenic 35.0%
!!! AGCTTTTAGTTTCAGTGATC+GGG - chr1_4:44908255-44908274 None:intergenic 35.0%
!!! GAGCTTTTAGTTTCAGTGAT+CGG - chr1_4:44908256-44908275 None:intergenic 35.0%
ATCACTGAAACTAAAAGCTC+CGG + chr1_4:44908256-44908275 Msa0164960:CDS 35.0%
TTGGCGCCTGAAATTATTAA+AGG + chr1_4:44908481-44908500 Msa0164960:CDS 35.0%
ACCACGATGTTTAATGTTGT+TGG + chr1_4:44908601-44908620 Msa0164960:CDS 35.0%
CCACGATGTTTAATGTTGTT+GGG + chr1_4:44908602-44908621 Msa0164960:CDS 35.0%
! GAACGGATGTTGTTTGATTT+CGG - chr1_4:44908740-44908759 None:intergenic 35.0%
CAGTTCACATTGTGAAAGAA+CGG - chr1_4:44908757-44908776 None:intergenic 35.0%
GTTCTTTCACAATGTGAACT+GGG + chr1_4:44908756-44908775 Msa0164960:CDS 35.0%
! GAGTTTGGTTTCATCATCAT+TGG - chr1_4:44908820-44908839 None:intergenic 35.0%
TGCAGTTGAAACTATTGCAG+AGG + chr1_4:44906430-44906449 Msa0164960:CDS 40.0%
GGTTCAGAATTCAGTTTCTG+AGG + chr1_4:44906451-44906470 Msa0164960:CDS 40.0%
ACAGCCTTCCTATAACATCA+GGG + chr1_4:44906486-44906505 Msa0164960:CDS 40.0%
GAATCCCTGATGTTATAGGA+AGG - chr1_4:44906493-44906512 None:intergenic 40.0%
AAGAAACAATGGAAGGTTGC+CGG + chr1_4:44906670-44906689 Msa0164960:CDS 40.0%
!! TGCTTGCTGCATAATTTTGC+CGG - chr1_4:44906692-44906711 None:intergenic 40.0%
!! TAGTAACTGTTCTGAGGACT+AGG - chr1_4:44906854-44906873 None:intergenic 40.0%
GCTGAATAGTAACTGTTCTG+AGG - chr1_4:44906860-44906879 None:intergenic 40.0%
CTATTCAGCCACTGTCTATT+CGG + chr1_4:44906871-44906890 Msa0164960:CDS 40.0%
AGATTGGGAAGTGGAGATAT+AGG + chr1_4:44907181-44907200 Msa0164960:CDS 40.0%
GTGTATCTAGCTGAACTTAG+TGG + chr1_4:44907208-44907227 Msa0164960:CDS 40.0%
!!! TTGGTAATGGAGTTTTGTCC+CGG + chr1_4:44907391-44907410 Msa0164960:CDS 40.0%
!! TGCTCTGAAAAATACTTCCC+AGG - chr1_4:44907448-44907467 None:intergenic 40.0%
GACTACTAGGTACAAATCTC+AGG - chr1_4:44907708-44907727 None:intergenic 40.0%
TAATACACTTGGACCCTGTT+AGG - chr1_4:44908023-44908042 None:intergenic 40.0%
! AATGTGTTGGTGAGAGAAGA+TGG + chr1_4:44908157-44908176 Msa0164960:CDS 40.0%
CAGATTTCGATCTCTCTCTA+AGG + chr1_4:44908194-44908213 Msa0164960:CDS 40.0%
!! AACATGCATGCTTTTTGCCA+CGG + chr1_4:44908323-44908342 Msa0164960:CDS 40.0%
! TTTTTGCCACGGTTTCTATC+CGG + chr1_4:44908334-44908353 Msa0164960:CDS 40.0%
CCCAACAACATTAAACATCG+TGG - chr1_4:44908605-44908624 None:intergenic 40.0%
! GGAGATTCTGGAAACCTTAA+AGG - chr1_4:44908631-44908650 None:intergenic 40.0%
CGTTCTTTCACAATGTGAAC+TGG + chr1_4:44908755-44908774 Msa0164960:CDS 40.0%
! GGTTTCATCATCATTGGTCT+TGG - chr1_4:44908814-44908833 None:intergenic 40.0%
CTGATGTTATAGGAAGGCTG+TGG - chr1_4:44906487-44906506 None:intergenic 45.0%
CACAGCCTTCCTATAACATC+AGG + chr1_4:44906485-44906504 Msa0164960:CDS 45.0%
TTAACAACGGCTCGTTTCGA+TGG - chr1_4:44906788-44906807 None:intergenic 45.0%
TTTCGCTTCCGAATAGACAG+TGG - chr1_4:44906882-44906901 None:intergenic 45.0%
!! ACACTCACTGACTTCAGTAC+TGG - chr1_4:44906915-44906934 None:intergenic 45.0%
!! AGTGAGTGTGTGAGTGTTGA+TGG + chr1_4:44906926-44906945 Msa0164960:CDS 45.0%
AGTATCTGTAGAGCGAGTAC+CGG + chr1_4:44907010-44907029 Msa0164960:CDS 45.0%
AGCAACACGAGTAGTTTGAG+CGG + chr1_4:44907052-44907071 Msa0164960:CDS 45.0%
TAGCTGAACTTAGTGGCACA+AGG + chr1_4:44907215-44907234 Msa0164960:CDS 45.0%
GACTCGTAAGAAGCTACTGA+GGG + chr1_4:44907279-44907298 Msa0164960:CDS 45.0%
GACACTCTCTTGCTTGGTAA+TGG + chr1_4:44907378-44907397 Msa0164960:CDS 45.0%
GTCTTTGCCTGATTGCATGA+AGG - chr1_4:44907423-44907442 None:intergenic 45.0%
CAATCAGGCAAAGACAACCT+GGG + chr1_4:44907428-44907447 Msa0164960:CDS 45.0%
!! ATTTTTCAGAGCACGCTGTC+AGG + chr1_4:44907455-44907474 Msa0164960:CDS 45.0%
GGGAGCAAGCTGAAAAAGAA+AGG - chr1_4:44907490-44907509 None:intergenic 45.0%
TGCAGAAGTTCTCCTTGCTT+TGG + chr1_4:44908087-44908106 Msa0164960:CDS 45.0%
TGTGCAAGTACTCCAAAGCA+AGG - chr1_4:44908102-44908121 None:intergenic 45.0%
! TTGGAGTACTTGCACATGCT+TGG + chr1_4:44908106-44908125 Msa0164960:CDS 45.0%
CCAACACATTCTCCGGTTTA+AGG - chr1_4:44908147-44908166 None:intergenic 45.0%
CCTTAAACCGGAGAATGTGT+TGG + chr1_4:44908144-44908163 Msa0164960:CDS 45.0%
TCTCTCACCAACACATTCTC+CGG - chr1_4:44908154-44908173 None:intergenic 45.0%
CTTCACTAGAGTTGGACTGA+CGG - chr1_4:44908224-44908243 None:intergenic 45.0%
! GTGGCAAAAAGCATGCATGT+TGG - chr1_4:44908324-44908343 None:intergenic 45.0%
! GATTTTCCGGATAGAAACCG+TGG - chr1_4:44908343-44908362 None:intergenic 45.0%
TTTGGTCGAACACCGTTCAA+AGG + chr1_4:44908565-44908584 Msa0164960:CDS 45.0%
GAACACCGTTCAAAGGTTCT+GGG + chr1_4:44908572-44908591 Msa0164960:CDS 45.0%
CGATTCCCAGAACCTTTGAA+CGG - chr1_4:44908580-44908599 None:intergenic 45.0%
ATGTTGTTGGGCAGCCTTTA+AGG + chr1_4:44908614-44908633 Msa0164960:CDS 45.0%
AAGCTGACAGTAGGAGATTC+TGG - chr1_4:44908643-44908662 None:intergenic 45.0%
TACTGTCAGCTTTGCTGCAA+GGG + chr1_4:44908651-44908670 Msa0164960:CDS 45.0%
TCTATAGGCAAGACGGTGTT+GGG - chr1_4:44908707-44908726 None:intergenic 45.0%
!! ATCATTGGTCTTGGTACCTC+TGG - chr1_4:44908805-44908824 None:intergenic 45.0%
GAAGTTGGAATGAACCCTTC+TGG + chr1_4:44908850-44908869 Msa0164960:CDS 45.0%
!! ATAATTTCTTATATATATAA+TGG + chr1_4:44907731-44907750 Msa0164960:intron 5.0%
ATAGGAAGGCTGTGGCGTAT+CGG - chr1_4:44906479-44906498 None:intergenic 50.0%
CGGGGAATCCCTGATGTTAT+AGG - chr1_4:44906497-44906516 None:intergenic 50.0%
GATGGTAAGTCGTGTGAGAG+CGG + chr1_4:44906944-44906963 Msa0164960:CDS 50.0%
GGTACTCGCTCTACAGATAC+TGG - chr1_4:44907011-44907030 None:intergenic 50.0%
CTTCTTACGAGTCGCAAGCT+CGG - chr1_4:44907272-44907291 None:intergenic 50.0%
CGACTCGTAAGAAGCTACTG+AGG + chr1_4:44907278-44907297 Msa0164960:CDS 50.0%
GACTGAGACACTCTCTTGCT+TGG + chr1_4:44907372-44907391 Msa0164960:CDS 50.0%
!! GTAATGGAGTTTTGTCCCGG+TGG + chr1_4:44907394-44907413 Msa0164960:CDS 50.0%
GCAATCAGGCAAAGACAACC+TGG + chr1_4:44907427-44907446 Msa0164960:CDS 50.0%
CATGCATGTTGGATGCAGTC+AGG - chr1_4:44908313-44908332 None:intergenic 50.0%
!! TTGGCTCTGCAACTAGCTCA+GGG - chr1_4:44908420-44908439 None:intergenic 50.0%
GTACTCGTGTGTGCCTACAA+AGG - chr1_4:44908461-44908480 None:intergenic 50.0%
TGTAGGCACACACGAGTACT+TGG + chr1_4:44908462-44908481 Msa0164960:CDS 50.0%
!! AGAAGGACATGGAAGTGCTG+TGG + chr1_4:44908504-44908523 Msa0164960:CDS 50.0%
!! GACATGGAAGTGCTGTGGAT+TGG + chr1_4:44908509-44908528 Msa0164960:CDS 50.0%
!! ATGGAAGTGCTGTGGATTGG+TGG + chr1_4:44908512-44908531 Msa0164960:CDS 50.0%
CGAACACCGTTCAAAGGTTC+TGG + chr1_4:44908571-44908590 Msa0164960:CDS 50.0%
CTTGCAGCAAAGCTGACAGT+AGG - chr1_4:44908652-44908671 None:intergenic 50.0%
CTACTGTCAGCTTTGCTGCA+AGG + chr1_4:44908650-44908669 Msa0164960:CDS 50.0%
! CTATAGGCAAGACGGTGTTG+GGG - chr1_4:44908706-44908725 None:intergenic 50.0%
GTCTATAGGCAAGACGGTGT+TGG - chr1_4:44908708-44908727 None:intergenic 50.0%
!! ATTGGTCTTGGTACCTCTGG+AGG - chr1_4:44908802-44908821 None:intergenic 50.0%
ATAAGGGAGGCCGCGAAGAA+CGG - chr1_4:44906517-44906536 None:intergenic 55.0%
GCGAGGGGATGTTGGAAATG+AGG + chr1_4:44907140-44907159 Msa0164960:CDS 55.0%
GAAGCTACTGAGGGCTCAGA+CGG + chr1_4:44907288-44907307 Msa0164960:CDS 55.0%
ATTGCATGAAGGTCGCCACC+GGG - chr1_4:44907412-44907431 None:intergenic 55.0%
GATTGCATGAAGGTCGCCAC+CGG - chr1_4:44907413-44907432 None:intergenic 55.0%
GTGGCGACCTTCATGCAATC+AGG + chr1_4:44907413-44907432 Msa0164960:CDS 55.0%
! GGCTGGCTGAATGCAGTATC+CGG - chr1_4:44908278-44908297 None:intergenic 55.0%
!! GCTCAGGGAGAGGTGTCATT+TGG - chr1_4:44908405-44908424 None:intergenic 55.0%
TCTGCAACTAGCTCAGGGAG+AGG - chr1_4:44908415-44908434 None:intergenic 55.0%
!! GTTGGCTCTGCAACTAGCTC+AGG - chr1_4:44908421-44908440 None:intergenic 55.0%
TTGCAGAGCCAACAAGTGCG+CGG + chr1_4:44908428-44908447 Msa0164960:CDS 55.0%
GACATTGACCGCGCACTTGT+TGG - chr1_4:44908439-44908458 None:intergenic 55.0%
GCGCGGTCAATGTCCTTTGT+AGG + chr1_4:44908445-44908464 Msa0164960:CDS 55.0%
!! GCTGTGGATTGGTGGACGTT+CGG + chr1_4:44908520-44908539 Msa0164960:CDS 55.0%
!! CTGTGGATTGGTGGACGTTC+GGG + chr1_4:44908521-44908540 Msa0164960:CDS 55.0%
GCTGCAAGGGACTTGATCAG+AGG + chr1_4:44908664-44908683 Msa0164960:CDS 55.0%
CACCGTCTTGCCTATAGACG+CGG + chr1_4:44908709-44908728 Msa0164960:CDS 55.0%
CTCCGCGTCTATAGGCAAGA+CGG - chr1_4:44908714-44908733 None:intergenic 55.0%
TTCGGTAGCTCCGCGTCTAT+AGG - chr1_4:44908722-44908741 None:intergenic 55.0%
CAGGGATTCCCCGTTCTTCG+CGG + chr1_4:44906504-44906523 Msa0164960:CDS 60.0%
TAAGGGAGGCCGCGAAGAAC+GGG - chr1_4:44906516-44906535 None:intergenic 60.0%
TCAAGCTGTACGAGCTCGCG+AGG + chr1_4:44907123-44907142 Msa0164960:CDS 60.0%
CAAGCTGTACGAGCTCGCGA+GGG + chr1_4:44907124-44907143 Msa0164960:CDS 60.0%
AAGCTGTACGAGCTCGCGAG+GGG + chr1_4:44907125-44907144 Msa0164960:CDS 60.0%
TCAGGCTGCATTGCACAGGC+TGG - chr1_4:44908295-44908314 None:intergenic 60.0%
GCAGTCAGGCTGCATTGCAC+AGG - chr1_4:44908299-44908318 None:intergenic 60.0%
! CCTCTGGAGGATTAGCGCAG+CGG - chr1_4:44908789-44908808 None:intergenic 60.0%
AAGGGAGGCCGCGAAGAACG+GGG - chr1_4:44906515-44906534 None:intergenic 65.0%
ACGAGCTCGCGAGGGGATGT+TGG + chr1_4:44907132-44907151 Msa0164960:CDS 65.0%
CCGCTGCGCTAATCCTCCAG+AGG + chr1_4:44908786-44908805 Msa0164960:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 44906413 44908900 44906413 ID=Msa0164960;Name=Msa0164960
chr1_4 mRNA 44906413 44908900 44906413 ID=Msa0164960-mRNA-1;Parent=Msa0164960;Name=Msa0164960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|628
chr1_4 exon 44906413 44907476 44906413 ID=Msa0164960-mRNA-1:exon:12903;Parent=Msa0164960-mRNA-1
chr1_4 exon 44908078 44908900 44908078 ID=Msa0164960-mRNA-1:exon:12904;Parent=Msa0164960-mRNA-1
chr1_4 CDS 44906413 44907476 44906413 ID=Msa0164960-mRNA-1:cds;Parent=Msa0164960-mRNA-1
chr1_4 CDS 44908078 44908900 44908078 ID=Msa0164960-mRNA-1:cds;Parent=Msa0164960-mRNA-1
Gene Sequence

>Msa0164960

ATGGAGTCTCCTATGACTGCAGTTGAAACTATTGCAGAGGTTCAGAATTCAGTTTCTGAGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTTCTTCGCGGCCTCCCTTATATAGAAATAATCAAGGAGCTTCTTCTTCTTCCAGATCTTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTAAACAGCTATGTAGTTAATCAAAAGCATTCATATCACGAAAGAAACAATGGAAGGTTGCCGGCAAAATTATGCAGCAAGCAAATGTTTGATGATGATTCCGAGAATTTTGACTCAAGTTCTGAAGTATTAGAATCTGACAATAGTATCTTAGTTCCATCGAAACGAGCCGTTGTTAATCAACCGAAGAATTACAATTCTCAGTCAGAGACTAGTTTTTGTCCTAGTCCTCAGAACAGTTACTATTCAGCCACTGTCTATTCGGAAGCGAAACAAAGTTTCACCAGTACTGAAGTCAGTGAGTGTGTGAGTGTTGATGGTAAGTCGTGTGAGAGCGGAGAAGTTCCGAATTTCAGTGATTTTAATGAGAGTAGGAAAACCAGTATCTGTAGAGCGAGTACCGGAAGTGATGTTAGTGATGAAAGCAACACGAGTAGTTTGAGCGGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTACGAGCTCGCGAGGGGATGTTGGAAATGAGGCATTTTAGAATATTGAAGAGATTGGGAAGTGGAGATATAGGAAATGTGTATCTAGCTGAACTTAGTGGCACAAGGACTTCTTTTGCTATGAAACTCATGAACAAAACCGAGCTTGCGACTCGTAAGAAGCTACTGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCTACATTATATACACACTTTGAGACTGAGACACTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATGCAATCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTACAGAGACCTTAAACCGGAGAATGTGTTGGTGAGAGAAGATGGTCATATCATGCTCTCAGATTTCGATCTCTCTCTAAGGTGCACCGTCAGTCCAACTCTAGTGAAGTCATCAAACCCGATCACTGAAACTAAAAGCTCCGGATACTGCATTCAGCCAGCCTGTGCAATGCAGCCTGACTGCATCCAACATGCATGCTTTTTGCCACGGTTTCTATCCGGAAAATCCAAAGAGAAAAAATTCAGACTAAAGAATGACATGCATCACCAAATGACACCTCTCCCTGAGCTAGTTGCAGAGCCAACAAGTGCGCGGTCAATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGAGAAGGACATGGAAGTGCTGTGGATTGGTGGACGTTCGGGATATTCTTATACGAACTCTTGTTTGGTCGAACACCGTTCAAAGGTTCTGGGAATCGAACCACGATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCCCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCGTTCTTTCACAATGTGAACTGGGCACTGATCCGCTGCGCTAATCCTCCAGAGGTACCAAGACCAATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGAAATTATTTAGAATTTGATTACTTTTGA
Protein sequence

>Msa0164960

MESPMTAVETIAEVQNSVSEVPIRHSLPITSGIPRSSRPPLYRNNQGASSSSRSFLEQRHYHHNYGTKKIHHLNSYVVNQKHSYHERNNGRLPAKLCSKQMFDDDSENFDSSSEVLESDNSILVPSKRAVVNQPKNYNSQSETSFCPSPQNSYYSATVYSEAKQSFTSTEVSECVSVDGKSCESGEVPNFSDFNESRKTSICRASTGSDVSDESNTSSLSGALYKPHKANDIRWEAIQAVRAREGMLEMRHFRILKRLGSGDIGNVYLAELSGTRTSFAMKLMNKTELATRKKLLRAQTEREILQSLDHPFLPTLYTHFETETLSCLVMEFCPGGDLHAIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPITETKSSGYCIQPACAMQPDCIQHACFLPRFLSGKSKEKKFRLKNDMHHQMTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSGNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRPMMMKPNSTENEVGMNPSGNYLEFDYF*