AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0166110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166110 MtrunA17_Chr1g0180451 98.361 122 2 0 421 542 175 296 8.76e-87 270
Msa0166110 MtrunA17_Chr6g0460371 84.173 139 21 1 175 313 83 220 5.90e-73 246
Msa0166110 MtrunA17_Chr7g0264731 83.607 122 20 0 421 542 172 293 2.90e-72 232
Msa0166110 MtrunA17_Chr2g0327411 67.769 121 38 1 421 540 189 309 1.12e-54 186
Msa0166110 MtrunA17_Chr4g0028221 67.500 120 39 0 421 540 185 304 2.28e-54 186
Msa0166110 MtrunA17_Chr5g0396491 86.567 67 8 1 1 66 123 189 3.06e-28 117
Msa0166110 MtrunA17_Chr4g0038851 75.862 58 14 0 1 58 115 172 1.30e-23 103
Msa0166110 MtrunA17_Chr8g0365231 37.121 132 72 3 420 540 179 310 3.09e-21 94.7
Msa0166110 MtrunA17_Chr1g0161951 37.302 126 72 3 421 540 167 291 6.86e-20 90.9
Msa0166110 MtrunA17_Chr8g0375981 38.281 128 69 5 421 540 165 290 2.75e-19 89.4
Msa0166110 MtrunA17_Chr1g0206681 36.434 129 73 5 421 540 163 291 5.41e-19 87.8
Msa0166110 MtrunA17_Chr3g0085681 64.286 56 20 0 3 58 94 149 1.58e-17 85.1
Msa0166110 MtrunA17_Chr4g0034381 78.723 47 10 0 55 101 134 180 6.83e-17 80.9
Msa0166110 MtrunA17_Chr7g0252631 35.659 129 72 5 421 540 161 287 1.55e-16 80.5
Msa0166110 MtrunA17_Chr7g0258911 35.433 127 75 3 421 540 153 279 1.62e-16 80.1
Msa0166110 MtrunA17_Chr7g0252621 35.659 129 72 5 421 540 161 287 1.96e-16 80.1
Msa0166110 MtrunA17_Chr4g0023961 35.036 137 72 5 420 540 153 288 2.18e-16 80.1
Msa0166110 MtrunA17_Chr4g0072681 34.091 132 75 3 421 540 112 243 2.69e-16 79.0
Msa0166110 MtrunA17_Chr5g0410621 33.077 130 77 2 421 540 176 305 4.08e-16 80.1
Msa0166110 MtrunA17_Chr4g0072611 33.858 127 77 3 421 540 154 280 4.59e-16 79.0
Msa0166110 MtrunA17_Chr2g0323161 32.593 135 76 3 421 540 152 286 5.12e-16 79.0
Msa0166110 MtrunA17_Chr4g0072601 33.562 146 85 5 404 540 141 283 1.52e-15 77.4
Msa0166110 MtrunA17_Chr7g0252601 34.646 127 76 4 421 540 161 287 1.56e-15 77.4
Msa0166110 MtrunA17_Chr3g0122031 37.903 124 70 3 421 540 157 277 1.64e-15 77.0
Msa0166110 MtrunA17_Chr3g0122021 37.903 124 70 3 421 540 157 277 1.84e-15 77.0
Msa0166110 MtrunA17_Chr4g0072641 35.878 131 69 6 414 540 29 148 1.94e-15 73.9
Msa0166110 MtrunA17_Chr2g0328811 97.222 36 1 0 383 418 93 128 2.11e-15 78.2
Msa0166110 MtrunA17_Chr8g0377841 36.290 124 73 3 421 540 160 281 2.39e-15 76.6
Msa0166110 MtrunA17_Chr3g0085361 58.929 56 23 0 3 58 9 64 2.49e-15 77.8
Msa0166110 MtrunA17_Chr3g0096651 37.302 126 71 4 421 540 159 282 5.34e-15 75.9
Msa0166110 MtrunA17_Chr6g0486581 32.824 131 77 4 421 540 153 283 1.78e-14 74.3
Msa0166110 MtrunA17_Chr4g0071341 32.812 128 78 3 421 540 154 281 2.39e-14 73.6
Msa0166110 MtrunA17_Chr6g0461761 33.071 127 78 4 421 540 161 287 2.51e-14 73.9
Msa0166110 MtrunA17_Chr6g0461731 33.071 127 78 4 421 540 184 310 3.61e-14 73.6
Msa0166110 MtrunA17_Chr1g0206081 33.083 133 71 5 421 540 167 294 4.60e-14 73.2
Msa0166110 MtrunA17_Chr8g0382041 33.083 133 75 3 418 540 166 294 7.83e-14 72.8
Msa0166110 MtrunA17_Chr4g0072671 34.351 131 75 3 421 540 155 285 9.74e-14 72.0
Msa0166110 MtrunA17_Chr5g0443391 33.065 124 77 4 421 540 157 278 2.31e-13 70.9
Msa0166110 MtrunA17_Chr2g0299061 31.206 141 67 5 421 540 155 286 6.20e-13 69.7
Msa0166110 MtrunA17_Chr7g0258001 80.556 36 7 0 383 418 93 128 1.06e-12 69.7
Msa0166110 MtrunA17_Chr1g0173711 77.778 36 8 0 383 418 93 128 1.69e-12 69.3
Msa0166110 MtrunA17_Chr4g0054431 30.709 127 80 4 421 540 162 287 5.28e-12 66.6
Msa0166110 MtrunA17_Chr4g0054451 30.709 127 80 4 421 540 164 289 5.43e-12 66.6
Msa0166110 MtrunA17_Chr7g0235541 34.375 128 69 6 421 540 87 207 9.06e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166110 AT2G36870.1 81.818 121 22 0 421 541 178 298 2.36e-67 220
Msa0166110 AT1G17760.1 62.590 139 51 1 175 313 83 220 2.97e-55 198
Msa0166110 AT3G44990.1 66.667 120 40 0 421 540 174 293 6.23e-47 166
Msa0166110 AT1G50420.1 68.421 57 18 0 2 58 127 183 4.02e-20 94.0
Msa0166110 AT1G10550.1 35.252 139 67 4 421 540 175 309 7.77e-20 90.9
Msa0166110 AT4G14130.1 38.462 130 68 4 421 540 157 284 9.62e-20 90.1
Msa0166110 AT1G14720.1 34.921 126 76 3 421 540 165 290 1.38e-18 87.4
Msa0166110 AT5G57550.1 39.130 115 67 2 421 532 159 273 1.80e-18 86.3
Msa0166110 AT3G23730.1 35.115 131 74 4 421 540 156 286 3.94e-18 85.5
Msa0166110 AT1G32170.1 37.692 130 69 4 421 540 166 293 8.58e-18 85.5
Msa0166110 AT5G57530.1 36.719 128 72 5 421 540 156 282 5.17e-17 82.0
Msa0166110 AT2G01850.1 34.921 126 76 3 421 540 165 290 6.02e-17 82.8
Msa0166110 AT4G25820.1 40.602 133 69 7 416 540 155 285 7.17e-17 81.6
Msa0166110 AT5G57540.1 37.008 127 73 5 421 540 155 281 8.85e-17 81.3
Msa0166110 AT1G11545.1 37.500 136 63 5 421 540 170 299 1.26e-16 81.3
Msa0166110 AT4G30290.1 37.500 128 67 4 421 540 154 276 4.07e-16 79.3
Msa0166110 AT2G14620.2 34.109 129 76 5 421 540 116 244 4.25e-16 78.6
Msa0166110 AT4G30280.1 37.500 128 67 4 421 540 159 281 4.76e-16 79.3
Msa0166110 AT2G14620.3 34.109 129 76 5 421 540 105 233 5.23e-16 78.2
Msa0166110 AT1G65310.1 37.903 124 72 4 421 540 159 281 5.28e-16 79.0
Msa0166110 AT2G14620.1 34.109 129 76 5 421 540 166 294 5.77e-16 79.3
Msa0166110 AT1G65310.2 37.903 124 72 4 421 540 181 303 5.98e-16 79.3
Msa0166110 AT5G57560.1 34.815 135 68 5 421 540 152 281 8.91e-16 78.6
Msa0166110 AT5G13870.2 34.646 127 76 4 421 540 161 287 9.87e-16 78.6
Msa0166110 AT5G13870.1 34.646 127 76 4 421 540 161 287 9.87e-16 78.6
Msa0166110 AT5G13870.3 34.646 127 76 4 421 540 161 287 9.87e-16 78.6
Msa0166110 AT4G25810.1 35.659 129 74 5 421 540 155 283 1.47e-15 77.8
Msa0166110 AT4G37800.1 35.433 127 74 3 421 540 164 289 5.12e-15 76.3
Msa0166110 AT5G65730.1 35.433 127 74 4 421 540 165 290 5.29e-15 76.3
Msa0166110 AT4G18990.2 31.915 141 73 4 421 540 100 238 1.05e-14 75.1
Msa0166110 AT4G18990.1 31.915 141 73 4 421 540 174 312 1.69e-14 75.5
Msa0166110 AT4G03210.2 31.618 136 70 3 421 540 128 256 1.75e-14 74.3
Msa0166110 AT4G03210.1 31.387 137 71 3 420 540 155 284 1.83e-14 74.7
Msa0166110 AT4G34360.1 68.085 47 15 0 55 101 129 175 2.05e-14 73.6
Msa0166110 AT5G48070.1 32.812 128 73 4 421 540 159 281 3.81e-14 73.6
Msa0166110 AT4G13080.1 30.769 130 84 3 416 540 163 291 8.37e-14 72.8
Msa0166110 AT1G51260.1 31.707 164 79 3 316 469 16 156 1.11e-13 73.2
Msa0166110 AT3G25050.1 29.921 127 83 2 421 541 164 290 1.15e-13 72.0
Msa0166110 AT2G06850.2 33.333 129 75 5 421 540 104 230 4.70e-13 69.3
Msa0166110 AT2G06850.1 33.333 129 75 5 421 540 164 290 7.01e-13 70.1
Msa0166110 AT2G18800.1 30.000 140 78 5 421 540 157 296 7.76e-13 70.1
Msa0166110 AT4G30270.1 33.871 124 67 5 421 540 153 265 1.76e-12 68.2
Msa0166110 AT3G57650.1 75.000 36 9 0 383 418 92 127 1.01e-11 67.4
Msa0166110 AT4G13090.1 30.827 133 74 3 421 540 161 288 2.06e-11 65.5

Find 132 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTGTAAAGTGAATAAATT+TGG 0.094868 1_4:+47104302 Msa0166110:three_prime_UTR
AATAATACTAGCAAATTATT+TGG 0.178448 1_4:-47104339 None:intergenic
TTAAGACCAATGTGGGTTTA+TGG 0.181249 1_4:+47103989 Msa0166110:CDS
GCCCTCGCACTATTAAATTT+TGG 0.193492 1_4:-47100473 None:intergenic
TGTGGGTTTATGGTTCTATT+TGG 0.204208 1_4:+47103999 Msa0166110:CDS
TAAACCCACATTGGTCTTAA+TGG 0.225559 1_4:-47103986 None:intergenic
ACTATTGCCAAGATCCTAAA+AGG 0.237364 1_4:+47104239 Msa0166110:CDS
GATACTTTCCTGAATAAATT+AGG 0.247966 1_4:+47099124 Msa0166110:CDS
AGTGACATTGATTGGCTTAT+TGG 0.258738 1_4:+47101995 Msa0166110:CDS
GCAATATCTATGCAGGTTAT+AGG 0.262706 1_4:+47102346 Msa0166110:intron
TTTAAATTCTTTCTTCATAA+TGG 0.266444 1_4:-47102216 None:intergenic
TGCCAACACCTAATTTATTC+AGG 0.275041 1_4:-47099132 None:intergenic
ATAATATATTCTCTTGGTTA+TGG 0.286140 1_4:+47099526 Msa0166110:CDS
CTTCCTTGGATACCTCCTTA+TGG 0.290542 1_4:-47103948 None:intergenic
ATTGTAAAGTGAATAAATTT+GGG 0.292679 1_4:+47104303 Msa0166110:three_prime_UTR
GAATAAATTTGGGGATGATT+TGG 0.292944 1_4:+47104313 Msa0166110:three_prime_UTR
AAGATTTAACCCCAACATTC+AGG 0.298689 1_4:-47104277 None:intergenic
TCAAGCTATTGTTGAGTCTA+TGG 0.304822 1_4:+47098659 Msa0166110:CDS
GCATTTATCTCGATAACTTT+TGG 0.306930 1_4:+47098954 Msa0166110:CDS
TCATCAACACCGCAAGTTAC+TGG 0.315214 1_4:+47101018 Msa0166110:CDS
AGGAACAGAAATTTGCCTTT+TGG 0.316696 1_4:-47100568 None:intergenic
GTCTATGGAAGGTGAGAAAA+TGG 0.336276 1_4:+47098674 Msa0166110:CDS
CTACATTGAAAGGTGTTCAT+AGG 0.336704 1_4:+47098913 Msa0166110:CDS
TTCCTTGGATACCTCCTTAT+GGG 0.339071 1_4:-47103947 None:intergenic
GTGGGTTTATGGTTCTATTT+GGG 0.354310 1_4:+47104000 Msa0166110:CDS
CAGGATATATTACCAACTTC+TGG 0.358258 1_4:-47100347 None:intergenic
CCCATCACATTGAACAACTT+TGG 0.363703 1_4:+47100292 Msa0166110:CDS
TTGGCTTATTGGATGGGTCT+TGG 0.364550 1_4:+47102006 Msa0166110:CDS
ATCTGATGTGTTTCTTCTTG+TGG 0.368845 1_4:-47100225 None:intergenic
TAGACTAACACCTGAATGTT+GGG 0.370136 1_4:+47104267 Msa0166110:CDS
TATTGGATGGGTCTTGGCTC+AGG 0.379258 1_4:+47102012 Msa0166110:CDS
AACAATGTACAGATTCTTAG+TGG 0.388025 1_4:+47103916 Msa0166110:intron
ATCACAGGAGTGACATTGAT+TGG 0.396953 1_4:+47101987 Msa0166110:intron
AGCCTTTCTAAAGTCATTGC+CGG 0.398907 1_4:+47100102 Msa0166110:CDS
TTACATTCGTTTCATTAGAA+AGG 0.412653 1_4:+47099671 Msa0166110:CDS
TCCAAAGTTGTTCAATGTGA+TGG 0.413856 1_4:-47100293 None:intergenic
AATGTTGCATCACTCTTCCT+TGG 0.414150 1_4:-47103962 None:intergenic
AACATTCAGGTGTTAGTCTA+TGG 0.416142 1_4:-47104264 None:intergenic
ATGCTTGCTGTACCACCAAC+TGG 0.416506 1_4:+47100542 Msa0166110:CDS
TTTGTGTACTTTGCAACAAA+AGG 0.422740 1_4:-47104079 None:intergenic
TTCATTATAATATATTCTCT+TGG 0.436209 1_4:+47099520 Msa0166110:CDS
CGGCCACGGCCTCGCCGTAT+CGG 0.441815 1_4:+47104149 Msa0166110:CDS
GGATTTGAAATCAAAGCTAT+AGG 0.445820 1_4:-47099074 None:intergenic
TGCAAAGTACACAAACTTCA+AGG 0.447145 1_4:+47104087 Msa0166110:CDS
TAGAAAGGTTAATGATAAGA+AGG 0.454228 1_4:+47099686 Msa0166110:CDS
GTACCACAAGGCAGACCTCC+TGG 0.463458 1_4:-47099583 None:intergenic
ATATATGCTACCTTCAAGAA+AGG 0.471982 1_4:-47098627 None:intergenic
GTTTCAGACTTCGGATTCCA+TGG 0.472468 1_4:-47098873 None:intergenic
TGATACAGCAGGTGCTGCTC+AGG 0.476534 1_4:+47099168 Msa0166110:CDS
AACAACATTGGTCTATGACT+TGG 0.477924 1_4:+47104191 Msa0166110:CDS
TCACAGCGCACGGGTTGCCT+TGG 0.481689 1_4:+47102182 Msa0166110:intron
TACATTGAAAGGTGTTCATA+GGG 0.482070 1_4:+47098914 Msa0166110:CDS
TCATCATGGGCAACAGAAGA+TGG 0.483074 1_4:+47104028 Msa0166110:CDS
CATTGATTGGCTTATTGGAT+GGG 0.486891 1_4:+47102000 Msa0166110:CDS
TGCGTCGCGTTGGTGTCGTC+CGG 0.489754 1_4:+47104129 Msa0166110:CDS
ACAACATTGGTCTATGACTT+GGG 0.490056 1_4:+47104192 Msa0166110:CDS
TTTATGTAATGTTTCTCTGT+TGG 0.493844 1_4:+47104436 Msa0166110:three_prime_UTR
GCGTTGGTGTCGTCCGGCCA+CGG 0.495474 1_4:+47104135 Msa0166110:CDS
AGCATCAGGCCCTGTGTGGA+TGG 0.495690 1_4:+47100072 Msa0166110:CDS
ACACCGCAAGTTACTGGATG+TGG 0.502867 1_4:+47101024 Msa0166110:CDS
CTATTTGGGATGCTTCATCA+TGG 0.504142 1_4:+47104014 Msa0166110:CDS
CCAAAGTTGTTCAATGTGAT+GGG 0.504943 1_4:-47100292 None:intergenic
GCCTCGCCGTATCGGTCCGG+TGG 0.507497 1_4:+47104157 Msa0166110:CDS
TTCCTGAATAAATTAGGTGT+TGG 0.511000 1_4:+47099130 Msa0166110:CDS
ACGGCCTCGCCGTATCGGTC+CGG 0.518193 1_4:+47104154 Msa0166110:CDS
GGATCAGACATAATAGCATC+AGG 0.520650 1_4:+47100058 Msa0166110:intron
TAGTGGATGATATGCCCATA+AGG 0.525035 1_4:+47103933 Msa0166110:CDS
TATATGCTACCTTCAAGAAA+GGG 0.525617 1_4:-47098626 None:intergenic
TACCACAAGGCAGACCTCCT+GGG 0.528966 1_4:-47099582 None:intergenic
AGAAAGGTTAATGATAAGAA+GGG 0.532915 1_4:+47099687 Msa0166110:CDS
ACCACCAACTGGATCCCAAA+AGG 0.534706 1_4:+47100553 Msa0166110:CDS
AAAAGAGCAATCCATTGTGC+AGG 0.535750 1_4:-47098726 None:intergenic
GAAAATGTTGATGATACAGC+AGG 0.537015 1_4:+47099157 Msa0166110:CDS
CGATACGGCGAGGCCGTGGC+CGG 0.537351 1_4:-47104148 None:intergenic
TTGGACATAGTTTCAGACTT+CGG 0.539407 1_4:-47098882 None:intergenic
ACATTGATTGGCTTATTGGA+TGG 0.541072 1_4:+47101999 Msa0166110:CDS
ATTTCCATTAAGACCAATGT+GGG 0.541185 1_4:+47103982 Msa0166110:CDS
AACCGGCAATGACTTTAGAA+AGG 0.541989 1_4:-47100104 None:intergenic
AAGTTCTGTTAGCCAGAAGT+TGG 0.544913 1_4:+47100335 Msa0166110:CDS
TATTTGGGATGCTTCATCAT+GGG 0.549893 1_4:+47104015 Msa0166110:CDS
GGACCGATACGGCGAGGCCG+TGG 0.552441 1_4:-47104152 None:intergenic
AACCAAAATTTAATAGTGCG+AGG 0.552564 1_4:+47100471 Msa0166110:CDS
TTTCGTTGGTCACAGCGCAC+GGG 0.554146 1_4:+47102173 Msa0166110:intron
GAATTTATGCTCAGCCATGT+TGG 0.558855 1_4:+47099745 Msa0166110:CDS
ATAGACTAACACCTGAATGT+TGG 0.559466 1_4:+47104266 Msa0166110:CDS
ACCCCAGGAGGTCTGCCTTG+TGG 0.562053 1_4:+47099580 Msa0166110:CDS
CGAGGGCAGTATACAGAGAA+CGG 0.564609 1_4:+47100489 Msa0166110:CDS
AAGGTCATGTCTACATTGAA+AGG 0.565200 1_4:+47098903 Msa0166110:CDS
TTGTAAAGTGAATAAATTTG+GGG 0.568123 1_4:+47104304 Msa0166110:three_prime_UTR
TGTACTTTGCAACAAAAGGT+TGG 0.568903 1_4:-47104075 None:intergenic
GCACAGCCTATGCGTCGCGT+TGG 0.570367 1_4:+47104119 Msa0166110:CDS
GTCAACCCACCGGACCGATA+CGG 0.571686 1_4:-47104163 None:intergenic
TTTCAGACTTCGGATTCCAT+GGG 0.572108 1_4:-47098872 None:intergenic
ACGACACCAACGCGACGCAT+AGG 0.572730 1_4:-47104125 None:intergenic
ACCAAAATTTAATAGTGCGA+GGG 0.577057 1_4:+47100472 Msa0166110:CDS
TGCCCATAAGGAGGTATCCA+AGG 0.578122 1_4:+47103945 Msa0166110:CDS
GAAAGGTTAATGATAAGAAG+GGG 0.579902 1_4:+47099688 Msa0166110:CDS
TTTCAATGTAGACATGACCT+TGG 0.582305 1_4:-47098901 None:intergenic
TATAGGATAGTGGTGACCCA+TGG 0.588816 1_4:+47098856 Msa0166110:intron
CTATTGCCAAGATCCTAAAA+GGG 0.591532 1_4:+47104240 Msa0166110:CDS
GAAAAGATGAATAAAAGCAA+TGG 0.594933 1_4:-47101054 None:intergenic
AGTTGTTCAATGTGATGGGT+AGG 0.596093 1_4:-47100288 None:intergenic
AACATTAGTAACATTTGCAG+AGG 0.597066 1_4:-47100588 None:intergenic
CCTCGCCGTATCGGTCCGGT+GGG 0.599396 1_4:+47104158 Msa0166110:CDS
TACACAAACTTCAAGGCTAG+TGG 0.607850 1_4:+47104094 Msa0166110:CDS
TTGTGAGGAAAGTCTATCAG+AGG 0.607948 1_4:+47100253 Msa0166110:CDS
TTGTTGTCTTGTCAACCCAC+CGG 0.610498 1_4:-47104173 None:intergenic
CATTTCCATTAAGACCAATG+TGG 0.615461 1_4:+47103981 Msa0166110:CDS
GAAGTCTGAAACTATGTCCA+AGG 0.615623 1_4:+47098884 Msa0166110:CDS
TCACAGAAGAGTATCATCAC+TGG 0.616361 1_4:+47100943 Msa0166110:intron
GCTATTGTTGAGTCTATGGA+AGG 0.617292 1_4:+47098663 Msa0166110:CDS
TAATGGCCATCGTGCTACCA+AGG 0.618127 1_4:-47102199 None:intergenic
TTGGGTTCAAAGACACCACA+TGG 0.626679 1_4:+47104210 Msa0166110:CDS
GCTATGTACTCCATCCACAC+AGG 0.627247 1_4:-47100082 None:intergenic
CACATCAGATGACTGTTGTG+AGG 0.630283 1_4:+47100238 Msa0166110:CDS
AAAGGTTAATGATAAGAAGG+GGG 0.633601 1_4:+47099689 Msa0166110:CDS
CTATGTACTCCATCCACACA+GGG 0.637483 1_4:-47100081 None:intergenic
AGAAGAGTATCATCACTGGT+AGG 0.641883 1_4:+47100947 Msa0166110:intron
TAATAGCATCAGGCCCTGTG+TGG 0.645875 1_4:+47100068 Msa0166110:CDS
ATGCTGCTGAACCTGCACAA+TGG 0.650823 1_4:+47098715 Msa0166110:CDS
ATTCCACATCCAGTAACTTG+CGG 0.653450 1_4:-47101027 None:intergenic
GGTTGACAAGACAACAACAT+TGG 0.653516 1_4:+47104179 Msa0166110:CDS
TGGTAAACAACTTACCAACA+TGG 0.655023 1_4:-47099759 None:intergenic
ATAGAACCATAAACCCACAT+TGG 0.658123 1_4:-47103995 None:intergenic
GGCAATAGTTATAAACCATG+TGG 0.659315 1_4:-47104225 None:intergenic
ACCACAAGGCAGACCTCCTG+GGG 0.661047 1_4:-47099581 None:intergenic
AGACTAACACCTGAATGTTG+GGG 0.661530 1_4:+47104268 Msa0166110:CDS
TGTGAGGAAAGTCTATCAGA+GGG 0.681127 1_4:+47100254 Msa0166110:CDS
TGGATGATATGCCCATAAGG+AGG 0.688479 1_4:+47103936 Msa0166110:CDS
GGGTTGCCTTGGTAGCACGA+TGG 0.694385 1_4:+47102193 Msa0166110:CDS
CCCACCGGACCGATACGGCG+AGG 0.695099 1_4:-47104158 None:intergenic
GTGTTGATGATCGTGACTTG+CGG 0.696353 1_4:-47101005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTACAAAATATTTTAATTGA+AGG - chr1_4:47101166-47101185 None:intergenic 10.0%
!!! ACTTCATTTTTTTAATTTAA+GGG + chr1_4:47101267-47101286 Msa0166110:intron 10.0%
!! ATAAGTTTAAAAATTTAAAG+AGG - chr1_4:47101561-47101580 None:intergenic 10.0%
!!! CAATTTTAAATAATAAATCA+AGG - chr1_4:47103528-47103547 None:intergenic 10.0%
!!! TTTTTTTTATTTCAATCTAA+TGG + chr1_4:47103629-47103648 Msa0166110:intron 10.0%
!!! AGTGATTTTTATTTTTATTT+TGG + chr1_4:47103827-47103846 Msa0166110:intron 10.0%
!!! GTGATTTTTATTTTTATTTT+GGG + chr1_4:47103828-47103847 Msa0166110:intron 10.0%
!!! GTTATTTTTTTAATTTTTCA+TGG + chr1_4:47104371-47104390 Msa0166110:three_prime_UTR 10.0%
!!! TATTTTTTTAATTTTTCATG+GGG + chr1_4:47104373-47104392 Msa0166110:three_prime_UTR 10.0%
!! TTCATTATAATATATTCTCT+TGG + chr1_4:47099520-47099539 Msa0166110:CDS 15.0%
!! AACTAAAATACAAAACTAAT+AGG - chr1_4:47099789-47099808 None:intergenic 15.0%
!!! ATTAAATTTTGGTTGATATT+CGG - chr1_4:47100465-47100484 None:intergenic 15.0%
!!! TAAAATTTTAAGAACTTCAA+GGG - chr1_4:47100627-47100646 None:intergenic 15.0%
!!! TTAAAATTTTAAGAACTTCA+AGG - chr1_4:47100628-47100647 None:intergenic 15.0%
!!! TTTACATTGATTGATTTTAT+TGG + chr1_4:47100684-47100703 Msa0166110:intron 15.0%
!!! TTACATTGATTGATTTTATT+GGG + chr1_4:47100685-47100704 Msa0166110:intron 15.0%
!!! ATACTATATGATTCTATTTT+TGG - chr1_4:47101129-47101148 None:intergenic 15.0%
!!! CACTTCATTTTTTTAATTTA+AGG + chr1_4:47101266-47101285 Msa0166110:intron 15.0%
!!! TTTTTTTTCTTCTTAAATGA+AGG + chr1_4:47101306-47101325 Msa0166110:intron 15.0%
!!! TTTTTTTCTTCTTAAATGAA+GGG + chr1_4:47101307-47101326 Msa0166110:intron 15.0%
!! TAATATTACTTCAAATTACA+AGG + chr1_4:47102105-47102124 Msa0166110:intron 15.0%
!! AATATTACTTCAAATTACAA+GGG + chr1_4:47102106-47102125 Msa0166110:intron 15.0%
!! TTTAAATTCTTTCTTCATAA+TGG - chr1_4:47102219-47102238 None:intergenic 15.0%
!! TTATTCTTAAACATTGTAAT+TGG - chr1_4:47102834-47102853 None:intergenic 15.0%
!! AAAAATTCAATAATGTAACT+TGG + chr1_4:47103308-47103327 Msa0166110:intron 15.0%
!! AAAATTCAATAATGTAACTT+GGG + chr1_4:47103309-47103328 Msa0166110:intron 15.0%
!! TTCAAAGAAAATGATATTAT+TGG - chr1_4:47103439-47103458 None:intergenic 15.0%
!!! TAATTTTATAATAAGGTATG+CGG - chr1_4:47103770-47103789 None:intergenic 15.0%
!!! GTGAAACTAATTTTATAATA+AGG - chr1_4:47103777-47103796 None:intergenic 15.0%
!! AAATAAAAATCACTTTCATA+TGG - chr1_4:47103821-47103840 None:intergenic 15.0%
!! TATTGTAAAGTGAATAAATT+TGG + chr1_4:47104302-47104321 Msa0166110:three_prime_UTR 15.0%
!! ATTGTAAAGTGAATAAATTT+GGG + chr1_4:47104303-47104322 Msa0166110:three_prime_UTR 15.0%
!! AATAATACTAGCAAATTATT+TGG - chr1_4:47104342-47104361 None:intergenic 15.0%
!! ATCCTATAAAAATAGTCATA+TGG - chr1_4:47098844-47098863 None:intergenic 20.0%
!! AAAACCATATACTATAATTG+GGG - chr1_4:47099336-47099355 None:intergenic 20.0%
!! GAAAACCATATACTATAATT+GGG - chr1_4:47099337-47099356 None:intergenic 20.0%
!! AGAAAACCATATACTATAAT+TGG - chr1_4:47099338-47099357 None:intergenic 20.0%
!! CAAAAAATATTTATTTGGCT+TGG + chr1_4:47099457-47099476 Msa0166110:intron 20.0%
!! ATAATATATTCTCTTGGTTA+TGG + chr1_4:47099526-47099545 Msa0166110:CDS 20.0%
!!! GTATCACTTTTCAAAATTTT+GGG + chr1_4:47100177-47100196 Msa0166110:intron 20.0%
!!! AGTTTTTTGATGAAATTGAT+TGG + chr1_4:47100516-47100535 Msa0166110:CDS 20.0%
!!! GTTCTTAAAATTTTAAGTTC+TGG + chr1_4:47100632-47100651 Msa0166110:intron 20.0%
!! AAAGTTAAATTCAAAGTTTG+AGG + chr1_4:47100767-47100786 Msa0166110:intron 20.0%
!! AGAATTTAATACATAGAGAA+GGG - chr1_4:47100871-47100890 None:intergenic 20.0%
!! TAGAATTTAATACATAGAGA+AGG - chr1_4:47100872-47100891 None:intergenic 20.0%
!!! GAATCATATAGTATGTTTTT+AGG + chr1_4:47101135-47101154 Msa0166110:intron 20.0%
!!! TGTTAGTTTTGAATCTAATA+TGG + chr1_4:47101421-47101440 Msa0166110:intron 20.0%
!! TTCAGAAACATTTCAATTAT+TGG + chr1_4:47101845-47101864 Msa0166110:intron 20.0%
!! TCAGAAACATTTCAATTATT+GGG + chr1_4:47101846-47101865 Msa0166110:intron 20.0%
!!! GTAAGTTAATATAGTTTGTT+AGG + chr1_4:47101868-47101887 Msa0166110:intron 20.0%
!! TGCTCAAAATAAATTAGTAT+AGG + chr1_4:47101905-47101924 Msa0166110:intron 20.0%
!!! CAAAGAATTTTGCATATAAT+AGG - chr1_4:47102044-47102063 None:intergenic 20.0%
!!! ATATTCTATTTCTTTTTCGT+TGG + chr1_4:47102159-47102178 Msa0166110:intron 20.0%
!!! GTAAATTTAGAATTGCATTA+AGG + chr1_4:47102283-47102302 Msa0166110:intron 20.0%
!!! ATAAATAAATCCAAGCATTT+TGG + chr1_4:47102439-47102458 Msa0166110:intron 20.0%
!! TAATTATGTAGCATATTTCA+AGG + chr1_4:47102732-47102751 Msa0166110:intron 20.0%
!! AATTATGTAGCATATTTCAA+GGG + chr1_4:47102733-47102752 Msa0166110:intron 20.0%
!! AAATTAATTAAAATCTCCCT+TGG + chr1_4:47102853-47102872 Msa0166110:intron 20.0%
!!! TTTTTTTCGGATAATTTTGT+TGG - chr1_4:47103242-47103261 None:intergenic 20.0%
!! CATTATTCCCAAAAAAAAAA+TGG + chr1_4:47103699-47103718 Msa0166110:intron 20.0%
!!! ATTAGTGCCATTTTTTTTTT+GGG - chr1_4:47103709-47103728 None:intergenic 20.0%
!!! TATTAGTGCCATTTTTTTTT+TGG - chr1_4:47103710-47103729 None:intergenic 20.0%
!! TTGTAAAGTGAATAAATTTG+GGG + chr1_4:47104304-47104323 Msa0166110:three_prime_UTR 20.0%
!!! TGCCATATGACTATTTTTAT+AGG + chr1_4:47098839-47098858 Msa0166110:intron 25.0%
!!! TGACTATTTTTATAGGATAG+TGG + chr1_4:47098846-47098865 Msa0166110:intron 25.0%
! GATACTTTCCTGAATAAATT+AGG + chr1_4:47099124-47099143 Msa0166110:CDS 25.0%
! AAAATGTATGGAGCTAATTA+CGG - chr1_4:47099267-47099286 None:intergenic 25.0%
! AAACCATATACTATAATTGG+GGG - chr1_4:47099335-47099354 None:intergenic 25.0%
! AGCATTAGTAAATTAGTCAA+TGG - chr1_4:47099374-47099393 None:intergenic 25.0%
!!! GTTTTATTCTTCTTGCTTAT+AGG + chr1_4:47099643-47099662 Msa0166110:intron 25.0%
! TTACATTCGTTTCATTAGAA+AGG + chr1_4:47099671-47099690 Msa0166110:CDS 25.0%
! TAGAAAGGTTAATGATAAGA+AGG + chr1_4:47099686-47099705 Msa0166110:CDS 25.0%
! AGAAAGGTTAATGATAAGAA+GGG + chr1_4:47099687-47099706 Msa0166110:CDS 25.0%
! ATACAAAACTAATAGGACAA+TGG - chr1_4:47099782-47099801 None:intergenic 25.0%
!! ACCTTTTTATGAGATGATAA+TGG + chr1_4:47099828-47099847 Msa0166110:intron 25.0%
! TCCATTATCATCTCATAAAA+AGG - chr1_4:47099832-47099851 None:intergenic 25.0%
!! GTTATGCAATTCTTATTTCT+TGG + chr1_4:47100143-47100162 Msa0166110:intron 25.0%
!! TTATTTCTTGGTGCATAATT+TGG + chr1_4:47100155-47100174 Msa0166110:intron 25.0%
!!! GGTATCACTTTTCAAAATTT+TGG + chr1_4:47100176-47100195 Msa0166110:intron 25.0%
! TACATATTATCAAATCAAGC+AGG - chr1_4:47100369-47100388 None:intergenic 25.0%
! TGATTCTGTAGTTTCTATTA+AGG + chr1_4:47100393-47100412 Msa0166110:intron 25.0%
!!! CTTAAAATTTTAAGTTCTGG+TGG + chr1_4:47100635-47100654 Msa0166110:intron 25.0%
! TTGTAAGATATAACCATGTA+TGG + chr1_4:47100913-47100932 Msa0166110:intron 25.0%
! GAAAAGATGAATAAAAGCAA+TGG - chr1_4:47101057-47101076 None:intergenic 25.0%
!!! AGTATCAACTCTTTTTAAGA+TGG - chr1_4:47101208-47101227 None:intergenic 25.0%
!!! TATTTCATCATCTTTAGAGT+TGG + chr1_4:47101229-47101248 Msa0166110:intron 25.0%
!!! GTTTTGAATCTAATATGGTT+TGG + chr1_4:47101426-47101445 Msa0166110:intron 25.0%
!!! CAGAGGTTTTTTTTATCAAT+TGG + chr1_4:47101473-47101492 Msa0166110:intron 25.0%
!!! CTTTTTAACTGTGTATAAGA+TGG - chr1_4:47101716-47101735 None:intergenic 25.0%
!!! TTATGACTTTTGATGATCTA+TGG + chr1_4:47101753-47101772 Msa0166110:intron 25.0%
! AATTTGCAAGTGAAAATTTC+AGG + chr1_4:47101938-47101957 Msa0166110:intron 25.0%
! TACAAAGAACAAAAAAAGAG+AGG - chr1_4:47102266-47102285 None:intergenic 25.0%
!!! ACTTATTTCTAGAAAGAAAC+TGG + chr1_4:47102392-47102411 Msa0166110:intron 25.0%
!!! CTTATTTCTAGAAAGAAACT+GGG + chr1_4:47102393-47102412 Msa0166110:intron 25.0%
! GAACTGGAAAAAATAATACA+CGG - chr1_4:47102500-47102519 None:intergenic 25.0%
! CTCAGCAATAAAAAATAACA+TGG - chr1_4:47102546-47102565 None:intergenic 25.0%
! GTTATCTTTAAACTTATTCC+AGG + chr1_4:47102580-47102599 Msa0166110:intron 25.0%
! AACAGAAGAAACTTGATTAT+TGG + chr1_4:47102698-47102717 Msa0166110:intron 25.0%
! ATTATGTAGCATATTTCAAG+GGG + chr1_4:47102734-47102753 Msa0166110:intron 25.0%
! TCTATAATAAAAGACCAAGT+AGG - chr1_4:47103063-47103082 None:intergenic 25.0%
!!! TGAGTATTTTTGATATGCTA+AGG + chr1_4:47103156-47103175 Msa0166110:intron 25.0%
! GTTTGATTCTTACAGAATAT+AGG + chr1_4:47103356-47103375 Msa0166110:intron 25.0%
! GGAACCTTACTAATTATAAA+TGG + chr1_4:47103667-47103686 Msa0166110:intron 25.0%
!!! AGTGCCATTTATAATTAGTA+AGG - chr1_4:47103674-47103693 None:intergenic 25.0%
!!! GATCTACATGTGTTTTTTTA+TGG + chr1_4:47103740-47103759 Msa0166110:intron 25.0%
!! ACATTGACACAACAAATTTT+TGG + chr1_4:47104413-47104432 Msa0166110:three_prime_UTR 25.0%
! TTTATGTAATGTTTCTCTGT+TGG + chr1_4:47104436-47104455 Msa0166110:three_prime_UTR 25.0%
TATATGCTACCTTCAAGAAA+GGG - chr1_4:47098629-47098648 None:intergenic 30.0%
ATATATGCTACCTTCAAGAA+AGG - chr1_4:47098630-47098649 None:intergenic 30.0%
!! TACATTGAAAGGTGTTCATA+GGG + chr1_4:47098914-47098933 Msa0166110:CDS 30.0%
! GCATTTATCTCGATAACTTT+TGG + chr1_4:47098954-47098973 Msa0166110:CDS 30.0%
! GGATTTGAAATCAAAGCTAT+AGG - chr1_4:47099077-47099096 None:intergenic 30.0%
! ATCAAGTACTGCATGAAAAA+AGG - chr1_4:47099098-47099117 None:intergenic 30.0%
TTCCTGAATAAATTAGGTGT+TGG + chr1_4:47099130-47099149 Msa0166110:CDS 30.0%
AGTACAGTGAACAAAATGTA+TGG - chr1_4:47099279-47099298 None:intergenic 30.0%
ATTCCCCCAATTATAGTATA+TGG + chr1_4:47099329-47099348 Msa0166110:intron 30.0%
TTATTCTTCTTGCTTATAGG+CGG + chr1_4:47099646-47099665 Msa0166110:intron 30.0%
GAAAGGTTAATGATAAGAAG+GGG + chr1_4:47099688-47099707 Msa0166110:CDS 30.0%
AAAGGTTAATGATAAGAAGG+GGG + chr1_4:47099689-47099708 Msa0166110:CDS 30.0%
TTTGTGCTTCTTAGTTTATG+CGG + chr1_4:47099955-47099974 Msa0166110:intron 30.0%
CACACAAAAGATTAACTAAC+CGG - chr1_4:47100124-47100143 None:intergenic 30.0%
ACACCTTATCATCAAAATGT+AGG - chr1_4:47100419-47100438 None:intergenic 30.0%
AACCAAAATTTAATAGTGCG+AGG + chr1_4:47100471-47100490 Msa0166110:CDS 30.0%
ACCAAAATTTAATAGTGCGA+GGG + chr1_4:47100472-47100491 Msa0166110:CDS 30.0%
AACATTAGTAACATTTGCAG+AGG - chr1_4:47100591-47100610 None:intergenic 30.0%
TGCACTTAGTAACAACAAAA+CGG - chr1_4:47100722-47100741 None:intergenic 30.0%
TTTGAGGAGAAGTTTGATAA+TGG + chr1_4:47100783-47100802 Msa0166110:intron 30.0%
!! TTGTTGAAGTTTTAGCATTC+AGG + chr1_4:47101092-47101111 Msa0166110:CDS 30.0%
TTTAGCATTCAGGTAAGATT+TGG + chr1_4:47101102-47101121 Msa0166110:intron 30.0%
! GGTTTAAGACCCAAATTTAA+TGG + chr1_4:47101447-47101466 Msa0166110:intron 30.0%
CCTCTGAATCCATTAAATTT+GGG - chr1_4:47101459-47101478 None:intergenic 30.0%
ACCTCTGAATCCATTAAATT+TGG - chr1_4:47101460-47101479 None:intergenic 30.0%
TTTATCAATTGGTATTCTGC+AGG + chr1_4:47101484-47101503 Msa0166110:intron 30.0%
! AGGATTTGAACTGTTACTTA+TGG + chr1_4:47101504-47101523 Msa0166110:intron 30.0%
! GGATTTGAACTGTTACTTAT+GGG + chr1_4:47101505-47101524 Msa0166110:intron 30.0%
TATCCAAGGTTAAGAAATTG+TGG - chr1_4:47101665-47101684 None:intergenic 30.0%
CTTGGATAATGATTACAAGA+GGG + chr1_4:47101677-47101696 Msa0166110:intron 30.0%
GGATACTCGACAAATTAATA+GGG - chr1_4:47101799-47101818 None:intergenic 30.0%
!! CTATTAATTTGTCGAGTATC+CGG + chr1_4:47101798-47101817 Msa0166110:intron 30.0%
!! TATTAATTTGTCGAGTATCC+GGG + chr1_4:47101799-47101818 Msa0166110:intron 30.0%
GGCATTATTTGAAGAATTTG+AGG - chr1_4:47102525-47102544 None:intergenic 30.0%
! TTTTATTGCTGAGTTTTCAG+TGG + chr1_4:47102553-47102572 Msa0166110:intron 30.0%
! TTCAAACCTGAGTTTGTTTA+TGG + chr1_4:47102666-47102685 Msa0166110:intron 30.0%
AATCAAGTTTCTTCTGTTGT+AGG - chr1_4:47102696-47102715 None:intergenic 30.0%
! AAGTTTTACTTGAATCCGTA+AGG + chr1_4:47102783-47102802 Msa0166110:intron 30.0%
! AAGCTTGAAAATCTTTTGTG+TGG + chr1_4:47102880-47102899 Msa0166110:intron 30.0%
!!! GCACTTCTCTTTTTTCTTTT+TGG + chr1_4:47103013-47103032 Msa0166110:intron 30.0%
! AATATAGCTCTATACCTACT+TGG + chr1_4:47103046-47103065 Msa0166110:intron 30.0%
!!! AAACAGTTTGTTTTTGCTAG+AGG + chr1_4:47103089-47103108 Msa0166110:intron 30.0%
! AATATAGCTCTATACCTACT+TGG + chr1_4:47103046-47103065 Msa0166110:intron 30.0%
CATGATTAAAAAGACCAAGT+AGG - chr1_4:47103138-47103157 None:intergenic 30.0%
! ACGAATGATTGACATTTTGT+AGG + chr1_4:47103397-47103416 Msa0166110:intron 30.0%
! TGACATTTTGTAGGATGAAA+TGG + chr1_4:47103406-47103425 Msa0166110:intron 30.0%
TCTAATGGTCATGATATTGA+AGG + chr1_4:47103644-47103663 Msa0166110:intron 30.0%
CTAATGGTCATGATATTGAA+GGG + chr1_4:47103645-47103664 Msa0166110:intron 30.0%
TAATGGTCATGATATTGAAG+GGG + chr1_4:47103646-47103665 Msa0166110:intron 30.0%
TTTATAATAAGGTATGCGGT+TGG - chr1_4:47103766-47103785 None:intergenic 30.0%
ATATGGCTGCAATTGTATAA+TGG - chr1_4:47103804-47103823 None:intergenic 30.0%
AACAATGTACAGATTCTTAG+TGG + chr1_4:47103916-47103935 Msa0166110:intron 30.0%
ATTTCCATTAAGACCAATGT+GGG + chr1_4:47103982-47104001 Msa0166110:CDS 30.0%
TTTGTGTACTTTGCAACAAA+AGG - chr1_4:47104082-47104101 None:intergenic 30.0%
GAATAAATTTGGGGATGATT+TGG + chr1_4:47104313-47104332 Msa0166110:three_prime_UTR 30.0%
! TGAACTTTTCCCTTTCTTGA+AGG + chr1_4:47098617-47098636 Msa0166110:CDS 35.0%
TCAAGCTATTGTTGAGTCTA+TGG + chr1_4:47098659-47098678 Msa0166110:CDS 35.0%
AAGTATTCATCAGCGAAAAG+AGG + chr1_4:47098751-47098770 Msa0166110:intron 35.0%
!!! AAAAGAGGTTTTGGAGCAAA+TGG + chr1_4:47098766-47098785 Msa0166110:intron 35.0%
!!! AAAGAGGTTTTGGAGCAAAT+GGG + chr1_4:47098767-47098786 Msa0166110:intron 35.0%
AATAGTCATATGGCATTGCA+CGG - chr1_4:47098834-47098853 None:intergenic 35.0%
TTGGACATAGTTTCAGACTT+CGG - chr1_4:47098885-47098904 None:intergenic 35.0%
TTTCAATGTAGACATGACCT+TGG - chr1_4:47098904-47098923 None:intergenic 35.0%
AAGGTCATGTCTACATTGAA+AGG + chr1_4:47098903-47098922 Msa0166110:CDS 35.0%
!! CTACATTGAAAGGTGTTCAT+AGG + chr1_4:47098913-47098932 Msa0166110:CDS 35.0%
!!! CATAGGGTTTTGAAAGCAAA+TGG + chr1_4:47098930-47098949 Msa0166110:CDS 35.0%
AACAGTTCATTCTTCAAACC+TGG - chr1_4:47098980-47098999 None:intergenic 35.0%
TGCCAACACCTAATTTATTC+AGG - chr1_4:47099135-47099154 None:intergenic 35.0%
!! GAAAATGTTGATGATACAGC+AGG + chr1_4:47099157-47099176 Msa0166110:CDS 35.0%
TGGTAAACAACTTACCAACA+TGG - chr1_4:47099762-47099781 None:intergenic 35.0%
! ATAATGGAATCTCACCTAAG+TGG + chr1_4:47099844-47099863 Msa0166110:intron 35.0%
TAATGGAATCTCACCTAAGT+GGG + chr1_4:47099845-47099864 Msa0166110:intron 35.0%
! TTTTCCAATGATGTGCTAAC+AGG + chr1_4:47100037-47100056 Msa0166110:intron 35.0%
TTTGGGTCAATTACAATTGC+AGG + chr1_4:47100194-47100213 Msa0166110:intron 35.0%
ATCTGATGTGTTTCTTCTTG+TGG - chr1_4:47100228-47100247 None:intergenic 35.0%
CCAAAGTTGTTCAATGTGAT+GGG - chr1_4:47100295-47100314 None:intergenic 35.0%
TCCAAAGTTGTTCAATGTGA+TGG - chr1_4:47100296-47100315 None:intergenic 35.0%
CAGGATATATTACCAACTTC+TGG - chr1_4:47100350-47100369 None:intergenic 35.0%
!! AGGCCTACATTTTGATGATA+AGG + chr1_4:47100413-47100432 Msa0166110:intron 35.0%
!! TTGATGATAAGGTGTTTTGC+AGG + chr1_4:47100424-47100443 Msa0166110:intron 35.0%
! GGAACAGAAATTTGCCTTTT+GGG - chr1_4:47100570-47100589 None:intergenic 35.0%
! AGGAACAGAAATTTGCCTTT+TGG - chr1_4:47100571-47100590 None:intergenic 35.0%
GATATAACCATGTATGGTGA+TGG + chr1_4:47100919-47100938 Msa0166110:intron 35.0%
ACTGGTAGGAAAAAACTCTA+GGG + chr1_4:47100961-47100980 Msa0166110:CDS 35.0%
!! CCCAAATTTAATGGATTCAG+AGG + chr1_4:47101456-47101475 Msa0166110:intron 35.0%
! TGTTACTTATGGGTACTCTT+TGG + chr1_4:47101515-47101534 Msa0166110:intron 35.0%
ATGCCACAATTTCTTAACCT+TGG + chr1_4:47101659-47101678 Msa0166110:intron 35.0%
CCTCTTGTAATCATTATCCA+AGG - chr1_4:47101679-47101698 None:intergenic 35.0%
CCTTGGATAATGATTACAAG+AGG + chr1_4:47101676-47101695 Msa0166110:intron 35.0%
CGGATACTCGACAAATTAAT+AGG - chr1_4:47101800-47101819 None:intergenic 35.0%
ATACAACACAATCTACAACC+CGG - chr1_4:47101820-47101839 None:intergenic 35.0%
!! AGTGACATTGATTGGCTTAT+TGG + chr1_4:47101995-47102014 Msa0166110:CDS 35.0%
!! ACATTGATTGGCTTATTGGA+TGG + chr1_4:47101999-47102018 Msa0166110:CDS 35.0%
!! CATTGATTGGCTTATTGGAT+GGG + chr1_4:47102000-47102019 Msa0166110:CDS 35.0%
GAGGTTTAGAGAAACATACA+GGG - chr1_4:47102247-47102266 None:intergenic 35.0%
AGAGGTTTAGAGAAACATAC+AGG - chr1_4:47102248-47102267 None:intergenic 35.0%
CAACATTGCAATATCTATGC+AGG + chr1_4:47102339-47102358 Msa0166110:intron 35.0%
GCAATATCTATGCAGGTTAT+AGG + chr1_4:47102346-47102365 Msa0166110:intron 35.0%
TATCTATGCAGGTTATAGGT+TGG + chr1_4:47102350-47102369 Msa0166110:intron 35.0%
TCATCAAAAGCCAAAATGCT+TGG - chr1_4:47102452-47102471 None:intergenic 35.0%
TGAAGAATTTGAGGATGAAC+TGG - chr1_4:47102516-47102535 None:intergenic 35.0%
CATCTATACCATGATCCTTA+CGG - chr1_4:47102801-47102820 None:intergenic 35.0%
!! ATTTTCAAGCTTCAAGCCAA+GGG - chr1_4:47102872-47102891 None:intergenic 35.0%
CTGACTAAAGGACTGATAAA+AGG - chr1_4:47102910-47102929 None:intergenic 35.0%
TTTATCAGTCCTTTAGTCAG+TGG + chr1_4:47102910-47102929 Msa0166110:intron 35.0%
! TTTTGCCAGTGATGATACTA+TGG + chr1_4:47102936-47102955 Msa0166110:intron 35.0%
AATCACCATAGTATCATCAC+TGG - chr1_4:47102944-47102963 None:intergenic 35.0%
!! AGAAAAAAGAGAAGTGCTAC+AGG - chr1_4:47103010-47103029 None:intergenic 35.0%
!!! AGTTTGTTTTTGCTAGAGGT+AGG + chr1_4:47103093-47103112 Msa0166110:intron 35.0%
GCTGCAATTGTATAATGGTA+TGG - chr1_4:47103799-47103818 None:intergenic 35.0%
CATTTCCATTAAGACCAATG+TGG + chr1_4:47103981-47104000 Msa0166110:CDS 35.0%
!! TAAACCCACATTGGTCTTAA+TGG - chr1_4:47103989-47104008 None:intergenic 35.0%
TTAAGACCAATGTGGGTTTA+TGG + chr1_4:47103989-47104008 Msa0166110:CDS 35.0%
ATAGAACCATAAACCCACAT+TGG - chr1_4:47103998-47104017 None:intergenic 35.0%
! TGTGGGTTTATGGTTCTATT+TGG + chr1_4:47103999-47104018 Msa0166110:CDS 35.0%
! GTGGGTTTATGGTTCTATTT+GGG + chr1_4:47104000-47104019 Msa0166110:CDS 35.0%
! TATTTGGGATGCTTCATCAT+GGG + chr1_4:47104015-47104034 Msa0166110:CDS 35.0%
TGTACTTTGCAACAAAAGGT+TGG - chr1_4:47104078-47104097 None:intergenic 35.0%
TGCAAAGTACACAAACTTCA+AGG + chr1_4:47104087-47104106 Msa0166110:CDS 35.0%
! AACAACATTGGTCTATGACT+TGG + chr1_4:47104191-47104210 Msa0166110:CDS 35.0%
! ACAACATTGGTCTATGACTT+GGG + chr1_4:47104192-47104211 Msa0166110:CDS 35.0%
GGCAATAGTTATAAACCATG+TGG - chr1_4:47104228-47104247 None:intergenic 35.0%
ACTATTGCCAAGATCCTAAA+AGG + chr1_4:47104239-47104258 Msa0166110:CDS 35.0%
CTATTGCCAAGATCCTAAAA+GGG + chr1_4:47104240-47104259 Msa0166110:CDS 35.0%
! AACATTCAGGTGTTAGTCTA+TGG - chr1_4:47104267-47104286 None:intergenic 35.0%
ATAGACTAACACCTGAATGT+TGG + chr1_4:47104266-47104285 Msa0166110:CDS 35.0%
TAGACTAACACCTGAATGTT+GGG + chr1_4:47104267-47104286 Msa0166110:CDS 35.0%
AAGATTTAACCCCAACATTC+AGG - chr1_4:47104280-47104299 None:intergenic 35.0%
GCTATTGTTGAGTCTATGGA+AGG + chr1_4:47098663-47098682 Msa0166110:CDS 40.0%
GTCTATGGAAGGTGAGAAAA+TGG + chr1_4:47098674-47098693 Msa0166110:CDS 40.0%
AAAAGAGCAATCCATTGTGC+AGG - chr1_4:47098729-47098748 None:intergenic 40.0%
! TCATCAGCGAAAAGAGGTTT+TGG + chr1_4:47098757-47098776 Msa0166110:intron 40.0%
CAGCTTCTTCAGAAAGCTTA+TGG - chr1_4:47098793-47098812 None:intergenic 40.0%
ATAGTCATATGGCATTGCAC+GGG - chr1_4:47098833-47098852 None:intergenic 40.0%
TTTCAGACTTCGGATTCCAT+GGG - chr1_4:47098875-47098894 None:intergenic 40.0%
! GAAGTCTGAAACTATGTCCA+AGG + chr1_4:47098884-47098903 Msa0166110:CDS 40.0%
! TATCTCGATAACTTTTGGCC+AGG + chr1_4:47098959-47098978 Msa0166110:CDS 40.0%
AAGCAGATTAGAATCAACGC+AGG - chr1_4:47099025-47099044 None:intergenic 40.0%
ATTCATGCCAGCAACATTTC+AGG + chr1_4:47099048-47099067 Msa0166110:intron 40.0%
GAGCTAATTACGGCACATTA+AGG - chr1_4:47099257-47099276 None:intergenic 40.0%
GGGGAATGAACTTTCATATG+TGG - chr1_4:47099316-47099335 None:intergenic 40.0%
!! AGACTCTTTTATTTGACCCC+AGG + chr1_4:47099565-47099584 Msa0166110:CDS 40.0%
GAATTTATGCTCAGCCATGT+TGG + chr1_4:47099745-47099764 Msa0166110:CDS 40.0%
TGATCCTGTTAGCACATCAT+TGG - chr1_4:47100044-47100063 None:intergenic 40.0%
GGATCAGACATAATAGCATC+AGG + chr1_4:47100058-47100077 Msa0166110:intron 40.0%
!! AGCCTTTCTAAAGTCATTGC+CGG + chr1_4:47100102-47100121 Msa0166110:CDS 40.0%
! AACCGGCAATGACTTTAGAA+AGG - chr1_4:47100107-47100126 None:intergenic 40.0%
TTGTGAGGAAAGTCTATCAG+AGG + chr1_4:47100253-47100272 Msa0166110:CDS 40.0%
TGTGAGGAAAGTCTATCAGA+GGG + chr1_4:47100254-47100273 Msa0166110:CDS 40.0%
!! AGTTGTTCAATGTGATGGGT+AGG - chr1_4:47100291-47100310 None:intergenic 40.0%
CCCATCACATTGAACAACTT+TGG + chr1_4:47100292-47100311 Msa0166110:CDS 40.0%
AAGTTCTGTTAGCCAGAAGT+TGG + chr1_4:47100335-47100354 Msa0166110:CDS 40.0%
! GCCCTCGCACTATTAAATTT+TGG - chr1_4:47100476-47100495 None:intergenic 40.0%
!! CAAAGTACGTTGATGATGAG+TGG + chr1_4:47100808-47100827 Msa0166110:intron 40.0%
!! TCACAGAAGAGTATCATCAC+TGG + chr1_4:47100943-47100962 Msa0166110:intron 40.0%
!! AGAAGAGTATCATCACTGGT+AGG + chr1_4:47100947-47100966 Msa0166110:intron 40.0%
CACTGGTAGGAAAAAACTCT+AGG + chr1_4:47100960-47100979 Msa0166110:CDS 40.0%
! GTAGGAAAAAACTCTAGGGA+TGG + chr1_4:47100965-47100984 Msa0166110:CDS 40.0%
ATTCCACATCCAGTAACTTG+CGG - chr1_4:47101030-47101049 None:intergenic 40.0%
TTTGAACTTTAGCACCCACA+AGG + chr1_4:47101359-47101378 Msa0166110:intron 40.0%
CACTTCTGATATGCAATCAC+AGG + chr1_4:47101972-47101991 Msa0166110:intron 40.0%
ATCACAGGAGTGACATTGAT+TGG + chr1_4:47101987-47102006 Msa0166110:intron 40.0%
GTTTAGAGAAACATACAGGG+AGG - chr1_4:47102244-47102263 None:intergenic 40.0%
!! AGGTTATAGGTTGGTCAATG+TGG + chr1_4:47102359-47102378 Msa0166110:intron 40.0%
CTTATTCCAGGTTTCATCCA+CGG + chr1_4:47102592-47102611 Msa0166110:intron 40.0%
TTATTCCAGGTTTCATCCAC+GGG + chr1_4:47102593-47102612 Msa0166110:intron 40.0%
ACTTGAATCCGTAAGGATCA+TGG + chr1_4:47102790-47102809 Msa0166110:intron 40.0%
!! GATTTTCAAGCTTCAAGCCA+AGG - chr1_4:47102873-47102892 None:intergenic 40.0%
! GCAAAATGTCCACTGACTAA+AGG - chr1_4:47102922-47102941 None:intergenic 40.0%
! TAGTGGATGATATGCCCATA+AGG + chr1_4:47103933-47103952 Msa0166110:CDS 40.0%
TTCCTTGGATACCTCCTTAT+GGG - chr1_4:47103950-47103969 None:intergenic 40.0%
AATGTTGCATCACTCTTCCT+TGG - chr1_4:47103965-47103984 None:intergenic 40.0%
! CTATTTGGGATGCTTCATCA+TGG + chr1_4:47104014-47104033 Msa0166110:CDS 40.0%
TACACAAACTTCAAGGCTAG+TGG + chr1_4:47104094-47104113 Msa0166110:CDS 40.0%
GGTTGACAAGACAACAACAT+TGG + chr1_4:47104179-47104198 Msa0166110:CDS 40.0%
!!! TATGGTCCCTTTTAGGATCT+TGG - chr1_4:47104249-47104268 None:intergenic 40.0%
!! GTTAGTCTATGGTCCCTTTT+AGG - chr1_4:47104256-47104275 None:intergenic 40.0%
AGACTAACACCTGAATGTTG+GGG + chr1_4:47104268-47104287 Msa0166110:CDS 40.0%
! TATAGGATAGTGGTGACCCA+TGG + chr1_4:47098856-47098875 Msa0166110:intron 45.0%
GTTTCAGACTTCGGATTCCA+TGG - chr1_4:47098876-47098895 None:intergenic 45.0%
! ATGCTGCTTCTATGCTCTTG+AGG + chr1_4:47099389-47099408 Msa0166110:intron 45.0%
CTTCTATGCTCTTGAGGTCA+CGG + chr1_4:47099395-47099414 Msa0166110:intron 45.0%
TTCTATGCTCTTGAGGTCAC+GGG + chr1_4:47099396-47099415 Msa0166110:intron 45.0%
GGTTGGAAAGCTTTCGAAGT+TGG + chr1_4:47099417-47099436 Msa0166110:intron 45.0%
!! CTCTTTTATTTGACCCCAGG+AGG + chr1_4:47099568-47099587 Msa0166110:CDS 45.0%
CATTGTCTGCATGTACCACA+AGG - chr1_4:47099598-47099617 None:intergenic 45.0%
TAATGATAAGAAGGGGGCAG+AGG + chr1_4:47099695-47099714 Msa0166110:CDS 45.0%
AATGATAAGAAGGGGGCAGA+GGG + chr1_4:47099696-47099715 Msa0166110:CDS 45.0%
! GAATCTCACCTAAGTGGGTT+CGG + chr1_4:47099850-47099869 Msa0166110:intron 45.0%
CTATGTACTCCATCCACACA+GGG - chr1_4:47100084-47100103 None:intergenic 45.0%
CACATCAGATGACTGTTGTG+AGG + chr1_4:47100238-47100257 Msa0166110:CDS 45.0%
!! TAAGGTGTTTTGCAGGCTAG+AGG + chr1_4:47100431-47100450 Msa0166110:intron 45.0%
!! AAGGTGTTTTGCAGGCTAGA+GGG + chr1_4:47100432-47100451 Msa0166110:intron 45.0%
!!! TTTGCCTTTTGGGATCCAGT+TGG - chr1_4:47100560-47100579 None:intergenic 45.0%
!! GTTGATGATGAGTGGTGAAG+AGG + chr1_4:47100816-47100835 Msa0166110:intron 45.0%
CTGTGATCCATCACCATACA+TGG - chr1_4:47100929-47100948 None:intergenic 45.0%
!! GTGTTGATGATCGTGACTTG+CGG - chr1_4:47101008-47101027 None:intergenic 45.0%
TCATCAACACCGCAAGTTAC+TGG + chr1_4:47101018-47101037 Msa0166110:CDS 45.0%
CGTTTCCACAAACACCTTGT+GGG - chr1_4:47101376-47101395 None:intergenic 45.0%
ACGTTTCCACAAACACCTTG+TGG - chr1_4:47101377-47101396 None:intergenic 45.0%
TTGGCTTATTGGATGGGTCT+TGG + chr1_4:47102006-47102025 Msa0166110:CDS 45.0%
TTCCTTGAGTTCCTCTTGTG+AGG - chr1_4:47102645-47102664 None:intergenic 45.0%
GGCAAGCCATAAACAAACTC+AGG - chr1_4:47102675-47102694 None:intergenic 45.0%
!!! CGGGGTGGATTGCTTTTTTT+CGG - chr1_4:47103255-47103274 None:intergenic 45.0%
TGGATGATATGCCCATAAGG+AGG + chr1_4:47103936-47103955 Msa0166110:CDS 45.0%
CTTCCTTGGATACCTCCTTA+TGG - chr1_4:47103951-47103970 None:intergenic 45.0%
TCATCATGGGCAACAGAAGA+TGG + chr1_4:47104028-47104047 Msa0166110:CDS 45.0%
TTGTTGTCTTGTCAACCCAC+CGG - chr1_4:47104176-47104195 None:intergenic 45.0%
TTGGGTTCAAAGACACCACA+TGG + chr1_4:47104210-47104229 Msa0166110:CDS 45.0%
!! TATATCAAAAAATATTTATT+TGG + chr1_4:47099452-47099471 Msa0166110:intron 5.0%
!!! TTATTTTTTTAATTTTTCAT+GGG + chr1_4:47104372-47104391 Msa0166110:three_prime_UTR 5.0%
ATGCTGCTGAACCTGCACAA+TGG + chr1_4:47098715-47098734 Msa0166110:CDS 50.0%
TCATATGGCATTGCACGGGA+TGG - chr1_4:47098829-47098848 None:intergenic 50.0%
TAGGACGCCTGAAATGTTGC+TGG - chr1_4:47099058-47099077 None:intergenic 50.0%
TCACATGACCGAACCCACTT+AGG - chr1_4:47099861-47099880 None:intergenic 50.0%
TAATAGCATCAGGCCCTGTG+TGG + chr1_4:47100068-47100087 Msa0166110:CDS 50.0%
GCTATGTACTCCATCCACAC+AGG - chr1_4:47100085-47100104 None:intergenic 50.0%
CGAGGGCAGTATACAGAGAA+CGG + chr1_4:47100489-47100508 Msa0166110:CDS 50.0%
!! ATGCTTGCTGTACCACCAAC+TGG + chr1_4:47100542-47100561 Msa0166110:CDS 50.0%
ACCACCAACTGGATCCCAAA+AGG + chr1_4:47100553-47100572 Msa0166110:CDS 50.0%
ACACCGCAAGTTACTGGATG+TGG + chr1_4:47101024-47101043 Msa0166110:CDS 50.0%
! TAGCACCCACAAGGTGTTTG+TGG + chr1_4:47101368-47101387 Msa0166110:intron 50.0%
TATTGGATGGGTCTTGGCTC+AGG + chr1_4:47102012-47102031 Msa0166110:CDS 50.0%
! TTTTCGTTGGTCACAGCGCA+CGG + chr1_4:47102172-47102191 Msa0166110:intron 50.0%
TAATGGCCATCGTGCTACCA+AGG - chr1_4:47102202-47102221 None:intergenic 50.0%
GGAGATCAAAGCCTCACAAG+AGG + chr1_4:47102631-47102650 Msa0166110:intron 50.0%
AGCCTCACAAGAGGAACTCA+AGG + chr1_4:47102640-47102659 Msa0166110:intron 50.0%
ATACAAACCCGTGCTTCGCA+CGG - chr1_4:47103275-47103294 None:intergenic 50.0%
!! TGCCCATAAGGAGGTATCCA+AGG + chr1_4:47103945-47103964 Msa0166110:CDS 50.0%
!! TGATACAGCAGGTGCTGCTC+AGG + chr1_4:47099168-47099187 Msa0166110:CDS 55.0%
ATGCTCTTGAGGTCACGGGT+TGG + chr1_4:47099400-47099419 Msa0166110:intron 55.0%
TACCACAAGGCAGACCTCCT+GGG - chr1_4:47099585-47099604 None:intergenic 55.0%
!!! GCCTTTTGGGATCCAGTTGG+TGG - chr1_4:47100557-47100576 None:intergenic 55.0%
TTTCGTTGGTCACAGCGCAC+GGG + chr1_4:47102173-47102192 Msa0166110:intron 55.0%
AAGAGCCCGTGGATGAAACC+TGG - chr1_4:47102601-47102620 None:intergenic 55.0%
CACTTCTTGTGAAGAGCCCG+TGG - chr1_4:47102612-47102631 None:intergenic 55.0%
CACGGGCTCTTCACAAGAAG+TGG + chr1_4:47102610-47102629 Msa0166110:intron 55.0%
TACAAACCCGTGCTTCGCAC+GGG - chr1_4:47103274-47103293 None:intergenic 55.0%
ACCACAAGGCAGACCTCCTG+GGG - chr1_4:47099584-47099603 None:intergenic 60.0%
GTACCACAAGGCAGACCTCC+TGG - chr1_4:47099586-47099605 None:intergenic 60.0%
AGCATCAGGCCCTGTGTGGA+TGG + chr1_4:47100072-47100091 Msa0166110:CDS 60.0%
GGATGGGTCTTGGCTCAGGT+AGG + chr1_4:47102016-47102035 Msa0166110:intron 60.0%
! GGGTTGCCTTGGTAGCACGA+TGG + chr1_4:47102193-47102212 Msa0166110:CDS 60.0%
AATCCACCCCGTGCGAAGCA+CGG + chr1_4:47103264-47103283 Msa0166110:intron 60.0%
ACAAACCCGTGCTTCGCACG+GGG - chr1_4:47103273-47103292 None:intergenic 60.0%
ACGACACCAACGCGACGCAT+AGG - chr1_4:47104128-47104147 None:intergenic 60.0%
GTCAACCCACCGGACCGATA+CGG - chr1_4:47104166-47104185 None:intergenic 60.0%
ACCCCAGGAGGTCTGCCTTG+TGG + chr1_4:47099580-47099599 Msa0166110:CDS 65.0%
! TCACAGCGCACGGGTTGCCT+TGG + chr1_4:47102182-47102201 Msa0166110:intron 65.0%
ATCCACCCCGTGCGAAGCAC+GGG + chr1_4:47103265-47103284 Msa0166110:intron 65.0%
GCACAGCCTATGCGTCGCGT+TGG + chr1_4:47104119-47104138 Msa0166110:CDS 65.0%
!! TGCGTCGCGTTGGTGTCGTC+CGG + chr1_4:47104129-47104148 Msa0166110:CDS 65.0%
AACCCGTGCTTCGCACGGGG+TGG - chr1_4:47103270-47103289 None:intergenic 70.0%
!! GCGTTGGTGTCGTCCGGCCA+CGG + chr1_4:47104135-47104154 Msa0166110:CDS 70.0%
! ACGGCCTCGCCGTATCGGTC+CGG + chr1_4:47104154-47104173 Msa0166110:CDS 70.0%
! CCTCGCCGTATCGGTCCGGT+GGG + chr1_4:47104158-47104177 Msa0166110:CDS 70.0%
CGATACGGCGAGGCCGTGGC+CGG - chr1_4:47104151-47104170 None:intergenic 75.0%
CGGCCACGGCCTCGCCGTAT+CGG + chr1_4:47104149-47104168 Msa0166110:CDS 75.0%
GGACCGATACGGCGAGGCCG+TGG - chr1_4:47104155-47104174 None:intergenic 75.0%
! GCCTCGCCGTATCGGTCCGG+TGG + chr1_4:47104157-47104176 Msa0166110:CDS 75.0%
CCCACCGGACCGATACGGCG+AGG - chr1_4:47104161-47104180 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 47098579 47104466 47098579 ID=Msa0166110;Name=Msa0166110
chr1_4 mRNA 47098579 47104466 47098579 ID=Msa0166110-mRNA-1;Parent=Msa0166110;Name=Msa0166110-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.38|0.35|1|0.69|0.78|14|172|542
chr1_4 exon 47098579 47098752 47098579 ID=Msa0166110-mRNA-1:exon:13634;Parent=Msa0166110-mRNA-1
chr1_4 exon 47098861 47098980 47098861 ID=Msa0166110-mRNA-1:exon:13635;Parent=Msa0166110-mRNA-1
chr1_4 exon 47099070 47099189 47099070 ID=Msa0166110-mRNA-1:exon:13636;Parent=Msa0166110-mRNA-1
chr1_4 exon 47099514 47099601 47099514 ID=Msa0166110-mRNA-1:exon:13637;Parent=Msa0166110-mRNA-1
chr1_4 exon 47099665 47099766 47099665 ID=Msa0166110-mRNA-1:exon:13638;Parent=Msa0166110-mRNA-1
chr1_4 exon 47100059 47100123 47100059 ID=Msa0166110-mRNA-1:exon:13639;Parent=Msa0166110-mRNA-1
chr1_4 exon 47100216 47100356 47100216 ID=Msa0166110-mRNA-1:exon:13640;Parent=Msa0166110-mRNA-1
chr1_4 exon 47100446 47100618 47100446 ID=Msa0166110-mRNA-1:exon:13641;Parent=Msa0166110-mRNA-1
chr1_4 exon 47100949 47101113 47100949 ID=Msa0166110-mRNA-1:exon:13642;Parent=Msa0166110-mRNA-1
chr1_4 exon 47101994 47102033 47101994 ID=Msa0166110-mRNA-1:exon:13643;Parent=Msa0166110-mRNA-1
chr1_4 exon 47102188 47102247 47102188 ID=Msa0166110-mRNA-1:exon:13644;Parent=Msa0166110-mRNA-1
chr1_4 exon 47102361 47102367 47102361 ID=Msa0166110-mRNA-1:exon:13645;Parent=Msa0166110-mRNA-1
chr1_4 exon 47102573 47102579 47102573 ID=Msa0166110-mRNA-1:exon:13646;Parent=Msa0166110-mRNA-1
chr1_4 exon 47103928 47104466 47103928 ID=Msa0166110-mRNA-1:exon:13647;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47098579 47098752 47098579 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47098861 47098980 47098861 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47099070 47099189 47099070 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47099514 47099601 47099514 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47099665 47099766 47099665 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47100059 47100123 47100059 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47100216 47100356 47100216 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47100446 47100618 47100446 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47100949 47101113 47100949 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47101994 47102033 47101994 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47102188 47102247 47102188 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47102361 47102367 47102361 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47102573 47102579 47102573 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 CDS 47103928 47104294 47103928 ID=Msa0166110-mRNA-1:cds;Parent=Msa0166110-mRNA-1
chr1_4 three_prime_UTR 47104295 47104466 47104295 ID=Msa0166110-mRNA-1:three_prime_utr;Parent=Msa0166110-mRNA-1
Gene Sequence

>Msa0166110

ATGCTTTCTGAAGAAATTATAATTCAGAAGTTTTTCTTTGAACTTTTCCCTTTCTTGAAGGTAGCATATATTTTTACAAATCAAGCTATTGTTGAGTCTATGGAAGGTGAGAAAATGGTTCATATAATTGATCTTAATGCTGCTGAACCTGCACAATGGATTGCTCTTTTACAAGATAGTGGTGACCCATGGAATCCGAAGTCTGAAACTATGTCCAAGGTCATGTCTACATTGAAAGGTGTTCATAGGGTTTTGAAAGCAAATGGCGCATTTATCTCGATAACTTTTGGCCAGGCGTCCTATAGCTTTGATTTCAAATCCTTTTTTCATGCAGTACTTGATTTAAGCGATACTTTCCTGAATAAATTAGGTGTTGGCAGAGAAAATGTTGATGATACAGCAGGTGCTGCTCAGATCTTTTTCATTATAATATATTCTCTTGGTTATGGAAAGTATCTTCATAGAAGACTCTTTTATTTGACCCCAGGAGGTCTGCCTTGTGGCGGTGTTACATTCGTTTCATTAGAAAGGTTAATGATAAGAAGGGGGCAGAGGGTTAAGAAAAGACAAAAAAAAAATTTTGAATTTATGCTCAGCCATGTTGGATCAGACATAATAGCATCAGGCCCTGTGTGGATGGAGTACATAGCCTTTCTAAAGTCATTGCCGGCTGCACATCCACAAGAAGAAACACATCAGATGACTGTTGTGAGGAAAGTCTATCAGAGGGCTATTATTACTCCTACCCATCACATTGAACAACTTTGGAAAGACTATGATAGTTTTGAAAGTTCTGTTAGCCAGAAGTTGGCTAGAGGGCTTATATCCGAATATCAACCAAAATTTAATAGTGCGAGGGCAGTATACAGAGAACGGAAGAAGTTTTTTGATGAAATTGATTGGAATATGCTTGCTGTACCACCAACTGGATCCCAAAAGGCAAATTTCTGTTCCTCTGCAAATGTTACTAATGTTGTGATCTTAAGAGTATCATCACTGGTAGGAAAAAACTCTAGGGATGGAGTCACGATCATCAACACCGCAAGTCACGATCATCAACACCGCAAGTTACTGGATGTGGAATTTTGCCATTGCTTTTATTCATCTTTTCAGATAGAAACTGAGTTTGTTGAAGTTTTAGCATTCAGGAGTGACATTGATTGGCTTATTGGATGGGTCTTGGCTCAGCGCACGGGTTGCCTTGGTAGCACGATGGCCATTATGAAGAAAGAATTTAAATACCTCCCTGTTATAGTGGCATTATTCTTAGTGGATGATATGCCCATAAGGAGGTATCCAAGGAAGAGTGATGCAACATTTCCATTAAGACCAATGTGGGTTTATGGTTCTATTTGGGATGCTTCATCATGGGCAACAGAAGATGGAAAATACAAAGCTGATTACAAGTACCAACCTTTTGTTGCAAAGTACACAAACTTCAAGGCTAGTGGTTGCACAGCCTATGCGTCGCGTTGGTGTCGTCCGGCCACGGCCTCGCCGTATCGGTCCGGTGGGTTGACAAGACAACAACATTGGTCTATGACTTGGGTTCAAAGACACCACATGGTTTATAACTATTGCCAAGATCCTAAAAGGGACCATAGACTAACACCTGAATGTTGGGGTTAA
Protein sequence

>Msa0166110

MLSEEIIIQKFFFELFPFLKVAYIFTNQAIVESMEGEKMVHIIDLNAAEPAQWIALLQDSGDPWNPKSETMSKVMSTLKGVHRVLKANGAFISITFGQASYSFDFKSFFHAVLDLSDTFLNKLGVGRENVDDTAGAAQIFFIIIYSLGYGKYLHRRLFYLTPGGLPCGGVTFVSLERLMIRRGQRVKKRQKKNFEFMLSHVGSDIIASGPVWMEYIAFLKSLPAAHPQEETHQMTVVRKVYQRAIITPTHHIEQLWKDYDSFESSVSQKLARGLISEYQPKFNSARAVYRERKKFFDEIDWNMLAVPPTGSQKANFCSSANVTNVVILRVSSLVGKNSRDGVTIINTASHDHQHRKLLDVEFCHCFYSSFQIETEFVEVLAFRSDIDWLIGWVLAQRTGCLGSTMAIMKKEFKYLPVIVALFLVDDMPIRRYPRKSDATFPLRPMWVYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCTAYASRWCRPATASPYRSGGLTRQQHWSMTWVQRHHMVYNYCQDPKRDHRLTPECWG*