AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0166160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166160 MtrunA17_Chr1g0180391 93.578 218 14 0 1 218 14 231 4.40e-153 424
Msa0166160 MtrunA17_Chr2g0327821 50.331 151 72 1 1 148 1 151 3.78e-49 160
Msa0166160 MtrunA17_Chr7g0228231 60.000 110 44 0 2 111 10 119 6.35e-44 146
Msa0166160 MtrunA17_Chr4g0030881 60.000 110 37 1 7 109 8 117 3.26e-43 145
Msa0166160 MtrunA17_Chr4g0022931 62.385 109 41 0 6 114 13 121 4.21e-43 145
Msa0166160 MtrunA17_Chr6g0450101 59.091 110 45 0 2 111 10 119 6.33e-43 143
Msa0166160 MtrunA17_Chr1g0209661 61.321 106 41 0 6 111 27 132 6.35e-43 146
Msa0166160 MtrunA17_Chr1g0186061 63.107 103 38 0 7 109 21 123 9.41e-43 144
Msa0166160 MtrunA17_Chr1g0168661 59.459 111 45 0 1 111 16 126 1.82e-42 144
Msa0166160 MtrunA17_Chr4g0022901 61.905 105 40 0 6 110 13 117 1.81e-41 142
Msa0166160 MtrunA17_Chr4g0022911 49.640 139 57 2 6 141 13 141 3.54e-41 141
Msa0166160 MtrunA17_Chr4g0022881 51.562 128 62 0 7 134 13 140 4.72e-41 139
Msa0166160 MtrunA17_Chr7g0274581 60.377 106 42 0 6 111 12 117 1.19e-40 137
Msa0166160 MtrunA17_Chr2g0328771 57.547 106 45 0 6 111 20 125 1.25e-40 140
Msa0166160 MtrunA17_Chr5g0410961 60.000 105 42 0 6 110 12 116 1.26e-40 141
Msa0166160 MtrunA17_Chr1g0203411 56.757 111 48 0 6 116 12 122 1.36e-40 140
Msa0166160 MtrunA17_Chr1g0194291 60.377 106 42 0 6 111 21 126 1.44e-40 139
Msa0166160 MtrunA17_Chr8g0385321 61.165 103 40 0 8 110 14 116 2.44e-40 140
Msa0166160 MtrunA17_Chr2g0323351 54.762 126 56 1 6 131 12 136 2.58e-40 138
Msa0166160 MtrunA17_Chr8g0349261 59.434 106 42 1 6 110 13 118 4.44e-40 139
Msa0166160 MtrunA17_Chr3g0131121 59.813 107 43 0 4 110 10 116 5.10e-40 139
Msa0166160 MtrunA17_Chr2g0281071 60.000 105 42 0 6 110 13 117 6.47e-40 139
Msa0166160 MtrunA17_Chr1g0194301 55.660 106 47 0 6 111 33 138 6.54e-40 138
Msa0166160 MtrunA17_Chr1g0211161 54.545 110 50 0 4 113 11 120 7.00e-40 136
Msa0166160 MtrunA17_Chr4g0057031 50.794 126 56 2 6 131 12 131 7.38e-40 137
Msa0166160 MtrunA17_Chr4g0037141 62.136 103 39 0 8 110 14 116 8.09e-40 137
Msa0166160 MtrunA17_Chr3g0117091 55.455 110 49 0 4 113 10 119 8.79e-40 139
Msa0166160 MtrunA17_Chr2g0323411 51.145 131 64 0 6 136 12 142 1.07e-39 138
Msa0166160 MtrunA17_Chr4g0048511 60.000 105 42 0 6 110 13 117 1.28e-39 139
Msa0166160 MtrunA17_Chr3g0115821 57.273 110 46 1 6 115 12 120 1.32e-39 139
Msa0166160 MtrunA17_Chr1g0193371 57.407 108 46 0 4 111 10 117 1.46e-39 139
Msa0166160 MtrunA17_Chr1g0193801 53.333 135 56 2 4 132 10 143 1.83e-39 139
Msa0166160 MtrunA17_Chr3g0088461 57.547 106 45 0 6 111 22 127 3.14e-39 137
Msa0166160 MtrunA17_Chr4g0032401 56.604 106 46 0 6 111 17 122 3.32e-39 137
Msa0166160 MtrunA17_Chr7g0261281 57.658 111 47 0 6 116 12 122 4.39e-39 135
Msa0166160 MtrunA17_Chr7g0217741 59.048 105 43 0 6 110 12 116 5.55e-39 136
Msa0166160 MtrunA17_Chr5g0395281 44.231 156 79 3 6 159 12 161 6.09e-39 136
Msa0166160 MtrunA17_Chr1g0167691 57.143 105 45 0 6 110 12 116 6.25e-39 134
Msa0166160 MtrunA17_Chr7g0270891 53.543 127 52 2 4 124 10 135 6.30e-39 137
Msa0166160 MtrunA17_Chr5g0435101 55.140 107 48 0 4 110 9 115 6.46e-39 133
Msa0166160 MtrunA17_Chr4g0058631 56.250 112 48 1 4 115 10 120 6.63e-39 137
Msa0166160 MtrunA17_Chr4g0044421 40.110 182 96 4 8 188 14 183 1.00e-38 132
Msa0166160 MtrunA17_Chr2g0309911 50.000 112 55 1 4 115 9 119 1.57e-38 135
Msa0166160 MtrunA17_Chr3g0099131 56.303 119 50 1 5 123 40 156 1.70e-38 139
Msa0166160 MtrunA17_Chr1g0167661 57.143 105 45 0 6 110 12 116 2.85e-38 133
Msa0166160 MtrunA17_Chr1g0187761 54.955 111 50 0 6 116 12 122 3.22e-38 133
Msa0166160 MtrunA17_Chr4g0055981 42.697 178 91 4 4 175 53 225 4.08e-38 132
Msa0166160 MtrunA17_Chr3g0110351 55.660 106 47 0 6 111 12 117 5.43e-38 134
Msa0166160 MtrunA17_Chr4g0070641 48.322 149 73 2 4 148 10 158 6.23e-38 129
Msa0166160 MtrunA17_Chr4g0022891 56.863 102 44 0 6 107 12 113 6.99e-38 131
Msa0166160 MtrunA17_Chr4g0039971 56.364 110 47 1 6 115 13 121 1.25e-37 134
Msa0166160 MtrunA17_Chr8g0346561 58.716 109 45 0 6 114 12 120 1.26e-37 132
Msa0166160 MtrunA17_Chr8g0342541 52.336 107 51 0 4 110 10 116 1.54e-37 133
Msa0166160 MtrunA17_Chr3g0121241 57.273 110 46 1 6 115 42 150 1.66e-37 132
Msa0166160 MtrunA17_Chr4g0042671 56.190 105 46 0 6 110 12 116 1.67e-37 134
Msa0166160 MtrunA17_Chr2g0311221 60.000 100 40 0 6 105 14 113 1.68e-37 133
Msa0166160 MtrunA17_Chr5g0434571 55.660 106 47 0 6 111 48 153 2.11e-37 133
Msa0166160 MtrunA17_Chr2g0330041 51.402 107 52 0 4 110 10 116 3.44e-37 134
Msa0166160 MtrunA17_Chr4g0070611 56.757 111 48 0 4 114 10 120 4.88e-37 131
Msa0166160 MtrunA17_Chr8g0342521 53.271 107 50 0 4 110 10 116 5.64e-37 132
Msa0166160 MtrunA17_Chr1g0203441 57.692 104 44 0 7 110 14 117 7.71e-37 129
Msa0166160 MtrunA17_Chr3g0103281 54.206 107 49 0 4 110 10 116 1.57e-36 130
Msa0166160 MtrunA17_Chr8g0354661 48.148 135 68 1 2 136 33 165 1.98e-36 134
Msa0166160 MtrunA17_Chr2g0293911 58.879 107 44 0 5 111 23 129 2.39e-36 130
Msa0166160 MtrunA17_Chr8g0343831 54.630 108 49 0 6 113 8 115 3.61e-36 127
Msa0166160 MtrunA17_Chr7g0271241 59.794 97 39 0 6 102 12 108 3.83e-36 130
Msa0166160 MtrunA17_Chr8g0334881 56.481 108 45 2 4 110 8 114 4.45e-36 129
Msa0166160 MtrunA17_Chr6g0453471 54.286 105 48 0 6 110 12 116 5.06e-36 129
Msa0166160 MtrunA17_Chr1g0151941 52.778 108 50 1 4 110 10 117 5.32e-36 127
Msa0166160 MtrunA17_Chr6g0452271 52.830 106 50 0 5 110 11 116 5.84e-36 129
Msa0166160 MtrunA17_Chr6g0470971 54.128 109 50 0 1 109 9 117 6.11e-36 127
Msa0166160 MtrunA17_Chr4g0068921 59.615 104 42 0 5 108 23 126 6.49e-36 125
Msa0166160 MtrunA17_Chr7g0275911 55.046 109 49 0 6 114 12 120 6.82e-36 127
Msa0166160 MtrunA17_Chr1g0154031 42.405 158 84 3 6 159 76 230 9.99e-36 130
Msa0166160 MtrunA17_Chr3g0080861 49.580 119 60 0 3 121 34 152 1.18e-35 131
Msa0166160 MtrunA17_Chr8g0342481 52.778 108 50 1 4 110 10 117 1.58e-35 129
Msa0166160 MtrunA17_Chr3g0092401 52.830 106 50 0 6 111 13 118 2.56e-35 127
Msa0166160 MtrunA17_Chr4g0028311 53.153 111 51 1 5 114 11 121 3.72e-35 126
Msa0166160 MtrunA17_Chr8g0387421 50.000 108 54 0 4 111 10 117 6.67e-35 125
Msa0166160 MtrunA17_Chr7g0217221 49.550 111 56 0 4 114 10 120 7.55e-35 124
Msa0166160 MtrunA17_Chr5g0417821 54.286 105 48 0 6 110 7 111 1.93e-34 124
Msa0166160 MtrunA17_Chr2g0327351 58.416 101 41 1 5 104 11 111 1.94e-34 124
Msa0166160 MtrunA17_Chr7g0228891 52.830 106 50 0 6 111 12 117 2.31e-34 123
Msa0166160 MtrunA17_Chr1g0152011 55.140 107 47 1 5 110 11 117 3.68e-34 124
Msa0166160 MtrunA17_Chr1g0194951 55.238 105 47 0 6 110 12 116 4.36e-34 125
Msa0166160 MtrunA17_Chr4g0068061 55.238 105 47 0 6 110 12 116 4.42e-34 124
Msa0166160 MtrunA17_Chr5g0400821 53.153 111 51 1 5 114 11 121 4.85e-34 123
Msa0166160 MtrunA17_Chr4g0060721 51.376 109 53 0 6 114 13 121 5.06e-34 124
Msa0166160 MtrunA17_Chr3g0135311 54.206 107 48 1 5 110 11 117 1.11e-33 123
Msa0166160 MtrunA17_Chr7g0254411 52.381 105 50 0 6 110 12 116 1.60e-33 122
Msa0166160 MtrunA17_Chr5g0397231 53.465 101 47 0 4 104 10 110 2.37e-33 122
Msa0166160 MtrunA17_Chr7g0264641 51.402 107 51 1 5 110 11 117 2.97e-33 120
Msa0166160 MtrunA17_Chr5g0441131 47.059 119 62 1 5 122 8 126 2.05e-32 115
Msa0166160 MtrunA17_Chr4g0054391 55.556 99 43 1 5 102 11 109 6.39e-32 117
Msa0166160 MtrunA17_Chr7g0240821 50.467 107 53 0 10 116 5 111 6.62e-32 115
Msa0166160 MtrunA17_Chr6g0453211 50.980 102 50 0 4 105 10 111 1.02e-31 117
Msa0166160 MtrunA17_Chr4g0013361 53.271 107 48 2 6 111 10 115 1.03e-31 117
Msa0166160 MtrunA17_Chr7g0247131 62.667 75 28 0 37 111 9 83 3.47e-31 115
Msa0166160 MtrunA17_Chr4g0072751 55.446 101 44 1 5 104 11 111 3.55e-31 117
Msa0166160 MtrunA17_Chr5g0440781 36.364 176 101 2 5 179 11 176 3.56e-31 112
Msa0166160 MtrunA17_Chr7g0269831 52.941 119 56 0 6 124 12 130 3.98e-31 116
Msa0166160 MtrunA17_Chr5g0434931 50.476 105 52 0 6 110 35 139 3.99e-31 115
Msa0166160 MtrunA17_Chr5g0440761 36.364 176 101 2 5 179 11 176 1.65e-30 113
Msa0166160 MtrunA17_Chr7g0228991 51.429 105 51 0 6 110 29 133 1.77e-30 113
Msa0166160 MtrunA17_Chr5g0441141 36.782 174 99 2 7 179 13 176 1.77e-30 113
Msa0166160 MtrunA17_Chr7g0220341 47.788 113 57 1 6 116 25 137 3.76e-30 112
Msa0166160 MtrunA17_Chr2g0322521 46.825 126 67 0 6 131 29 154 3.83e-30 115
Msa0166160 MtrunA17_Chr8g0360111 52.475 101 48 0 6 106 25 125 3.91e-30 112
Msa0166160 MtrunA17_Chr5g0434911 49.524 105 53 0 6 110 21 125 5.10e-30 112
Msa0166160 MtrunA17_Chr5g0434841 49.541 109 55 0 2 110 16 124 1.69e-29 111
Msa0166160 MtrunA17_Chr5g0434831 50.476 105 52 0 6 110 7 111 2.24e-29 108
Msa0166160 MtrunA17_Chr4g0008551 53.398 103 45 2 8 109 38 138 2.99e-29 111
Msa0166160 MtrunA17_Chr1g0192411 47.541 122 62 1 6 127 12 131 8.07e-29 111
Msa0166160 MtrunA17_Chr4g0053431 51.456 103 49 1 8 110 5 106 1.87e-28 108
Msa0166160 MtrunA17_Chr3g0099141 56.627 83 36 0 5 87 39 121 8.75e-28 102
Msa0166160 MtrunA17_Chr6g0487491 47.788 113 50 2 6 109 12 124 2.21e-27 105
Msa0166160 MtrunA17_Chr3g0133601 40.625 128 62 3 8 123 37 162 2.96e-27 103
Msa0166160 MtrunA17_Chr2g0323321 55.556 81 36 0 6 86 11 91 2.46e-26 98.2
Msa0166160 MtrunA17_Chr5g0437321 48.000 100 49 2 8 106 19 116 4.15e-26 102
Msa0166160 MtrunA17_Chr5g0401731 48.544 103 50 2 8 109 15 115 5.15e-26 102
Msa0166160 MtrunA17_Chr6g0454921 47.115 104 52 2 8 110 15 116 2.39e-25 98.2
Msa0166160 MtrunA17_Chr5g0429661 47.525 101 50 2 3 102 117 215 1.61e-24 99.0
Msa0166160 MtrunA17_Chr7g0238631 36.986 146 79 3 6 140 111 254 3.14e-24 99.8
Msa0166160 MtrunA17_Chr7g0238631 37.143 105 64 2 8 111 61 164 1.36e-12 66.2
Msa0166160 MtrunA17_Chr5g0397841 40.876 137 71 2 1 128 103 238 1.09e-23 98.2
Msa0166160 MtrunA17_Chr3g0139671 40.566 106 60 2 6 110 83 186 2.63e-23 97.4
Msa0166160 MtrunA17_Chr3g0139671 36.538 104 64 2 8 110 33 135 1.56e-12 66.2
Msa0166160 MtrunA17_Chr8g0342471 50.617 81 39 1 4 83 10 90 2.89e-23 90.9
Msa0166160 MtrunA17_Chr8g0342531 51.250 80 39 0 4 83 10 89 3.54e-23 91.7
Msa0166160 MtrunA17_Chr8g0342511 51.282 78 38 0 4 81 10 87 3.76e-23 89.4
Msa0166160 MtrunA17_Chr8g0342461 50.617 81 39 1 4 83 10 90 4.82e-23 90.5
Msa0166160 MtrunA17_Chr4g0042611 50.649 77 38 0 6 82 12 88 6.59e-23 88.6
Msa0166160 MtrunA17_Chr5g0425591 50.000 84 41 1 5 87 8 91 1.28e-22 87.8
Msa0166160 MtrunA17_Chr6g0480581 44.118 102 54 2 8 108 4 103 1.38e-22 92.0
Msa0166160 MtrunA17_Chr7g0228531 34.759 187 103 7 5 187 217 388 1.90e-22 94.4
Msa0166160 MtrunA17_Chr4g0058991 45.918 98 50 2 6 102 207 302 7.57e-22 92.8
Msa0166160 MtrunA17_Chr3g0117511 39.655 116 67 2 5 119 180 293 7.59e-22 92.8
Msa0166160 MtrunA17_Chr1g0157731 40.566 106 60 2 6 110 89 192 9.15e-22 93.2
Msa0166160 MtrunA17_Chr1g0157731 35.577 104 65 2 8 110 39 141 4.23e-13 67.8
Msa0166160 MtrunA17_Chr5g0395221 51.948 77 37 0 6 82 12 88 1.18e-21 85.1
Msa0166160 MtrunA17_Chr5g0417621 39.316 117 68 2 2 117 128 242 1.59e-21 91.7
Msa0166160 MtrunA17_Chr6g0453751 48.352 91 38 2 6 87 20 110 1.74e-21 86.3
Msa0166160 MtrunA17_Chr4g0042501 40.541 111 63 2 8 117 105 213 3.10e-21 90.9
Msa0166160 MtrunA17_Chr3g0125801 44.860 107 56 2 8 113 16 120 8.90e-21 88.2
Msa0166160 MtrunA17_Chr5g0434901 56.338 71 31 0 37 107 4 74 2.66e-20 82.8
Msa0166160 MtrunA17_Chr7g0229101 54.930 71 32 0 37 107 3 73 3.54e-20 84.7
Msa0166160 MtrunA17_Chr6g0460661 40.625 96 54 2 8 102 16 109 3.64e-20 83.6
Msa0166160 MtrunA17_Chr6g0460671 40.777 103 58 2 8 109 99 199 4.15e-20 87.0
Msa0166160 MtrunA17_Chr7g0229131 48.750 80 41 0 37 116 3 82 1.02e-19 82.8
Msa0166160 MtrunA17_Chr7g0228481 33.158 190 102 6 5 187 217 388 1.12e-19 86.3
Msa0166160 MtrunA17_Chr7g0254261 36.364 154 83 5 8 151 89 237 4.11e-19 84.3
Msa0166160 MtrunA17_Chr7g0238651 35.821 134 72 2 11 142 10 131 6.39e-19 84.0
Msa0166160 MtrunA17_Chr2g0294811 46.914 81 43 0 6 86 12 92 5.54e-18 76.6
Msa0166160 MtrunA17_Chr3g0093811 48.649 74 38 0 37 110 13 86 1.11e-17 79.3
Msa0166160 MtrunA17_Chr7g0233061 37.000 100 60 2 5 104 177 273 5.79e-17 78.2
Msa0166160 MtrunA17_Chr1g0177901 41.860 86 49 1 19 104 5 89 2.34e-16 74.7
Msa0166160 MtrunA17_Chr7g0228401 43.023 86 48 1 19 104 290 374 4.01e-16 76.3
Msa0166160 MtrunA17_Chr5g0416341 33.333 174 95 7 10 182 28 181 1.36e-15 74.7
Msa0166160 MtrunA17_Chr8g0362231 37.000 100 62 1 10 109 24 122 5.38e-14 70.1
Msa0166160 MtrunA17_Chr1g0193901 47.619 84 42 2 6 87 11 94 4.36e-13 63.5
Msa0166160 MtrunA17_Chr1g0193891 47.619 84 42 2 6 87 11 94 4.36e-13 63.5
Msa0166160 MtrunA17_Chr1g0193871 47.619 84 42 2 6 87 11 94 4.36e-13 63.5
Msa0166160 MtrunA17_Chr1g0193881 47.619 84 42 2 6 87 11 94 4.36e-13 63.5
Msa0166160 MtrunA17_Chr5g0434871 55.814 43 19 0 68 110 2 44 6.25e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0166160 AT3G53200.1 52.632 190 69 5 4 175 7 193 1.53e-56 179
Msa0166160 AT3G46130.1 63.063 111 41 0 1 111 4 114 4.58e-47 156
Msa0166160 AT5G59780.3 62.963 108 40 0 4 111 6 113 2.52e-46 153
Msa0166160 AT1G79180.1 53.488 129 60 0 6 134 14 142 1.62e-42 145
Msa0166160 AT3G24310.1 61.111 108 42 0 4 111 16 123 2.40e-42 144
Msa0166160 AT5G40350.1 58.559 111 45 1 6 116 17 126 4.66e-42 142
Msa0166160 AT3G30210.1 65.049 103 36 0 6 108 27 129 4.70e-42 144
Msa0166160 AT4G13480.1 60.360 111 44 0 1 111 1 111 4.71e-42 143
Msa0166160 AT3G27810.1 58.491 106 44 0 6 111 20 125 5.72e-42 142
Msa0166160 AT5G07690.1 54.331 127 57 1 3 129 9 134 1.40e-41 144
Msa0166160 AT5G65230.1 58.182 110 45 1 6 115 12 120 2.30e-41 142
Msa0166160 AT1G16490.1 59.259 108 44 0 6 113 14 121 2.65e-41 142
Msa0166160 AT1G48000.1 57.009 107 46 0 6 112 32 138 2.87e-41 140
Msa0166160 AT5G61420.2 55.118 127 56 1 3 129 9 134 5.51e-41 143
Msa0166160 AT3G01530.1 47.761 134 70 0 6 139 25 158 5.54e-41 139
Msa0166160 AT2G47190.1 57.009 107 46 0 5 111 19 125 5.97e-41 140
Msa0166160 AT3G12820.1 61.905 105 40 0 6 110 14 118 1.23e-40 139
Msa0166160 AT5G26660.1 58.333 108 45 0 4 111 10 117 1.27e-40 142
Msa0166160 AT1G68320.1 57.407 108 46 0 4 111 17 124 1.82e-40 140
Msa0166160 AT1G18570.1 52.713 129 55 2 6 134 13 135 1.86e-40 141
Msa0166160 AT5G07700.1 58.333 108 45 0 3 110 9 116 2.04e-40 141
Msa0166160 AT5G07700.2 58.333 108 45 0 3 110 9 116 2.04e-40 141
Msa0166160 AT1G74080.1 42.935 184 98 3 1 184 7 183 2.31e-40 140
Msa0166160 AT4G38620.1 49.655 145 55 1 8 152 14 140 2.50e-40 139
Msa0166160 AT2G16720.1 57.273 110 47 0 1 110 7 116 2.67e-40 139
Msa0166160 AT1G57560.2 48.611 144 56 1 4 147 10 135 4.27e-40 138
Msa0166160 AT3G61250.1 57.143 105 45 0 6 110 12 116 4.61e-40 139
Msa0166160 AT3G13540.1 59.091 110 44 1 6 115 23 131 5.27e-40 137
Msa0166160 AT4G22680.1 50.370 135 61 2 6 140 12 140 6.64e-40 138
Msa0166160 AT4G34990.1 61.165 103 40 0 8 110 14 116 7.12e-40 138
Msa0166160 AT1G57560.1 57.944 107 45 0 4 110 10 116 7.25e-40 139
Msa0166160 AT4G12350.1 46.939 147 69 2 6 149 12 152 7.62e-40 138
Msa0166160 AT1G25340.1 55.455 110 49 0 2 111 14 123 8.87e-40 138
Msa0166160 AT5G10280.1 56.364 110 47 1 6 115 12 120 9.72e-40 139
Msa0166160 AT4G05100.1 60.000 105 42 0 6 110 13 117 1.83e-39 138
Msa0166160 AT1G09540.1 58.333 108 45 0 4 111 10 117 1.86e-39 139
Msa0166160 AT3G23250.1 42.222 180 102 2 6 184 12 190 2.01e-39 137
Msa0166160 AT1G56160.1 59.048 105 43 0 6 110 14 118 2.35e-39 137
Msa0166160 AT3G01140.2 46.897 145 68 3 6 150 12 147 3.36e-39 138
Msa0166160 AT3G53200.2 50.323 155 56 5 39 175 9 160 4.00e-39 134
Msa0166160 AT1G22640.1 57.547 106 45 0 5 110 11 116 4.61e-39 135
Msa0166160 AT5G16770.4 59.091 110 44 1 6 115 12 120 5.41e-39 137
Msa0166160 AT5G16770.3 59.091 110 44 1 6 115 12 120 5.41e-39 137
Msa0166160 AT5G16770.1 50.758 132 59 2 6 137 12 137 7.08e-39 137
Msa0166160 AT5G16770.2 50.758 132 59 2 6 137 12 137 7.08e-39 137
Msa0166160 AT1G06180.1 56.881 109 47 0 6 114 12 120 7.39e-39 134
Msa0166160 AT3G01140.1 46.897 145 68 3 6 150 55 190 7.72e-39 138
Msa0166160 AT4G28110.1 58.095 105 44 0 6 110 12 116 8.01e-39 135
Msa0166160 AT5G54230.1 56.190 105 46 0 6 110 12 116 8.17e-39 136
Msa0166160 AT3G02940.2 57.273 110 46 1 6 115 12 120 8.18e-39 136
Msa0166160 AT4G01680.3 55.455 110 49 0 4 113 10 119 1.04e-38 134
Msa0166160 AT4G17785.2 56.140 114 49 1 2 115 9 121 1.22e-38 137
Msa0166160 AT1G35515.1 57.547 106 45 0 5 110 11 116 1.26e-38 133
Msa0166160 AT4G21440.1 57.143 105 45 0 6 110 12 116 1.39e-38 136
Msa0166160 AT4G17785.1 56.140 114 49 1 2 115 9 121 1.47e-38 137
Msa0166160 AT3G02940.1 57.273 110 46 1 6 115 12 120 1.48e-38 135
Msa0166160 AT3G02940.3 57.273 110 46 1 6 115 12 120 1.48e-38 135
Msa0166160 AT5G15310.4 46.897 145 68 3 6 150 12 147 1.84e-38 133
Msa0166160 AT4G09460.1 58.252 103 43 0 8 110 14 116 2.07e-38 133
Msa0166160 AT1G34670.1 56.364 110 47 1 6 115 12 120 2.21e-38 136
Msa0166160 AT3G12720.1 51.852 108 52 0 6 113 22 129 2.39e-38 135
Msa0166160 AT2G31180.1 45.455 143 68 1 6 148 12 144 2.46e-38 133
Msa0166160 AT5G14750.1 48.361 122 56 1 7 121 17 138 2.47e-38 132
Msa0166160 AT4G01680.1 55.455 110 49 0 4 113 10 119 3.29e-38 135
Msa0166160 AT5G15310.2 50.794 126 56 2 6 131 12 131 3.35e-38 134
Msa0166160 AT5G15310.1 50.794 126 56 2 6 131 12 131 3.62e-38 135
Msa0166160 AT3G08500.1 58.491 106 44 0 6 111 30 135 3.89e-38 135
Msa0166160 AT2G32460.1 45.926 135 66 1 1 135 13 140 2.29e-37 136
Msa0166160 AT4G26930.1 56.667 120 50 2 3 122 16 133 3.10e-37 134
Msa0166160 AT1G66230.1 54.717 106 48 0 6 111 12 117 4.63e-37 131
Msa0166160 AT5G60890.1 47.222 144 54 2 4 143 10 135 4.89e-37 131
Msa0166160 AT4G25560.1 57.009 107 46 0 3 109 7 113 5.63e-37 130
Msa0166160 AT2G32460.2 45.926 135 66 1 1 135 1 128 6.85e-37 134
Msa0166160 AT5G16600.1 55.660 106 47 0 6 111 12 117 8.10e-37 131
Msa0166160 AT5G12870.1 52.727 110 52 0 2 111 14 123 1.15e-36 130
Msa0166160 AT5G56110.1 55.140 107 48 0 4 110 10 116 1.16e-36 130
Msa0166160 AT5G40330.1 43.262 141 78 1 7 147 13 151 2.00e-36 127
Msa0166160 AT5G52260.1 52.941 119 56 0 7 125 13 131 2.07e-36 129
Msa0166160 AT5G55020.1 53.333 120 54 1 3 122 23 140 3.73e-36 133
Msa0166160 AT3G06490.1 57.944 107 45 0 5 111 18 124 4.46e-36 129
Msa0166160 AT3G13890.2 50.467 107 53 0 4 110 10 116 4.93e-36 130
Msa0166160 AT5G49620.1 58.879 107 44 0 5 111 25 131 5.29e-36 129
Msa0166160 AT5G06100.1 55.140 107 48 0 3 109 29 135 9.27e-36 131
Msa0166160 AT3G48920.1 53.982 113 52 0 4 116 16 128 1.26e-35 126
Msa0166160 AT1G79180.2 42.593 162 60 1 6 134 14 175 1.28e-35 128
Msa0166160 AT5G35550.1 37.019 208 121 5 4 210 12 210 1.35e-35 126
Msa0166160 AT3G27920.1 45.968 124 64 1 7 130 15 135 2.36e-35 125
Msa0166160 AT5G06100.5 55.140 107 48 0 3 109 29 135 2.52e-35 130
Msa0166160 AT5G06100.2 55.140 107 48 0 3 109 29 135 2.52e-35 130
Msa0166160 AT5G06100.3 55.140 107 48 0 3 109 29 135 2.52e-35 130
Msa0166160 AT5G06100.4 55.140 107 48 0 3 109 29 135 2.52e-35 130
Msa0166160 AT4G37780.1 50.833 120 58 1 6 124 12 131 3.31e-35 127
Msa0166160 AT3G11440.2 55.769 104 46 0 6 109 41 144 4.44e-35 129
Msa0166160 AT1G25340.2 53.636 110 46 1 2 111 14 118 5.16e-35 125
Msa0166160 AT1G08810.1 49.167 120 61 0 6 125 12 131 6.98e-35 125
Msa0166160 AT4G01680.2 50.000 122 49 1 4 113 10 131 1.03e-34 126
Msa0166160 AT3G11440.3 55.769 104 46 0 6 109 41 144 1.19e-34 129
Msa0166160 AT3G11440.4 55.769 104 46 0 6 109 41 144 1.19e-34 129
Msa0166160 AT3G11440.1 55.769 104 46 0 6 109 41 144 1.19e-34 129
Msa0166160 AT3G28470.1 53.000 100 47 0 5 104 11 110 1.20e-34 125
Msa0166160 AT3G47600.1 52.830 106 50 0 6 111 12 117 1.23e-34 125
Msa0166160 AT1G25340.3 53.636 110 46 1 2 111 14 118 1.38e-34 125
Msa0166160 AT5G62320.1 53.571 112 45 1 6 110 13 124 1.39e-34 123
Msa0166160 AT1G74650.1 48.800 125 61 1 6 127 12 136 1.43e-34 125
Msa0166160 AT5G49330.1 56.190 105 46 0 6 110 12 116 2.01e-34 125
Msa0166160 AT5G52600.1 53.846 104 48 0 6 109 12 115 2.09e-34 122
Msa0166160 AT5G62470.2 53.774 106 49 0 6 111 12 117 2.18e-34 125
Msa0166160 AT2G47460.1 54.717 106 48 0 6 111 12 117 3.11e-34 125
Msa0166160 AT1G63910.1 50.926 108 53 0 4 111 10 117 3.51e-34 125
Msa0166160 AT3G49690.1 51.695 118 56 1 5 121 11 128 3.55e-34 124
Msa0166160 AT1G74430.1 42.466 146 66 1 4 149 10 137 5.15e-34 122
Msa0166160 AT3G60460.1 54.630 108 47 2 4 110 9 115 5.49e-34 123
Msa0166160 AT3G62610.1 53.774 106 49 0 6 111 12 117 6.57e-34 124
Msa0166160 AT5G57620.1 51.754 114 54 1 5 117 11 124 7.30e-34 124
Msa0166160 AT5G23000.1 54.717 106 47 1 6 110 12 117 7.59e-34 124
Msa0166160 AT5G65790.1 53.153 111 51 1 5 114 11 121 1.71e-33 124
Msa0166160 AT3G13890.1 46.552 116 53 1 4 110 10 125 4.09e-33 122
Msa0166160 AT5G14340.1 52.830 106 50 0 6 111 24 129 5.65e-33 120
Msa0166160 AT3G28910.1 51.429 105 51 0 6 110 12 116 9.81e-33 120
Msa0166160 AT3G46130.3 66.667 75 25 0 37 111 8 82 1.84e-32 117
Msa0166160 AT5G49620.2 52.066 121 44 1 5 111 25 145 2.28e-32 119
Msa0166160 AT5G59780.2 68.493 73 23 0 39 111 20 92 3.28e-32 116
Msa0166160 AT5G62470.1 53.774 106 48 1 6 111 12 116 3.82e-32 119
Msa0166160 AT2G26960.1 50.926 108 52 1 4 111 18 124 4.20e-32 120
Msa0166160 AT3G46130.4 68.493 73 23 0 39 111 20 92 6.22e-32 116
Msa0166160 AT2G36890.1 52.336 107 50 1 5 110 11 117 1.33e-31 117
Msa0166160 AT2G36890.2 52.336 107 50 1 5 110 52 158 2.94e-31 117
Msa0166160 AT1G66370.1 51.923 104 50 0 6 109 8 111 1.42e-30 113
Msa0166160 AT1G18710.1 46.729 107 57 0 4 110 10 116 1.65e-30 113
Msa0166160 AT3G27810.2 63.014 73 27 0 39 111 4 76 2.31e-30 110
Msa0166160 AT5G40350.2 61.538 78 29 1 39 116 5 81 6.89e-30 109
Msa0166160 AT1G66380.1 51.351 111 52 1 1 109 1 111 9.40e-30 108
Msa0166160 AT3G50060.1 51.923 104 47 2 8 110 6 107 9.60e-30 112
Msa0166160 AT3G12820.2 71.014 69 20 0 42 110 2 70 3.48e-29 108
Msa0166160 AT5G14750.3 49.000 100 39 2 34 121 5 104 7.30e-29 106
Msa0166160 AT1G56650.1 50.450 111 53 1 1 109 1 111 1.27e-28 108
Msa0166160 AT2G39880.1 50.000 112 53 2 3 113 45 154 1.37e-28 110
Msa0166160 AT5G35550.2 37.079 178 102 5 34 210 45 213 1.83e-28 108
Msa0166160 AT5G67300.1 50.000 104 49 2 8 110 6 107 2.51e-28 108
Msa0166160 AT2G26950.1 48.485 99 51 0 4 102 14 112 2.75e-28 110
Msa0166160 AT1G66390.1 50.450 111 53 1 1 109 1 111 9.28e-28 105
Msa0166160 AT5G26660.2 63.014 73 27 0 39 111 14 86 1.22e-27 107
Msa0166160 AT3G47600.2 52.128 94 41 1 18 111 22 111 4.88e-27 105
Msa0166160 AT3G55730.1 37.647 170 93 5 8 174 56 215 5.36e-27 106
Msa0166160 AT3G09230.1 50.485 103 48 2 8 109 55 155 1.38e-25 102
Msa0166160 AT5G02320.3 33.673 196 106 7 6 199 65 238 1.95e-25 103
Msa0166160 AT5G02320.3 39.000 100 59 2 8 106 15 113 1.61e-12 66.2
Msa0166160 AT5G02320.1 34.946 186 97 7 6 189 125 288 2.17e-25 103
Msa0166160 AT5G02320.1 39.000 100 59 2 8 106 75 173 1.60e-12 66.2
Msa0166160 AT5G02320.2 34.946 186 97 7 6 189 125 288 2.17e-25 103
Msa0166160 AT5G02320.2 39.000 100 59 2 8 106 75 173 1.60e-12 66.2
Msa0166160 AT2G23290.1 48.077 104 51 2 8 110 13 114 1.06e-24 99.4
Msa0166160 AT1G17950.1 36.364 165 94 4 8 171 5 159 1.48e-24 97.4
Msa0166160 AT4G18770.1 40.984 122 71 1 6 127 215 335 1.55e-24 100
Msa0166160 AT4G37260.1 45.794 107 55 2 8 113 13 117 1.84e-24 99.0
Msa0166160 AT5G58850.1 49.000 100 48 2 4 102 101 198 5.71e-24 99.0
Msa0166160 AT5G11050.1 47.000 100 50 2 4 102 101 198 5.42e-23 96.3
Msa0166160 AT3G09370.2 42.453 106 58 2 5 109 132 235 2.12e-22 94.7
Msa0166160 AT3G09370.2 37.500 104 63 2 8 110 83 185 2.25e-12 65.9
Msa0166160 AT3G29020.1 36.885 122 76 1 8 129 65 185 2.23e-22 91.7
Msa0166160 AT3G09370.1 42.453 106 58 2 5 109 127 230 2.26e-22 94.7
Msa0166160 AT3G09370.1 37.500 104 63 2 8 110 78 180 2.33e-12 65.9
Msa0166160 AT3G09370.3 42.453 106 58 2 5 109 140 243 2.56e-22 94.7
Msa0166160 AT3G09370.3 37.500 104 63 2 8 110 91 193 2.10e-12 65.9
Msa0166160 AT3G29020.2 36.585 123 77 1 8 130 67 188 3.22e-22 92.4
Msa0166160 AT5G40360.1 45.263 95 51 1 8 102 158 251 4.48e-22 92.8
Msa0166160 AT1G66380.3 55.844 77 34 0 33 109 2 78 7.73e-22 86.7
Msa0166160 AT1G73410.1 44.762 105 55 2 8 111 6 108 1.13e-21 89.7
Msa0166160 AT5G11510.3 38.679 106 62 2 6 110 79 182 1.20e-21 93.2
Msa0166160 AT5G11510.3 36.538 104 64 2 8 110 29 131 1.25e-12 67.0
Msa0166160 AT5G11510.1 38.679 106 62 2 6 110 79 182 1.20e-21 93.2
Msa0166160 AT5G11510.1 36.538 104 64 2 8 110 29 131 1.25e-12 67.0
Msa0166160 AT5G11510.4 38.679 106 62 2 6 110 79 182 1.20e-21 93.2
Msa0166160 AT5G11510.4 36.538 104 64 2 8 110 29 131 1.25e-12 67.0
Msa0166160 AT5G11510.5 38.095 105 64 1 6 110 79 182 1.26e-21 92.8
Msa0166160 AT5G11510.5 36.538 104 64 2 8 110 29 131 1.12e-12 67.0
Msa0166160 AT5G11510.2 38.095 105 64 1 6 110 79 182 1.40e-21 92.8
Msa0166160 AT5G11510.2 36.538 104 64 2 8 110 29 131 1.24e-12 66.6
Msa0166160 AT1G69560.1 39.474 114 66 2 5 117 104 215 1.45e-21 91.3
Msa0166160 AT1G73410.2 44.762 105 55 2 8 111 6 108 1.64e-21 88.6
Msa0166160 AT1G69560.2 39.474 114 66 2 5 117 120 231 1.83e-21 90.9
Msa0166160 AT3G27785.1 42.857 98 55 1 5 102 186 282 2.37e-21 91.7
Msa0166160 AT5G17800.1 37.190 121 75 1 8 128 93 212 7.58e-21 89.0
Msa0166160 AT4G33450.1 40.952 105 61 1 5 109 16 119 1.15e-20 87.4
Msa0166160 AT4G32730.1 38.679 106 62 2 6 110 85 188 1.51e-20 89.7
Msa0166160 AT4G32730.1 35.577 104 65 2 8 110 35 137 4.79e-13 68.2
Msa0166160 AT4G32730.5 38.679 106 62 2 6 110 85 188 1.56e-20 89.7
Msa0166160 AT4G32730.5 35.577 104 65 2 8 110 35 137 5.73e-13 67.8
Msa0166160 AT4G32730.4 38.679 106 62 2 6 110 85 188 1.56e-20 89.7
Msa0166160 AT4G32730.4 35.577 104 65 2 8 110 35 137 5.73e-13 67.8
Msa0166160 AT4G32730.3 38.679 106 62 2 6 110 85 188 1.56e-20 89.7
Msa0166160 AT4G32730.3 35.577 104 65 2 8 110 35 137 5.73e-13 67.8
Msa0166160 AT4G32730.2 38.679 106 62 2 6 110 85 188 1.56e-20 89.7
Msa0166160 AT4G32730.2 35.577 104 65 2 8 110 35 137 5.73e-13 67.8
Msa0166160 AT1G26780.2 42.857 105 57 2 6 109 96 198 1.58e-20 88.6
Msa0166160 AT1G26780.1 42.857 105 57 2 6 109 96 198 1.69e-20 87.4
Msa0166160 AT5G14750.4 46.753 77 34 1 52 121 1 77 4.55e-20 83.2
Msa0166160 AT5G14750.2 46.753 77 34 1 52 121 1 77 4.55e-20 83.2
Msa0166160 AT3G23250.2 60.000 60 24 0 52 111 1 60 4.62e-20 85.1
Msa0166160 AT1G22640.3 62.712 59 22 0 52 110 1 59 9.79e-20 83.6
Msa0166160 AT4G00540.2 43.243 111 57 3 5 111 100 208 1.73e-19 86.3
Msa0166160 AT2G25230.1 36.290 124 75 3 1 123 19 139 2.01e-19 83.6
Msa0166160 AT4G00540.1 43.243 111 57 3 5 111 98 206 2.86e-19 85.9
Msa0166160 AT5G59780.1 71.111 45 13 0 67 111 4 48 4.01e-18 78.6
Msa0166160 AT3G46130.2 71.111 45 13 0 67 111 4 48 5.95e-18 79.0
Msa0166160 AT2G37630.1 41.000 100 57 1 11 108 7 106 1.10e-17 80.9
Msa0166160 AT5G40430.1 29.801 151 101 4 1 150 47 193 1.25e-16 76.6
Msa0166160 AT1G71030.1 42.222 90 50 2 26 115 1 88 2.76e-16 74.3
Msa0166160 AT1G18960.1 37.864 103 61 2 8 110 10 109 3.40e-16 75.9
Msa0166160 AT1G71030.2 49.296 71 35 1 45 115 5 74 8.44e-16 72.8
Msa0166160 AT1G66380.2 44.706 85 45 1 1 83 1 85 2.81e-15 69.7
Msa0166160 AT1G14350.2 35.000 140 77 3 10 143 27 158 2.95e-15 74.3
Msa0166160 AT1G14350.1 35.000 140 77 3 10 143 27 158 2.95e-15 74.3
Msa0166160 AT2G02820.3 36.275 102 64 1 10 111 32 132 2.51e-14 70.9
Msa0166160 AT2G02820.1 36.275 102 64 1 10 111 32 132 3.71e-14 70.9
Msa0166160 AT2G02820.2 36.275 102 64 1 10 111 32 132 4.30e-14 70.9
Msa0166160 AT5G39700.1 33.051 118 78 1 7 124 55 171 5.23e-14 68.2
Msa0166160 AT4G25560.2 58.696 46 19 0 64 109 2 47 1.37e-12 64.7
Msa0166160 AT3G18100.3 33.871 124 74 3 7 129 497 613 8.72e-12 64.3
Msa0166160 AT3G18100.4 33.871 124 74 3 7 129 384 500 9.17e-12 64.3
Msa0166160 AT3G18100.1 33.871 124 74 3 7 129 545 661 9.89e-12 64.3
Msa0166160 AT3G18100.2 33.871 124 74 3 7 129 332 448 1.05e-11 63.9
Msa0166160 AT1G74650.3 50.000 60 27 1 71 127 1 60 1.17e-11 62.8
Msa0166160 AT5G61420.1 58.182 55 22 1 75 129 2 55 4.52e-11 61.2
Msa0166160 AT3G28910.2 62.500 40 15 0 71 110 1 40 5.84e-11 60.8

Find 59 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCTTCAACATTAAA+AGG 0.180903 1_4:-47180030 None:intergenic
TATGATACTTGGGATTATTC+AGG 0.272070 1_4:+47180968 Msa0166160:CDS
GGTGACAAGGAAAATGAATT+AGG 0.281462 1_4:+47180890 Msa0166160:CDS
CACATCAATGCCTTTGTTGT+TGG 0.293740 1_4:-47180735 None:intergenic
CAAGATTGCTCGTAGGCTTC+CGG 0.324548 1_4:+47180492 Msa0166160:CDS
AAAGGGCCATGTTTGAGATT+TGG 0.327588 1_4:-47180012 None:intergenic
TGGATAGAAGAATTGCAAAA+TGG 0.332850 1_4:+47180863 Msa0166160:CDS
GAAGAATTGCAAAATGGATT+TGG 0.337908 1_4:+47180869 Msa0166160:CDS
CGGAAGCCTACGAGCAATCT+TGG 0.350080 1_4:-47180491 None:intergenic
TTTGCTATTGTGCAGGGCTT+AGG 0.353292 1_4:+47179944 Msa0166160:intron
ATTTCATTGTCTGTTCTTCC+CGG 0.355558 1_4:-47180511 None:intergenic
CCAAGTATCATATTCTTGTT+GGG 0.357858 1_4:-47180957 None:intergenic
CCCAAGTATCATATTCTTGT+TGG 0.367284 1_4:-47180958 None:intergenic
AAGATTGCTCGTAGGCTTCC+GGG 0.369949 1_4:+47180493 Msa0166160:CDS
ACAATGAAATCAAGAACTAT+TGG 0.380014 1_4:+47180524 Msa0166160:CDS
AAAATTTGCGTAAGGGGACT+TGG 0.391844 1_4:+47179482 Msa0166160:CDS
CTTTGTCTCTCCCTCACTGT+TGG 0.392362 1_4:-47180762 None:intergenic
CCCAACAAGAATATGATACT+TGG 0.395763 1_4:+47180957 Msa0166160:CDS
TAAGCTTTGTGACCCGTCTT+GGG 0.397434 1_4:+47179530 Msa0166160:CDS
CAGTTGTCCCTTATCAGATT+GGG 0.398944 1_4:+47180799 Msa0166160:CDS
TCTCATTCCCCAATCTGATA+AGG 0.405428 1_4:-47180807 None:intergenic
CTCATTCCCCAATCTGATAA+GGG 0.425206 1_4:-47180806 None:intergenic
GATATTCTACTTTCATGATA+AGG 0.428909 1_4:-47180836 None:intergenic
TGTTCATCTTCAGCAGCAAT+GGG 0.432168 1_4:+47180059 Msa0166160:CDS
GTGGTAAAAGCTGTAGGTTA+AGG 0.437445 1_4:+47179971 Msa0166160:CDS
ACAGTTGTCCCTTATCAGAT+TGG 0.441459 1_4:+47180798 Msa0166160:CDS
ATAAGCTTTGTGACCCGTCT+TGG 0.451081 1_4:+47179529 Msa0166160:CDS
CCCGTCTTGGGGAACGAAGA+TGG 0.455075 1_4:+47179542 Msa0166160:CDS
TTGTTCATCTTCAGCAGCAA+TGG 0.478653 1_4:+47180058 Msa0166160:CDS
CCGTCTTGGGGAACGAAGAT+GGG 0.508003 1_4:+47179543 Msa0166160:CDS
TGTTGTTGGAATCATGTGCT+AGG 0.515250 1_4:-47180721 None:intergenic
CCATCTTCGTTCCCCAAGAC+GGG 0.522823 1_4:-47179542 None:intergenic
CCCATCTTCGTTCCCCAAGA+CGG 0.524030 1_4:-47179543 None:intergenic
GATTCCCTTGCTAAAGTAGC+TGG 0.532159 1_4:+47179565 Msa0166160:CDS
GCAAGGAGAAAATTTGCGTA+AGG 0.537367 1_4:+47179474 Msa0166160:CDS
TCTCCTCTTCAACATTAAAA+GGG 0.538793 1_4:-47180029 None:intergenic
ATGAAAGTAGAATATCAGAT+TGG 0.543464 1_4:+47180843 Msa0166160:CDS
AAGGAGAAAATTTGCGTAAG+GGG 0.561164 1_4:+47179476 Msa0166160:CDS
CAAGTATCATATTCTTGTTG+GGG 0.561630 1_4:-47180956 None:intergenic
CCAACAAGAATATGATACTT+GGG 0.577052 1_4:+47180958 Msa0166160:CDS
AAATATCAAGCAGCCATGCA+AGG 0.579777 1_4:+47179457 None:intergenic
AAGCTTTGTGACCCGTCTTG+GGG 0.581255 1_4:+47179531 Msa0166160:CDS
GTAAAAGCTGTAGGTTAAGG+TGG 0.582682 1_4:+47179974 Msa0166160:CDS
GGAGAAGTGGTAAAAGCTGT+AGG 0.586752 1_4:+47179965 Msa0166160:CDS
CAACAGTGAGGGAGAGACAA+AGG 0.588133 1_4:+47180763 Msa0166160:CDS
CAAGGAGAAAATTTGCGTAA+GGG 0.588447 1_4:+47179475 Msa0166160:CDS
TGTGCAGGGCTTAGGAGAAG+TGG 0.594454 1_4:+47179952 Msa0166160:intron
ACATACCAGCTACTTTAGCA+AGG 0.595671 1_4:-47179570 None:intergenic
TAAGGGGACTTGGCTTCAAG+AGG 0.603937 1_4:+47179492 Msa0166160:CDS
GATGTGATTTCCAACAGTGA+GGG 0.606719 1_4:+47180752 Msa0166160:CDS
AGTTGTCCCTTATCAGATTG+GGG 0.608510 1_4:+47180800 Msa0166160:CDS
CTTCGACCAAATCTCAAACA+TGG 0.624992 1_4:+47180006 Msa0166160:CDS
GCAAAATGGATTTGGTGACA+AGG 0.627552 1_4:+47180877 Msa0166160:CDS
CATACCAGCTACTTTAGCAA+GGG 0.635589 1_4:-47179569 None:intergenic
TGATGTGATTTCCAACAGTG+AGG 0.650894 1_4:+47180751 Msa0166160:CDS
GCACATGATTCCAACAACAA+AGG 0.673238 1_4:+47180725 Msa0166160:CDS
GGTGGTCCAAGATTGCTCGT+AGG 0.677553 1_4:+47180485 Msa0166160:intron
AAGAGAGTACAAGTTCAACA+AGG 0.722889 1_4:+47180562 Msa0166160:CDS
GTTCATCTTCAGCAGCAATG+GGG 0.726709 1_4:+47180060 Msa0166160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATGTATATAATATCAAT+AGG - chr1_4:47180600-47180619 None:intergenic 10.0%
!! ATTATGTATATAATATCAAT+AGG - chr1_4:47180600-47180619 None:intergenic 10.0%
!!! TTATATTTTTTCAACGTTAT+AGG - chr1_4:47180129-47180148 None:intergenic 15.0%
!! TATAGTTGAATTTAATTAGT+AGG + chr1_4:47180160-47180179 Msa0166160:intron 15.0%
!! TTTAAGAACTAATATTACAA+AGG + chr1_4:47180255-47180274 Msa0166160:intron 15.0%
!!! CAAGATTTTAATAGAATAAA+TGG + chr1_4:47180914-47180933 Msa0166160:CDS 15.0%
!!! TTATATTTTTTCAACGTTAT+AGG - chr1_4:47180129-47180148 None:intergenic 15.0%
!! TATAGTTGAATTTAATTAGT+AGG + chr1_4:47180160-47180179 Msa0166160:intron 15.0%
!! TTTAAGAACTAATATTACAA+AGG + chr1_4:47180255-47180274 Msa0166160:intron 15.0%
!!! CAAGATTTTAATAGAATAAA+TGG + chr1_4:47180914-47180933 Msa0166160:CDS 15.0%
!!! GTATGAATCTTGTTTAATTA+TGG + chr1_4:47179595-47179614 Msa0166160:intron 20.0%
!!! TAGATATTTTATGGTTACTA+GGG - chr1_4:47180104-47180123 None:intergenic 20.0%
!!! TTAGATATTTTATGGTTACT+AGG - chr1_4:47180105-47180124 None:intergenic 20.0%
!!! TTATAGGCTTAGATATTTTA+TGG - chr1_4:47180113-47180132 None:intergenic 20.0%
!! TCTATAACAATTCTTATACT+AGG - chr1_4:47180416-47180435 None:intergenic 20.0%
!! GTAACAATAACAATGAAATT+AGG + chr1_4:47180464-47180483 Msa0166160:intron 20.0%
!!! GTATGAATCTTGTTTAATTA+TGG + chr1_4:47179595-47179614 Msa0166160:intron 20.0%
!!! TAGATATTTTATGGTTACTA+GGG - chr1_4:47180104-47180123 None:intergenic 20.0%
!!! TTAGATATTTTATGGTTACT+AGG - chr1_4:47180105-47180124 None:intergenic 20.0%
!!! TTATAGGCTTAGATATTTTA+TGG - chr1_4:47180113-47180132 None:intergenic 20.0%
!! TCTATAACAATTCTTATACT+AGG - chr1_4:47180416-47180435 None:intergenic 20.0%
!! GTAACAATAACAATGAAATT+AGG + chr1_4:47180464-47180483 Msa0166160:intron 20.0%
! TTTGATATTCCAAATAATCG+CGG + chr1_4:47179662-47179681 Msa0166160:intron 25.0%
! CATGCATATGTTGAAAAATA+TGG + chr1_4:47179912-47179931 Msa0166160:intron 25.0%
!! AGATATTTTATGGTTACTAG+GGG - chr1_4:47180103-47180122 None:intergenic 25.0%
! ACAATAACAATGAAATTAGG+TGG + chr1_4:47180467-47180486 Msa0166160:intron 25.0%
! ACAATGAAATCAAGAACTAT+TGG + chr1_4:47180524-47180543 Msa0166160:CDS 25.0%
!! ACTTACACTATTTTATTCTC+AGG + chr1_4:47180674-47180693 Msa0166160:intron 25.0%
! GATATTCTACTTTCATGATA+AGG - chr1_4:47180839-47180858 None:intergenic 25.0%
! ATGAAAGTAGAATATCAGAT+TGG + chr1_4:47180843-47180862 Msa0166160:CDS 25.0%
! TTTGATATTCCAAATAATCG+CGG + chr1_4:47179662-47179681 Msa0166160:intron 25.0%
! CATGCATATGTTGAAAAATA+TGG + chr1_4:47179912-47179931 Msa0166160:intron 25.0%
!! AGATATTTTATGGTTACTAG+GGG - chr1_4:47180103-47180122 None:intergenic 25.0%
! ACAATAACAATGAAATTAGG+TGG + chr1_4:47180467-47180486 Msa0166160:intron 25.0%
! ACAATGAAATCAAGAACTAT+TGG + chr1_4:47180524-47180543 Msa0166160:CDS 25.0%
!! ACTTACACTATTTTATTCTC+AGG + chr1_4:47180674-47180693 Msa0166160:intron 25.0%
! GATATTCTACTTTCATGATA+AGG - chr1_4:47180839-47180858 None:intergenic 25.0%
! ATGAAAGTAGAATATCAGAT+TGG + chr1_4:47180843-47180862 Msa0166160:CDS 25.0%
TAGAGAGAAAATAGCATTTG+TGG + chr1_4:47179626-47179645 Msa0166160:intron 30.0%
TCTCCTCTTCAACATTAAAA+GGG - chr1_4:47180032-47180051 None:intergenic 30.0%
TGGATAGAAGAATTGCAAAA+TGG + chr1_4:47180863-47180882 Msa0166160:CDS 30.0%
! GAAGAATTGCAAAATGGATT+TGG + chr1_4:47180869-47180888 Msa0166160:CDS 30.0%
CAAGTATCATATTCTTGTTG+GGG - chr1_4:47180959-47180978 None:intergenic 30.0%
CCAAGTATCATATTCTTGTT+GGG - chr1_4:47180960-47180979 None:intergenic 30.0%
CCAACAAGAATATGATACTT+GGG + chr1_4:47180958-47180977 Msa0166160:CDS 30.0%
TATGATACTTGGGATTATTC+AGG + chr1_4:47180968-47180987 Msa0166160:CDS 30.0%
!! GGATTATTCAGGTTTTCTAT+GGG + chr1_4:47180979-47180998 Msa0166160:CDS 30.0%
TAGAGAGAAAATAGCATTTG+TGG + chr1_4:47179626-47179645 Msa0166160:intron 30.0%
TCTCCTCTTCAACATTAAAA+GGG - chr1_4:47180032-47180051 None:intergenic 30.0%
TGGATAGAAGAATTGCAAAA+TGG + chr1_4:47180863-47180882 Msa0166160:CDS 30.0%
! GAAGAATTGCAAAATGGATT+TGG + chr1_4:47180869-47180888 Msa0166160:CDS 30.0%
CAAGTATCATATTCTTGTTG+GGG - chr1_4:47180959-47180978 None:intergenic 30.0%
CCAAGTATCATATTCTTGTT+GGG - chr1_4:47180960-47180979 None:intergenic 30.0%
CCAACAAGAATATGATACTT+GGG + chr1_4:47180958-47180977 Msa0166160:CDS 30.0%
TATGATACTTGGGATTATTC+AGG + chr1_4:47180968-47180987 Msa0166160:CDS 30.0%
!! GGATTATTCAGGTTTTCTAT+GGG + chr1_4:47180979-47180998 Msa0166160:CDS 30.0%
CAAGGAGAAAATTTGCGTAA+GGG + chr1_4:47179475-47179494 Msa0166160:CDS 35.0%
AAGGAGAAAATTTGCGTAAG+GGG + chr1_4:47179476-47179495 Msa0166160:CDS 35.0%
TAAATAAAGATCCGCGATCT+AGG - chr1_4:47179762-47179781 None:intergenic 35.0%
CTCTCCTCTTCAACATTAAA+AGG - chr1_4:47180033-47180052 None:intergenic 35.0%
CGTCAATATTCTTACACACA+CGG - chr1_4:47180329-47180348 None:intergenic 35.0%
CGTGTGTGTAAGAATATTGA+CGG + chr1_4:47180327-47180346 Msa0166160:intron 35.0%
ATTTCATTGTCTGTTCTTCC+CGG - chr1_4:47180514-47180533 None:intergenic 35.0%
! AAGAGAGTACAAGTTCAACA+AGG + chr1_4:47180562-47180581 Msa0166160:CDS 35.0%
GGTGACAAGGAAAATGAATT+AGG + chr1_4:47180890-47180909 Msa0166160:CDS 35.0%
CCCAACAAGAATATGATACT+TGG + chr1_4:47180957-47180976 Msa0166160:CDS 35.0%
CCCAAGTATCATATTCTTGT+TGG - chr1_4:47180961-47180980 None:intergenic 35.0%
!! GGGATTATTCAGGTTTTCTA+TGG + chr1_4:47180978-47180997 Msa0166160:CDS 35.0%
CAAGGAGAAAATTTGCGTAA+GGG + chr1_4:47179475-47179494 Msa0166160:CDS 35.0%
AAGGAGAAAATTTGCGTAAG+GGG + chr1_4:47179476-47179495 Msa0166160:CDS 35.0%
TAAATAAAGATCCGCGATCT+AGG - chr1_4:47179762-47179781 None:intergenic 35.0%
CTCTCCTCTTCAACATTAAA+AGG - chr1_4:47180033-47180052 None:intergenic 35.0%
CGTCAATATTCTTACACACA+CGG - chr1_4:47180329-47180348 None:intergenic 35.0%
CGTGTGTGTAAGAATATTGA+CGG + chr1_4:47180327-47180346 Msa0166160:intron 35.0%
ATTTCATTGTCTGTTCTTCC+CGG - chr1_4:47180514-47180533 None:intergenic 35.0%
! AAGAGAGTACAAGTTCAACA+AGG + chr1_4:47180562-47180581 Msa0166160:CDS 35.0%
GGTGACAAGGAAAATGAATT+AGG + chr1_4:47180890-47180909 Msa0166160:CDS 35.0%
CCCAACAAGAATATGATACT+TGG + chr1_4:47180957-47180976 Msa0166160:CDS 35.0%
CCCAAGTATCATATTCTTGT+TGG - chr1_4:47180961-47180980 None:intergenic 35.0%
!! GGGATTATTCAGGTTTTCTA+TGG + chr1_4:47180978-47180997 Msa0166160:CDS 35.0%
! ACGCAAATTTTCTCCTTGCA+TGG - chr1_4:47179473-47179492 None:intergenic 40.0%
GCAAGGAGAAAATTTGCGTA+AGG + chr1_4:47179474-47179493 Msa0166160:CDS 40.0%
AAAATTTGCGTAAGGGGACT+TGG + chr1_4:47179482-47179501 Msa0166160:CDS 40.0%
! CATACCAGCTACTTTAGCAA+GGG - chr1_4:47179572-47179591 None:intergenic 40.0%
! ACATACCAGCTACTTTAGCA+AGG - chr1_4:47179573-47179592 None:intergenic 40.0%
TAGCAGTTGCATTGTGGTTT+CGG + chr1_4:47179710-47179729 Msa0166160:intron 40.0%
TTATGTTGCGAGTGCAATTG+CGG + chr1_4:47179840-47179859 Msa0166160:intron 40.0%
!! ACATCTGTTTGCTATTGTGC+AGG + chr1_4:47179937-47179956 Msa0166160:intron 40.0%
!! CATCTGTTTGCTATTGTGCA+GGG + chr1_4:47179938-47179957 Msa0166160:intron 40.0%
GTGGTAAAAGCTGTAGGTTA+AGG + chr1_4:47179971-47179990 Msa0166160:CDS 40.0%
GTAAAAGCTGTAGGTTAAGG+TGG + chr1_4:47179974-47179993 Msa0166160:CDS 40.0%
CTTCGACCAAATCTCAAACA+TGG + chr1_4:47180006-47180025 Msa0166160:CDS 40.0%
! AAAGGGCCATGTTTGAGATT+TGG - chr1_4:47180015-47180034 None:intergenic 40.0%
! TGGCCCTTTTAATGTTGAAG+AGG + chr1_4:47180026-47180045 Msa0166160:CDS 40.0%
TTGTTCATCTTCAGCAGCAA+TGG + chr1_4:47180058-47180077 Msa0166160:CDS 40.0%
TGTTCATCTTCAGCAGCAAT+GGG + chr1_4:47180059-47180078 Msa0166160:CDS 40.0%
TGTTGTTGGAATCATGTGCT+AGG - chr1_4:47180724-47180743 None:intergenic 40.0%
GCACATGATTCCAACAACAA+AGG + chr1_4:47180725-47180744 Msa0166160:CDS 40.0%
! CACATCAATGCCTTTGTTGT+TGG - chr1_4:47180738-47180757 None:intergenic 40.0%
TGATGTGATTTCCAACAGTG+AGG + chr1_4:47180751-47180770 Msa0166160:CDS 40.0%
GATGTGATTTCCAACAGTGA+GGG + chr1_4:47180752-47180771 Msa0166160:CDS 40.0%
ACAGTTGTCCCTTATCAGAT+TGG + chr1_4:47180798-47180817 Msa0166160:CDS 40.0%
CAGTTGTCCCTTATCAGATT+GGG + chr1_4:47180799-47180818 Msa0166160:CDS 40.0%
AGTTGTCCCTTATCAGATTG+GGG + chr1_4:47180800-47180819 Msa0166160:CDS 40.0%
CTCATTCCCCAATCTGATAA+GGG - chr1_4:47180809-47180828 None:intergenic 40.0%
TCTCATTCCCCAATCTGATA+AGG - chr1_4:47180810-47180829 None:intergenic 40.0%
!! GCAAAATGGATTTGGTGACA+AGG + chr1_4:47180877-47180896 Msa0166160:CDS 40.0%
! ACGCAAATTTTCTCCTTGCA+TGG - chr1_4:47179473-47179492 None:intergenic 40.0%
GCAAGGAGAAAATTTGCGTA+AGG + chr1_4:47179474-47179493 Msa0166160:CDS 40.0%
AAAATTTGCGTAAGGGGACT+TGG + chr1_4:47179482-47179501 Msa0166160:CDS 40.0%
! CATACCAGCTACTTTAGCAA+GGG - chr1_4:47179572-47179591 None:intergenic 40.0%
! ACATACCAGCTACTTTAGCA+AGG - chr1_4:47179573-47179592 None:intergenic 40.0%
TAGCAGTTGCATTGTGGTTT+CGG + chr1_4:47179710-47179729 Msa0166160:intron 40.0%
TTATGTTGCGAGTGCAATTG+CGG + chr1_4:47179840-47179859 Msa0166160:intron 40.0%
!! ACATCTGTTTGCTATTGTGC+AGG + chr1_4:47179937-47179956 Msa0166160:intron 40.0%
!! CATCTGTTTGCTATTGTGCA+GGG + chr1_4:47179938-47179957 Msa0166160:intron 40.0%
GTGGTAAAAGCTGTAGGTTA+AGG + chr1_4:47179971-47179990 Msa0166160:CDS 40.0%
GTAAAAGCTGTAGGTTAAGG+TGG + chr1_4:47179974-47179993 Msa0166160:CDS 40.0%
CTTCGACCAAATCTCAAACA+TGG + chr1_4:47180006-47180025 Msa0166160:CDS 40.0%
! AAAGGGCCATGTTTGAGATT+TGG - chr1_4:47180015-47180034 None:intergenic 40.0%
! TGGCCCTTTTAATGTTGAAG+AGG + chr1_4:47180026-47180045 Msa0166160:CDS 40.0%
TTGTTCATCTTCAGCAGCAA+TGG + chr1_4:47180058-47180077 Msa0166160:CDS 40.0%
TGTTCATCTTCAGCAGCAAT+GGG + chr1_4:47180059-47180078 Msa0166160:CDS 40.0%
TGTTGTTGGAATCATGTGCT+AGG - chr1_4:47180724-47180743 None:intergenic 40.0%
GCACATGATTCCAACAACAA+AGG + chr1_4:47180725-47180744 Msa0166160:CDS 40.0%
! CACATCAATGCCTTTGTTGT+TGG - chr1_4:47180738-47180757 None:intergenic 40.0%
TGATGTGATTTCCAACAGTG+AGG + chr1_4:47180751-47180770 Msa0166160:CDS 40.0%
GATGTGATTTCCAACAGTGA+GGG + chr1_4:47180752-47180771 Msa0166160:CDS 40.0%
ACAGTTGTCCCTTATCAGAT+TGG + chr1_4:47180798-47180817 Msa0166160:CDS 40.0%
CAGTTGTCCCTTATCAGATT+GGG + chr1_4:47180799-47180818 Msa0166160:CDS 40.0%
AGTTGTCCCTTATCAGATTG+GGG + chr1_4:47180800-47180819 Msa0166160:CDS 40.0%
CTCATTCCCCAATCTGATAA+GGG - chr1_4:47180809-47180828 None:intergenic 40.0%
TCTCATTCCCCAATCTGATA+AGG - chr1_4:47180810-47180829 None:intergenic 40.0%
!! GCAAAATGGATTTGGTGACA+AGG + chr1_4:47180877-47180896 Msa0166160:CDS 40.0%
! ATAAGCTTTGTGACCCGTCT+TGG + chr1_4:47179529-47179548 Msa0166160:CDS 45.0%
! TAAGCTTTGTGACCCGTCTT+GGG + chr1_4:47179530-47179549 Msa0166160:CDS 45.0%
GATTCCCTTGCTAAAGTAGC+TGG + chr1_4:47179565-47179584 Msa0166160:CDS 45.0%
CCACAATGCAACTGCTATTG+AGG - chr1_4:47179707-47179726 None:intergenic 45.0%
CCTCAATAGCAGTTGCATTG+TGG + chr1_4:47179704-47179723 Msa0166160:intron 45.0%
CGATCTAGGTCACAACACAA+CGG - chr1_4:47179748-47179767 None:intergenic 45.0%
TTGTGTTGTGACCTAGATCG+CGG + chr1_4:47179748-47179767 Msa0166160:intron 45.0%
!! TTTGCTATTGTGCAGGGCTT+AGG + chr1_4:47179944-47179963 Msa0166160:intron 45.0%
GGAGAAGTGGTAAAAGCTGT+AGG + chr1_4:47179965-47179984 Msa0166160:CDS 45.0%
GTTCATCTTCAGCAGCAATG+GGG + chr1_4:47180060-47180079 Msa0166160:CDS 45.0%
! ATAAGCTTTGTGACCCGTCT+TGG + chr1_4:47179529-47179548 Msa0166160:CDS 45.0%
! TAAGCTTTGTGACCCGTCTT+GGG + chr1_4:47179530-47179549 Msa0166160:CDS 45.0%
GATTCCCTTGCTAAAGTAGC+TGG + chr1_4:47179565-47179584 Msa0166160:CDS 45.0%
CCACAATGCAACTGCTATTG+AGG - chr1_4:47179707-47179726 None:intergenic 45.0%
CCTCAATAGCAGTTGCATTG+TGG + chr1_4:47179704-47179723 Msa0166160:intron 45.0%
CGATCTAGGTCACAACACAA+CGG - chr1_4:47179748-47179767 None:intergenic 45.0%
TTGTGTTGTGACCTAGATCG+CGG + chr1_4:47179748-47179767 Msa0166160:intron 45.0%
!! TTTGCTATTGTGCAGGGCTT+AGG + chr1_4:47179944-47179963 Msa0166160:intron 45.0%
GGAGAAGTGGTAAAAGCTGT+AGG + chr1_4:47179965-47179984 Msa0166160:CDS 45.0%
GTTCATCTTCAGCAGCAATG+GGG + chr1_4:47180060-47180079 Msa0166160:CDS 45.0%
!! CAAATTTAAAAAATAATTAA+AGG - chr1_4:47180445-47180464 None:intergenic 5.0%
!! CAAATTTAAAAAATAATTAA+AGG - chr1_4:47180445-47180464 None:intergenic 5.0%
TAAGGGGACTTGGCTTCAAG+AGG + chr1_4:47179492-47179511 Msa0166160:CDS 50.0%
! AAGCTTTGTGACCCGTCTTG+GGG + chr1_4:47179531-47179550 Msa0166160:CDS 50.0%
CGCATTGGACCGCGATTATT+TGG - chr1_4:47179674-47179693 None:intergenic 50.0%
GCGGTCCAATGCGATCAATA+CGG + chr1_4:47179681-47179700 Msa0166160:intron 50.0%
! TGAGGCCGTATTGATCGCAT+TGG - chr1_4:47179689-47179708 None:intergenic 50.0%
CAAGATTGCTCGTAGGCTTC+CGG + chr1_4:47180492-47180511 Msa0166160:CDS 50.0%
AAGATTGCTCGTAGGCTTCC+GGG + chr1_4:47180493-47180512 Msa0166160:CDS 50.0%
CTTTGTCTCTCCCTCACTGT+TGG - chr1_4:47180765-47180784 None:intergenic 50.0%
CAACAGTGAGGGAGAGACAA+AGG + chr1_4:47180763-47180782 Msa0166160:CDS 50.0%
TAAGGGGACTTGGCTTCAAG+AGG + chr1_4:47179492-47179511 Msa0166160:CDS 50.0%
! AAGCTTTGTGACCCGTCTTG+GGG + chr1_4:47179531-47179550 Msa0166160:CDS 50.0%
CGCATTGGACCGCGATTATT+TGG - chr1_4:47179674-47179693 None:intergenic 50.0%
GCGGTCCAATGCGATCAATA+CGG + chr1_4:47179681-47179700 Msa0166160:intron 50.0%
! TGAGGCCGTATTGATCGCAT+TGG - chr1_4:47179689-47179708 None:intergenic 50.0%
CAAGATTGCTCGTAGGCTTC+CGG + chr1_4:47180492-47180511 Msa0166160:CDS 50.0%
AAGATTGCTCGTAGGCTTCC+GGG + chr1_4:47180493-47180512 Msa0166160:CDS 50.0%
CTTTGTCTCTCCCTCACTGT+TGG - chr1_4:47180765-47180784 None:intergenic 50.0%
CAACAGTGAGGGAGAGACAA+AGG + chr1_4:47180763-47180782 Msa0166160:CDS 50.0%
CCATCTTCGTTCCCCAAGAC+GGG - chr1_4:47179545-47179564 None:intergenic 55.0%
CCCATCTTCGTTCCCCAAGA+CGG - chr1_4:47179546-47179565 None:intergenic 55.0%
CCGTCTTGGGGAACGAAGAT+GGG + chr1_4:47179543-47179562 Msa0166160:CDS 55.0%
TGTGCAGGGCTTAGGAGAAG+TGG + chr1_4:47179952-47179971 Msa0166160:intron 55.0%
GGTGGTCCAAGATTGCTCGT+AGG + chr1_4:47180485-47180504 Msa0166160:intron 55.0%
CGGAAGCCTACGAGCAATCT+TGG - chr1_4:47180494-47180513 None:intergenic 55.0%
CCATCTTCGTTCCCCAAGAC+GGG - chr1_4:47179545-47179564 None:intergenic 55.0%
CCCATCTTCGTTCCCCAAGA+CGG - chr1_4:47179546-47179565 None:intergenic 55.0%
CCGTCTTGGGGAACGAAGAT+GGG + chr1_4:47179543-47179562 Msa0166160:CDS 55.0%
TGTGCAGGGCTTAGGAGAAG+TGG + chr1_4:47179952-47179971 Msa0166160:intron 55.0%
GGTGGTCCAAGATTGCTCGT+AGG + chr1_4:47180485-47180504 Msa0166160:intron 55.0%
CGGAAGCCTACGAGCAATCT+TGG - chr1_4:47180494-47180513 None:intergenic 55.0%
CCCGTCTTGGGGAACGAAGA+TGG + chr1_4:47179542-47179561 Msa0166160:CDS 60.0%
CCCGTCTTGGGGAACGAAGA+TGG + chr1_4:47179542-47179561 Msa0166160:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 47179470 47181006 47179470 ID=Msa0166160;Name=Msa0166160
chr1_4 mRNA 47179470 47181006 47179470 ID=Msa0166160-mRNA-1;Parent=Msa0166160;Name=Msa0166160-mRNA-1;_AED=0.03;_eAED=0.03;_QI=2|0|0|1|1|0.75|4|0|218
chr1_4 exon 47179470 47179586 47179470 ID=Msa0166160-mRNA-1:exon:13621;Parent=Msa0166160-mRNA-1
chr1_4 exon 47179959 47180088 47179959 ID=Msa0166160-mRNA-1:exon:13622;Parent=Msa0166160-mRNA-1
chr1_4 exon 47180486 47180583 47180486 ID=Msa0166160-mRNA-1:exon:13623;Parent=Msa0166160-mRNA-1
chr1_4 exon 47180696 47181006 47180696 ID=Msa0166160-mRNA-1:exon:13624;Parent=Msa0166160-mRNA-1
chr1_4 five_prime_UTR 47179470 47179471 47179470 ID=Msa0166160-mRNA-1:five_prime_utr;Parent=Msa0166160-mRNA-1
chr1_4 CDS 47179472 47179586 47179472 ID=Msa0166160-mRNA-1:cds;Parent=Msa0166160-mRNA-1
chr1_4 CDS 47179959 47180088 47179959 ID=Msa0166160-mRNA-1:cds;Parent=Msa0166160-mRNA-1
chr1_4 CDS 47180486 47180583 47180486 ID=Msa0166160-mRNA-1:cds;Parent=Msa0166160-mRNA-1
chr1_4 CDS 47180696 47181006 47180696 ID=Msa0166160-mRNA-1:cds;Parent=Msa0166160-mRNA-1
Gene Sequence

>Msa0166160

ATGCAAGGAGAAAATTTGCGTAAGGGGACTTGGCTTCAAGAGGAAGATGAACAATTGATAAGCTTTGTGACCCGTCTTGGGGAACGAAGATGGGATTCCCTTGCTAAAGTAGCTGGGCTTAGGAGAAGTGGTAAAAGCTGTAGGTTAAGGTGGTTGAACTATCTTCGACCAAATCTCAAACATGGCCCTTTTAATGTTGAAGAGGAGAGACTTATTGTTCATCTTCAGCAGCAATGGGGTAACAAGTGGTCCAAGATTGCTCGTAGGCTTCCGGGAAGAACAGACAATGAAATCAAGAACTATTGGAGAACTCATTTACAAAAGAGAGTACAAGTTCAACAAGGTGAGTTCATGTATGAAGTAGAAAACCTAGCACATGATTCCAACAACAAAGGCATTGATGTGATTTCCAACAGTGAGGGAGAGACAAAGGAAAGCTCTGTAGACAGTTGTCCCTTATCAGATTGGGGAATGAGAAACTCACCTTATCATGAAAGTAGAATATCAGATTGGATAGAAGAATTGCAAAATGGATTTGGTGACAAGGAAAATGAATTAGGACAAGATTTTAATAGAATAAATGGATCAATGTATGAATATAATCCCCAACAAGAATATGATACTTGGGATTATTCAGGTTTTCTATGGGACTTG
Protein sequence

>Msa0166160

MQGENLRKGTWLQEEDEQLISFVTRLGERRWDSLAKVAGLRRSGKSCRLRWLNYLRPNLKHGPFNVEEERLIVHLQQQWGNKWSKIARRLPGRTDNEIKNYWRTHLQKRVQVQQGEFMYEVENLAHDSNNKGIDVISNSEGETKESSVDSCPLSDWGMRNSPYHESRISDWIEELQNGFGDKENELGQDFNRINGSMYEYNPQQEYDTWDYSGFLWDL