Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167030 | XP_013468354.1 | 75.424 | 236 | 50 | 3 | 1 | 229 | 58 | 292 | 2.06e-108 | 354 |
| Msa0167030 | XP_013468354.1 | 81.426 | 603 | 53 | 6 | 225 | 774 | 1 | 597 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167030 | sp|F4KCE9|KNL2_ARATH | 42.241 | 116 | 64 | 3 | 241 | 354 | 11 | 125 | 2.22e-19 | 96.7 |
| Msa0167030 | sp|F4KCE9|KNL2_ARATH | 47.368 | 76 | 39 | 1 | 3 | 78 | 51 | 125 | 8.51e-13 | 75.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167030 | A0A072VLC9 | 75.424 | 236 | 50 | 3 | 1 | 229 | 58 | 292 | 9.84e-109 | 354 |
| Msa0167030 | A0A072VLC9 | 81.426 | 603 | 53 | 6 | 225 | 774 | 1 | 597 | 0.0 | 935 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0167030 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167030 | MtrunA17_Chr1g0182621 | 81.426 | 603 | 53 | 6 | 225 | 774 | 1 | 597 | 0.0 | 935 |
| Msa0167030 | MtrunA17_Chr1g0182621 | 75.424 | 236 | 50 | 3 | 1 | 229 | 58 | 292 | 1.90e-112 | 354 |
| Msa0167030 | MtrunA17_Chr1g0182621 | 38.750 | 160 | 78 | 5 | 78 | 229 | 246 | 393 | 1.45e-11 | 67.8 |
| Msa0167030 | MtrunA17_Chr1g0182611 | 62.178 | 349 | 91 | 4 | 452 | 759 | 131 | 479 | 1.96e-128 | 392 |
| Msa0167030 | MtrunA17_Chr1g0182611 | 45.909 | 440 | 182 | 9 | 225 | 620 | 1 | 428 | 2.12e-100 | 318 |
| Msa0167030 | MtrunA17_Chr1g0182611 | 55.721 | 201 | 88 | 1 | 1 | 201 | 54 | 253 | 8.21e-60 | 210 |
| Msa0167030 | MtrunA17_Chr7g0231611 | 38.655 | 119 | 61 | 5 | 225 | 339 | 1 | 111 | 9.50e-15 | 76.6 |
| Msa0167030 | MtrunA17_Chr5g0416851 | 38.655 | 119 | 61 | 5 | 225 | 339 | 1 | 111 | 1.01e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0167030 | AT5G02520.1 | 42.241 | 116 | 64 | 3 | 241 | 354 | 11 | 125 | 2.25e-20 | 96.7 |
| Msa0167030 | AT5G02520.1 | 47.368 | 76 | 39 | 1 | 3 | 78 | 51 | 125 | 8.65e-14 | 75.5 |
| Msa0167030 | AT5G02520.2 | 42.241 | 116 | 64 | 3 | 241 | 354 | 11 | 125 | 2.32e-20 | 96.3 |
| Msa0167030 | AT5G02520.2 | 47.368 | 76 | 39 | 1 | 3 | 78 | 51 | 125 | 8.81e-14 | 75.5 |
| Msa0167030 | AT5G02520.3 | 42.241 | 116 | 64 | 3 | 241 | 354 | 11 | 125 | 2.58e-20 | 96.3 |
| Msa0167030 | AT5G02520.3 | 47.368 | 76 | 39 | 1 | 3 | 78 | 51 | 125 | 9.97e-14 | 75.1 |
| Msa0167030 | AT1G58210.1 | 40.217 | 92 | 51 | 1 | 247 | 338 | 64 | 151 | 2.17e-15 | 77.8 |
Find 184 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACCATCAGATAATATTTC+TGG | 0.175942 | 1_4:+48693120 | None:intergenic |
| TTACCATCAAATGATATTTC+TGG | 0.188236 | 1_4:+48693533 | None:intergenic |
| AATGGAGTCTTGCAATTCTC+TGG | 0.210078 | 1_4:+48693800 | None:intergenic |
| AATGGAGTCTTGCAATTCTC+TGG | 0.210078 | 1_4:+48698335 | None:intergenic |
| CAGTAGCAGGTTGCTTCTTC+TGG | 0.230387 | 1_4:+48692802 | None:intergenic |
| CAATTCTCTGGGGCCTCTTC+AGG | 0.246287 | 1_4:+48693812 | None:intergenic |
| CAATTCTCTGGGGCCTCTTC+AGG | 0.246287 | 1_4:+48698347 | None:intergenic |
| CATACGCAGGCTGCTTCTTC+TGG | 0.254613 | 1_4:+48693247 | None:intergenic |
| TTCTACCTCCCTTAGAGTTT+TGG | 0.256165 | 1_4:-48692162 | Msa0167030:CDS |
| TCTTTATCTGGATGTGTTGC+AGG | 0.273995 | 1_4:+48692774 | None:intergenic |
| AGATTTGCTGGTACATTATC+AGG | 0.278683 | 1_4:+48693557 | None:intergenic |
| AGATTTGCTGGTACATTATC+AGG | 0.278683 | 1_4:+48698092 | None:intergenic |
| ATTGGAAAATTTACCAGATC+TGG | 0.281653 | 1_4:+48692413 | None:intergenic |
| GATATTTCTGGAAGATTTGC+TGG | 0.294734 | 1_4:+48693545 | None:intergenic |
| AAATTCTGTTCCTACCTCTT+TGG | 0.307585 | 1_4:-48693400 | Msa0167030:intron |
| TGATTCGGTCAGTGCTGTTT+TGG | 0.309510 | 1_4:-48694024 | Msa0167030:CDS |
| TGATTCGGTCAGTGCTGTTT+TGG | 0.309510 | 1_4:-48698559 | Msa0167030:CDS |
| TCACATACCATGTTATAAAT+AGG | 0.311211 | 1_4:+48692127 | None:intergenic |
| GTCACCAGTGAGTTGGTATT+TGG | 0.327219 | 1_4:+48690227 | None:intergenic |
| CCGTGAGATTACAGAAATTC+AGG | 0.340294 | 1_4:-48692028 | Msa0167030:CDS |
| TTGATTGCGCCAAAACTCTA+AGG | 0.343897 | 1_4:+48692153 | None:intergenic |
| AGATTCGTTGATACATTATC+AGG | 0.360747 | 1_4:+48693144 | None:intergenic |
| CTTCCAGAAATATCATTTGA+TGG | 0.363684 | 1_4:-48693536 | Msa0167030:intron |
| TGAGACTTTGCATTCATCTC+CGG | 0.373003 | 1_4:+48693775 | None:intergenic |
| TGAGACTTTGCATTCATCTC+CGG | 0.373003 | 1_4:+48698310 | None:intergenic |
| GGTTGTGGAAAATCATGATT+TGG | 0.381883 | 1_4:-48693178 | Msa0167030:CDS |
| AATGATGAAGAGCCTCTAAA+AGG | 0.383621 | 1_4:+48691985 | None:intergenic |
| ACAGCGATCTGGTCTTTATC+TGG | 0.385900 | 1_4:+48692762 | None:intergenic |
| GTAGAGCTCTGCTCTTTCTC+TGG | 0.387989 | 1_4:+48693207 | None:intergenic |
| ACATATCCCGTTCATCTTTG+AGG | 0.399307 | 1_4:+48692907 | None:intergenic |
| AAACAGTGCACACTGGATAA+TGG | 0.412705 | 1_4:-48694264 | Msa0167030:CDS |
| AAACAGTGCACACTGGATAA+TGG | 0.412705 | 1_4:-48698799 | Msa0167030:CDS |
| GTTGATATTGCTTGTGGTAG+TGG | 0.415196 | 1_4:-48693737 | Msa0167030:intron |
| GTTGATATTGCTTGTGGTAG+TGG | 0.415196 | 1_4:-48698272 | Msa0167030:CDS |
| AGGGTTTAATATTATGCATC+CGG | 0.421517 | 1_4:+48692826 | None:intergenic |
| ATGGAGTCTTGCAATTCTCT+GGG | 0.433444 | 1_4:+48693801 | None:intergenic |
| ATGGAGTCTTGCAATTCTCT+GGG | 0.433444 | 1_4:+48698336 | None:intergenic |
| ATTCAGGGAAGAAGCGGTTC+GGG | 0.436156 | 1_4:-48694379 | Msa0167030:intron |
| ATTCAGGGAAGAAGCGGTTC+GGG | 0.436156 | 1_4:-48698914 | None:intergenic |
| TCCTACTTCTTTGTTATCAC+CGG | 0.437184 | 1_4:-48692961 | Msa0167030:CDS |
| GATTCAGGGAAGAAGCGGTT+CGG | 0.441206 | 1_4:-48694380 | Msa0167030:intron |
| GATTCAGGGAAGAAGCGGTT+CGG | 0.441206 | 1_4:-48698915 | None:intergenic |
| TTTAGAGGCTCTTCATCATT+GGG | 0.442092 | 1_4:-48691982 | Msa0167030:CDS |
| GACCATGGGAGATCGCAATA+AGG | 0.444355 | 1_4:-48692934 | Msa0167030:CDS |
| CAGAAGAAGCAACCTGCTAC+TGG | 0.444849 | 1_4:-48692801 | Msa0167030:CDS |
| GGCACTCCTCAAAGATGAAC+GGG | 0.449784 | 1_4:-48692913 | Msa0167030:CDS |
| AGTGAGGTCAACGATGTTCA+TGG | 0.454444 | 1_4:-48693318 | Msa0167030:intron |
| GATCGCTGTCTCAGCATCCT+TGG | 0.454462 | 1_4:-48692748 | Msa0167030:CDS |
| GTCAATGTTGTTCATGGTAG+TGG | 0.459300 | 1_4:-48692867 | Msa0167030:CDS |
| GCAGGTTGCTTCTTCTGGTA+GGG | 0.464478 | 1_4:+48692807 | None:intergenic |
| GAGACTTTGCATTCATCTCC+GGG | 0.467675 | 1_4:+48693776 | None:intergenic |
| GAGACTTTGCATTCATCTCC+GGG | 0.467675 | 1_4:+48698311 | None:intergenic |
| CGATCTCCCATGGTCTTATC+CGG | 0.467896 | 1_4:+48692942 | None:intergenic |
| TTCTTCTCGCTTCGAACGAA+CGG | 0.468703 | 1_4:-48694906 | Msa0167030:CDS |
| GGTAGGGTCAATGTTGTTCA+TGG | 0.469284 | 1_4:-48692873 | Msa0167030:intron |
| GACACCCGTTCAATCACAAA+AGG | 0.469932 | 1_4:-48692694 | Msa0167030:CDS |
| TTGCATTCATCTCCGGGGAA+TGG | 0.473283 | 1_4:+48693782 | None:intergenic |
| TTGCATTCATCTCCGGGGAA+TGG | 0.473283 | 1_4:+48698317 | None:intergenic |
| ACGGCCTTTGAGGTAGAGCT+TGG | 0.476441 | 1_4:+48693608 | None:intergenic |
| ACGGCCTTTGAGGTAGAGCT+TGG | 0.476441 | 1_4:+48698143 | None:intergenic |
| GAACGGTTACATTATACGAT+TGG | 0.482529 | 1_4:-48694889 | Msa0167030:CDS |
| ATCAGAAACCGGTACTGATT+CGG | 0.485573 | 1_4:-48694039 | Msa0167030:CDS |
| ATCAGAAACCGGTACTGATT+CGG | 0.485573 | 1_4:-48698574 | Msa0167030:CDS |
| CTCGATGTAGGATGCTGCTT+CGG | 0.487404 | 1_4:+48693659 | None:intergenic |
| CTCGATGTAGGATGCTGCTT+CGG | 0.487404 | 1_4:+48698194 | None:intergenic |
| AGCAGGTTGCTTCTTCTGGT+AGG | 0.488235 | 1_4:+48692806 | None:intergenic |
| GTGTGAATGAATGCGATGTT+TGG | 0.488330 | 1_4:+48694980 | None:intergenic |
| CGAGAAGAAGAAGAAGGTGT+GGG | 0.490234 | 1_4:+48694920 | None:intergenic |
| GTCAACGATGTTCATGGTAG+TGG | 0.490994 | 1_4:-48693312 | Msa0167030:CDS |
| GAGCTCTACCGTGAAGGTTG+TGG | 0.495500 | 1_4:-48693193 | Msa0167030:CDS |
| TTATCAGGAACAACAGTATC+CGG | 0.501961 | 1_4:+48693572 | None:intergenic |
| TTATCAGGAACAACAGTATC+CGG | 0.501961 | 1_4:+48698107 | None:intergenic |
| TCTTTCTCTGGATTCTTGAG+AGG | 0.504491 | 1_4:+48693219 | None:intergenic |
| GGCCGTCGAAAATCATGATC+CGG | 0.505332 | 1_4:-48693591 | Msa0167030:CDS |
| GGCCGTCGAAAATCATGATC+CGG | 0.505332 | 1_4:-48698126 | Msa0167030:CDS |
| AGTCCTTAGTACTATGCAAC+CGG | 0.517646 | 1_4:+48693271 | None:intergenic |
| GAGGCTCTTCATCATTGGGC+AGG | 0.522623 | 1_4:-48691978 | Msa0167030:intron |
| TGCCTTATTGCGATCTCCCA+TGG | 0.525598 | 1_4:+48692932 | None:intergenic |
| CAGAAGAAGCAGCCTGCGTA+TGG | 0.526168 | 1_4:-48693246 | Msa0167030:CDS |
| ACCGGCCACTACGTCTAGTC+CGG | 0.527410 | 1_4:+48693289 | None:intergenic |
| AGGATGCTGAGACAGCGATC+TGG | 0.533376 | 1_4:+48692751 | None:intergenic |
| CGGTTACATTATACGATTGG+TGG | 0.540059 | 1_4:-48694886 | Msa0167030:CDS |
| GGAAATGACTGATGGAGGAC+TGG | 0.545081 | 1_4:-48692727 | Msa0167030:CDS |
| GACTTTAATATTATGCAACC+TGG | 0.548218 | 1_4:+48698232 | None:intergenic |
| AGACGCCGGAGATGGCTAAA+CGG | 0.549320 | 1_4:+48694834 | None:intergenic |
| GCGAGAAGAAGAAGAAGGTG+TGG | 0.549754 | 1_4:+48694919 | None:intergenic |
| TCAGGCAATACCGACGAAGT+AGG | 0.550175 | 1_4:+48693830 | None:intergenic |
| TCAGGCAATACCGACGAAGT+AGG | 0.550175 | 1_4:+48698365 | None:intergenic |
| GCATCCTTGGAAATGACTGA+TGG | 0.552045 | 1_4:-48692735 | Msa0167030:CDS |
| CCTGAATTTCTGTAATCTCA+CGG | 0.553835 | 1_4:+48692028 | None:intergenic |
| TGGCCGGTTGCATAGTACTA+AGG | 0.554205 | 1_4:-48693274 | Msa0167030:CDS |
| AAGTCTCAAAGAAGATGAGT+GGG | 0.555389 | 1_4:-48693760 | Msa0167030:CDS |
| AAGTCTCAAAGAAGATGAGT+GGG | 0.555389 | 1_4:-48698295 | Msa0167030:CDS |
| GTTAGAGAACAATCAGAAAC+CGG | 0.557595 | 1_4:-48694050 | Msa0167030:CDS |
| GTTAGAGAACAATCAGAAAC+CGG | 0.557595 | 1_4:-48698585 | Msa0167030:CDS |
| TTGGTTGAAGAGAAATAAGT+CGG | 0.557632 | 1_4:+48694999 | None:intergenic |
| AACCACCGTTTAGCCATCTC+CGG | 0.558688 | 1_4:-48694839 | Msa0167030:CDS |
| GTTGCAGGATCTCCAGTAGC+AGG | 0.559749 | 1_4:+48692789 | None:intergenic |
| TGTGGAAGAGACGCCGGAGA+TGG | 0.563212 | 1_4:+48694826 | None:intergenic |
| GGACTCTCTCTCACGCTGTA+CGG | 0.564022 | 1_4:+48695028 | None:intergenic |
| GCGGGAATAGACGTAGTGCC+CGG | 0.565247 | 1_4:-48692845 | Msa0167030:CDS |
| TCCGGTGATAACAAAGAAGT+AGG | 0.566020 | 1_4:+48692960 | None:intergenic |
| TTGAGAGGACCTCTCGATGT+AGG | 0.566402 | 1_4:+48698182 | None:intergenic |
| GAGAAGAAGAAGAAGGTGTG+GGG | 0.570479 | 1_4:+48694921 | None:intergenic |
| AATTGCAAGACTCCATTCCC+CGG | 0.573734 | 1_4:-48693794 | Msa0167030:CDS |
| AATTGCAAGACTCCATTCCC+CGG | 0.573734 | 1_4:-48698329 | Msa0167030:CDS |
| CTGTAAAATCTCCTCAAGGA+AGG | 0.576048 | 1_4:-48692512 | Msa0167030:CDS |
| TCTTCATCTGAACGCTTGAG+AGG | 0.576282 | 1_4:+48698167 | None:intergenic |
| AGTGGGGTTGATATTGCTTG+TGG | 0.577027 | 1_4:-48693743 | Msa0167030:CDS |
| AGTGGGGTTGATATTGCTTG+TGG | 0.577027 | 1_4:-48698278 | Msa0167030:CDS |
| GAATGTAAGTCACTCGAACA+AGG | 0.577107 | 1_4:-48692490 | Msa0167030:CDS |
| CAATACCGACGAAGTAGGAA+TGG | 0.577162 | 1_4:+48693835 | None:intergenic |
| CAATACCGACGAAGTAGGAA+TGG | 0.577162 | 1_4:+48698370 | None:intergenic |
| GGGTTTAATATTATGCATCC+GGG | 0.577350 | 1_4:+48692827 | None:intergenic |
| TTGAGAGGACCTCTCGATGT+AGG | 0.578821 | 1_4:+48693647 | None:intergenic |
| TGACTTACATTCCTTCCTTG+AGG | 0.583902 | 1_4:+48692501 | None:intergenic |
| AGCACTGACCGAATCAGTAC+CGG | 0.586199 | 1_4:+48694031 | None:intergenic |
| AGCACTGACCGAATCAGTAC+CGG | 0.586199 | 1_4:+48698566 | None:intergenic |
| AGAGAAATAAGTCGGAGGAG+AGG | 0.588519 | 1_4:+48695007 | None:intergenic |
| ATGTTGTTCATGGTAGTGGC+GGG | 0.588592 | 1_4:-48692863 | Msa0167030:CDS |
| ACGATGTTCATGGTAGTGGC+CGG | 0.588769 | 1_4:-48693308 | Msa0167030:CDS |
| ACTGCCAAATACCAACTCAC+TGG | 0.590965 | 1_4:-48690231 | Msa0167030:CDS |
| CTTCCAGAAATATTATCTGA+TGG | 0.594536 | 1_4:-48693123 | Msa0167030:intron |
| TCGAAGCGAGAAGAAGAAGA+AGG | 0.597596 | 1_4:+48694914 | None:intergenic |
| CATTAATAAACAGTGCACAC+TGG | 0.598333 | 1_4:-48694271 | Msa0167030:CDS |
| CATTAATAAACAGTGCACAC+TGG | 0.598333 | 1_4:-48698806 | Msa0167030:CDS |
| ACACCCGTTCAATCACAAAA+GGG | 0.599424 | 1_4:-48692693 | Msa0167030:CDS |
| AATGTAAGTCACTCGAACAA+GGG | 0.601122 | 1_4:-48692489 | Msa0167030:CDS |
| AGGCACTCCTCAAAGATGAA+CGG | 0.602783 | 1_4:-48692914 | Msa0167030:CDS |
| AATGTTGTTCATGGTAGTGG+CGG | 0.603017 | 1_4:-48692864 | Msa0167030:CDS |
| TGATTGCGCCAAAACTCTAA+GGG | 0.604798 | 1_4:+48692154 | None:intergenic |
| GTTATCACCGGATAAGACCA+TGG | 0.605592 | 1_4:-48692949 | Msa0167030:CDS |
| GTTTCCCTTGAGACTGTCGA+TGG | 0.607459 | 1_4:-48694318 | Msa0167030:CDS |
| GTTTCCCTTGAGACTGTCGA+TGG | 0.607459 | 1_4:-48698853 | Msa0167030:CDS |
| TCCTCCATCAGTCATTTCCA+AGG | 0.608505 | 1_4:+48692731 | None:intergenic |
| AGGTGTCGTCACCAGTGAGT+TGG | 0.611362 | 1_4:+48690220 | None:intergenic |
| ATATACCATCGACAGTCTCA+AGG | 0.611734 | 1_4:+48694313 | None:intergenic |
| ATATACCATCGACAGTCTCA+AGG | 0.611734 | 1_4:+48698848 | None:intergenic |
| TCCTTGGAAATGACTGATGG+AGG | 0.612865 | 1_4:-48692732 | Msa0167030:CDS |
| AAAGTCCATTCCTACTTCGT+CGG | 0.613142 | 1_4:-48698375 | Msa0167030:CDS |
| TCTTCATCTGAACACTTGAG+AGG | 0.613863 | 1_4:+48693632 | None:intergenic |
| TATCAAGGAACTTTCTCTGG+CGG | 0.614455 | 1_4:-48693984 | Msa0167030:intron |
| TATCAAGGAACTTTCTCTGG+CGG | 0.614455 | 1_4:-48698519 | Msa0167030:intron |
| AAAGTCCATTCCTACTTCGT+CGG | 0.616794 | 1_4:-48693840 | Msa0167030:CDS |
| GCATTCTCTCGTGACCAAAG+AGG | 0.619612 | 1_4:+48693386 | None:intergenic |
| GTTGTGATTCAGGGAAGAAG+CGG | 0.620242 | 1_4:-48694385 | Msa0167030:intron |
| GTTGTGATTCAGGGAAGAAG+CGG | 0.620242 | 1_4:-48698920 | None:intergenic |
| AGAGCCAAGCTCTACCTCAA+AGG | 0.621891 | 1_4:-48693612 | Msa0167030:CDS |
| AGAGCCAAGCTCTACCTCAA+AGG | 0.621891 | 1_4:-48698147 | Msa0167030:CDS |
| AGAGCAGAGCTCTACCGTGA+AGG | 0.623843 | 1_4:-48693199 | Msa0167030:CDS |
| AAAGTCTCAAAGAAGATGAG+TGG | 0.624361 | 1_4:-48693761 | Msa0167030:CDS |
| AAAGTCTCAAAGAAGATGAG+TGG | 0.624361 | 1_4:-48698296 | Msa0167030:CDS |
| TTATCACCGGATAAGACCAT+GGG | 0.624895 | 1_4:-48692948 | Msa0167030:CDS |
| TATTATCAAAAGATATGATG+AGG | 0.626070 | 1_4:-48694340 | Msa0167030:CDS |
| TATTATCAAAAGATATGATG+AGG | 0.626070 | 1_4:-48698875 | Msa0167030:CDS |
| TCTTCTGTAAAATCTCCTCA+AGG | 0.626237 | 1_4:-48692516 | Msa0167030:CDS |
| TTCGTCGGTATTGCCTGAAG+AGG | 0.626897 | 1_4:-48693825 | Msa0167030:CDS |
| TTCGTCGGTATTGCCTGAAG+AGG | 0.626897 | 1_4:-48698360 | Msa0167030:CDS |
| GTTGAAGAGAAATAAGTCGG+AGG | 0.627496 | 1_4:+48695002 | None:intergenic |
| TATACCATCGACAGTCTCAA+GGG | 0.636705 | 1_4:+48694314 | None:intergenic |
| TATACCATCGACAGTCTCAA+GGG | 0.636705 | 1_4:+48698849 | None:intergenic |
| CAATGACTCTGGAGAAACTG+TGG | 0.637102 | 1_4:+48692449 | None:intergenic |
| TGGCTCGTTAAATCATCTCA+AGG | 0.637214 | 1_4:-48694866 | Msa0167030:CDS |
| TTGAGAGGATCTCCATACGC+AGG | 0.638184 | 1_4:+48693234 | None:intergenic |
| GCCGGACTAGACGTAGTGGC+CGG | 0.638720 | 1_4:-48693290 | Msa0167030:CDS |
| TCAACAACCTATTTATAACA+TGG | 0.640146 | 1_4:-48692134 | Msa0167030:intron |
| AGAAGAAGAAGAAGGTGTGG+GGG | 0.640744 | 1_4:+48694922 | None:intergenic |
| GAGATTACAGAAATTCAGGA+AGG | 0.641599 | 1_4:-48692024 | Msa0167030:CDS |
| GGCGACAATTGAAACAGAAG+CGG | 0.644820 | 1_4:-48692571 | Msa0167030:CDS |
| TCACTTTGTGGAAGAGACGC+CGG | 0.644826 | 1_4:+48694820 | None:intergenic |
| TGGAGTCTTGCAATTCTCTG+GGG | 0.655923 | 1_4:+48693802 | None:intergenic |
| TGGAGTCTTGCAATTCTCTG+GGG | 0.655923 | 1_4:+48698337 | None:intergenic |
| CATCGCATTCATTCACACAA+TGG | 0.658461 | 1_4:-48694975 | Msa0167030:CDS |
| AAGCAGCATCCTACATCGAG+AGG | 0.662773 | 1_4:-48693656 | Msa0167030:CDS |
| AAGCAGCATCCTACATCGAG+AGG | 0.662773 | 1_4:-48698191 | Msa0167030:CDS |
| TCTCTCGTGACCAAAGAGGT+AGG | 0.664826 | 1_4:+48693390 | None:intergenic |
| CGCCGGAGATGGCTAAACGG+TGG | 0.689679 | 1_4:+48694837 | None:intergenic |
| AGACTTTGCATTCATCTCCG+GGG | 0.700085 | 1_4:+48693777 | None:intergenic |
| AGACTTTGCATTCATCTCCG+GGG | 0.700085 | 1_4:+48698312 | None:intergenic |
| TTGCGCCAAAACTCTAAGGG+AGG | 0.703796 | 1_4:+48692157 | None:intergenic |
| AGTGGCCGGACTAGACGTAG+TGG | 0.713698 | 1_4:-48693294 | Msa0167030:CDS |
| GGGGTGCAATTAGAAGAACT+GGG | 0.727442 | 1_4:+48694941 | None:intergenic |
| AGTCTCAAAGAAGATGAGTG+GGG | 0.750570 | 1_4:-48693759 | Msa0167030:CDS |
| AGTCTCAAAGAAGATGAGTG+GGG | 0.750570 | 1_4:-48698294 | Msa0167030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAGTAATATTGAAT+TGG | + | chr1_4:48693340-48693359 | None:intergenic | 10.0% |
| !!! | GTTTTAATAAGATTATTTAA+GGG | + | chr1_4:48693451-48693470 | None:intergenic | 10.0% |
| !!! | AGTTTTAATAAGATTATTTA+AGG | + | chr1_4:48693452-48693471 | None:intergenic | 10.0% |
| !!! | AGTTTTAAAATACAATAAAA+AGG | + | chr1_4:48693709-48693728 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTGACAAAAA+AGG | - | chr1_4:48694026-48694045 | Msa0167030:CDS | 10.0% |
| !! | ATAGTAAAAAAAAAATCTAA+AGG | + | chr1_4:48697387-48697406 | None:intergenic | 10.0% |
| !! | TGGAAAAATAAATAAATTAA+GGG | + | chr1_4:48698154-48698173 | None:intergenic | 10.0% |
| !! | TTGGAAAAATAAATAAATTA+AGG | + | chr1_4:48698155-48698174 | None:intergenic | 10.0% |
| !!! | ATTTTCAAGAGTTTTTTATT+TGG | - | chr1_4:48690483-48690502 | Msa0167030:intron | 15.0% |
| !!! | CTTATTTCTTTTATTCAATT+TGG | + | chr1_4:48691730-48691749 | None:intergenic | 15.0% |
| !! | TGAATAAAAGAAATAAGTTA+AGG | - | chr1_4:48691733-48691752 | Msa0167030:intron | 15.0% |
| !! | GAATAAAAGAAATAAGTTAA+GGG | - | chr1_4:48691734-48691753 | Msa0167030:intron | 15.0% |
| !!! | ATTTTAGTTCAAATTTATGT+GGG | - | chr1_4:48692542-48692561 | Msa0167030:CDS | 15.0% |
| !!! | CTAATTGATTTTGATTTAAA+TGG | - | chr1_4:48692658-48692677 | Msa0167030:intron | 15.0% |
| !!! | TTAATAGAGGTTTTTTTTAA+GGG | + | chr1_4:48692837-48692856 | None:intergenic | 15.0% |
| !!! | ATTAATAGAGGTTTTTTTTA+AGG | + | chr1_4:48692838-48692857 | None:intergenic | 15.0% |
| !! | ACTTATATAAGAATTAATAG+AGG | + | chr1_4:48692850-48692869 | None:intergenic | 15.0% |
| !! | ATACAATAAAAAGGATAATT+TGG | + | chr1_4:48693700-48693719 | None:intergenic | 15.0% |
| !!! | TAATTATCTAAAATGAGAAA+GGG | + | chr1_4:48693738-48693757 | None:intergenic | 15.0% |
| !!! | ATAATTATCTAAAATGAGAA+AGG | + | chr1_4:48693739-48693758 | None:intergenic | 15.0% |
| !! | ACTATAAACTAAAACTTTAT+TGG | - | chr1_4:48693974-48693993 | Msa0167030:intron | 15.0% |
| !!! | TTTTTTTTTCTTAGATAAAG+TGG | - | chr1_4:48694068-48694087 | Msa0167030:CDS | 15.0% |
| !!! | TTTTTTTTCTTAGATAAAGT+GGG | - | chr1_4:48694069-48694088 | Msa0167030:CDS | 15.0% |
| !!! | ATAGTTTTTGTTAATTTCAT+CGG | - | chr1_4:48694512-48694531 | Msa0167030:intron | 15.0% |
| !!! | ATTTTCAAGAGTTTTTTATT+TGG | - | chr1_4:48690483-48690502 | Msa0167030:intron | 15.0% |
| !!! | TTTTTTCTTATAACATCTTT+TGG | + | chr1_4:48696535-48696554 | None:intergenic | 15.0% |
| !! | AAAGATGTTATAAGAAAAAA+AGG | - | chr1_4:48696535-48696554 | Msa0167030:intron | 15.0% |
| !! | AAGATGTTATAAGAAAAAAA+GGG | - | chr1_4:48696536-48696555 | Msa0167030:intron | 15.0% |
| !! | TGTAAAAAAAAAACAATGAT+TGG | + | chr1_4:48696736-48696755 | None:intergenic | 15.0% |
| !!! | TTTCTTTATGTTATTTTTGA+AGG | - | chr1_4:48697349-48697368 | Msa0167030:intron | 15.0% |
| !!! | TCATCATATCTTTTGATAAT+AGG | + | chr1_4:48690254-48690273 | None:intergenic | 20.0% |
| !! | TATTATCAAAAGATATGATG+AGG | - | chr1_4:48690253-48690272 | Msa0167030:intron | 20.0% |
| !!! | ATGGTATATATGTTTTGATT+AGG | - | chr1_4:48690294-48690313 | Msa0167030:intron | 20.0% |
| !!! | TGGTATATATGTTTTGATTA+GGG | - | chr1_4:48690295-48690314 | Msa0167030:intron | 20.0% |
| !! | AAAAAAACAAAAATCCATCA+GGG | + | chr1_4:48690444-48690463 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAAAATCCATC+AGG | + | chr1_4:48690445-48690464 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTCTTCTATTTCA+TGG | - | chr1_4:48690456-48690475 | Msa0167030:intron | 20.0% |
| !!! | AATGAATTTGCATTTTATCA+AGG | - | chr1_4:48690594-48690613 | Msa0167030:intron | 20.0% |
| !!! | GTTTTATTAATTTTTGTAGC+AGG | - | chr1_4:48690724-48690743 | Msa0167030:intron | 20.0% |
| !! | AAAGTAAATAAATCAAGTGT+TGG | - | chr1_4:48691586-48691605 | Msa0167030:intron | 20.0% |
| !!! | TCAATTTAGCCAATTTTTTA+AGG | - | chr1_4:48691766-48691785 | Msa0167030:intron | 20.0% |
| !!! | CAATTTAGCCAATTTTTTAA+GGG | - | chr1_4:48691767-48691786 | Msa0167030:intron | 20.0% |
| !! | TTATAGTCATGATTTAGTTA+AGG | - | chr1_4:48691931-48691950 | Msa0167030:intron | 20.0% |
| !!! | TATTTTTTTTTTTGAATGGC+TGG | - | chr1_4:48692067-48692086 | Msa0167030:intron | 20.0% |
| !! | ACAAAATCAAAGCAATTAAT+TGG | - | chr1_4:48692118-48692137 | Msa0167030:intron | 20.0% |
| !!! | TTATGGATTTTTTTTTGGAA+CGG | + | chr1_4:48692499-48692518 | None:intergenic | 20.0% |
| !! | TTCCAAAAAAAAATCCATAA+TGG | - | chr1_4:48692499-48692518 | Msa0167030:CDS | 20.0% |
| !!! | AACCATTATGGATTTTTTTT+TGG | + | chr1_4:48692504-48692523 | None:intergenic | 20.0% |
| !! | CACATAAATTTGAACTAAAA+TGG | + | chr1_4:48692543-48692562 | None:intergenic | 20.0% |
| !!! | CATTTTAGTTCAAATTTATG+TGG | - | chr1_4:48692541-48692560 | Msa0167030:CDS | 20.0% |
| !!! | AATTCTAATGACCATTTTAT+AGG | - | chr1_4:48692790-48692809 | Msa0167030:CDS | 20.0% |
| !! | TTAATTCTTATATAAGTCGA+TGG | - | chr1_4:48692853-48692872 | Msa0167030:CDS | 20.0% |
| !! | TTAAGGAAACTAAAATTAGT+AGG | - | chr1_4:48693250-48693269 | Msa0167030:CDS | 20.0% |
| !! | TACTAATTTACATATGAGTT+TGG | - | chr1_4:48693514-48693533 | Msa0167030:intron | 20.0% |
| !!! | GATTTTGATAGAATTGATTT+TGG | - | chr1_4:48693556-48693575 | Msa0167030:CDS | 20.0% |
| !!! | TTTTTTAAGGTTAATAAGTG+GGG | + | chr1_4:48693890-48693909 | None:intergenic | 20.0% |
| !!! | CTTTTTTAAGGTTAATAAGT+GGG | + | chr1_4:48693891-48693910 | None:intergenic | 20.0% |
| !!! | GTTCACAAATTGTTTTTAAA+AGG | - | chr1_4:48693996-48694015 | Msa0167030:CDS | 20.0% |
| !! | GTTAACACTAAACTATAAAT+TGG | - | chr1_4:48694573-48694592 | Msa0167030:intron | 20.0% |
| !! | AAATATAAAAACAGTTTCTG+TGG | - | chr1_4:48694684-48694703 | Msa0167030:intron | 20.0% |
| !!! | TCATCATATCTTTTGATAAT+AGG | + | chr1_4:48690254-48690273 | None:intergenic | 20.0% |
| !! | TATTATCAAAAGATATGATG+AGG | - | chr1_4:48690253-48690272 | Msa0167030:intron | 20.0% |
| !!! | ATGGTATATATGTTTTGATT+AGG | - | chr1_4:48690294-48690313 | Msa0167030:intron | 20.0% |
| !!! | TGGTATATATGTTTTGATTA+GGG | - | chr1_4:48690295-48690314 | Msa0167030:intron | 20.0% |
| !! | AAAAAAACAAAAATCCATCA+GGG | + | chr1_4:48690444-48690463 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAAAATCCATC+AGG | + | chr1_4:48690445-48690464 | None:intergenic | 20.0% |
| !!! | GTTTTTTTTCTTCTATTTCA+TGG | - | chr1_4:48690456-48690475 | Msa0167030:intron | 20.0% |
| !!! | AATGAATTTGCATTTTATCA+AGG | - | chr1_4:48690594-48690613 | Msa0167030:intron | 20.0% |
| !!! | GTTTTATTAATTTTTGTAGC+AGG | - | chr1_4:48690724-48690743 | Msa0167030:intron | 20.0% |
| !!! | GGTTTAATAATTTTTCTCTT+AGG | + | chr1_4:48696588-48696607 | None:intergenic | 20.0% |
| !! | GAGTGTATATATTATCAATT+AGG | + | chr1_4:48696804-48696823 | None:intergenic | 20.0% |
| !! | TTTACTCTATTCTTTATGTT+TGG | - | chr1_4:48696922-48696941 | Msa0167030:intron | 20.0% |
| !! | TTACTCTATTCTTTATGTTT+GGG | - | chr1_4:48696923-48696942 | Msa0167030:intron | 20.0% |
| !!! | GAGAATTTTTTAAGTTAGTT+GGG | + | chr1_4:48697270-48697289 | None:intergenic | 20.0% |
| !!! | TGAGAATTTTTTAAGTTAGT+TGG | + | chr1_4:48697271-48697290 | None:intergenic | 20.0% |
| !! | AAAAAAAAATCTAAAGGAAC+TGG | + | chr1_4:48697381-48697400 | None:intergenic | 20.0% |
| !! | CTATTCCAAAGATTAAATAA+TGG | + | chr1_4:48697505-48697524 | None:intergenic | 20.0% |
| !!! | AATAGATGATCTTCTAATTT+TGG | - | chr1_4:48697520-48697539 | Msa0167030:intron | 20.0% |
| !!! | CAGATTAGATAAATGTATTT+TGG | - | chr1_4:48697949-48697968 | Msa0167030:intron | 20.0% |
| !! | GACAGAAAAATAAATCAAAT+TGG | + | chr1_4:48698308-48698327 | None:intergenic | 20.0% |
| !!! | ATGATTCGTTGTTTTTTATT+AGG | - | chr1_4:48698453-48698472 | Msa0167030:intron | 20.0% |
| !! | ATAACTGTAAACCTTATAAA+CGG | + | chr1_4:48698713-48698732 | None:intergenic | 20.0% |
| !!! | ATATCTTTTGATAATAGGAG+CGG | + | chr1_4:48690249-48690268 | None:intergenic | 25.0% |
| !!! | GGTATATATGTTTTGATTAG+GGG | - | chr1_4:48690296-48690315 | Msa0167030:intron | 25.0% |
| !! | TTCATAAGTGTCAATGTTTT+TGG | - | chr1_4:48690372-48690391 | Msa0167030:intron | 25.0% |
| !! | TTGCAAGATATTGTTGATAA+TGG | - | chr1_4:48690404-48690423 | Msa0167030:intron | 25.0% |
| ! | AAAAAACAAAAATCCATCAG+GGG | + | chr1_4:48690443-48690462 | None:intergenic | 25.0% |
| ! | TTACCATCAAATGATATTTC+TGG | + | chr1_4:48691063-48691082 | None:intergenic | 25.0% |
| ! | TTACCATCAGATAATATTTC+TGG | + | chr1_4:48691476-48691495 | None:intergenic | 25.0% |
| !! | TACTTTCTTCATGTTCTTTT+AGG | + | chr1_4:48691572-48691591 | None:intergenic | 25.0% |
| ! | TGATTAACAACAATGAGTTA+AGG | - | chr1_4:48691673-48691692 | Msa0167030:intron | 25.0% |
| ! | GATTAACAACAATGAGTTAA+GGG | - | chr1_4:48691674-48691693 | Msa0167030:intron | 25.0% |
| ! | TTGCGATAGTTAAGATTTAT+AGG | - | chr1_4:48691703-48691722 | Msa0167030:intron | 25.0% |
| !! | TAATGAAGGTTATGTTTTAC+TGG | - | chr1_4:48692090-48692109 | Msa0167030:intron | 25.0% |
| ! | AATAGTGTATGCAATTAAGT+TGG | + | chr1_4:48692454-48692473 | None:intergenic | 25.0% |
| ! | ACGTTTCATAATAACCATTA+TGG | + | chr1_4:48692516-48692535 | None:intergenic | 25.0% |
| ! | ACAAAAAGGAGAATATTGTA+CGG | + | chr1_4:48692568-48692587 | None:intergenic | 25.0% |
| !! | TTTTGATGAAAAAATGCTTC+AGG | - | chr1_4:48692736-48692755 | Msa0167030:CDS | 25.0% |
| ! | ATTTACATATGAGTTTGGTT+TGG | - | chr1_4:48693519-48693538 | Msa0167030:intron | 25.0% |
| !!! | CCTTTTTTAAGGTTAATAAG+TGG | + | chr1_4:48693892-48693911 | None:intergenic | 25.0% |
| ! | CCACTTATTAACCTTAAAAA+AGG | - | chr1_4:48693889-48693908 | Msa0167030:intron | 25.0% |
| ! | TTCTGATTCAACAAGATTAT+TGG | + | chr1_4:48694398-48694417 | None:intergenic | 25.0% |
| ! | AATCTTGTTGAATCAGAAAT+TGG | - | chr1_4:48694400-48694419 | Msa0167030:intron | 25.0% |
| !!! | ACTATTAAGTATTGAAAGTC+AGG | + | chr1_4:48694497-48694516 | None:intergenic | 25.0% |
| !!! | ATCGGTTTTGAATTTATGTT+TGG | - | chr1_4:48694530-48694549 | Msa0167030:intron | 25.0% |
| ! | ACATTTAATGTTGTGATTCA+GGG | - | chr1_4:48694734-48694753 | Msa0167030:intron | 25.0% |
| !!! | ATATCTTTTGATAATAGGAG+CGG | + | chr1_4:48690249-48690268 | None:intergenic | 25.0% |
| !!! | GGTATATATGTTTTGATTAG+GGG | - | chr1_4:48690296-48690315 | Msa0167030:intron | 25.0% |
| !! | TTCATAAGTGTCAATGTTTT+TGG | - | chr1_4:48690372-48690391 | Msa0167030:intron | 25.0% |
| !! | TTGCAAGATATTGTTGATAA+TGG | - | chr1_4:48690404-48690423 | Msa0167030:intron | 25.0% |
| ! | AAAAAACAAAAATCCATCAG+GGG | + | chr1_4:48690443-48690462 | None:intergenic | 25.0% |
| ! | TTACCATCAAATGATATTTC+TGG | + | chr1_4:48691063-48691082 | None:intergenic | 25.0% |
| ! | TTACCATCAGATAATATTTC+TGG | + | chr1_4:48691476-48691495 | None:intergenic | 25.0% |
| ! | TATTAAGATATAGAGACTGT+AGG | + | chr1_4:48696113-48696132 | None:intergenic | 25.0% |
| ! | CTTCATGAATAAACAATGAT+TGG | + | chr1_4:48696766-48696785 | None:intergenic | 25.0% |
| ! | AAAAATGCTAACAATAGCAT+TGG | + | chr1_4:48696874-48696893 | None:intergenic | 25.0% |
| !! | ATTGTTAGCATTTTTGTACA+TGG | - | chr1_4:48696879-48696898 | Msa0167030:intron | 25.0% |
| !!! | TTATGTTTGGGTTATTTTGT+AGG | - | chr1_4:48696935-48696954 | Msa0167030:intron | 25.0% |
| ! | TCAACAACCTATTTATAACA+TGG | - | chr1_4:48696994-48697013 | Msa0167030:intron | 25.0% |
| ! | TCACATACCATGTTATAAAT+AGG | + | chr1_4:48697004-48697023 | None:intergenic | 25.0% |
| ! | AGAAACATTCTAAATAAGCT+GGG | + | chr1_4:48697334-48697353 | None:intergenic | 25.0% |
| ! | AAGAAACATTCTAAATAAGC+TGG | + | chr1_4:48697335-48697354 | None:intergenic | 25.0% |
| !! | TTTGTTATGGTTATTGCTAT+TGG | - | chr1_4:48697416-48697435 | Msa0167030:intron | 25.0% |
| ! | TGGTAATAGTAATTGTTTAC+TGG | - | chr1_4:48697436-48697455 | Msa0167030:intron | 25.0% |
| ! | GGTAATAGTAATTGTTTACT+GGG | - | chr1_4:48697437-48697456 | Msa0167030:intron | 25.0% |
| !!! | TCTAATTTTGGAATGATACT+TGG | - | chr1_4:48697532-48697551 | Msa0167030:intron | 25.0% |
| ! | GACAATTACTATTCTAACAT+TGG | + | chr1_4:48697696-48697715 | None:intergenic | 25.0% |
| !! | TAATTAACTGGCTTCAATAT+TGG | - | chr1_4:48697770-48697789 | Msa0167030:intron | 25.0% |
| !!! | AATAACGACTGATTTTTGAT+GGG | + | chr1_4:48697993-48698012 | None:intergenic | 25.0% |
| ! | AAAAATAAATCAAATTGGCG+TGG | + | chr1_4:48698303-48698322 | None:intergenic | 25.0% |
| ! | ACTTACATAACACAACAATT+CGG | - | chr1_4:48698520-48698539 | Msa0167030:CDS | 25.0% |
| ! | AATGTCTTGATCAAATTAAG+AGG | - | chr1_4:48698676-48698695 | Msa0167030:intron | 25.0% |
| ! | TAACTGTAAACCTTATAAAC+GGG | + | chr1_4:48698712-48698731 | None:intergenic | 25.0% |
| ACACTTATGAATACAAACCT+GGG | + | chr1_4:48690363-48690382 | None:intergenic | 30.0% | |
| !!! | ATAAGTGTCAATGTTTTTGG+TGG | - | chr1_4:48690375-48690394 | Msa0167030:intron | 30.0% |
| !!! | TATTTGGCTTTTCTGAAAAC+TGG | - | chr1_4:48690499-48690518 | Msa0167030:intron | 30.0% |
| !!! | ATTTGGCTTTTCTGAAAACT+GGG | - | chr1_4:48690500-48690519 | Msa0167030:intron | 30.0% |
| ! | TTTTATCAAGGAACTTTCTC+TGG | - | chr1_4:48690606-48690625 | Msa0167030:intron | 30.0% |
| ! | ATTAATTTTTGTAGCAGGTG+TGG | - | chr1_4:48690729-48690748 | Msa0167030:intron | 30.0% |
| GACTTTAATATTATGCAACC+TGG | + | chr1_4:48690899-48690918 | None:intergenic | 30.0% | |
| CTTCCAGAAATATCATTTGA+TGG | - | chr1_4:48691057-48691076 | Msa0167030:intron | 30.0% | |
| TACTAAGATATAGAGACTGT+AGG | + | chr1_4:48691148-48691167 | None:intergenic | 30.0% | |
| ACATATCTTGATCATCTTCA+AGG | + | chr1_4:48691244-48691263 | None:intergenic | 30.0% | |
| TATGTCAATTAAGATGAGTG+AGG | - | chr1_4:48691259-48691278 | Msa0167030:intron | 30.0% | |
| AGATTCGTTGATACATTATC+AGG | + | chr1_4:48691452-48691471 | None:intergenic | 30.0% | |
| CTTCCAGAAATATTATCTGA+TGG | - | chr1_4:48691470-48691489 | Msa0167030:intron | 30.0% | |
| AAATAGAGATCGTTGGATAA+GGG | + | chr1_4:48691639-48691658 | None:intergenic | 30.0% | |
| AAAATAGAGATCGTTGGATA+AGG | + | chr1_4:48691640-48691659 | None:intergenic | 30.0% | |
| AATTGGCTAAATTGATCTGT+CGG | + | chr1_4:48691761-48691780 | None:intergenic | 30.0% | |
| ACTTGAAAAATATGAGCTTC+CGG | + | chr1_4:48691794-48691813 | None:intergenic | 30.0% | |
| TAGGAATAGGGAAATCTTTA+AGG | + | chr1_4:48691852-48691871 | None:intergenic | 30.0% | |
| !! | AGAAAGATGCTTTAGGAATA+GGG | + | chr1_4:48691864-48691883 | None:intergenic | 30.0% |
| !! | AAGAAAGATGCTTTAGGAAT+AGG | + | chr1_4:48691865-48691884 | None:intergenic | 30.0% |
| TGGTCTCAGGTTAAAATATT+GGG | - | chr1_4:48691892-48691911 | Msa0167030:intron | 30.0% | |
| AGGTTAAAATATTGGGAAGA+AGG | - | chr1_4:48691899-48691918 | Msa0167030:intron | 30.0% | |
| TGATTTAGTTAAGGCTACAT+TGG | - | chr1_4:48691940-48691959 | Msa0167030:intron | 30.0% | |
| ! | GAAGAGTTTAGAAGTTTTTG+TGG | - | chr1_4:48691994-48692013 | Msa0167030:CDS | 30.0% |
| ATAACCTTCATTACCAACAA+AGG | + | chr1_4:48692044-48692063 | None:intergenic | 30.0% | |
| AATAAAATGAACAGCCAGTT+CGG | + | chr1_4:48692258-48692277 | None:intergenic | 30.0% | |
| ! | TTGAAATTGCTGTTCTAACT+AGG | + | chr1_4:48692405-48692424 | None:intergenic | 30.0% |
| TTGGAACATGACTAAAAACA+TGG | + | chr1_4:48692435-48692454 | None:intergenic | 30.0% | |
| TTGTGTCAACTTTCATGTAA+AGG | + | chr1_4:48692611-48692630 | None:intergenic | 30.0% | |
| TCGATGGTGAAATATACAAT+AGG | - | chr1_4:48692869-48692888 | Msa0167030:CDS | 30.0% | |
| AATATACAATAGGTGTGCAT+TGG | - | chr1_4:48692879-48692898 | Msa0167030:intron | 30.0% | |
| GCTTATAAGTATAACCCAAA+GGG | + | chr1_4:48692933-48692952 | None:intergenic | 30.0% | |
| TGCTTATAAGTATAACCCAA+AGG | + | chr1_4:48692934-48692953 | None:intergenic | 30.0% | |
| AAACAAAACTGATGCAGAAA+GGG | + | chr1_4:48693073-48693092 | None:intergenic | 30.0% | |
| AAAACAAAACTGATGCAGAA+AGG | + | chr1_4:48693074-48693093 | None:intergenic | 30.0% | |
| ! | TCAGATTTTCCATGTTTACA+TGG | - | chr1_4:48693132-48693151 | Msa0167030:CDS | 30.0% |
| CCACTAAAGGACAAAAAAAA+CGG | - | chr1_4:48693193-48693212 | Msa0167030:CDS | 30.0% | |
| ! | TAACAAGTCGATACTTGTTA+AGG | - | chr1_4:48693233-48693252 | Msa0167030:CDS | 30.0% |
| TCCTCTTAATCAATGTCATA+AGG | - | chr1_4:48693360-48693379 | Msa0167030:intron | 30.0% | |
| ! | TCCTTATGACATTGATTAAG+AGG | + | chr1_4:48693364-48693383 | None:intergenic | 30.0% |
| GATTATTTAAGGGAATTTCG+TGG | + | chr1_4:48693441-48693460 | None:intergenic | 30.0% | |
| !!! | GCAAGAATTCACCTTTTTTA+AGG | + | chr1_4:48693903-48693922 | None:intergenic | 30.0% |
| TTGGTTGAAGAGAAATAAGT+CGG | + | chr1_4:48694132-48694151 | None:intergenic | 30.0% | |
| GTTACTTGAGTTAATCGTAT+AGG | - | chr1_4:48694424-48694443 | Msa0167030:intron | 30.0% | |
| !! | AAGTATTGAAAGTCAGGTTT+GGG | + | chr1_4:48694491-48694510 | None:intergenic | 30.0% |
| !! | TAAGTATTGAAAGTCAGGTT+TGG | + | chr1_4:48694492-48694511 | None:intergenic | 30.0% |
| CACATTTAATGTTGTGATTC+AGG | - | chr1_4:48694733-48694752 | Msa0167030:intron | 30.0% | |
| ACACTTATGAATACAAACCT+GGG | + | chr1_4:48690363-48690382 | None:intergenic | 30.0% | |
| !!! | ATAAGTGTCAATGTTTTTGG+TGG | - | chr1_4:48690375-48690394 | Msa0167030:intron | 30.0% |
| !!! | TATTTGGCTTTTCTGAAAAC+TGG | - | chr1_4:48690499-48690518 | Msa0167030:intron | 30.0% |
| !!! | ATTTGGCTTTTCTGAAAACT+GGG | - | chr1_4:48690500-48690519 | Msa0167030:intron | 30.0% |
| ! | TTTTATCAAGGAACTTTCTC+TGG | - | chr1_4:48690606-48690625 | Msa0167030:intron | 30.0% |
| ! | ATTAATTTTTGTAGCAGGTG+AGG | - | chr1_4:48690729-48690748 | Msa0167030:intron | 30.0% |
| GACTTTAATATTATGCAACC+TGG | + | chr1_4:48690899-48690918 | None:intergenic | 30.0% | |
| CTTCCAGAAATATCATTTGA+TGG | - | chr1_4:48691057-48691076 | Msa0167030:intron | 30.0% | |
| TACTAAGATATAGAGACTGT+AGG | + | chr1_4:48691148-48691167 | None:intergenic | 30.0% | |
| ACATATCTTGTTCATCTTCA+AGG | + | chr1_4:48695779-48695798 | None:intergenic | 30.0% | |
| TATGTCAATTAAGATGAGTG+AGG | - | chr1_4:48691259-48691278 | Msa0167030:intron | 30.0% | |
| AGATTCGTTGATACATTATC+AGG | + | chr1_4:48691452-48691471 | None:intergenic | 30.0% | |
| CTTCCAGAAATATTATCTGA+TGG | - | chr1_4:48691470-48691489 | Msa0167030:intron | 30.0% | |
| AGGGTTTAATATTATGCATC+CGG | + | chr1_4:48696305-48696324 | None:intergenic | 30.0% | |
| !!! | TGAAAAGGTTTTGGAAATTC+TGG | + | chr1_4:48696505-48696524 | None:intergenic | 30.0% |
| !!! | TCTTTTGGTTTTTGCTGAAA+AGG | + | chr1_4:48696520-48696539 | None:intergenic | 30.0% |
| ATTGGAAAATTTACCAGATC+TGG | + | chr1_4:48696718-48696737 | None:intergenic | 30.0% | |
| TAGATTGTAAATCTTCCAGT+AGG | + | chr1_4:48697039-48697058 | None:intergenic | 30.0% | |
| ! | TCTTTGATATCACCTTTTAG+AGG | - | chr1_4:48697131-48697150 | Msa0167030:intron | 30.0% |
| AGAGATACTTACGAAAAACA+AGG | + | chr1_4:48697246-48697265 | None:intergenic | 30.0% | |
| GAAACATTCTAAATAAGCTG+GGG | + | chr1_4:48697333-48697352 | None:intergenic | 30.0% | |
| !! | CTATTTGATCAGCTTTGTTA+TGG | - | chr1_4:48697403-48697422 | Msa0167030:intron | 30.0% |
| ! | CAAAGATTAAATAATGGAGC+CGG | + | chr1_4:48697499-48697518 | None:intergenic | 30.0% |
| TACAAGTACAACAGCAAAAT+CGG | + | chr1_4:48697581-48697600 | None:intergenic | 30.0% | |
| GCAATATATGGGTAATTAAC+TGG | - | chr1_4:48697758-48697777 | Msa0167030:intron | 30.0% | |
| !! | CAATAACGACTGATTTTTGA+TGG | + | chr1_4:48697994-48698013 | None:intergenic | 30.0% |
| AAAACAAAGACAGATGGAAT+TGG | + | chr1_4:48698018-48698037 | None:intergenic | 30.0% | |
| GAAAAGAAAACAAAGACAGA+TGG | + | chr1_4:48698024-48698043 | None:intergenic | 30.0% | |
| !!! | CTTTTCACATTGTTTCTATG+TGG | - | chr1_4:48698038-48698057 | Msa0167030:intron | 30.0% |
| !! | ACATTGTTTCTATGTGGTTT+CGG | - | chr1_4:48698044-48698063 | Msa0167030:intron | 30.0% |
| ! | ATTTGAAGTGTAACTCTGTA+AGG | + | chr1_4:48698109-48698128 | None:intergenic | 30.0% |
| TTACAGAGTTACACTTCAAA+TGG | - | chr1_4:48698108-48698127 | Msa0167030:CDS | 30.0% | |
| ATTGTAATATCAGTGATAGC+AGG | + | chr1_4:48698186-48698205 | None:intergenic | 30.0% | |
| ATATACTCAAAGAAAGGTGA+TGG | + | chr1_4:48698275-48698294 | None:intergenic | 30.0% | |
| GTTTGGATATACTCAAAGAA+AGG | + | chr1_4:48698281-48698300 | None:intergenic | 30.0% | |
| ! | ACTTGTCTATGAAGTTTGTT+TGG | - | chr1_4:48698381-48698400 | Msa0167030:CDS | 30.0% |
| ! | GAAGAAATCAAAACAGCTTT+TGG | - | chr1_4:48698601-48698620 | Msa0167030:CDS | 30.0% |
| TCAAATTAAGAGGATCTCAA+TGG | - | chr1_4:48698686-48698705 | Msa0167030:intron | 30.0% | |
| CATTAATAAACAGTGCACAC+TGG | - | chr1_4:48690322-48690341 | Msa0167030:intron | 35.0% | |
| CACTTATGAATACAAACCTG+GGG | + | chr1_4:48690362-48690381 | None:intergenic | 35.0% | |
| GACACTTATGAATACAAACC+TGG | + | chr1_4:48690364-48690383 | None:intergenic | 35.0% | |
| GTTAGAGAACAATCAGAAAC+CGG | - | chr1_4:48690543-48690562 | Msa0167030:intron | 35.0% | |
| GGCGGTAAATATTTCGATAA+TGG | - | chr1_4:48690627-48690646 | Msa0167030:intron | 35.0% | |
| AAAGTCTCAAAGAAGATGAG+TGG | - | chr1_4:48690832-48690851 | Msa0167030:intron | 35.0% | |
| AAGTCTCAAAGAAGATGAGT+GGG | - | chr1_4:48690833-48690852 | Msa0167030:intron | 35.0% | |
| GTAAAAATAGACGTAGTACC+AGG | - | chr1_4:48690878-48690897 | Msa0167030:intron | 35.0% | |
| TTATCAGGAACAACAGTATC+CGG | + | chr1_4:48691024-48691043 | None:intergenic | 35.0% | |
| !! | AGATTTGCTGGTACATTATC+AGG | + | chr1_4:48691039-48691058 | None:intergenic | 35.0% |
| !! | GATATTTCTGGAAGATTTGC+TGG | + | chr1_4:48691051-48691070 | None:intergenic | 35.0% |
| GATATAGAGACTGTAGGTAT+AGG | + | chr1_4:48691142-48691161 | None:intergenic | 35.0% | |
| TTTAATTGTTGTCGCAGCTT+CGG | - | chr1_4:48691169-48691188 | Msa0167030:intron | 35.0% | |
| AAATTCTGTTCCTACCTCTT+TGG | - | chr1_4:48691193-48691212 | Msa0167030:intron | 35.0% | |
| ! | ATGATTTTCCACAACCTTCA+AGG | + | chr1_4:48691411-48691430 | None:intergenic | 35.0% |
| GGTTGTGGAAAATCATGATT+TGG | - | chr1_4:48691415-48691434 | Msa0167030:intron | 35.0% | |
| TGATACATTATCAGGAACAG+CGG | + | chr1_4:48691444-48691463 | None:intergenic | 35.0% | |
| !! | TCCAACGATCTCTATTTTGA+AGG | - | chr1_4:48691642-48691661 | Msa0167030:intron | 35.0% |
| !! | CCAACGATCTCTATTTTGAA+GGG | - | chr1_4:48691643-48691662 | Msa0167030:intron | 35.0% |
| ! | CTCATTGTTGTTAATCAACG+TGG | + | chr1_4:48691670-48691689 | None:intergenic | 35.0% |
| !!! | TAGCCAATTTTTTAAGGGAC+CGG | - | chr1_4:48691772-48691791 | Msa0167030:intron | 35.0% |
| !!! | GCTCATATTTTTCAAGTCCA+TGG | - | chr1_4:48691797-48691816 | Msa0167030:intron | 35.0% |
| !!! | TTTTTCAAGTCCATGGCAAA+CGG | - | chr1_4:48691804-48691823 | Msa0167030:intron | 35.0% |
| TCAGACAAGAAAGATGCTTT+AGG | + | chr1_4:48691871-48691890 | None:intergenic | 35.0% | |
| CTGGTCTCAGGTTAAAATAT+TGG | - | chr1_4:48691891-48691910 | Msa0167030:intron | 35.0% | |
| AAGGCTACATTGGACAAAAT+CGG | - | chr1_4:48691950-48691969 | Msa0167030:intron | 35.0% | |
| !!! | AAGGCTATGGTTTTAGAATC+AGG | + | chr1_4:48692025-48692044 | None:intergenic | 35.0% |
| ! | TCTAAAACCATAGCCTTTGT+TGG | - | chr1_4:48692028-48692047 | Msa0167030:CDS | 35.0% |
| TTCATTACCAACAAAGGCTA+TGG | + | chr1_4:48692038-48692057 | None:intergenic | 35.0% | |
| !! | ATAGCCTTTGTTGGTAATGA+AGG | - | chr1_4:48692037-48692056 | Msa0167030:intron | 35.0% |
| !! | TTTTGAATGGCTGGTAATGA+AGG | - | chr1_4:48692076-48692095 | Msa0167030:intron | 35.0% |
| AGCAATTAATTGGTACACTG+AGG | - | chr1_4:48692128-48692147 | Msa0167030:intron | 35.0% | |
| TATTGAATCAAATGCCGAAC+TGG | - | chr1_4:48692241-48692260 | Msa0167030:intron | 35.0% | |
| ! | GCTGTTCATTTTATTAGTGC+TGG | - | chr1_4:48692263-48692282 | Msa0167030:intron | 35.0% |
| GTTTATAATCACACCGAACT+CGG | + | chr1_4:48692303-48692322 | None:intergenic | 35.0% | |
| GACTTAAAATTGAGAAGCTG+CGG | + | chr1_4:48692332-48692351 | None:intergenic | 35.0% | |
| TAAATACTGAACTAGGCAAC+TGG | + | chr1_4:48692354-48692373 | None:intergenic | 35.0% | |
| AGTTGCCTAGTTCAGTATTT+AGG | - | chr1_4:48692353-48692372 | Msa0167030:intron | 35.0% | |
| GAAAGTTGACACAACATTGA+AGG | - | chr1_4:48692617-48692636 | Msa0167030:CDS | 35.0% | |
| GTACTAGATGGCCTATAAAA+TGG | + | chr1_4:48692804-48692823 | None:intergenic | 35.0% | |
| ACTAGAGAGAATATGCTCTT+TGG | - | chr1_4:48693025-48693044 | Msa0167030:intron | 35.0% | |
| ! | GATTTTCCATGTTTACATGG+CGG | - | chr1_4:48693135-48693154 | Msa0167030:CDS | 35.0% |
| !!! | CCGTTTTTTTTGTCCTTTAG+TGG | + | chr1_4:48693196-48693215 | None:intergenic | 35.0% |
| !! | AACAAGTATCGACTTGTTAG+TGG | + | chr1_4:48693232-48693251 | None:intergenic | 35.0% |
| !! | TACATATGAGTTTGGTTTGG+CGG | - | chr1_4:48693522-48693541 | Msa0167030:intron | 35.0% |
| ! | TTTTCTTTTTCCAGTAGCCT+CGG | + | chr1_4:48693925-48693944 | None:intergenic | 35.0% |
| GAACGGTTACATTATACGAT+TGG | - | chr1_4:48694239-48694258 | Msa0167030:intron | 35.0% | |
| AGTAGAACAAAGAAGCAAGT+AGG | + | chr1_4:48694368-48694387 | None:intergenic | 35.0% | |
| ! | TCAAGCTAATGCAAAAGCAT+AGG | - | chr1_4:48694618-48694637 | Msa0167030:intron | 35.0% |
| CATTAATAAACAGTGCACAC+TGG | - | chr1_4:48690322-48690341 | Msa0167030:intron | 35.0% | |
| CACTTATGAATACAAACCTG+GGG | + | chr1_4:48690362-48690381 | None:intergenic | 35.0% | |
| GACACTTATGAATACAAACC+TGG | + | chr1_4:48690364-48690383 | None:intergenic | 35.0% | |
| GTTAGAGAACAATCAGAAAC+CGG | - | chr1_4:48690543-48690562 | Msa0167030:intron | 35.0% | |
| GGCGGTAAATATTTCGATAA+TGG | - | chr1_4:48690627-48690646 | Msa0167030:intron | 35.0% | |
| AAAGTCTCAAAGAAGATGAG+TGG | - | chr1_4:48690832-48690851 | Msa0167030:intron | 35.0% | |
| AAGTCTCAAAGAAGATGAGT+GGG | - | chr1_4:48690833-48690852 | Msa0167030:intron | 35.0% | |
| GTAAAAATAGACGTAGTACC+AGG | - | chr1_4:48690878-48690897 | Msa0167030:intron | 35.0% | |
| TTATCAGGAACAACAGTATC+CGG | + | chr1_4:48691024-48691043 | None:intergenic | 35.0% | |
| !! | AGATTTGCTGGTACATTATC+AGG | + | chr1_4:48691039-48691058 | None:intergenic | 35.0% |
| !! | GATATTTCTGGAAGATTTGC+TGG | + | chr1_4:48691051-48691070 | None:intergenic | 35.0% |
| GATATAGAGACTGTAGGTAT+AGG | + | chr1_4:48691142-48691161 | None:intergenic | 35.0% | |
| AAATTCTGTTCCTACCTCTT+TGG | - | chr1_4:48691193-48691212 | Msa0167030:intron | 35.0% | |
| ! | ATGATTTTCCACAACCTTCA+CGG | + | chr1_4:48691411-48691430 | None:intergenic | 35.0% |
| GGTTGTGGAAAATCATGATT+TGG | - | chr1_4:48691415-48691434 | Msa0167030:intron | 35.0% | |
| GATATAGAGACTGTAGGTAT+AGG | + | chr1_4:48691142-48691161 | None:intergenic | 35.0% | |
| ! | TCCTACTTCTTTGTTATCAC+CGG | - | chr1_4:48696167-48696186 | Msa0167030:intron | 35.0% |
| ACGGGATATGTCAATTAAGA+CGG | - | chr1_4:48696233-48696252 | Msa0167030:intron | 35.0% | |
| ATATGTCAATTAAGACGGGT+AGG | - | chr1_4:48696238-48696257 | Msa0167030:intron | 35.0% | |
| TATGTCAATTAAGACGGGTA+GGG | - | chr1_4:48696239-48696258 | Msa0167030:intron | 35.0% | |
| GGGTTTAATATTATGCATCC+GGG | + | chr1_4:48696304-48696323 | None:intergenic | 35.0% | |
| ! | TCTTCCCTTTTGTGATTGAA+CGG | + | chr1_4:48696442-48696461 | None:intergenic | 35.0% |
| GAAGAGTAAACACAATGTCT+GGG | - | chr1_4:48696457-48696476 | Msa0167030:intron | 35.0% | |
| ! | GGTTTTTGCTGAAAAGGTTT+TGG | + | chr1_4:48696514-48696533 | None:intergenic | 35.0% |
| TCTTCTGTAAAATCTCCTCA+AGG | - | chr1_4:48696612-48696631 | Msa0167030:intron | 35.0% | |
| AATGTAAGTCACTCGAACAA+GGG | - | chr1_4:48696639-48696658 | Msa0167030:intron | 35.0% | |
| !!! | TTTTTGAGACTCAATGACTC+TGG | + | chr1_4:48696693-48696712 | None:intergenic | 35.0% |
| AGTCTCAAAAAATCCAGATC+TGG | - | chr1_4:48696702-48696721 | Msa0167030:intron | 35.0% | |
| !! | GTTTGGGTTATTTTGTAGGA+AGG | - | chr1_4:48696939-48696958 | Msa0167030:intron | 35.0% |
| TGATATCTTCAACAACCTAC+TGG | - | chr1_4:48697021-48697040 | Msa0167030:intron | 35.0% | |
| ! | CTTTTTACATTTTACCGTCC+AGG | - | chr1_4:48697076-48697095 | Msa0167030:intron | 35.0% |
| CCTGAATTTCTGTAATCTCA+CGG | + | chr1_4:48697103-48697122 | None:intergenic | 35.0% | |
| GAGATTACAGAAATTCAGGA+AGG | - | chr1_4:48697104-48697123 | Msa0167030:intron | 35.0% | |
| AATGATGAAGAGCCTCTAAA+AGG | + | chr1_4:48697146-48697165 | None:intergenic | 35.0% | |
| !! | TTTTAGAGGCTCTTCATCAT+TGG | - | chr1_4:48697145-48697164 | Msa0167030:intron | 35.0% |
| TTTAGAGGCTCTTCATCATT+GGG | - | chr1_4:48697146-48697165 | Msa0167030:intron | 35.0% | |
| TTCTCACTAATACCTAACTG+AGG | - | chr1_4:48697285-48697304 | Msa0167030:intron | 35.0% | |
| ACTAATACCTAACTGAGGTT+CGG | - | chr1_4:48697290-48697309 | Msa0167030:intron | 35.0% | |
| TTACTGGGAAATGTTTAAGC+TGG | - | chr1_4:48697452-48697471 | Msa0167030:intron | 35.0% | |
| CGGCTCCATTATTTAATCTT+TGG | - | chr1_4:48697497-48697516 | Msa0167030:intron | 35.0% | |
| ACAAGTACAACAGCAAAATC+GGG | + | chr1_4:48697580-48697599 | None:intergenic | 35.0% | |
| TTGTACTTGTAGTCTTCAGT+GGG | - | chr1_4:48697590-48697609 | Msa0167030:intron | 35.0% | |
| CTGGTAATATAATCATGAGC+TGG | + | chr1_4:48697665-48697684 | None:intergenic | 35.0% | |
| TCTAACATTGGATTTGCATC+TGG | + | chr1_4:48697684-48697703 | None:intergenic | 35.0% | |
| ! | TCTGCGAGTTTTGCAATATA+TGG | - | chr1_4:48697746-48697765 | Msa0167030:intron | 35.0% |
| ! | CTGCGAGTTTTGCAATATAT+GGG | - | chr1_4:48697747-48697766 | Msa0167030:intron | 35.0% |
| GAATAATTAGTGATGCCGTT+CGG | - | chr1_4:48697868-48697887 | Msa0167030:intron | 35.0% | |
| ATTCAAAAAGGAGGAGAAAC+AGG | + | chr1_4:48697919-48697938 | None:intergenic | 35.0% | |
| TTTATCTAATCTGCTGACAG+TGG | + | chr1_4:48697942-48697961 | None:intergenic | 35.0% | |
| TAAATCAAATTGGCGTGGTT+TGG | + | chr1_4:48698298-48698317 | None:intergenic | 35.0% | |
| ! | TGTCTATGAAGTTTGTTTGG+TGG | - | chr1_4:48698384-48698403 | Msa0167030:CDS | 35.0% |
| ATTAGGTGAACTTCTGAATC+TGG | - | chr1_4:48698470-48698489 | Msa0167030:intron | 35.0% | |
| ! | AACTTCTGAATCTGGTGTTT+TGG | - | chr1_4:48698478-48698497 | Msa0167030:intron | 35.0% |
| !! | TGAATCTGGTGTTTTGGATA+TGG | - | chr1_4:48698484-48698503 | Msa0167030:intron | 35.0% |
| !! | TGGTGTTTTGGATATGGTTT+GGG | - | chr1_4:48698490-48698509 | Msa0167030:intron | 35.0% |
| ! | AACTCGTTCAAAGTATTCAC+TGG | - | chr1_4:48698558-48698577 | Msa0167030:CDS | 35.0% |
| ! | AGTATTCACTGGTCAACTTT+TGG | - | chr1_4:48698569-48698588 | Msa0167030:CDS | 35.0% |
| !! | TTTTGGTTGTTAGTGTAGTC+TGG | - | chr1_4:48698618-48698637 | Msa0167030:CDS | 35.0% |
| ACTTCACTTACATGTACATG+TGG | - | chr1_4:48698653-48698672 | Msa0167030:intron | 35.0% | |
| ! | TTAGCATTTTCATGTGTTGC+TGG | - | chr1_4:48698747-48698766 | Msa0167030:intron | 35.0% |
| CTAATACATCAACTCGTACA+TGG | + | chr1_4:48698834-48698853 | None:intergenic | 35.0% | |
| TATACCATCGACAGTCTCAA+GGG | + | chr1_4:48690282-48690301 | None:intergenic | 40.0% | |
| ATATACCATCGACAGTCTCA+AGG | + | chr1_4:48690283-48690302 | None:intergenic | 40.0% | |
| AAACAGTGCACACTGGATAA+TGG | - | chr1_4:48690329-48690348 | Msa0167030:intron | 40.0% | |
| !! | ATCAGAAACCGGTACTGATT+CGG | - | chr1_4:48690554-48690573 | Msa0167030:intron | 40.0% |
| TATCAAGGAACTTTCTCTGG+CGG | - | chr1_4:48690609-48690628 | Msa0167030:intron | 40.0% | |
| AAAGTCCATTCCTACTTCGT+CGG | - | chr1_4:48690753-48690772 | Msa0167030:intron | 40.0% | |
| ATGGAGTCTTGCAATTCTCT+GGG | + | chr1_4:48690795-48690814 | None:intergenic | 40.0% | |
| AATGGAGTCTTGCAATTCTC+TGG | + | chr1_4:48690796-48690815 | None:intergenic | 40.0% | |
| TGAGACTTTGCATTCATCTC+CGG | + | chr1_4:48690821-48690840 | None:intergenic | 40.0% | |
| AGTCTCAAAGAAGATGAGTG+GGG | - | chr1_4:48690834-48690853 | Msa0167030:intron | 40.0% | |
| GTTGATATTGCTTGTGGTAG+TGG | - | chr1_4:48690856-48690875 | Msa0167030:intron | 40.0% | |
| ! | ATCCGGATCATGATTTTCGA+CGG | + | chr1_4:48691007-48691026 | None:intergenic | 40.0% |
| AGTGAGGTCAACGATATTCA+TGG | - | chr1_4:48691275-48691294 | Msa0167030:intron | 40.0% | |
| GTCAACGATATTCATGGTAG+TGG | - | chr1_4:48691281-48691300 | Msa0167030:intron | 40.0% | |
| AGTCCTTAGTACTATGCAAC+CGG | + | chr1_4:48691325-48691344 | None:intergenic | 40.0% | |
| TCTTTCTCTGGATTCTTGAG+AGG | + | chr1_4:48691377-48691396 | None:intergenic | 40.0% | |
| ! | TGGTGATGCACTATAAGATC+TGG | - | chr1_4:48691606-48691625 | Msa0167030:intron | 40.0% |
| CCCTTCAAAATAGAGATCGT+TGG | + | chr1_4:48691646-48691665 | None:intergenic | 40.0% | |
| CTTCCGGTCCCTTAAAAAAT+TGG | + | chr1_4:48691778-48691797 | None:intergenic | 40.0% | |
| AAGCATCTTTCTTGTCTGAC+TGG | - | chr1_4:48691872-48691891 | Msa0167030:intron | 40.0% | |
| TGACGCCTAAATACTGAACT+AGG | + | chr1_4:48692361-48692380 | None:intergenic | 40.0% | |
| !! | GGATGATAGAGAGTACTAGA+TGG | + | chr1_4:48692816-48692835 | None:intergenic | 40.0% |
| ATGATAAGCAGTACTCCCTT+TGG | - | chr1_4:48692915-48692934 | Msa0167030:CDS | 40.0% | |
| TGATAAGCAGTACTCCCTTT+GGG | - | chr1_4:48692916-48692935 | Msa0167030:CDS | 40.0% | |
| TGTCACACATTTCAAAAGGC+AGG | + | chr1_4:48693172-48693191 | None:intergenic | 40.0% | |
| TGGCTGTCACACATTTCAAA+AGG | + | chr1_4:48693176-48693195 | None:intergenic | 40.0% | |
| AAATGTGTGACAGCCACTAA+AGG | - | chr1_4:48693180-48693199 | Msa0167030:CDS | 40.0% | |
| !! | AAGTATCGACTTGTTAGTGG+TGG | + | chr1_4:48693229-48693248 | None:intergenic | 40.0% |
| ! | GTTAATAAGTGGGGTGTTTG+AGG | + | chr1_4:48693881-48693900 | None:intergenic | 40.0% |
| AAAAAGGTGAATTCTTGCCG+AGG | - | chr1_4:48693905-48693924 | Msa0167030:intron | 40.0% | |
| GTTGAAGAGAAATAAGTCGG+AGG | + | chr1_4:48694129-48694148 | None:intergenic | 40.0% | |
| GTGTGAATGAATGCGATGTT+TGG | + | chr1_4:48694151-48694170 | None:intergenic | 40.0% | |
| CATCGCATTCATTCACACAA+TGG | - | chr1_4:48694153-48694172 | Msa0167030:intron | 40.0% | |
| CGGTTACATTATACGATTGG+TGG | - | chr1_4:48694242-48694261 | Msa0167030:intron | 40.0% | |
| TGGCTCGTTAAATCATCTCA+AGG | - | chr1_4:48694262-48694281 | Msa0167030:CDS | 40.0% | |
| TGACGAGAATACTCACTTTG+TGG | + | chr1_4:48694323-48694342 | None:intergenic | 40.0% | |
| AGAACAAAGAAGCAAGTAGG+TGG | + | chr1_4:48694365-48694384 | None:intergenic | 40.0% | |
| !! | AGGCATTTAACTTGCCTTAC+TGG | - | chr1_4:48694444-48694463 | Msa0167030:intron | 40.0% |
| ACCTGACATTCTTTCCAGTA+AGG | + | chr1_4:48694461-48694480 | None:intergenic | 40.0% | |
| TATACCATCGACAGTCTCAA+GGG | + | chr1_4:48690282-48690301 | None:intergenic | 40.0% | |
| ATATACCATCGACAGTCTCA+AGG | + | chr1_4:48690283-48690302 | None:intergenic | 40.0% | |
| AAACAGTGCACACTGGATAA+TGG | - | chr1_4:48690329-48690348 | Msa0167030:intron | 40.0% | |
| !! | ATCAGAAACCGGTACTGATT+CGG | - | chr1_4:48690554-48690573 | Msa0167030:intron | 40.0% |
| TATCAAGGAACTTTCTCTGG+CGG | - | chr1_4:48690609-48690628 | Msa0167030:intron | 40.0% | |
| AAAGTCCATTCCTACTTCGT+CGG | - | chr1_4:48690753-48690772 | Msa0167030:intron | 40.0% | |
| ATGGAGTCTTGCAATTCTCT+GGG | + | chr1_4:48690795-48690814 | None:intergenic | 40.0% | |
| AATGGAGTCTTGCAATTCTC+TGG | + | chr1_4:48690796-48690815 | None:intergenic | 40.0% | |
| TGAGACTTTGCATTCATCTC+CGG | + | chr1_4:48690821-48690840 | None:intergenic | 40.0% | |
| AGTCTCAAAGAAGATGAGTG+GGG | - | chr1_4:48690834-48690853 | Msa0167030:intron | 40.0% | |
| GTTGATATTGCTTGTGGTAG+TGG | - | chr1_4:48690856-48690875 | Msa0167030:intron | 40.0% | |
| TCTTCATCTGAACACTTGAG+AGG | + | chr1_4:48695499-48695518 | None:intergenic | 40.0% | |
| ! | ATCCGGATCATGATTTTCGA+CGG | + | chr1_4:48691007-48691026 | None:intergenic | 40.0% |
| AGTCCTTAGTACTATGCAAC+CGG | + | chr1_4:48691325-48691344 | None:intergenic | 40.0% | |
| TCTTTCTCTGGATTCTTGAG+AGG | + | chr1_4:48691377-48691396 | None:intergenic | 40.0% | |
| TCCGGTGATAACAAAGAAGT+AGG | + | chr1_4:48696171-48696190 | None:intergenic | 40.0% | |
| TTATCACCGGATAAGACCAT+GGG | - | chr1_4:48696180-48696199 | Msa0167030:intron | 40.0% | |
| ACATATCCCGTTCATCTTTG+AGG | + | chr1_4:48696224-48696243 | None:intergenic | 40.0% | |
| CGGGATATGTCAATTAAGAC+GGG | - | chr1_4:48696234-48696253 | Msa0167030:intron | 40.0% | |
| GTCAATGTTGTTCATGGTAG+TGG | - | chr1_4:48696261-48696280 | Msa0167030:intron | 40.0% | |
| !! | AATGTTGTTCATGGTAGTGG+CGG | - | chr1_4:48696264-48696283 | Msa0167030:intron | 40.0% |
| TCTTTATCTGGATGTGTTGC+AGG | + | chr1_4:48696357-48696376 | None:intergenic | 40.0% | |
| ACACCCGTTCAATCACAAAA+GGG | - | chr1_4:48696435-48696454 | Msa0167030:intron | 40.0% | |
| ! | CTTCCCTTTTGTGATTGAAC+GGG | + | chr1_4:48696441-48696460 | None:intergenic | 40.0% |
| GGAAGAGTAAACACAATGTC+TGG | - | chr1_4:48696456-48696475 | Msa0167030:intron | 40.0% | |
| ! | GGAGATTTTACAGAAGATGC+AGG | + | chr1_4:48696609-48696628 | None:intergenic | 40.0% |
| CTGTAAAATCTCCTCAAGGA+AGG | - | chr1_4:48696616-48696635 | Msa0167030:intron | 40.0% | |
| TGACTTACATTCCTTCCTTG+AGG | + | chr1_4:48696630-48696649 | None:intergenic | 40.0% | |
| GAATGTAAGTCACTCGAACA+AGG | - | chr1_4:48696638-48696657 | Msa0167030:intron | 40.0% | |
| !! | TGGGTTATTTTGTAGGAAGG+TGG | - | chr1_4:48696942-48696961 | Msa0167030:intron | 40.0% |
| ! | TTCTACCTCCCTTAGAGTTT+TGG | - | chr1_4:48696966-48696985 | Msa0167030:intron | 40.0% |
| TGATTGCGCCAAAACTCTAA+GGG | + | chr1_4:48696977-48696996 | None:intergenic | 40.0% | |
| TTGATTGCGCCAAAACTCTA+AGG | + | chr1_4:48696978-48696997 | None:intergenic | 40.0% | |
| CCGTGAGATTACAGAAATTC+AGG | - | chr1_4:48697100-48697119 | Msa0167030:intron | 40.0% | |
| ! | GATTAAATAATGGAGCCGGT+GGG | + | chr1_4:48697495-48697514 | None:intergenic | 40.0% |
| ! | AGATTAAATAATGGAGCCGG+TGG | + | chr1_4:48697496-48697515 | None:intergenic | 40.0% |
| TCGGGACGATAATTCAAGAT+AGG | + | chr1_4:48697562-48697581 | None:intergenic | 40.0% | |
| GTTGTACTTGTAGTCTTCAG+TGG | - | chr1_4:48697589-48697608 | Msa0167030:intron | 40.0% | |
| !! | ATTGGCTTGTCACAAATCTC+CGG | - | chr1_4:48697788-48697807 | Msa0167030:intron | 40.0% |
| AACAATTCAGTGCCTTAACG+TGG | - | chr1_4:48697825-48697844 | Msa0167030:intron | 40.0% | |
| ACAATTCAGTGCCTTAACGT+GGG | - | chr1_4:48697826-48697845 | Msa0167030:intron | 40.0% | |
| ! | TGACAGTGGATTCAAAAAGG+AGG | + | chr1_4:48697928-48697947 | None:intergenic | 40.0% |
| ! | TGCTGACAGTGGATTCAAAA+AGG | + | chr1_4:48697931-48697950 | None:intergenic | 40.0% |
| ATCAGTGATAGCAGGACATA+TGG | + | chr1_4:48698178-48698197 | None:intergenic | 40.0% | |
| ATGCTTCATAGCAACGAAGT+TGG | - | chr1_4:48698422-48698441 | Msa0167030:intron | 40.0% | |
| !! | CTGGTGTTTTGGATATGGTT+TGG | - | chr1_4:48698489-48698508 | Msa0167030:intron | 40.0% |
| !! | GGTGTTTTGGATATGGTTTG+GGG | - | chr1_4:48698491-48698510 | Msa0167030:intron | 40.0% |
| ATCTCAATGGCCCGTTTATA+AGG | - | chr1_4:48698699-48698718 | Msa0167030:intron | 40.0% | |
| ATACATCAACTCGTACATGG+AGG | + | chr1_4:48698831-48698850 | None:intergenic | 40.0% | |
| !! | GGATAATGGTTTTACTCCCC+AGG | - | chr1_4:48690343-48690362 | Msa0167030:intron | 45.0% |
| TGTTTCATTGCTACCCCTGA+TGG | - | chr1_4:48690427-48690446 | Msa0167030:intron | 45.0% | |
| !!! | TGATTCGGTCAGTGCTGTTT+TGG | - | chr1_4:48690569-48690588 | Msa0167030:intron | 45.0% |
| CAATACCGACGAAGTAGGAA+TGG | + | chr1_4:48690761-48690780 | None:intergenic | 45.0% | |
| TGGAGTCTTGCAATTCTCTG+GGG | + | chr1_4:48690794-48690813 | None:intergenic | 45.0% | |
| AATTGCAAGACTCCATTCCC+CGG | - | chr1_4:48690799-48690818 | Msa0167030:intron | 45.0% | |
| AGACTTTGCATTCATCTCCG+GGG | + | chr1_4:48690819-48690838 | None:intergenic | 45.0% | |
| GAGACTTTGCATTCATCTCC+GGG | + | chr1_4:48690820-48690839 | None:intergenic | 45.0% | |
| !! | AGTGGGGTTGATATTGCTTG+TGG | - | chr1_4:48690850-48690869 | Msa0167030:intron | 45.0% |
| TCTTCATCTGAACGCTTGAG+AGG | + | chr1_4:48690964-48690983 | None:intergenic | 45.0% | |
| ! | ATGATTTTCGACGGCCTTTG+AGG | + | chr1_4:48690998-48691017 | None:intergenic | 45.0% |
| !! | ACGATATTCATGGTAGTGGC+CGG | - | chr1_4:48691285-48691304 | Msa0167030:intron | 45.0% |
| TAGAGATCGTTGGATAAGGG+AGG | + | chr1_4:48691636-48691655 | None:intergenic | 45.0% | |
| ! | CTTTTGTCTTCCGTTTGCCA+TGG | + | chr1_4:48691817-48691836 | None:intergenic | 45.0% |
| !! | TTTCTTGTCTGACTGGTCTC+AGG | - | chr1_4:48691879-48691898 | Msa0167030:intron | 45.0% |
| GACAAAATCGGTCCACTTCT+CGG | - | chr1_4:48691962-48691981 | Msa0167030:intron | 45.0% | |
| ! | GGACAGAAAGCTTTGTCAGT+GGG | - | chr1_4:48692190-48692209 | Msa0167030:intron | 45.0% |
| TCAGAAGATCTCACCGAGTT+CGG | - | chr1_4:48692287-48692306 | Msa0167030:intron | 45.0% | |
| ! | TCTCCTTTTTGTGACAGCAG+TGG | - | chr1_4:48692576-48692595 | Msa0167030:CDS | 45.0% |
| TGTCCACTGCTGTCACAAAA+AGG | + | chr1_4:48692582-48692601 | None:intergenic | 45.0% | |
| TCAAAAGGCAGGACAATGTG+AGG | + | chr1_4:48693161-48693180 | None:intergenic | 45.0% | |
| CCAACTGAGTTATGCTCATG+GGG | + | chr1_4:48693828-48693847 | None:intergenic | 45.0% | |
| GCCAACTGAGTTATGCTCAT+GGG | + | chr1_4:48693829-48693848 | None:intergenic | 45.0% | |
| TGCCAACTGAGTTATGCTCA+TGG | + | chr1_4:48693830-48693849 | None:intergenic | 45.0% | |
| ATGAGCATAACTCAGTTGGC+AGG | - | chr1_4:48693829-48693848 | Msa0167030:CDS | 45.0% | |
| TGAGCATAACTCAGTTGGCA+GGG | - | chr1_4:48693830-48693849 | Msa0167030:CDS | 45.0% | |
| AGTTGGCAGGGGTTATATCA+GGG | - | chr1_4:48693842-48693861 | Msa0167030:CDS | 45.0% | |
| AGAGAAATAAGTCGGAGGAG+AGG | + | chr1_4:48694124-48694143 | None:intergenic | 45.0% | |
| GGGGTGCAATTAGAAGAACT+GGG | + | chr1_4:48694190-48694209 | None:intergenic | 45.0% | |
| ! | AGAAGAAGAAGAAGGTGTGG+GGG | + | chr1_4:48694209-48694228 | None:intergenic | 45.0% |
| ! | GAGAAGAAGAAGAAGGTGTG+GGG | + | chr1_4:48694210-48694229 | None:intergenic | 45.0% |
| ! | CGAGAAGAAGAAGAAGGTGT+GGG | + | chr1_4:48694211-48694230 | None:intergenic | 45.0% |
| TCGAAGCGAGAAGAAGAAGA+AGG | + | chr1_4:48694217-48694236 | None:intergenic | 45.0% | |
| TTCTTCTCGCTTCGAACGAA+CGG | - | chr1_4:48694222-48694241 | Msa0167030:intron | 45.0% | |
| GCCTTACTGGAAAGAATGTC+AGG | - | chr1_4:48694457-48694476 | Msa0167030:intron | 45.0% | |
| GTTGTGATTCAGGGAAGAAG+CGG | - | chr1_4:48694743-48694762 | Msa0167030:intron | 45.0% | |
| !! | GGATAATGGTTTTACTCCCC+AGG | - | chr1_4:48690343-48690362 | Msa0167030:intron | 45.0% |
| TGTTTCATTGCTACCCCTGA+TGG | - | chr1_4:48690427-48690446 | Msa0167030:intron | 45.0% | |
| !!! | TGATTCGGTCAGTGCTGTTT+TGG | - | chr1_4:48690569-48690588 | Msa0167030:intron | 45.0% |
| CAATACCGACGAAGTAGGAA+TGG | + | chr1_4:48690761-48690780 | None:intergenic | 45.0% | |
| TGGAGTCTTGCAATTCTCTG+GGG | + | chr1_4:48690794-48690813 | None:intergenic | 45.0% | |
| AATTGCAAGACTCCATTCCC+CGG | - | chr1_4:48690799-48690818 | Msa0167030:intron | 45.0% | |
| AGACTTTGCATTCATCTCCG+GGG | + | chr1_4:48690819-48690838 | None:intergenic | 45.0% | |
| GAGACTTTGCATTCATCTCC+GGG | + | chr1_4:48690820-48690839 | None:intergenic | 45.0% | |
| !! | AGTGGGGTTGATATTGCTTG+TGG | - | chr1_4:48690850-48690869 | Msa0167030:intron | 45.0% |
| ! | ATGATTTTCGACGGCCTTTG+AGG | + | chr1_4:48690998-48691017 | None:intergenic | 45.0% |
| AGTGAGGTCAACGATGTTCA+TGG | - | chr1_4:48695810-48695829 | Msa0167030:intron | 45.0% | |
| GTCAACGATGTTCATGGTAG+TGG | - | chr1_4:48695816-48695835 | Msa0167030:intron | 45.0% | |
| TTCAAATGTTGTCGCAGCTG+TGG | - | chr1_4:48696134-48696153 | Msa0167030:intron | 45.0% | |
| GTTATCACCGGATAAGACCA+TGG | - | chr1_4:48696179-48696198 | Msa0167030:intron | 45.0% | |
| AGGCACTCCTCAAAGATGAA+CGG | - | chr1_4:48696214-48696233 | Msa0167030:intron | 45.0% | |
| GGTAGGGTCAATGTTGTTCA+TGG | - | chr1_4:48696255-48696274 | Msa0167030:intron | 45.0% | |
| !! | ATGTTGTTCATGGTAGTGGC+GGG | - | chr1_4:48696265-48696284 | Msa0167030:intron | 45.0% |
| ! | ACAGCGATCTGGTCTTTATC+TGG | + | chr1_4:48696369-48696388 | None:intergenic | 45.0% |
| GCATCCTTGGAAATGACTGA+TGG | - | chr1_4:48696393-48696412 | Msa0167030:intron | 45.0% | |
| TCCTTGGAAATGACTGATGG+AGG | - | chr1_4:48696396-48696415 | Msa0167030:intron | 45.0% | |
| TCCTCCATCAGTCATTTCCA+AGG | + | chr1_4:48696400-48696419 | None:intergenic | 45.0% | |
| GACACCCGTTCAATCACAAA+AGG | - | chr1_4:48696434-48696453 | Msa0167030:intron | 45.0% | |
| AGTAAACACAATGTCTGGGC+AGG | - | chr1_4:48696461-48696480 | Msa0167030:intron | 45.0% | |
| GGCGACAATTGAAACAGAAG+CGG | - | chr1_4:48696557-48696576 | Msa0167030:intron | 45.0% | |
| ! | CAATGACTCTGGAGAAACTG+TGG | + | chr1_4:48696682-48696701 | None:intergenic | 45.0% |
| !! | TAGCATTGGCTGAGAAGTGT+TGG | + | chr1_4:48696860-48696879 | None:intergenic | 45.0% |
| TTTCTGTAATCTCACGGTCC+TGG | + | chr1_4:48697097-48697116 | None:intergenic | 45.0% | |
| CTAACTGAGGTTCGGAAGAA+GGG | - | chr1_4:48697298-48697317 | Msa0167030:intron | 45.0% | |
| AACGTAGAACTCTAACCCAC+CGG | - | chr1_4:48697477-48697496 | Msa0167030:intron | 45.0% | |
| ! | GCACGATTTTACCCACGTTA+AGG | + | chr1_4:48697840-48697859 | None:intergenic | 45.0% |
| CTTATGCGTCTCATACCGAA+CGG | + | chr1_4:48697886-48697905 | None:intergenic | 45.0% | |
| AAAAGGAGGAGAAACAGGCT+TGG | + | chr1_4:48697914-48697933 | None:intergenic | 45.0% | |
| GTGATAGCAGGACATATGGT+TGG | + | chr1_4:48698174-48698193 | None:intergenic | 45.0% | |
| ACTGCCAAATACCAACTCAC+TGG | - | chr1_4:48698897-48698916 | Msa0167030:CDS | 45.0% | |
| !! | GTCACCAGTGAGTTGGTATT+TGG | + | chr1_4:48698904-48698923 | None:intergenic | 45.0% |
| !!! | TTATTATTTTTTTTTTTGAA+TGG | - | chr1_4:48692063-48692082 | Msa0167030:intron | 5.0% |
| !!! | TTAAAAAGTTAAAATATTTT+TGG | + | chr1_4:48693288-48693307 | None:intergenic | 5.0% |
| !! | TTATTAGTATAATATAATAA+TGG | + | chr1_4:48693403-48693422 | None:intergenic | 5.0% |
| GTTTCCCTTGAGACTGTCGA+TGG | - | chr1_4:48690275-48690294 | Msa0167030:intron | 50.0% | |
| !! | AGCACTGACCGAATCAGTAC+CGG | + | chr1_4:48690565-48690584 | None:intergenic | 50.0% |
| TCAGGCAATACCGACGAAGT+AGG | + | chr1_4:48690766-48690785 | None:intergenic | 50.0% | |
| TTCGTCGGTATTGCCTGAAG+AGG | - | chr1_4:48690768-48690787 | Msa0167030:intron | 50.0% | |
| TTGCATTCATCTCCGGGGAA+TGG | + | chr1_4:48690814-48690833 | None:intergenic | 50.0% | |
| ! | CTCGATGTAGGATGCTGCTT+CGG | + | chr1_4:48690937-48690956 | None:intergenic | 50.0% |
| AAGCAGCATCCTACATCGAG+AGG | - | chr1_4:48690937-48690956 | Msa0167030:intron | 50.0% | |
| TTGAGAGGACCTCTCGATGT+AGG | + | chr1_4:48690949-48690968 | None:intergenic | 50.0% | |
| AGAGCCAAGCTCTACCTCAA+AGG | - | chr1_4:48690981-48691000 | Msa0167030:intron | 50.0% | |
| GGCCGTCGAAAATCATGATC+CGG | - | chr1_4:48691002-48691021 | Msa0167030:intron | 50.0% | |
| TCTCTCGTGACCAAAGAGGT+AGG | + | chr1_4:48691206-48691225 | None:intergenic | 50.0% | |
| GCAATCTCTCGTGACCAAAG+AGG | + | chr1_4:48691210-48691229 | None:intergenic | 50.0% | |
| TGGCCGGTTGCATAGTACTA+AGG | - | chr1_4:48691319-48691338 | Msa0167030:intron | 50.0% | |
| TTGAGAGGATCTCCATACGC+AGG | + | chr1_4:48691362-48691381 | None:intergenic | 50.0% | |
| GTAGAGCTCTGCTCTTTCTC+TGG | + | chr1_4:48691389-48691408 | None:intergenic | 50.0% | |
| AGAGCAGAGCTCTACCTTGA+AGG | - | chr1_4:48691394-48691413 | Msa0167030:intron | 50.0% | |
| GAGCTCTACCTTGAAGGTTG+TGG | - | chr1_4:48691400-48691419 | Msa0167030:intron | 50.0% | |
| ! | CGATTCCTTAGCTTTCGCTG+AGG | - | chr1_4:48692165-48692184 | Msa0167030:CDS | 50.0% |
| ! | TCCTTAGCTTTCGCTGAGGA+CGG | - | chr1_4:48692169-48692188 | Msa0167030:CDS | 50.0% |
| ! | CGGACAGAAAGCTTTGTCAG+TGG | - | chr1_4:48692189-48692208 | Msa0167030:intron | 50.0% |
| ! | GTGGGCATTGCAACTCAACT+TGG | - | chr1_4:48692208-48692227 | Msa0167030:intron | 50.0% |
| CCCCATGAGCATAACTCAGT+TGG | - | chr1_4:48693825-48693844 | Msa0167030:CDS | 50.0% | |
| GAGCATAACTCAGTTGGCAG+GGG | - | chr1_4:48693831-48693850 | Msa0167030:CDS | 50.0% | |
| CAGTTGGCAGGGGTTATATC+AGG | - | chr1_4:48693841-48693860 | Msa0167030:CDS | 50.0% | |
| GTTGGCAGGGGTTATATCAG+GGG | - | chr1_4:48693843-48693862 | Msa0167030:CDS | 50.0% | |
| TGAATTCTTGCCGAGGCTAC+TGG | - | chr1_4:48693912-48693931 | Msa0167030:intron | 50.0% | |
| ! | GGGGGTGCAATTAGAAGAAC+TGG | + | chr1_4:48694191-48694210 | None:intergenic | 50.0% |
| GCGAGAAGAAGAAGAAGGTG+TGG | + | chr1_4:48694212-48694231 | None:intergenic | 50.0% | |
| AACCACCGTTTAGCCATCTC+CGG | - | chr1_4:48694289-48694308 | Msa0167030:CDS | 50.0% | |
| TCACTTTGTGGAAGAGACGC+CGG | + | chr1_4:48694311-48694330 | None:intergenic | 50.0% | |
| GATTCAGGGAAGAAGCGGTT+CGG | - | chr1_4:48694748-48694767 | Msa0167030:intron | 50.0% | |
| ATTCAGGGAAGAAGCGGTTC+GGG | - | chr1_4:48694749-48694768 | Msa0167030:intron | 50.0% | |
| GTTTCCCTTGAGACTGTCGA+TGG | - | chr1_4:48690275-48690294 | Msa0167030:intron | 50.0% | |
| !! | AGCACTGACCGAATCAGTAC+CGG | + | chr1_4:48690565-48690584 | None:intergenic | 50.0% |
| TCAGGCAATACCGACGAAGT+AGG | + | chr1_4:48690766-48690785 | None:intergenic | 50.0% | |
| TTCGTCGGTATTGCCTGAAG+AGG | - | chr1_4:48690768-48690787 | Msa0167030:intron | 50.0% | |
| TTGCATTCATCTCCGGGGAA+TGG | + | chr1_4:48690814-48690833 | None:intergenic | 50.0% | |
| ! | CTCGATGTAGGATGCTGCTT+CGG | + | chr1_4:48690937-48690956 | None:intergenic | 50.0% |
| AAGCAGCATCCTACATCGAG+AGG | - | chr1_4:48690937-48690956 | Msa0167030:intron | 50.0% | |
| TTGAGAGGACCTCTCGATGT+AGG | + | chr1_4:48690949-48690968 | None:intergenic | 50.0% | |
| AGAGCCAAGCTCTACCTCAA+AGG | - | chr1_4:48690981-48691000 | Msa0167030:intron | 50.0% | |
| GGCCGTCGAAAATCATGATC+CGG | - | chr1_4:48691002-48691021 | Msa0167030:intron | 50.0% | |
| TCTCTCGTGACCAAAGAGGT+AGG | + | chr1_4:48691206-48691225 | None:intergenic | 50.0% | |
| GCATTCTCTCGTGACCAAAG+AGG | + | chr1_4:48695745-48695764 | None:intergenic | 50.0% | |
| !! | ACGATGTTCATGGTAGTGGC+CGG | - | chr1_4:48695820-48695839 | Msa0167030:intron | 50.0% |
| TGGCCGGTTGCATAGTACTA+AGG | - | chr1_4:48691319-48691338 | Msa0167030:intron | 50.0% | |
| TTGAGAGGATCTCCATACGC+AGG | + | chr1_4:48691362-48691381 | None:intergenic | 50.0% | |
| GTAGAGCTCTGCTCTTTCTC+TGG | + | chr1_4:48691389-48691408 | None:intergenic | 50.0% | |
| !! | CGATCTCCCATGGTCTTATC+CGG | + | chr1_4:48696189-48696208 | None:intergenic | 50.0% |
| GACCATGGGAGATCGCAATA+AGG | - | chr1_4:48696194-48696213 | Msa0167030:intron | 50.0% | |
| ! | TGCCTTATTGCGATCTCCCA+TGG | + | chr1_4:48696199-48696218 | None:intergenic | 50.0% |
| GGCACTCCTCAAAGATGAAC+GGG | - | chr1_4:48696215-48696234 | Msa0167030:intron | 50.0% | |
| GCAGGTTGCTTCTTCTGGTA+GGG | + | chr1_4:48696324-48696343 | None:intergenic | 50.0% | |
| AGCAGGTTGCTTCTTCTGGT+AGG | + | chr1_4:48696325-48696344 | None:intergenic | 50.0% | |
| CAGTAGCAGGTTGCTTCTTC+TGG | + | chr1_4:48696329-48696348 | None:intergenic | 50.0% | |
| CAGAAGAAGCAACCTGCTAC+TGG | - | chr1_4:48696327-48696346 | Msa0167030:intron | 50.0% | |
| GGAAATGACTGATGGAGGAC+TGG | - | chr1_4:48696401-48696420 | Msa0167030:intron | 50.0% | |
| ! | TTGCGCCAAAACTCTAAGGG+AGG | + | chr1_4:48696974-48696993 | None:intergenic | 50.0% |
| TGTAATCTCACGGTCCTGGA+CGG | + | chr1_4:48697093-48697112 | None:intergenic | 50.0% | |
| CCTTCTTCCGAACCTCAGTT+AGG | + | chr1_4:48697300-48697319 | None:intergenic | 50.0% | |
| CCTAACTGAGGTTCGGAAGA+AGG | - | chr1_4:48697297-48697316 | Msa0167030:intron | 50.0% | |
| TGAGGTTCGGAAGAAGGGTA+GGG | - | chr1_4:48697303-48697322 | Msa0167030:intron | 50.0% | |
| ! | TTGTTTTCCTCTCCAAGCGC+CGG | + | chr1_4:48697810-48697829 | None:intergenic | 50.0% |
| !! | CAATTCTCTGGGGCCTCTTC+AGG | + | chr1_4:48690784-48690803 | None:intergenic | 55.0% |
| !! | ACGGCCTTTGAGGTAGAGCT+TGG | + | chr1_4:48690988-48691007 | None:intergenic | 55.0% |
| CATACGCAGGCTGCTTCTTC+TGG | + | chr1_4:48691349-48691368 | None:intergenic | 55.0% | |
| CAGAAGAAGCAGCCTGCGTA+TGG | - | chr1_4:48691347-48691366 | Msa0167030:intron | 55.0% | |
| AAATCGGTCCACTTCTCGGC+AGG | - | chr1_4:48691966-48691985 | Msa0167030:intron | 55.0% | |
| AATCGGTCCACTTCTCGGCA+GGG | - | chr1_4:48691967-48691986 | Msa0167030:intron | 55.0% | |
| TCCGTCCTCAGCGAAAGCTA+AGG | + | chr1_4:48692173-48692192 | None:intergenic | 55.0% | |
| GTGAGGCCGCCATGTAAACA+TGG | + | chr1_4:48693144-48693163 | None:intergenic | 55.0% | |
| GCAGGGGTTATATCAGGGGT+CGG | - | chr1_4:48693847-48693866 | Msa0167030:CDS | 55.0% | |
| CAGGGGTTATATCAGGGGTC+GGG | - | chr1_4:48693848-48693867 | Msa0167030:CDS | 55.0% | |
| AGGGGTTATATCAGGGGTCG+GGG | - | chr1_4:48693849-48693868 | Msa0167030:CDS | 55.0% | |
| GGACTCTCTCTCACGCTGTA+CGG | + | chr1_4:48694103-48694122 | None:intergenic | 55.0% | |
| AGACGCCGGAGATGGCTAAA+CGG | + | chr1_4:48694297-48694316 | None:intergenic | 55.0% | |
| !! | CAATTCTCTGGGGCCTCTTC+AGG | + | chr1_4:48690784-48690803 | None:intergenic | 55.0% |
| !! | ACGGCCTTTGAGGTAGAGCT+TGG | + | chr1_4:48690988-48691007 | None:intergenic | 55.0% |
| CATACGCAGGCTGCTTCTTC+TGG | + | chr1_4:48691349-48691368 | None:intergenic | 55.0% | |
| CAGAAGAAGCAGCCTGCGTA+TGG | - | chr1_4:48691347-48691366 | Msa0167030:intron | 55.0% | |
| AGAGCAGAGCTCTACCGTGA+AGG | - | chr1_4:48695929-48695948 | Msa0167030:intron | 55.0% | |
| GAGCTCTACCGTGAAGGTTG+TGG | - | chr1_4:48695935-48695954 | Msa0167030:intron | 55.0% | |
| GTTGCAGGATCTCCAGTAGC+AGG | + | chr1_4:48696342-48696361 | None:intergenic | 55.0% | |
| AGGATGCTGAGACAGCGATC+TGG | + | chr1_4:48696380-48696399 | None:intergenic | 55.0% | |
| GATCGCTGTCTCAGCATCCT+TGG | - | chr1_4:48696380-48696399 | Msa0167030:intron | 55.0% | |
| GAGGCTCTTCATCATTGGGC+AGG | - | chr1_4:48697150-48697169 | Msa0167030:intron | 55.0% | |
| CTGAGGTTCGGAAGAAGGGT+AGG | - | chr1_4:48697302-48697321 | Msa0167030:intron | 55.0% | |
| TGTCACAAATCTCCGGCGCT+TGG | - | chr1_4:48697795-48697814 | Msa0167030:intron | 55.0% | |
| AGTGGCCGGTCTAGACGTAG+TGG | - | chr1_4:48691299-48691318 | Msa0167030:intron | 60.0% | |
| ACCGGCCACTACGTCTAGAC+CGG | + | chr1_4:48691307-48691326 | None:intergenic | 60.0% | |
| TTCTCCTCCCTGCCGAGAAG+TGG | + | chr1_4:48691977-48691996 | None:intergenic | 60.0% | |
| TGTGGAAGAGACGCCGGAGA+TGG | + | chr1_4:48694305-48694324 | None:intergenic | 60.0% | |
| ! | AGTGGCCGGACTAGACGTAG+TGG | - | chr1_4:48695834-48695853 | Msa0167030:intron | 60.0% |
| ACCGGCCACTACGTCTAGTC+CGG | + | chr1_4:48695842-48695861 | None:intergenic | 60.0% | |
| GCGGGAATAGACGTAGTGCC+CGG | - | chr1_4:48696283-48696302 | Msa0167030:intron | 60.0% | |
| CAAATCTCCGGCGCTTGGAG+AGG | - | chr1_4:48697800-48697819 | Msa0167030:intron | 60.0% | |
| GCCGGTCTAGACGTAGTGGC+CGG | - | chr1_4:48691303-48691322 | Msa0167030:intron | 65.0% | |
| CGCCGGAGATGGCTAAACGG+TGG | + | chr1_4:48694294-48694313 | None:intergenic | 65.0% | |
| ! | GCCGGACTAGACGTAGTGGC+CGG | - | chr1_4:48695838-48695857 | Msa0167030:intron | 65.0% |
| CGGTCCACTTCTCGGCAGGG+AGG | - | chr1_4:48691970-48691989 | Msa0167030:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 48690221 | 48698929 | 48690221 | ID=Msa0167030;Name=Msa0167030 |
| chr1_4 | mRNA | 48690221 | 48698929 | 48690221 | ID=Msa0167030-mRNA-1;Parent=Msa0167030;Name=Msa0167030-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.43|0.23|0.94|0.56|0.29|17|0|787 |
| chr1_4 | exon | 48698786 | 48698929 | 48698786 | ID=Msa0167030-mRNA-1:exon:14253;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48698520 | 48698667 | 48698520 | ID=Msa0167030-mRNA-1:exon:14252;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48698235 | 48698404 | 48698235 | ID=Msa0167030-mRNA-1:exon:14251;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48698106 | 48698225 | 48698106 | ID=Msa0167030-mRNA-1:exon:14250;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48694824 | 48695068 | 48694824 | ID=Msa0167030-mRNA-1:exon:14249;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48694251 | 48694395 | 48694251 | ID=Msa0167030-mRNA-1:exon:14248;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48693985 | 48694132 | 48693985 | ID=Msa0167030-mRNA-1:exon:14247;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48693738 | 48693869 | 48693738 | ID=Msa0167030-mRNA-1:exon:14246;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48693537 | 48693698 | 48693537 | ID=Msa0167030-mRNA-1:exon:14245;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48693401 | 48693429 | 48693401 | ID=Msa0167030-mRNA-1:exon:14244;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48693124 | 48693334 | 48693124 | ID=Msa0167030-mRNA-1:exon:14243;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48692909 | 48692999 | 48692909 | ID=Msa0167030-mRNA-1:exon:14242;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48692689 | 48692890 | 48692689 | ID=Msa0167030-mRNA-1:exon:14241;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48692427 | 48692667 | 48692427 | ID=Msa0167030-mRNA-1:exon:14240;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48692135 | 48692193 | 48692135 | ID=Msa0167030-mRNA-1:exon:14239;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48691979 | 48692052 | 48691979 | ID=Msa0167030-mRNA-1:exon:14238;Parent=Msa0167030-mRNA-1 |
| chr1_4 | exon | 48690221 | 48690260 | 48690221 | ID=Msa0167030-mRNA-1:exon:14237;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48698786 | 48698929 | 48698786 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48698520 | 48698667 | 48698520 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48698235 | 48698404 | 48698235 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48698106 | 48698225 | 48698106 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48694824 | 48695068 | 48694824 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48694251 | 48694395 | 48694251 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48693985 | 48694132 | 48693985 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48693738 | 48693869 | 48693738 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48693537 | 48693698 | 48693537 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48693401 | 48693429 | 48693401 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48693124 | 48693334 | 48693124 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48692909 | 48692999 | 48692909 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48692689 | 48692890 | 48692689 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48692427 | 48692667 | 48692427 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48692135 | 48692193 | 48692135 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48691979 | 48692052 | 48691979 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| chr1_4 | CDS | 48690221 | 48690260 | 48690221 | ID=Msa0167030-mRNA-1:cds;Parent=Msa0167030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
