AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0171350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171350 MtrunA17_Chr6g0485441 84.230 799 102 6 1 778 1 796 0.0 1324
Msa0171350 MtrunA17_Chr1g0189451 88.835 206 22 1 574 779 1 205 1.34e-111 337
Msa0171350 MtrunA17_Chr1g0189431 94.702 151 8 0 1 151 1 151 7.31e-100 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0171350 AT2G40730.1 71.446 802 202 9 1 779 1 798 0.0 1093
Msa0171350 AT1G71410.1 20.851 470 295 12 58 471 96 544 1.23e-13 75.5
Msa0171350 AT1G71410.2 20.851 470 295 12 58 471 96 544 1.23e-13 75.5
Msa0171350 AT1G22870.4 20.071 563 365 14 58 564 96 629 7.41e-13 72.8
Msa0171350 AT1G22870.1 20.071 563 365 14 58 564 96 629 9.32e-13 72.8
Msa0171350 AT1G22870.3 20.339 472 320 11 133 564 9 464 1.98e-11 68.2

Find 208 sgRNAs with CRISPR-Local

Find 732 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACATCTGCCAGCTAATA+AGG 0.143427 1_4:-56060720 None:intergenic
CTCCATGGGCCATTGATTCT+TGG 0.161710 1_4:+56052466 Msa0171350:CDS
ATCCGCTGAGCACCTAATTT+TGG 0.180093 1_4:-56060761 None:intergenic
GCTCAACTTTGGTGTAGTTT+TGG 0.206962 1_4:-56060549 None:intergenic
GGAAGCTGCTCTGCTGAATT+TGG 0.212704 1_4:-56055065 None:intergenic
GATCAGCAGGTTTGCCCTTC+AGG 0.243603 1_4:-56059113 None:intergenic
AAACCTGCTGCTCCAAAATT+AGG 0.271088 1_4:+56060749 Msa0171350:CDS
CTGATGATGCTGCTGCTGCC+CGG 0.276113 1_4:+56060657 Msa0171350:CDS
CCTTGTCTGTGTCATTATTA+AGG 0.278895 1_4:+56056984 Msa0171350:CDS
ATCTTGATTGTCAGGCATTA+TGG 0.280054 1_4:+56057658 Msa0171350:intron
TCCATGGGCCATTGATTCTT+GGG 0.284461 1_4:+56052467 Msa0171350:CDS
CCAAGTAAACTTGCATTTGC+TGG 0.285117 1_4:-56058768 None:intergenic
TTATCAGACAATGGCATTAC+AGG 0.290598 1_4:-56050639 None:intergenic
TCTTAAGTCCATGTTAGTTC+TGG 0.291164 1_4:+56055696 Msa0171350:CDS
CCAGCAAATGCAAGTTTACT+TGG 0.294717 1_4:+56058768 Msa0171350:CDS
CTTTGTTTGTTGCAGATTCA+TGG 0.297338 1_4:+56051779 Msa0171350:intron
CGAGGAAATGTTGAGTTTGT+AGG 0.299263 1_4:+56060841 Msa0171350:three_prime_UTR
GCCATTGTCTGATAAGATTA+AGG 0.305932 1_4:+56050647 Msa0171350:CDS
TGCCCTGGCAAGTGGCAATT+TGG 0.311971 1_4:-56060809 None:intergenic
CTCCAACATATTGATCAATA+TGG 0.316335 1_4:+56055457 Msa0171350:CDS
AAGTAATTTGATATACTAGA+TGG 0.329733 1_4:-56060912 None:intergenic
CTTCTACATCGACCGGTGAC+TGG 0.339923 1_4:+56059862 Msa0171350:CDS
TGATGATGCTGCTGCTGCCC+GGG 0.340046 1_4:+56060658 Msa0171350:CDS
TTCAGCAACCACTGGTAATC+TGG 0.340908 1_4:-56054106 None:intergenic
AAACAGTGATGTTCGATCTA+AGG 0.351656 1_4:+56057892 Msa0171350:intron
ATACCGTTTGTCTGTGAAAC+AGG 0.352541 1_4:-56060023 None:intergenic
ACTCTTCCGCTTGGGGCTCT+TGG 0.355024 1_4:+56050069 Msa0171350:CDS
TTGGCCCTTGTAGTGGGTGC+AGG 0.364858 1_4:-56060695 None:intergenic
TCTGATAAGATTAAGGAGTT+AGG 0.377819 1_4:+56050654 Msa0171350:CDS
GTTTACCCTCATGTTGCTAC+TGG 0.382745 1_4:+56055637 Msa0171350:CDS
CGGATAATCCGGACACCATC+CGG 0.385981 1_4:+56060779 Msa0171350:CDS
GGTAGACACAATACATTTCA+TGG 0.388081 1_4:+56054989 Msa0171350:CDS
CAGGAGCTGCACTGGCAGCC+CGG 0.389163 1_4:-56060676 None:intergenic
TCTTCATCCTTGCTCAACTT+TGG 0.389388 1_4:-56060560 None:intergenic
CGAACCTTACTCTTCCGCTT+GGG 0.391766 1_4:+56050061 Msa0171350:CDS
TTCTACATCGACCGGTGACT+GGG 0.396030 1_4:+56059863 Msa0171350:CDS
GCCATTGATTCTTGGGGCAT+GGG 0.396534 1_4:+56052474 Msa0171350:CDS
GGCCATTGATTCTTGGGGCA+TGG 0.398121 1_4:+56052473 Msa0171350:CDS
AAGGCATCTATCAACGTTAC+AGG 0.399522 1_4:+56057003 Msa0171350:CDS
ATTGTGAGTACAACAACATT+AGG 0.400000 1_4:-56057737 None:intergenic
GCAAAGAGTTTAATTATTGT+TGG 0.401711 1_4:-56055403 None:intergenic
TAGGGATGAATATTATGCTT+GGG 0.402454 1_4:+56051629 Msa0171350:intron
TGAAGAAACGACAAAATATT+CGG 0.412071 1_4:-56050552 None:intergenic
TAAGGTTCGCCTATGGTGTA+TGG 0.415384 1_4:-56050047 None:intergenic
TTTGTAGGTGTATCCGGAAC+TGG 0.416956 1_4:+56050011 Msa0171350:CDS
CTAATCTATGAGCTATTCTC+TGG 0.420107 1_4:+56053902 Msa0171350:CDS
CTTATTAGCTGGCAGATGTC+GGG 0.427658 1_4:+56060721 Msa0171350:CDS
CAGCTCCTGCACCCACTACA+AGG 0.431470 1_4:+56060690 Msa0171350:CDS
GTAGTGTTTGTTCTAATAGC+TGG 0.431616 1_4:-56057322 None:intergenic
TAACCAAATTGCCACTTGCC+AGG 0.432661 1_4:+56060806 Msa0171350:exon
TTGAGCAAAACAGAGGAGTT+AGG 0.433431 1_4:+56053932 Msa0171350:CDS
TTTAACAATGCAGTCAAAGC+GGG 0.442166 1_4:-56055247 None:intergenic
TGTGAAACAGGTTGAGAAAC+TGG 0.443024 1_4:-56060011 None:intergenic
GTTACACCCCGGATGGTGTC+CGG 0.443226 1_4:-56060787 None:intergenic
ATCAGCAGGTTTGCCCTTCA+GGG 0.448123 1_4:-56059112 None:intergenic
GAGATCGTTGAGGCCAGTTC+CGG 0.449992 1_4:-56050024 None:intergenic
GACACGCACAGCTCGATCAT+TGG 0.450921 1_4:-56055428 None:intergenic
CTAGAACTCACAGAAGCAAC+TGG 0.451326 1_4:-56059141 None:intergenic
TAGGTGCTCAGCGGATAATC+CGG 0.458265 1_4:+56060768 Msa0171350:CDS
GGCTACTGAGGGTGCAGGCA+TGG 0.461778 1_4:+56058731 Msa0171350:CDS
ATTGCAAGCTACTTAAAAGA+AGG 0.463678 1_4:+56057361 Msa0171350:CDS
GTAGGGATGAATATTATGCT+TGG 0.463907 1_4:+56051628 Msa0171350:intron
GAGCCCCAAGCGGAAGAGTA+AGG 0.467212 1_4:-56050065 None:intergenic
AATTTCAGTGATGTCATAGT+TGG 0.467521 1_4:-56057699 None:intergenic
CGACATCTGCCAGCTAATAA+GGG 0.468806 1_4:-56060719 None:intergenic
ATTAAGGAGTTAGGTCTTGA+AGG 0.470304 1_4:+56050663 Msa0171350:CDS
CTCCATATTGATCAATATGT+TGG 0.471473 1_4:-56055459 None:intergenic
CAATAGAAGATGTTGGTGTA+AGG 0.471614 1_4:-56059167 None:intergenic
GCATGGTGCTCACTGAAATC+TGG 0.471654 1_4:-56059840 None:intergenic
AGGAGCTGCACTGGCAGCCC+GGG 0.473190 1_4:-56060675 None:intergenic
AGGTTTGCCCTTCAGGGTAA+AGG 0.474908 1_4:-56059106 None:intergenic
TCTGCCAGCTAATAAGGGTT+TGG 0.475549 1_4:-56060714 None:intergenic
TAAATAATAAATCACCTGTC+AGG 0.481819 1_4:-56057764 None:intergenic
GATTCATGGTAATGTTTGCT+TGG 0.482771 1_4:+56051793 Msa0171350:intron
GCTTGAATGTTAGTAACAGC+TGG 0.482855 1_4:-56059975 None:intergenic
TAAGGGTTTGGCCCTTGTAG+TGG 0.484440 1_4:-56060702 None:intergenic
CTGTGTTTGAACTTTGAAGA+GGG 0.485688 1_4:-56049885 None:intergenic
TTTCCACATGCTAGAGTAGC+AGG 0.487294 1_4:+56057544 Msa0171350:CDS
TGGTAACCATGTTTAAATAC+AGG 0.490516 1_4:+56060886 Msa0171350:three_prime_UTR
TGGAGCTGGCAAAATCTGAC+TGG 0.494202 1_4:+56052424 Msa0171350:CDS
TCGTCAGATTGTGTTAAAGA+AGG 0.495220 1_4:+56055088 Msa0171350:CDS
GCAACTGGAGCATGATCAGC+AGG 0.497875 1_4:-56059126 None:intergenic
AGTGGGTGCAGGAGCTGCAC+TGG 0.497903 1_4:-56060684 None:intergenic
GACAAAGCAACATTATGAAA+AGG 0.498443 1_4:+56057946 Msa0171350:CDS
ACCCATGCCCCAAGAATCAA+TGG 0.501604 1_4:-56052475 None:intergenic
GCGAACCTTACTCTTCCGCT+TGG 0.502209 1_4:+56050060 Msa0171350:CDS
AGTGATGTCATAGTTGGAAC+TGG 0.502858 1_4:-56057693 None:intergenic
ACAAACACTACTATCTTGCT+AGG 0.504745 1_4:+56057334 Msa0171350:CDS
ATTTGGAAGCTTGCGGAAGA+AGG 0.507097 1_4:-56055048 None:intergenic
CCTTATTAGCTGGCAGATGT+CGG 0.509391 1_4:+56060720 Msa0171350:CDS
GAACTCCTCAGCTGAAAGCC+AGG 0.510223 1_4:-56055278 None:intergenic
GTTGGCTTTGTCTCTTCAAG+TGG 0.516613 1_4:-56059951 None:intergenic
GCTACTGAGGGTGCAGGCAT+GGG 0.517132 1_4:+56058732 Msa0171350:CDS
TTGCAAGCTACTTAAAAGAA+GGG 0.519591 1_4:+56057362 Msa0171350:CDS
GATGTATTTAATCTATGAGA+AGG 0.519986 1_4:-56054136 None:intergenic
GGATAATCCGGACACCATCC+GGG 0.522099 1_4:+56060780 Msa0171350:CDS
GAGAAGTCTGACCTTGGGAA+TGG 0.525202 1_4:-56053966 None:intergenic
ATTATCTGGAAGTAATGCTC+AGG 0.525894 1_4:+56050216 Msa0171350:CDS
AAGGGTTTGGCCCTTGTAGT+GGG 0.526350 1_4:-56060701 None:intergenic
CTAGAGGCTACTGAGGGTGC+AGG 0.527656 1_4:+56058726 Msa0171350:CDS
TGGTTCCTGGCTTTCAGCTG+AGG 0.528164 1_4:+56055273 Msa0171350:CDS
TACTCACAATTGATCCTGAC+AGG 0.528935 1_4:+56057750 Msa0171350:CDS
ATGATTAAGAATACCTGAGC+TGG 0.529994 1_4:-56059190 None:intergenic
TGAAGAGGGAAACGTGGATG+TGG 0.531433 1_4:-56049871 None:intergenic
CAGGATGGACATTTAGCTGC+GGG 0.533267 1_4:+56050235 Msa0171350:CDS
TTGTCACACAGACTTTAGAC+TGG 0.533497 1_4:+56051825 Msa0171350:CDS
CAGCAAATGCAAGTTTACTT+GGG 0.535552 1_4:+56058769 Msa0171350:CDS
CCATGGGCCATTGATTCTTG+GGG 0.536282 1_4:+56052468 Msa0171350:CDS
CACCATGCTTCTACATCGAC+CGG 0.536882 1_4:+56059855 Msa0171350:CDS
ACCATCAAAAGTTTCAATCT+CGG 0.537115 1_4:-56050580 None:intergenic
ATTTCAGGACGATGGTTCAC+CGG 0.538636 1_4:+56050180 Msa0171350:intron
AGTAATTTGATATACTAGAT+GGG 0.538706 1_4:-56060911 None:intergenic
AGGGCCAAACCCTTATTAGC+TGG 0.539562 1_4:+56060710 Msa0171350:CDS
CATTTAGCTGCGGGTCGTAA+CGG 0.539702 1_4:+56050244 Msa0171350:CDS
ATGTTAGTAACAGCTGGAGT+TGG 0.540275 1_4:-56059969 None:intergenic
GAACCTTACTCTTCCGCTTG+GGG 0.540635 1_4:+56050062 Msa0171350:CDS
CAACCTGTTTCACAGACAAA+CGG 0.541648 1_4:+56060020 Msa0171350:CDS
AGCTGAGGAGTTCCGTGTCA+AGG 0.546667 1_4:+56055288 Msa0171350:CDS
ACACAGATAGGTGCTGTTGA+AGG 0.547369 1_4:-56059807 None:intergenic
CTCTGCTTCCAGATTACCAG+TGG 0.549015 1_4:+56054098 Msa0171350:CDS
CATGTTAGTTCTGGCTCCGA+AGG 0.549605 1_4:+56055705 Msa0171350:CDS
ATGAGTTCCTTTACCCTGAA+GGG 0.549995 1_4:+56059099 Msa0171350:CDS
GAGCCTGAAAACGACAAGGA+TGG 0.549995 1_4:+56059912 Msa0171350:CDS
CATGATTGCAGCTGTCTCAA+AGG 0.550211 1_4:+56056960 Msa0171350:intron
TCATCATCGCGGCACTTCCA+AGG 0.550602 1_4:+56050094 Msa0171350:CDS
AGCCTGAAAACGACAAGGAT+GGG 0.550821 1_4:+56059913 Msa0171350:CDS
TGCAACACAGTACCAATCAA+TGG 0.553589 1_4:+56052404 Msa0171350:CDS
GTCATTATTTAAGAAGCTCA+CGG 0.554446 1_4:-56051673 None:intergenic
ACCAACATTTGCGTAGAGGA+TGG 0.555932 1_4:-56051896 None:intergenic
TATGAGTTCCTTTACCCTGA+AGG 0.558607 1_4:+56059098 Msa0171350:CDS
ACATCTTCTATTGCCAGCTC+AGG 0.562271 1_4:+56059177 Msa0171350:CDS
TTATTAAGAAGTCTCCTCCA+TGG 0.565283 1_4:+56052451 Msa0171350:CDS
ATTGATCAATATGTTGGAGA+AGG 0.569945 1_4:-56055453 None:intergenic
CTTCGGAGCCAGAACTAACA+TGG 0.570370 1_4:-56055704 None:intergenic
TGGAATTATTTACCTTGACA+CGG 0.575289 1_4:-56055300 None:intergenic
GGAAGAGTAAGGTTCGCCTA+TGG 0.576520 1_4:-56050054 None:intergenic
AATAGAAGATGTTGGTGTAA+GGG 0.578476 1_4:-56059166 None:intergenic
ATTTAATCTATGAGAAGGCA+TGG 0.578932 1_4:-56054131 None:intergenic
CTAACATTCAAGCAGATCAA+AGG 0.580404 1_4:+56059985 Msa0171350:CDS
TCTGTGTTTGAACTTTGAAG+AGG 0.582144 1_4:-56049886 None:intergenic
GCCATCCTCTACGCAAATGT+TGG 0.582787 1_4:+56051895 Msa0171350:CDS
TCCTTAATCTTATCAGACAA+TGG 0.583323 1_4:-56050648 None:intergenic
AAGGTTCGCCTATGGTGTAT+GGG 0.583468 1_4:-56050046 None:intergenic
CAATTTGGTTACACCCCGGA+TGG 0.583507 1_4:-56060794 None:intergenic
TGGGTTCCTGTATTTAAACA+TGG 0.586636 1_4:-56060892 None:intergenic
TCTACATCGACCGGTGACTG+GGG 0.587475 1_4:+56059864 Msa0171350:CDS
CCCCAAGAATCAATGGCCCA+TGG 0.591835 1_4:-56052468 None:intergenic
TCACGTTAATTTCAGGACGA+TGG 0.592141 1_4:+56050172 Msa0171350:intron
ATTAGTGTAATTAACAGCGA+AGG 0.596611 1_4:-56049933 None:intergenic
AACCAAATTGCCACTTGCCA+GGG 0.597146 1_4:+56060807 Msa0171350:exon
AGGGATGAATATTATGCTTG+GGG 0.600371 1_4:+56051630 Msa0171350:intron
CTACATCGACCGGTGACTGG+GGG 0.601175 1_4:+56059865 Msa0171350:CDS
ACAGTACCAATCAATGGAGC+TGG 0.601544 1_4:+56052410 Msa0171350:CDS
CTGCTGAATTTGGAAGCTTG+CGG 0.602423 1_4:-56055055 None:intergenic
GACAAATCTAGAGGCTACTG+AGG 0.602695 1_4:+56058719 Msa0171350:intron
TTATTAGCTGGCAGATGTCG+GGG 0.603167 1_4:+56060722 Msa0171350:CDS
TGCAAGCTACTTAAAAGAAG+GGG 0.604796 1_4:+56057363 Msa0171350:CDS
TTTGAAAGATAGTGTCGAGA+AGG 0.605218 1_4:+56055022 Msa0171350:CDS
CTGATAAAACATCAAAAGCG+TGG 0.606808 1_4:-56051853 None:intergenic
TCTGGAAGTAATGCTCAGGA+TGG 0.608159 1_4:+56050220 Msa0171350:CDS
TATTAAGAAGTCTCCTCCAT+GGG 0.608185 1_4:+56052452 Msa0171350:CDS
TTAACAATGCAGTCAAAGCG+GGG 0.608186 1_4:-56055246 None:intergenic
TGCTACTCTAGCATGTGGAA+AGG 0.613620 1_4:-56057542 None:intergenic
CTGAAAACGACAAGGATGGG+TGG 0.616271 1_4:+56059916 Msa0171350:CDS
TTTCCATTCAGCGATATGCA+TGG 0.619441 1_4:+56052376 Msa0171350:intron
GGTGTGGAATTTACACAGAT+AGG 0.620542 1_4:-56059819 None:intergenic
GCATGGACTTCAGCAACCAC+TGG 0.621047 1_4:-56054114 None:intergenic
TGAAAACGACAAGGATGGGT+GGG 0.623050 1_4:+56059917 Msa0171350:CDS
AATTACCAACATTTGCGTAG+AGG 0.624880 1_4:-56051900 None:intergenic
AACTACACCAAAGTTGAGCA+AGG 0.627445 1_4:+56060553 Msa0171350:CDS
GTGCTCACTGAAATCTGGTG+TGG 0.628815 1_4:-56059835 None:intergenic
GGAGCTGGCAAAATCTGACT+GGG 0.629468 1_4:+56052425 Msa0171350:CDS
GAGAAACCAGTAGCAACATG+AGG 0.635595 1_4:-56055643 None:intergenic
CACCGGTCGATGTAGAAGCA+TGG 0.636732 1_4:-56059857 None:intergenic
TTCTTTAACACAATCTGACG+AGG 0.643601 1_4:-56055086 None:intergenic
ACGCACAGCTCGATCATTGG+AGG 0.643851 1_4:-56055425 None:intergenic
AGCTCCTGCACCCACTACAA+GGG 0.647903 1_4:+56060691 Msa0171350:CDS
CGAGGAGCCTGAAAACGACA+AGG 0.649330 1_4:+56059908 Msa0171350:CDS
TCTCTTATAGACAAATCTAG+AGG 0.654381 1_4:+56058710 Msa0171350:intron
AACGATCTCCCATACACCAT+AGG 0.655019 1_4:+56050038 Msa0171350:CDS
CAACACTGCATCCATTCCCA+AGG 0.656429 1_4:+56053955 Msa0171350:CDS
TACATCGACCGGTGACTGGG+GGG 0.656652 1_4:+56059866 Msa0171350:CDS
GATAATCCGGACACCATCCG+GGG 0.659235 1_4:+56060781 Msa0171350:CDS
AGAAACCAGTAGCAACATGA+GGG 0.659703 1_4:-56055642 None:intergenic
GAACTTTGAAGAGGGAAACG+TGG 0.660316 1_4:-56049877 None:intergenic
ACATCACTGAAATTGCCACT+AGG 0.663088 1_4:+56057708 Msa0171350:CDS
CTCCAAAATTAGGTGCTCAG+CGG 0.663729 1_4:+56060759 Msa0171350:CDS
GGCTCTTGGCTTCATCATCG+CGG 0.665638 1_4:+56050083 Msa0171350:CDS
ATACCTGCTACTCTAGCATG+TGG 0.668905 1_4:-56057547 None:intergenic
GATGTCATAGTTGGAACTGG+TGG 0.673422 1_4:-56057690 None:intergenic
ACATTCAAGCAGATCAAAGG+CGG 0.675162 1_4:+56059988 Msa0171350:CDS
GTGGCAATTTGGTTACACCC+CGG 0.676908 1_4:-56060798 None:intergenic
TCAGGATGGACATTTAGCTG+CGG 0.676966 1_4:+56050234 Msa0171350:CDS
TGGTGTATGGGAGATCGTTG+AGG 0.677991 1_4:-56050034 None:intergenic
AACATTAGGAAGAATCCTAG+TGG 0.678386 1_4:-56057723 None:intergenic
CCTTAATAATGACACAGACA+AGG 0.679867 1_4:-56056984 None:intergenic
TAACAATGCAGTCAAAGCGG+GGG 0.685519 1_4:-56055245 None:intergenic
TTTGAAGTTGAGCAAAACAG+AGG 0.686400 1_4:+56053925 Msa0171350:CDS
AGTCTGTGTGACAACAACAC+TGG 0.687698 1_4:-56051816 None:intergenic
ACAAATCTAGAGGCTACTGA+GGG 0.693320 1_4:+56058720 Msa0171350:CDS
TAGGTCTTGAAGGTGCACAA+AGG 0.694786 1_4:+56050673 Msa0171350:CDS
ACTAGAGAATGGAATTGACG+AGG 0.706515 1_4:+56059890 Msa0171350:CDS
GAGCTGGCAATAGAAGATGT+TGG 0.718523 1_4:-56059174 None:intergenic
GCCAGGGCACAAAAGAAACG+AGG 0.719597 1_4:+56060823 Msa0171350:three_prime_UTR
ATGAAGCCAAGAGCCCCAAG+CGG 0.722990 1_4:-56050075 None:intergenic
CAAGAATCAATGGCCCATGG+AGG 0.724818 1_4:-56052465 None:intergenic
TCAAAGCTTATAGAGAACAG+TGG 0.726112 1_4:+56054157 Msa0171350:CDS
GATGAAGATGATGATTTGTG+CGG 0.742354 1_4:+56060575 Msa0171350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAATAAAGACAAA+CGG - chr1_4:56050993-56051012 None:intergenic 10.0%
!! AAAAATAAAATAAAGACAAA+CGG - chr1_4:56050993-56051012 None:intergenic 10.0%
!! ATAATAATTTATAACATTCA+CGG + chr1_4:56052208-56052227 Msa0171350:intron 10.0%
!!! TTATAATTTTTTTAAGTGAA+AGG + chr1_4:56052306-56052325 Msa0171350:intron 10.0%
!!! GATATTGATTTTATATTAAA+GGG + chr1_4:56054461-56054480 Msa0171350:intron 10.0%
!!! TTTTTAATTATGTCAATTTA+AGG + chr1_4:56056249-56056268 Msa0171350:intron 10.0%
!!! TCTTATTAATGTTTTTTTTT+GGG + chr1_4:56057200-56057219 Msa0171350:intron 10.0%
!!! TAAAAAATATTGATTAAAAG+AGG - chr1_4:56058256-56058275 None:intergenic 10.0%
!! TATATTATTAAATGAAGAAA+AGG + chr1_4:56059565-56059584 Msa0171350:intron 10.0%
!! ATATTATTAAATGAAGAAAA+GGG + chr1_4:56059566-56059585 Msa0171350:intron 10.0%
!! TTCAGTTAAATTATTAATTG+TGG + chr1_4:56050505-56050524 Msa0171350:intron 15.0%
!! ATAGAAATAGCTTATATATA+AGG + chr1_4:56051017-56051036 Msa0171350:intron 15.0%
!! TAGAAATAGCTTATATATAA+GGG + chr1_4:56051018-56051037 Msa0171350:intron 15.0%
!! ATATAAGGGTTTATATAATA+AGG + chr1_4:56051032-56051051 Msa0171350:intron 15.0%
!! TATAAGGGTTTATATAATAA+GGG + chr1_4:56051033-56051052 Msa0171350:intron 15.0%
!! ATAGAAATAGCTTATATATA+AGG + chr1_4:56051017-56051036 Msa0171350:intron 15.0%
!! TAGAAATAGCTTATATATAA+GGG + chr1_4:56051018-56051037 Msa0171350:intron 15.0%
!! ATATAAGGGTTTATATAATA+TGG + chr1_4:56051032-56051051 Msa0171350:intron 15.0%
!! TATAAGGGTTTATATAATAA+GGG + chr1_4:56051033-56051052 Msa0171350:intron 15.0%
!! TATCTTAAAATCTAGATAAA+GGG - chr1_4:56051994-56052013 None:intergenic 15.0%
!! ATATCTTAAAATCTAGATAA+AGG - chr1_4:56051995-56052014 None:intergenic 15.0%
!! AAATTTATAATGCATTATGA+TGG + chr1_4:56052524-56052543 Msa0171350:intron 15.0%
!! ATTTAAATATAATTCATGTG+TGG + chr1_4:56053570-56053589 Msa0171350:intron 15.0%
!!! TAGAATTTTAATGATTTAGA+GGG - chr1_4:56053868-56053887 None:intergenic 15.0%
!!! TTAGAATTTTAATGATTTAG+AGG - chr1_4:56053869-56053888 None:intergenic 15.0%
!! TAAATAAATAAAACAAAGGT+TGG - chr1_4:56053997-56054016 None:intergenic 15.0%
!!! GGATATTGATTTTATATTAA+AGG + chr1_4:56054460-56054479 Msa0171350:intron 15.0%
!!! ATTCTAATGTAAATTGATTT+TGG + chr1_4:56054748-56054767 Msa0171350:intron 15.0%
!! AATTGACATAATTAAAAATG+AGG - chr1_4:56056247-56056266 None:intergenic 15.0%
!!! TTTTGAATTTTTGATTGAAA+TGG + chr1_4:56057172-56057191 Msa0171350:intron 15.0%
!!! GTCTTATTAATGTTTTTTTT+TGG + chr1_4:56057199-56057218 Msa0171350:intron 15.0%
!!! CTTATTAATGTTTTTTTTTG+GGG + chr1_4:56057201-56057220 Msa0171350:intron 15.0%
!!! TTATTAATGTTTTTTTTTGG+GGG + chr1_4:56057202-56057221 Msa0171350:intron 15.0%
!!! AAGGAATTTTGAAATTTAAA+GGG - chr1_4:56058194-56058213 None:intergenic 15.0%
!! TAGATATGAAAAACAAATTT+AGG - chr1_4:56058286-56058305 None:intergenic 15.0%
!!! ATGACATGTTTAAAATTATT+AGG - chr1_4:56058309-56058328 None:intergenic 15.0%
!! AACAACAAAAAAATAACAAA+TGG - chr1_4:56058480-56058499 None:intergenic 15.0%
!!! TTTTAGATTGTATAGAATTT+TGG + chr1_4:56058800-56058819 Msa0171350:intron 15.0%
!! TATTATTAAATGAAGAAAAG+GGG + chr1_4:56059567-56059586 Msa0171350:intron 15.0%
!!! TAATTATTCAACTGTTATTT+TGG + chr1_4:56060046-56060065 Msa0171350:intron 15.0%
!!! TTTAAAGATTTTGATGTTTT+TGG - chr1_4:56060620-56060639 None:intergenic 15.0%
!!! AAATTCTTCAAAGATTTTGT+AGG + chr1_4:56049996-56050015 Msa0171350:CDS 20.0%
!! GATAATGAAAAAATTGAAAC+CGG - chr1_4:56050202-56050221 None:intergenic 20.0%
!!! GTTTCAATTTTTTCATTATC+TGG + chr1_4:56050202-56050221 Msa0171350:CDS 20.0%
!!! TTTTGTTTCCTATGAATTTA+AGG + chr1_4:56050794-56050813 Msa0171350:intron 20.0%
!! TTTGTTTCCTATGAATTTAA+GGG + chr1_4:56050795-56050814 Msa0171350:intron 20.0%
!! TATCAAACAGTTTAACTAAA+CGG - chr1_4:56051071-56051090 None:intergenic 20.0%
!! GTATAAGGGTTTATATAATA+AGG + chr1_4:56051309-56051328 Msa0171350:intron 20.0%
!! ATCTTAAAATCTAGATAAAG+GGG - chr1_4:56051993-56052012 None:intergenic 20.0%
!! ATCTACAAATCATAATAACT+AGG - chr1_4:56053798-56053817 None:intergenic 20.0%
!!! AGAATTTTAATGATTTAGAG+GGG - chr1_4:56053867-56053886 None:intergenic 20.0%
!! CATTAAAATTCTAATTTCGT+AGG + chr1_4:56053875-56053894 Msa0171350:intron 20.0%
!! ATCAACTATATTCATGTATA+AGG + chr1_4:56054305-56054324 Msa0171350:intron 20.0%
!!! AATTTTGACTTGTTATATCT+TGG + chr1_4:56054336-56054355 Msa0171350:intron 20.0%
!!! CATGATAATATTTGGTAATT+AGG + chr1_4:56054415-56054434 Msa0171350:intron 20.0%
!!! TATTTTATTCAAGACAAGTA+AGG + chr1_4:56054535-56054554 Msa0171350:intron 20.0%
!!! AAAGTATTATATGTGTATCT+AGG + chr1_4:56054684-56054703 Msa0171350:intron 20.0%
!! AAGTATTATATGTGTATCTA+GGG + chr1_4:56054685-56054704 Msa0171350:intron 20.0%
!!! AGAGTATTTTCAAAATAAGT+TGG + chr1_4:56054968-56054987 Msa0171350:intron 20.0%
!!! TATTAGTCTAATGAGATATT+TGG + chr1_4:56055796-56055815 Msa0171350:intron 20.0%
!!! TTCAATTTGTATGTCATTTT+TGG + chr1_4:56056514-56056533 Msa0171350:intron 20.0%
!!! TTCACTAACAAATATTTTGA+GGG - chr1_4:56056797-56056816 None:intergenic 20.0%
!!! AAGAACATTTCCTTTTTAAT+GGG - chr1_4:56056821-56056840 None:intergenic 20.0%
!! AAAATTGACAGTCAAATTAT+CGG - chr1_4:56057156-56057175 None:intergenic 20.0%
!!! TATTAATGTTTTTTTTTGGG+GGG + chr1_4:56057203-56057222 Msa0171350:intron 20.0%
!! TGATAGTATCATATATTCAT+CGG + chr1_4:56057437-56057456 Msa0171350:intron 20.0%
!!! AGGAATTTTGAAATTTAAAG+GGG - chr1_4:56058193-56058212 None:intergenic 20.0%
!!! GAAGGAATTTTGAAATTTAA+AGG - chr1_4:56058195-56058214 None:intergenic 20.0%
!! ACAATATAAAAAGCTAGTAA+AGG - chr1_4:56058347-56058366 None:intergenic 20.0%
!!! TTATCAAAATTTTAAACCAC+TGG + chr1_4:56058373-56058392 Msa0171350:intron 20.0%
!! AAAATAACAAATGGTATAGA+TGG - chr1_4:56058471-56058490 None:intergenic 20.0%
!! ATATAATGTGATTCAGATAT+GGG - chr1_4:56058580-56058599 None:intergenic 20.0%
!! TCAGGTTTAATATTAAAGAA+AGG + chr1_4:56058908-56058927 Msa0171350:intron 20.0%
!!! ATATAGCAAGTTTGATTTTT+GGG - chr1_4:56059520-56059539 None:intergenic 20.0%
!!! ACTGTTTATATTCTCTTTTT+TGG + chr1_4:56059764-56059783 Msa0171350:intron 20.0%
!!! CTGTTTATATTCTCTTTTTT+GGG + chr1_4:56059765-56059784 Msa0171350:intron 20.0%
!!! AAATTTTCAATGTCATACAT+TGG + chr1_4:56060111-56060130 Msa0171350:intron 20.0%
!! AAGATATTGTCATTATTCAT+GGG - chr1_4:56060155-56060174 None:intergenic 20.0%
!! TAAGATATTGTCATTATTCA+TGG - chr1_4:56060156-56060175 None:intergenic 20.0%
!!! TCATGTTTTCACTTAATTAT+TGG + chr1_4:56060218-56060237 Msa0171350:intron 20.0%
!!! TTTTCACTTAATTATTGGAT+AGG + chr1_4:56060223-56060242 Msa0171350:intron 20.0%
!!! AATTCAAAGTTGATTTCATA+GGG - chr1_4:56060283-56060302 None:intergenic 20.0%
!!! AAATTCAAAGTTGATTTCAT+AGG - chr1_4:56060284-56060303 None:intergenic 20.0%
!! AGTAATTTGATATACTAGAT+GGG - chr1_4:56060914-56060933 None:intergenic 20.0%
!! AAGTAATTTGATATACTAGA+TGG - chr1_4:56060915-56060934 None:intergenic 20.0%
!! ATAATTGATTGTTGTTACCT+TGG - chr1_4:56050114-56050133 None:intergenic 25.0%
! ACTAATTTCACGTTAATTTC+AGG + chr1_4:56050165-56050184 Msa0171350:intron 25.0%
!!! ATTGTGGTTTTTTTCTTTAC+AGG + chr1_4:56050521-56050540 Msa0171350:intron 25.0%
! TGAAGAAACGACAAAATATT+CGG - chr1_4:56050555-56050574 None:intergenic 25.0%
!!! AATAAAGTGTGTTTTGTTAG+TGG + chr1_4:56050749-56050768 Msa0171350:intron 25.0%
!! TTGTTGTTGTTGTTGTATAA+GGG + chr1_4:56051295-56051314 Msa0171350:intron 25.0%
! AGACAAACAGTTTAACTAAA+CGG - chr1_4:56051348-56051367 None:intergenic 25.0%
!!! TGCTTATTTTATTCACTTTG+TGG + chr1_4:56051601-56051620 Msa0171350:intron 25.0%
!!! GCTTATTTTATTCACTTTGT+GGG + chr1_4:56051602-56051621 Msa0171350:intron 25.0%
!!! CTTATTTTATTCACTTTGTG+GGG + chr1_4:56051603-56051622 Msa0171350:intron 25.0%
!! ATGTTTTATCAGAGTTTGAT+GGG + chr1_4:56051864-56051883 Msa0171350:CDS 25.0%
! GAATGGAAGGAATATATATT+AGG - chr1_4:56052348-56052367 None:intergenic 25.0%
! GCAATACAACAATATTGAAT+GGG - chr1_4:56052844-56052863 None:intergenic 25.0%
! TGCAATACAACAATATTGAA+TGG - chr1_4:56052845-56052864 None:intergenic 25.0%
! TTCAATATTGTTGTATTGCA+TGG + chr1_4:56052845-56052864 Msa0171350:intron 25.0%
! GGAACTTATGAATTTATACT+TGG + chr1_4:56052912-56052931 Msa0171350:intron 25.0%
!! CACGTAACATATTAAGTTTT+CGG + chr1_4:56052938-56052957 Msa0171350:intron 25.0%
!! ACGTAACATATTAAGTTTTC+GGG + chr1_4:56052939-56052958 Msa0171350:intron 25.0%
! ACATGTTATCAAAGCTTATA+AGG + chr1_4:56052983-56053002 Msa0171350:intron 25.0%
!!! CTTTTAACTAGCATAATTTG+GGG - chr1_4:56053042-56053061 None:intergenic 25.0%
!!! CCTTTTAACTAGCATAATTT+GGG - chr1_4:56053043-56053062 None:intergenic 25.0%
! CCAAATTATGCTAGTTAAAA+GGG + chr1_4:56053041-56053060 Msa0171350:intron 25.0%
!!! AATTTTAACTGGCAGAATTT+GGG - chr1_4:56053251-56053270 None:intergenic 25.0%
!!! TGCTGAAATTCAATTTTAAC+TGG - chr1_4:56053262-56053281 None:intergenic 25.0%
! TTAAAATTGAATTTCAGCAG+AGG + chr1_4:56053263-56053282 Msa0171350:intron 25.0%
!!! TTTAGACCATCTTTTTTTGT+GGG + chr1_4:56053316-56053335 Msa0171350:intron 25.0%
!!! CACAAAAGTTTTAGTTGTTA+GGG - chr1_4:56053413-56053432 None:intergenic 25.0%
!!! TCACAAAAGTTTTAGTTGTT+AGG - chr1_4:56053414-56053433 None:intergenic 25.0%
! GAATGAATACTTCATTAGAA+TGG - chr1_4:56054042-56054061 None:intergenic 25.0%
! GATGTATTTAATCTATGAGA+AGG - chr1_4:56054139-56054158 None:intergenic 25.0%
! GAGAGTTTCATGATAATATT+TGG + chr1_4:56054407-56054426 Msa0171350:intron 25.0%
!!! TTTTGAAAGTACCCATTTTT+GGG + chr1_4:56054881-56054900 Msa0171350:intron 25.0%
! TATATCTTAACCCCAAAAAT+GGG - chr1_4:56054895-56054914 None:intergenic 25.0%
! TTATATCTTAACCCCAAAAA+TGG - chr1_4:56054896-56054915 None:intergenic 25.0%
!!! TTTATCCCAATTGATTTTGT+CGG + chr1_4:56055157-56055176 Msa0171350:intron 25.0%
! AAATACCGACAAAATCAATT+GGG - chr1_4:56055165-56055184 None:intergenic 25.0%
! AAAATACCGACAAAATCAAT+TGG - chr1_4:56055166-56055185 None:intergenic 25.0%
!! TTGATTTTGTCGGTATTTTT+TGG + chr1_4:56055167-56055186 Msa0171350:intron 25.0%
! TTGACTGCATTGTTAAAAAT+TGG + chr1_4:56055253-56055272 Msa0171350:CDS 25.0%
! GCAAAGAGTTTAATTATTGT+TGG - chr1_4:56055406-56055425 None:intergenic 25.0%
! AAAAAAAAAGTAGGGAAGTA+AGG - chr1_4:56055547-56055566 None:intergenic 25.0%
! ACAGCAAGAAAAAAAAAGTA+GGG - chr1_4:56055555-56055574 None:intergenic 25.0%
! TACAGCAAGAAAAAAAAAGT+AGG - chr1_4:56055556-56055575 None:intergenic 25.0%
! AATATAAACAGACATACCTT+CGG - chr1_4:56055724-56055743 None:intergenic 25.0%
!!! GCATTGATTCTATTTGAAAA+AGG + chr1_4:56055765-56055784 Msa0171350:intron 25.0%
! TATCTTATCTAGTTAAGTAG+AGG + chr1_4:56056423-56056442 Msa0171350:intron 25.0%
! AAAGTGACTTCAAAATTTGA+AGG - chr1_4:56056548-56056567 None:intergenic 25.0%
! TGTGAATGAAAATAGATGTT+TGG - chr1_4:56056627-56056646 None:intergenic 25.0%
! TTTGAAAAACTAACACCAAT+AGG - chr1_4:56056704-56056723 None:intergenic 25.0%
!!! AACAAATATTTTGAGGGATT+CGG - chr1_4:56056791-56056810 None:intergenic 25.0%
!! GTTCACTAACAAATATTTTG+AGG - chr1_4:56056798-56056817 None:intergenic 25.0%
!! AGAACATTTCCTTTTTAATG+GGG - chr1_4:56056820-56056839 None:intergenic 25.0%
!! CAAGAACATTTCCTTTTTAA+TGG - chr1_4:56056822-56056841 None:intergenic 25.0%
! ATAGAAGAGAAAATTTAGGA+GGG - chr1_4:56056887-56056906 None:intergenic 25.0%
! AATAGAAGAGAAAATTTAGG+AGG - chr1_4:56056888-56056907 None:intergenic 25.0%
!! TCCTAAATTTTCTCTTCTAT+TGG + chr1_4:56056887-56056906 Msa0171350:intron 25.0%
! TCCAATAGAAGAGAAAATTT+AGG - chr1_4:56056891-56056910 None:intergenic 25.0%
! TCTTTAACGATAAATGTGTT+GGG + chr1_4:56057038-56057057 Msa0171350:intron 25.0%
! TAAATAATAAATCACCTGTC+AGG - chr1_4:56057767-56057786 None:intergenic 25.0%
! AATGATCTACAAATAGGAAA+GGG - chr1_4:56057805-56057824 None:intergenic 25.0%
!! ATAATCACAGCATTGAAAAT+GGG - chr1_4:56057853-56057872 None:intergenic 25.0%
!! TGACATGTGTTATTCTTTAA+TGG - chr1_4:56058160-56058179 None:intergenic 25.0%
!!! AATTATTCCACATGTTTTTG+TGG + chr1_4:56058547-56058566 Msa0171350:intron 25.0%
!!! ATTATTCCACATGTTTTTGT+GGG + chr1_4:56058548-56058567 Msa0171350:intron 25.0%
! TATAATGTGATTCAGATATG+GGG - chr1_4:56058579-56058598 None:intergenic 25.0%
! CATATAATGTGATTCAGATA+TGG - chr1_4:56058581-56058600 None:intergenic 25.0%
! AACAAAAATTACCAATAGAG+GGG - chr1_4:56058663-56058682 None:intergenic 25.0%
! GAACAAAAATTACCAATAGA+GGG - chr1_4:56058664-56058683 None:intergenic 25.0%
!!! ACAAGATTTTGATACAAAGA+AGG - chr1_4:56059292-56059311 None:intergenic 25.0%
!! TCTGAAGTTATATAGATGAT+CGG - chr1_4:56059377-56059396 None:intergenic 25.0%
! AAACACAGAATCATTTAGAA+TGG + chr1_4:56059484-56059503 Msa0171350:intron 25.0%
!!! GATATAGCAAGTTTGATTTT+TGG - chr1_4:56059521-56059540 None:intergenic 25.0%
!!! AAAATCAAACTTGCTATATC+TGG + chr1_4:56059521-56059540 Msa0171350:intron 25.0%
!!! AAATCAAACTTGCTATATCT+GGG + chr1_4:56059522-56059541 Msa0171350:intron 25.0%
! ATGACAATATCTTAAGAAAG+TGG + chr1_4:56060162-56060181 Msa0171350:intron 25.0%
! ATTAAGTGAAAACATGAACT+AGG - chr1_4:56060215-56060234 None:intergenic 25.0%
!! TTGAATTTTTGCTTTATGCA+AGG + chr1_4:56060296-56060315 Msa0171350:intron 25.0%
!! AAAATTCCTTTTGCATTTGA+TGG - chr1_4:56060428-56060447 None:intergenic 25.0%
! AGGTACATGAATTAAGATAT+GGG - chr1_4:56060455-56060474 None:intergenic 25.0%
! AAAAATCTCAAGTACATCAA+CGG + chr1_4:56060996-56061015 Msa0171350:three_prime_UTR 25.0%
ATTAGTGTAATTAACAGCGA+AGG - chr1_4:56049936-56049955 None:intergenic 30.0%
! AAAGATTTTGTAGGTGTATC+CGG + chr1_4:56050005-56050024 Msa0171350:CDS 30.0%
!!! GGTTTTTTTCTTTACAGGTT+AGG + chr1_4:56050526-56050545 Msa0171350:intron 30.0%
ACCATCAAAAGTTTCAATCT+CGG - chr1_4:56050583-56050602 None:intergenic 30.0%
TCCTTAATCTTATCAGACAA+TGG - chr1_4:56050651-56050670 None:intergenic 30.0%
TCTGATAAGATTAAGGAGTT+AGG + chr1_4:56050654-56050673 Msa0171350:CDS 30.0%
AAACATGCCCTTAAATTCAT+AGG - chr1_4:56050805-56050824 None:intergenic 30.0%
!! ATGAATTTAAGGGCATGTTT+TGG + chr1_4:56050805-56050824 Msa0171350:intron 30.0%
TGGTCTTTGATAGAACATTA+TGG + chr1_4:56051224-56051243 Msa0171350:intron 30.0%
TCTTTGATAGAACATTATGG+CGG + chr1_4:56051227-56051246 Msa0171350:intron 30.0%
! GTTGTTGTTGTTGTTGTATA+AGG + chr1_4:56051294-56051313 Msa0171350:intron 30.0%
TTAAACTGTTTGTCTAGTCA+TGG + chr1_4:56051353-56051372 Msa0171350:intron 30.0%
TATCTAGATTACAGAGAATG+AGG + chr1_4:56051545-56051564 Msa0171350:intron 30.0%
ATCTAGATTACAGAGAATGA+GGG + chr1_4:56051546-56051565 Msa0171350:intron 30.0%
TAGGGATGAATATTATGCTT+GGG + chr1_4:56051629-56051648 Msa0171350:intron 30.0%
GTCATTATTTAAGAAGCTCA+CGG - chr1_4:56051676-56051695 None:intergenic 30.0%
! GATGTTTTATCAGAGTTTGA+TGG + chr1_4:56051863-56051882 Msa0171350:CDS 30.0%
TAAAATCTAGATAAAGGGGA+AGG - chr1_4:56051989-56052008 None:intergenic 30.0%
CAATAAACTTTCACCTTATG+TGG - chr1_4:56052049-56052068 None:intergenic 30.0%
ATTATTGATGCTCCCTTAAA+TGG + chr1_4:56052245-56052264 Msa0171350:intron 30.0%
GAATGGAAAACATCAAAGAA+TGG - chr1_4:56052365-56052384 None:intergenic 30.0%
AATAGATCCATATTCAGTAG+TGG + chr1_4:56052644-56052663 Msa0171350:intron 30.0%
ATAGATCCATATTCAGTAGT+GGG + chr1_4:56052645-56052664 Msa0171350:intron 30.0%
!! GGTTTTACTTTTACCCTTTT+GGG + chr1_4:56052666-56052685 Msa0171350:intron 30.0%
!! GTTTTACTTTTACCCTTTTG+GGG + chr1_4:56052667-56052686 Msa0171350:intron 30.0%
!! TTTTACTTTTACCCTTTTGG+GGG + chr1_4:56052668-56052687 Msa0171350:intron 30.0%
ACTATTATGGAACTTGTGAA+CGG + chr1_4:56052873-56052892 Msa0171350:intron 30.0%
CCCAAATTATGCTAGTTAAA+AGG + chr1_4:56053040-56053059 Msa0171350:intron 30.0%
!! CCCTTTTAACTAGCATAATT+TGG - chr1_4:56053044-56053063 None:intergenic 30.0%
!!! CAATTTTAACTGGCAGAATT+TGG - chr1_4:56053252-56053271 None:intergenic 30.0%
!!! CTTTAGACCATCTTTTTTTG+TGG + chr1_4:56053315-56053334 Msa0171350:intron 30.0%
ATAAGTCCCACAAAAAAAGA+TGG - chr1_4:56053325-56053344 None:intergenic 30.0%
ATTGCACCAAAACAAGTATA+AGG - chr1_4:56053445-56053464 None:intergenic 30.0%
AATCGTACATATGTTCAATC+AGG - chr1_4:56053652-56053671 None:intergenic 30.0%
GAAACATTCATCATTGTTAG+AGG + chr1_4:56053678-56053697 Msa0171350:intron 30.0%
!! CTTATCTTAGAGCATCTTTT+AGG + chr1_4:56053757-56053776 Msa0171350:intron 30.0%
ATTTAATCTATGAGAAGGCA+TGG - chr1_4:56054134-56054153 None:intergenic 30.0%
! TGAAAGATTCATGTGTTTTG+TGG + chr1_4:56054261-56054280 Msa0171350:intron 30.0%
! GGTTAGCTAATAAGCTATAT+AGG + chr1_4:56054282-56054301 Msa0171350:intron 30.0%
!! GACTTGTTATATCTTGGTAT+TGG + chr1_4:56054342-56054361 Msa0171350:intron 30.0%
!! GTATTGGAGTTCTTGTTATT+AGG + chr1_4:56054358-56054377 Msa0171350:intron 30.0%
!! AGTTCTTGTTATTAGGCTTT+AGG + chr1_4:56054365-56054384 Msa0171350:intron 30.0%
! ATATTAAAGGGTTTCTGAGA+TGG + chr1_4:56054473-56054492 Msa0171350:intron 30.0%
!!! ATTTTGGCTTTTCCACATTT+TGG + chr1_4:56054764-56054783 Msa0171350:intron 30.0%
ATTGGTTATGATTGTTCAAG+TGG - chr1_4:56054839-56054858 None:intergenic 30.0%
TTCAAAACAAGAAAAGCAAC+TGG - chr1_4:56054868-56054887 None:intergenic 30.0%
!!! GTTTTGAAAGTACCCATTTT+TGG + chr1_4:56054880-56054899 Msa0171350:intron 30.0%
!!! TTTGAAAGTACCCATTTTTG+GGG + chr1_4:56054882-56054901 Msa0171350:intron 30.0%
AACAAACTCAAACTAAACAC+AGG - chr1_4:56054934-56054953 None:intergenic 30.0%
!! TGTGTTTAGTTTGAGTTTGT+TGG + chr1_4:56054933-56054952 Msa0171350:intron 30.0%
! TTTTAACAATGCAGTCAAAG+CGG - chr1_4:56055251-56055270 None:intergenic 30.0%
! CATTGTTAAAAATTGGTTCC+TGG + chr1_4:56055260-56055279 Msa0171350:CDS 30.0%
TGGAATTATTTACCTTGACA+CGG - chr1_4:56055303-56055322 None:intergenic 30.0%
ATTGATCAATATGTTGGAGA+AGG - chr1_4:56055456-56055475 None:intergenic 30.0%
CTCCAACATATTGATCAATA+TGG + chr1_4:56055457-56055476 Msa0171350:CDS 30.0%
CTCCATATTGATCAATATGT+TGG - chr1_4:56055462-56055481 None:intergenic 30.0%
TATACTAATGCGTTAGAAGT+TGG - chr1_4:56056147-56056166 None:intergenic 30.0%
AATAAACTTCACAATCACCA+GGG - chr1_4:56056174-56056193 None:intergenic 30.0%
TAATAAACTTCACAATCACC+AGG - chr1_4:56056175-56056194 None:intergenic 30.0%
! CTGTTCTATTTAAGCTTTGA+TGG + chr1_4:56056206-56056225 Msa0171350:intron 30.0%
ACAGTCAGTTTGGTTAAATA+AGG - chr1_4:56056666-56056685 None:intergenic 30.0%
!!! ATTGGTTTTTTTCTCTTGGT+TGG - chr1_4:56056756-56056775 None:intergenic 30.0%
ACCAAGAGAAAAAAACCAAT+CGG + chr1_4:56056756-56056775 Msa0171350:intron 30.0%
AAAATTTAGGAGGGCTAAAA+AGG - chr1_4:56056878-56056897 None:intergenic 30.0%
CTCTTTAACGATAAATGTGT+TGG + chr1_4:56057037-56057056 Msa0171350:intron 30.0%
ATTGCAAGCTACTTAAAAGA+AGG + chr1_4:56057361-56057380 Msa0171350:CDS 30.0%
TTGCAAGCTACTTAAAAGAA+GGG + chr1_4:56057362-56057381 Msa0171350:CDS 30.0%
TCAAGATACAAAATGATGAG+AGG - chr1_4:56057645-56057664 None:intergenic 30.0%
! CATTTTGTATCTTGATTGTC+AGG + chr1_4:56057650-56057669 Msa0171350:intron 30.0%
AATTTCAGTGATGTCATAGT+TGG - chr1_4:56057702-56057721 None:intergenic 30.0%
ATTGTGAGTACAACAACATT+AGG - chr1_4:56057740-56057759 None:intergenic 30.0%
GAATGATCTACAAATAGGAA+AGG - chr1_4:56057806-56057825 None:intergenic 30.0%
GAAGAGAATGATCTACAAAT+AGG - chr1_4:56057811-56057830 None:intergenic 30.0%
TGAAAATGGGAAATATGCAA+AGG - chr1_4:56057840-56057859 None:intergenic 30.0%
! CATAATCACAGCATTGAAAA+TGG - chr1_4:56057854-56057873 None:intergenic 30.0%
GACAAAGCAACATTATGAAA+AGG + chr1_4:56057946-56057965 Msa0171350:CDS 30.0%
!! TACTTTTTAAACCCAACTTC+TGG + chr1_4:56058060-56058079 Msa0171350:intron 30.0%
AATACATGAAACCAGAAGTT+GGG - chr1_4:56058074-56058093 None:intergenic 30.0%
TAATACATGAAACCAGAAGT+TGG - chr1_4:56058075-56058094 None:intergenic 30.0%
!! TAAGACGTTGATTCAAAAGA+AGG - chr1_4:56058213-56058232 None:intergenic 30.0%
ATCACATGTGAAGGATAAAT+AGG - chr1_4:56058429-56058448 None:intergenic 30.0%
AGATGGTAAAATTGTGTGAT+TGG - chr1_4:56058454-56058473 None:intergenic 30.0%
!! GAGAAAAAAGCCATTTTATC+AGG + chr1_4:56058500-56058519 Msa0171350:intron 30.0%
CAAGAAATCTCCTGATAAAA+TGG - chr1_4:56058513-56058532 None:intergenic 30.0%
! ATTTTTCTTTTCCCCTCTAT+TGG + chr1_4:56058649-56058668 Msa0171350:intron 30.0%
GGAACAAAAATTACCAATAG+AGG - chr1_4:56058665-56058684 None:intergenic 30.0%
TCTCTTATAGACAAATCTAG+AGG + chr1_4:56058710-56058729 Msa0171350:intron 30.0%
ATTAATTACCTTTCCTAGAG+CGG - chr1_4:56058889-56058908 None:intergenic 30.0%
TCTAGGAAAGGTAATTAATC+AGG + chr1_4:56058890-56058909 Msa0171350:intron 30.0%
! GTGTTGTCTATATAGTCTTA+AGG + chr1_4:56058945-56058964 Msa0171350:intron 30.0%
TTTCTCCATATCTAATCCTT+TGG + chr1_4:56059041-56059060 Msa0171350:intron 30.0%
AATAGAAGATGTTGGTGTAA+GGG - chr1_4:56059169-56059188 None:intergenic 30.0%
CTGAAGTTATATAGATGATC+GGG - chr1_4:56059376-56059395 None:intergenic 30.0%
TTACTTCACTAATTGTACAC+CGG - chr1_4:56059466-56059485 None:intergenic 30.0%
ATCATTAACAGATCAGATGA+AGG - chr1_4:56059686-56059705 None:intergenic 30.0%
TTCATCTGATCTGTTAATGA+TGG + chr1_4:56059685-56059704 Msa0171350:intron 30.0%
!! ATAATTTGTTCTGCAGATTC+AGG + chr1_4:56059709-56059728 Msa0171350:intron 30.0%
GTAAAAAATGTACCCATACA+AGG - chr1_4:56059741-56059760 None:intergenic 30.0%
CAATATCTTAAGAAAGTGGA+TGG + chr1_4:56060166-56060185 Msa0171350:intron 30.0%
! AAAGTTGATTTCATAGGGAA+AGG - chr1_4:56060278-56060297 None:intergenic 30.0%
! ATTTTTGCTTTATGCAAGGA+TGG + chr1_4:56060300-56060319 Msa0171350:intron 30.0%
!! ATGCTGCTTCCATTTTATAT+AGG + chr1_4:56060368-56060387 Msa0171350:intron 30.0%
ACATTTCCATCAAATGCAAA+AGG + chr1_4:56060419-56060438 Msa0171350:intron 30.0%
GGTACATGAATTAAGATATG+GGG - chr1_4:56060454-56060473 None:intergenic 30.0%
CAGGTACATGAATTAAGATA+TGG - chr1_4:56060456-56060475 None:intergenic 30.0%
CATATCTTAATTCATGTACC+TGG + chr1_4:56060454-56060473 Msa0171350:intron 30.0%
!!! GTAGGTTTTTTTTCTTCTTG+TGG + chr1_4:56060859-56060878 Msa0171350:three_prime_UTR 30.0%
!!! GTTTTTTTTCTTCTTGTGGT+GGG + chr1_4:56060863-56060882 Msa0171350:three_prime_UTR 30.0%
TGGTAACCATGTTTAAATAC+AGG + chr1_4:56060886-56060905 Msa0171350:three_prime_UTR 30.0%
! CTGTGTTTGAACTTTGAAGA+GGG - chr1_4:56049888-56049907 None:intergenic 35.0%
! TCTGTGTTTGAACTTTGAAG+AGG - chr1_4:56049889-56049908 None:intergenic 35.0%
ATTATCTGGAAGTAATGCTC+AGG + chr1_4:56050216-56050235 Msa0171350:CDS 35.0%
ACACAATCGATTAGAAATGC+TGG - chr1_4:56050348-56050367 None:intergenic 35.0%
! ATTTGCAATTGTGTCACTGT+CGG - chr1_4:56050415-56050434 None:intergenic 35.0%
!! AGCATTGATACAAACAACAC+TGG - chr1_4:56050478-56050497 None:intergenic 35.0%
! ACCGAGATTGAAACTTTTGA+TGG + chr1_4:56050579-56050598 Msa0171350:CDS 35.0%
! GAGATTGAAACTTTTGATGG+TGG + chr1_4:56050582-56050601 Msa0171350:CDS 35.0%
TTATCAGACAATGGCATTAC+AGG - chr1_4:56050642-56050661 None:intergenic 35.0%
GCCATTGTCTGATAAGATTA+AGG + chr1_4:56050647-56050666 Msa0171350:CDS 35.0%
ATTAAGGAGTTAGGTCTTGA+AGG + chr1_4:56050663-56050682 Msa0171350:CDS 35.0%
TAGTGGTTGAATTCGTGAAA+TGG + chr1_4:56050766-56050785 Msa0171350:intron 35.0%
!!! GCTTTTTTCATGAGCTATCA+TGG - chr1_4:56050952-56050971 None:intergenic 35.0%
AAAAAAGCTTAGCGCTTACA+TGG + chr1_4:56050964-56050983 Msa0171350:intron 35.0%
!!! GCTTTTTTCATGAGCTATCA+TGG - chr1_4:56050952-56050971 None:intergenic 35.0%
AAAAAAGCTTAGCGCTTACA+TGG + chr1_4:56050964-56050983 Msa0171350:intron 35.0%
GTGTGAGCAATGTTATATGT+AGG + chr1_4:56051395-56051414 Msa0171350:intron 35.0%
TATGTAGGTTACATAGCATG+AGG + chr1_4:56051410-56051429 Msa0171350:intron 35.0%
ATGTAGGTTACATAGCATGA+GGG + chr1_4:56051411-56051430 Msa0171350:intron 35.0%
GTAGGGATGAATATTATGCT+TGG + chr1_4:56051628-56051647 Msa0171350:intron 35.0%
AGGGATGAATATTATGCTTG+GGG + chr1_4:56051630-56051649 Msa0171350:intron 35.0%
AGTATTCATGAGCTAAGTCT+GGG + chr1_4:56051708-56051727 Msa0171350:intron 35.0%
! CTTTGTTTGTTGCAGATTCA+TGG + chr1_4:56051779-56051798 Msa0171350:intron 35.0%
! GATTCATGGTAATGTTTGCT+TGG + chr1_4:56051793-56051812 Msa0171350:intron 35.0%
CTGATAAAACATCAAAAGCG+TGG - chr1_4:56051856-56051875 None:intergenic 35.0%
AATTACCAACATTTGCGTAG+AGG - chr1_4:56051903-56051922 None:intergenic 35.0%
CTGAAGCTAACAAGAAAACA+AGG - chr1_4:56051943-56051962 None:intergenic 35.0%
AAATAACCACTCTCCACATA+AGG + chr1_4:56052033-56052052 Msa0171350:intron 35.0%
!! GTCATGATTTTAGAAAGCCA+TGG + chr1_4:56052068-56052087 Msa0171350:intron 35.0%
GCGAAAGAGACAAACTTAAA+AGG - chr1_4:56052094-56052113 None:intergenic 35.0%
CAGCATAAACCTCCATTTAA+GGG - chr1_4:56052260-56052279 None:intergenic 35.0%
GGAAAACATCAAAGAATGGA+AGG - chr1_4:56052361-56052380 None:intergenic 35.0%
TTATTAAGAAGTCTCCTCCA+TGG + chr1_4:56052451-56052470 Msa0171350:CDS 35.0%
TATTAAGAAGTCTCCTCCAT+GGG + chr1_4:56052452-56052471 Msa0171350:CDS 35.0%
GGAAATTTGCAATGAAGACT+TGG + chr1_4:56052545-56052564 Msa0171350:intron 35.0%
TGATTCAACAACCCTAATCT+AGG - chr1_4:56052607-56052626 None:intergenic 35.0%
GTAAAACCCACTACTGAATA+TGG - chr1_4:56052654-56052673 None:intergenic 35.0%
!! GGGTTTTACTTTTACCCTTT+TGG + chr1_4:56052665-56052684 Msa0171350:intron 35.0%
TCCAAATTGCCGTCATAAAA+GGG - chr1_4:56052728-56052747 None:intergenic 35.0%
TTCCAAATTGCCGTCATAAA+AGG - chr1_4:56052729-56052748 None:intergenic 35.0%
! TGACGGCAATTTGGAATATT+AGG + chr1_4:56052733-56052752 Msa0171350:intron 35.0%
! GGCAATTTGGAATATTAGGA+GGG + chr1_4:56052737-56052756 Msa0171350:intron 35.0%
!! CTTGCTGTATTGTTGCATTT+TGG + chr1_4:56052775-56052794 Msa0171350:intron 35.0%
CACAAGTTCCATAATAGTCA+TGG - chr1_4:56052871-56052890 None:intergenic 35.0%
CTATTATGGAACTTGTGAAC+GGG + chr1_4:56052874-56052893 Msa0171350:intron 35.0%
AATTCATAAGTTCCTCTTCG+TGG - chr1_4:56052906-56052925 None:intergenic 35.0%
ACTAGCATAATTTGGGGAAA+GGG - chr1_4:56053036-56053055 None:intergenic 35.0%
AACTAGCATAATTTGGGGAA+AGG - chr1_4:56053037-56053056 None:intergenic 35.0%
CTGCATACAATACACCAAAA+TGG - chr1_4:56053132-56053151 None:intergenic 35.0%
TTGTGTAAAAAACCAGGGTA+AGG - chr1_4:56053155-56053174 None:intergenic 35.0%
AATTGAATTTCAGCAGAGGA+AGG + chr1_4:56053267-56053286 Msa0171350:intron 35.0%
ATTGAATTTCAGCAGAGGAA+GGG + chr1_4:56053268-56053287 Msa0171350:intron 35.0%
!!! AGTTTTAGTTGTTAGGGTGT+AGG - chr1_4:56053407-56053426 None:intergenic 35.0%
! GCAAGTCCTTATACTTGTTT+TGG + chr1_4:56053436-56053455 Msa0171350:intron 35.0%
CTAATCTATGAGCTATTCTC+TGG + chr1_4:56053902-56053921 Msa0171350:CDS 35.0%
! TTTGAAGTTGAGCAAAACAG+AGG + chr1_4:56053925-56053944 Msa0171350:CDS 35.0%
TCAAAGCTTATAGAGAACAG+TGG + chr1_4:56054157-56054176 Msa0171350:CDS 35.0%
!!! TTAGGTGTGTTTTGACAGTA+TGG + chr1_4:56054433-56054452 Msa0171350:intron 35.0%
!!! GTGTTTTGACAGTATGGTAT+TGG + chr1_4:56054439-56054458 Msa0171350:intron 35.0%
TGAGATTGCATTTGTACACT+AGG + chr1_4:56054626-56054645 Msa0171350:intron 35.0%
GAGATTGCATTTGTACACTA+GGG + chr1_4:56054627-56054646 Msa0171350:intron 35.0%
TAATACTTTCTCTCTCCACT+TGG - chr1_4:56054673-56054692 None:intergenic 35.0%
GCTCATATATAAGAGTGATC+TGG + chr1_4:56054713-56054732 Msa0171350:intron 35.0%
!! TATTTTTGCTCGTTTGCAAC+TGG - chr1_4:56054812-56054831 None:intergenic 35.0%
GGTAGACACAATACATTTCA+TGG + chr1_4:56054989-56055008 Msa0171350:CDS 35.0%
! TTTGAAAGATAGTGTCGAGA+AGG + chr1_4:56055022-56055041 Msa0171350:CDS 35.0%
TTCTTTAACACAATCTGACG+AGG - chr1_4:56055089-56055108 None:intergenic 35.0%
TCGTCAGATTGTGTTAAAGA+AGG + chr1_4:56055088-56055107 Msa0171350:CDS 35.0%
! TGTTAAAGAAGGTATGTCTC+TGG + chr1_4:56055099-56055118 Msa0171350:intron 35.0%
TCAAGGGAAGAAGCTAATAA+AGG - chr1_4:56055208-56055227 None:intergenic 35.0%
TTAGCTTCTTCCCTTGAATT+TGG + chr1_4:56055211-56055230 Msa0171350:intron 35.0%
TTTAACAATGCAGTCAAAGC+GGG - chr1_4:56055250-56055269 None:intergenic 35.0%
TATTAGAGAGACATTTACGC+TGG - chr1_4:56055329-56055348 None:intergenic 35.0%
GCGTAAATGTCTCTCTAATA+TGG + chr1_4:56055329-56055348 Msa0171350:intron 35.0%
TATGGACTCATCTCATGTAT+TGG + chr1_4:56055347-56055366 Msa0171350:intron 35.0%
ACAACGTAGAACATGAATCT+CGG - chr1_4:56055586-56055605 None:intergenic 35.0%
TACTGTTGACACTTACTATC+AGG + chr1_4:56055615-56055634 Msa0171350:intron 35.0%
TCTTAAGTCCATGTTAGTTC+TGG + chr1_4:56055696-56055715 Msa0171350:CDS 35.0%
AGTCAAAAGTCAAAACACAG+TGG + chr1_4:56055899-56055918 Msa0171350:intron 35.0%
ATGCGTTAGAAGTTGGAATA+GGG - chr1_4:56056140-56056159 None:intergenic 35.0%
AATGCGTTAGAAGTTGGAAT+AGG - chr1_4:56056141-56056160 None:intergenic 35.0%
TATCTAGTTAAGTAGAGGTC+TGG + chr1_4:56056428-56056447 Msa0171350:intron 35.0%
ATCTAGTTAAGTAGAGGTCT+GGG + chr1_4:56056429-56056448 Msa0171350:intron 35.0%
TAAAGCTAATCCAAGTTCAG+CGG + chr1_4:56056573-56056592 Msa0171350:intron 35.0%
AACTAACACCAATAGGCTAT+AGG - chr1_4:56056697-56056716 None:intergenic 35.0%
!!! TCCGATTGGTTTTTTTCTCT+TGG - chr1_4:56056760-56056779 None:intergenic 35.0%
GTTAGTGAACCCCATTAAAA+AGG + chr1_4:56056808-56056827 Msa0171350:intron 35.0%
GGAAATGTTCTTGAAAGTTC+AGG + chr1_4:56056829-56056848 Msa0171350:intron 35.0%
CTATTGGATGAATCTTTAGC+TGG + chr1_4:56056903-56056922 Msa0171350:intron 35.0%
CCTTAATAATGACACAGACA+AGG - chr1_4:56056987-56057006 None:intergenic 35.0%
! CCTTGTCTGTGTCATTATTA+AGG + chr1_4:56056984-56057003 Msa0171350:CDS 35.0%
GATAAATGTGTTGGGAGTAA+AGG + chr1_4:56057046-56057065 Msa0171350:intron 35.0%
GTAGTGTTTGTTCTAATAGC+TGG - chr1_4:56057325-56057344 None:intergenic 35.0%
ACAAACACTACTATCTTGCT+AGG + chr1_4:56057334-56057353 Msa0171350:CDS 35.0%
TGCAAGCTACTTAAAAGAAG+GGG + chr1_4:56057363-56057382 Msa0171350:CDS 35.0%
TCATCGGTGAATTAACTCTT+CGG + chr1_4:56057453-56057472 Msa0171350:intron 35.0%
ATCTTGATTGTCAGGCATTA+TGG + chr1_4:56057658-56057677 Msa0171350:intron 35.0%
AACATTAGGAAGAATCCTAG+TGG - chr1_4:56057726-56057745 None:intergenic 35.0%
AAACAGTGATGTTCGATCTA+AGG + chr1_4:56057892-56057911 Msa0171350:intron 35.0%
CATAGTATGAATCTAGTGAC+AGG - chr1_4:56057985-56058004 None:intergenic 35.0%
CTGTCACTAGATTCATACTA+TGG + chr1_4:56057983-56058002 Msa0171350:intron 35.0%
CTTTAATGGAGAGTAGACTA+AGG - chr1_4:56058146-56058165 None:intergenic 35.0%
TTAAACCACTGGTGCATATA+TGG + chr1_4:56058384-56058403 Msa0171350:intron 35.0%
TAAACCACTGGTGCATATAT+GGG + chr1_4:56058385-56058404 Msa0171350:intron 35.0%
!! ATCTTCAGCTCTAAGCTTAT+TGG + chr1_4:56058621-56058640 Msa0171350:intron 35.0%
CAGCAAATGCAAGTTTACTT+GGG + chr1_4:56058769-56058788 Msa0171350:CDS 35.0%
TTAATTACCTTTCCTAGAGC+GGG - chr1_4:56058888-56058907 None:intergenic 35.0%
CAGAACCAAAGGATTAGATA+TGG - chr1_4:56059049-56059068 None:intergenic 35.0%
AAGAGTTAAGTCAGAACCAA+AGG - chr1_4:56059060-56059079 None:intergenic 35.0%
CAATAGAAGATGTTGGTGTA+AGG - chr1_4:56059170-56059189 None:intergenic 35.0%
ATGATTAAGAATACCTGAGC+TGG - chr1_4:56059193-56059212 None:intergenic 35.0%
ATACAAAGAAGGCCAAAAAG+AGG - chr1_4:56059281-56059300 None:intergenic 35.0%
AAGTTATATAGATGATCGGG+TGG - chr1_4:56059373-56059392 None:intergenic 35.0%
TCTTACCAAGTTCAGTAATG+TGG + chr1_4:56059411-56059430 Msa0171350:intron 35.0%
TAAGTCCACATTACTGAACT+TGG - chr1_4:56059419-56059438 None:intergenic 35.0%
TACTTCACTAATTGTACACC+GGG - chr1_4:56059465-56059484 None:intergenic 35.0%
AGATAACATCTTTGCCTCAA+GGG - chr1_4:56059658-56059677 None:intergenic 35.0%
CTAACATTCAAGCAGATCAA+AGG + chr1_4:56059985-56060004 Msa0171350:CDS 35.0%
TTAACAGTAACTAGCAGACA+TGG - chr1_4:56060091-56060110 None:intergenic 35.0%
GAAAACATGAACTAGGAAGT+AGG - chr1_4:56060208-56060227 None:intergenic 35.0%
GATTTCATAGGGAAAGGTAA+AGG - chr1_4:56060272-56060291 None:intergenic 35.0%
GATCAGGTGCCTATATAAAA+TGG - chr1_4:56060380-56060399 None:intergenic 35.0%
GCACATAAAGATGATTAACC+AGG - chr1_4:56060475-56060494 None:intergenic 35.0%
!! CTCAACTTTGGTGTAGTTTT+GGG - chr1_4:56060551-56060570 None:intergenic 35.0%
! GATGAAGATGATGATTTGTG+CGG + chr1_4:56060575-56060594 Msa0171350:CDS 35.0%
!!! GATTTTGATGTTTTTGGAGC+AGG - chr1_4:56060614-56060633 None:intergenic 35.0%
!!! GGTTTTTTTTCTTCTTGTGG+TGG + chr1_4:56060862-56060881 Msa0171350:three_prime_UTR 35.0%
TGGGTTCCTGTATTTAAACA+TGG - chr1_4:56060895-56060914 None:intergenic 35.0%
TCACGTTAATTTCAGGACGA+TGG + chr1_4:56050172-56050191 Msa0171350:intron 40.0%
!!! TTTTGATGGTGGTTCTTCGA+AGG + chr1_4:56050593-56050612 Msa0171350:CDS 40.0%
TAAACCCTTGTGAGACTCTT+TGG + chr1_4:56050829-56050848 Msa0171350:intron 40.0%
AAACCCTTGTGAGACTCTTT+GGG + chr1_4:56050830-56050849 Msa0171350:intron 40.0%
ACACTCACAATTACTGCCTT+AGG - chr1_4:56051379-56051398 None:intergenic 40.0%
TATTCACTTTGTGGGGTTGT+AGG + chr1_4:56051610-56051629 Msa0171350:intron 40.0%
ATTCACTTTGTGGGGTTGTA+GGG + chr1_4:56051611-56051630 Msa0171350:intron 40.0%
GAGTATTCATGAGCTAAGTC+TGG + chr1_4:56051707-56051726 Msa0171350:intron 40.0%
TTGTCACACAGACTTTAGAC+TGG + chr1_4:56051825-56051844 Msa0171350:CDS 40.0%
GAGACAAACTTAAAAGGCCA+TGG - chr1_4:56052088-56052107 None:intergenic 40.0%
!! CATGTGCTGTTTCACTTCAT+TGG + chr1_4:56052139-56052158 Msa0171350:intron 40.0%
ATTGATGCTCCCTTAAATGG+AGG + chr1_4:56052248-56052267 Msa0171350:intron 40.0%
CCAGCATAAACCTCCATTTA+AGG - chr1_4:56052261-56052280 None:intergenic 40.0%
CCTTAAATGGAGGTTTATGC+TGG + chr1_4:56052258-56052277 Msa0171350:intron 40.0%
TTTCCATTCAGCGATATGCA+TGG + chr1_4:56052376-56052395 Msa0171350:intron 40.0%
TGCAACACAGTACCAATCAA+TGG + chr1_4:56052404-56052423 Msa0171350:CDS 40.0%
! ATTTTGCCAGCTCCATTGAT+TGG - chr1_4:56052419-56052438 None:intergenic 40.0%
TGAGTAGTAGGTCCTAGATT+AGG + chr1_4:56052592-56052611 Msa0171350:intron 40.0%
GAGTAGTAGGTCCTAGATTA+GGG + chr1_4:56052593-56052612 Msa0171350:intron 40.0%
GTGTTGTAATGCTTCCACAA+TGG - chr1_4:56052698-56052717 None:intergenic 40.0%
! ACCAGGTTTCCCTTTTATGA+CGG + chr1_4:56052716-56052735 Msa0171350:intron 40.0%
! TCCCTTTTATGACGGCAATT+TGG + chr1_4:56052724-56052743 Msa0171350:intron 40.0%
! CGGCAATTTGGAATATTAGG+AGG + chr1_4:56052736-56052755 Msa0171350:intron 40.0%
GGAATATTAGGAGGGATGAA+TGG + chr1_4:56052745-56052764 Msa0171350:intron 40.0%
!!! CATTTTGGCTTGTTTGCTGA+AGG + chr1_4:56052790-56052809 Msa0171350:intron 40.0%
!! TGAATGGGCTAGTCAAAAAG+AGG - chr1_4:56052829-56052848 None:intergenic 40.0%
TTGCATGGCCATGACTATTA+TGG + chr1_4:56052860-56052879 Msa0171350:intron 40.0%
CTAGCATAATTTGGGGAAAG+GGG - chr1_4:56053035-56053054 None:intergenic 40.0%
AAATGGTCCACCAAAATGGT+GGG - chr1_4:56053115-56053134 None:intergenic 40.0%
AAAATGGTCCACCAAAATGG+TGG - chr1_4:56053116-56053135 None:intergenic 40.0%
!! ACCATTTTGGTGGACCATTT+TGG + chr1_4:56053115-56053134 Msa0171350:intron 40.0%
ACCAAAATGGTCCACCAAAA+TGG - chr1_4:56053119-56053138 None:intergenic 40.0%
!!! ACCCTGGTTTTTTACACAAG+AGG + chr1_4:56053156-56053175 Msa0171350:intron 40.0%
GCCTCTTGTGTAAAAAACCA+GGG - chr1_4:56053160-56053179 None:intergenic 40.0%
AGCCTCTTGTGTAAAAAACC+AGG - chr1_4:56053161-56053180 None:intergenic 40.0%
TCATGTGACTGAAAAGTCAC+GGG - chr1_4:56053200-56053219 None:intergenic 40.0%
GTCATGTGACTGAAAAGTCA+CGG - chr1_4:56053201-56053220 None:intergenic 40.0%
AAGTGTAGTAGAACATGTGC+CGG - chr1_4:56053298-56053317 None:intergenic 40.0%
GGTGTAGGTCAATTAGATGA+TGG - chr1_4:56053392-56053411 None:intergenic 40.0%
!! CTCACTTAACCTTTGGGATT+GGG + chr1_4:56053480-56053499 Msa0171350:intron 40.0%
ATGATTTAGAGGGGTCTACT+TGG - chr1_4:56053858-56053877 None:intergenic 40.0%
TTGAGCAAAACAGAGGAGTT+AGG + chr1_4:56053932-56053951 Msa0171350:CDS 40.0%
TTACTGAGAAGTCTGACCTT+GGG - chr1_4:56053974-56053993 None:intergenic 40.0%
CTTATAGAGAACAGTGGTGA+GGG + chr1_4:56054163-56054182 Msa0171350:intron 40.0%
!! ATTAGGCTTTAGGATTGCCA+TGG + chr1_4:56054375-56054394 Msa0171350:intron 40.0%
!! TGATAGCATTGATCACCAAG+TGG + chr1_4:56054655-56054674 Msa0171350:intron 40.0%
!! TTGGCTTTTCCACATTTTGG+AGG + chr1_4:56054767-56054786 Msa0171350:intron 40.0%
! TGGCTTTTCCACATTTTGGA+GGG + chr1_4:56054768-56054787 Msa0171350:intron 40.0%
GAAGATTTCCCTCCAAAATG+TGG - chr1_4:56054779-56054798 None:intergenic 40.0%
AGCAGCTGAACCAAATTCAA+GGG - chr1_4:56055224-56055243 None:intergenic 40.0%
TTAACAATGCAGTCAAAGCG+GGG - chr1_4:56055249-56055268 None:intergenic 40.0%
AGAGACATTTACGCTGGTAT+TGG - chr1_4:56055323-56055342 None:intergenic 40.0%
AGAAACCAGTAGCAACATGA+GGG - chr1_4:56055645-56055664 None:intergenic 40.0%
!! TGATGCATCTGCTTTTCTGA+GGG + chr1_4:56055666-56055685 Msa0171350:CDS 40.0%
!! AATTATCCTAGTCTTGCCGT+AGG + chr1_4:56055963-56055982 Msa0171350:intron 40.0%
ACAGTGCTAGTACTATCCTA+CGG - chr1_4:56055982-56056001 None:intergenic 40.0%
ACGCATTAGTATATATGCCC+TGG + chr1_4:56056154-56056173 Msa0171350:intron 40.0%
TCAGATTTGATGCCAAGATG+TGG + chr1_4:56056308-56056327 Msa0171350:intron 40.0%
TCATGCATCTAACCACATCT+TGG - chr1_4:56056323-56056342 None:intergenic 40.0%
TGTGGTTAGATGCATGATCT+TGG + chr1_4:56056326-56056345 Msa0171350:intron 40.0%
GTGGTTAGATGCATGATCTT+GGG + chr1_4:56056327-56056346 Msa0171350:intron 40.0%
AAAGGACAGTGCTTTGATCA+TGG + chr1_4:56056381-56056400 Msa0171350:intron 40.0%
!! GCTGAACTTGGATTAGCTTT+AGG - chr1_4:56056574-56056593 None:intergenic 40.0%
! GAGAACTTTTCCCCTTTAAC+TGG - chr1_4:56056605-56056624 None:intergenic 40.0%
CACTTAGACCTATAGCCTAT+TGG + chr1_4:56056686-56056705 Msa0171350:intron 40.0%
! AAGGCATCTATCAACGTTAC+AGG + chr1_4:56057003-56057022 Msa0171350:CDS 40.0%
!!! AATGTTTTTTTTTGGGGGGC+AGG + chr1_4:56057207-56057226 Msa0171350:intron 40.0%
AGCAAACTATTTGAACTCGC+AGG - chr1_4:56057404-56057423 None:intergenic 40.0%
CATCGGTGAATTAACTCTTC+GGG + chr1_4:56057454-56057473 Msa0171350:intron 40.0%
AGTGATGTCATAGTTGGAAC+TGG - chr1_4:56057696-56057715 None:intergenic 40.0%
ACATCACTGAAATTGCCACT+AGG + chr1_4:56057708-56057727 Msa0171350:CDS 40.0%
TACTCACAATTGATCCTGAC+AGG + chr1_4:56057750-56057769 Msa0171350:CDS 40.0%
TGATTGGAGATCACATGTGA+AGG - chr1_4:56058438-56058457 None:intergenic 40.0%
GAAGAACCCACAAAAACATG+TGG - chr1_4:56058557-56058576 None:intergenic 40.0%
! CAGATAAGAGTATGAGCATG+AGG - chr1_4:56058686-56058705 None:intergenic 40.0%
ACAAATCTAGAGGCTACTGA+GGG + chr1_4:56058720-56058739 Msa0171350:CDS 40.0%
CCAAGTAAACTTGCATTTGC+TGG - chr1_4:56058771-56058790 None:intergenic 40.0%
CCAGCAAATGCAAGTTTACT+TGG + chr1_4:56058768-56058787 Msa0171350:CDS 40.0%
GCAAGTTTACTTGGGTAAGT+TGG + chr1_4:56058777-56058796 Msa0171350:intron 40.0%
TTAGAAAATCAGGCACCCTA+AGG - chr1_4:56058983-56059002 None:intergenic 40.0%
!! TAGGGTGCCTGATTTTCTAA+CGG + chr1_4:56058983-56059002 Msa0171350:intron 40.0%
AACTCTTGTTGCTGTGTAGA+TGG + chr1_4:56059073-56059092 Msa0171350:intron 40.0%
ACTCTTGTTGCTGTGTAGAT+GGG + chr1_4:56059074-56059093 Msa0171350:intron 40.0%
TATGAGTTCCTTTACCCTGA+AGG + chr1_4:56059098-56059117 Msa0171350:CDS 40.0%
ATGAGTTCCTTTACCCTGAA+GGG + chr1_4:56059099-56059118 Msa0171350:CDS 40.0%
AGGTCTCATCAGATATTCAG+AGG - chr1_4:56059255-56059274 None:intergenic 40.0%
! ATGAGACCTACACCTCTTTT+TGG + chr1_4:56059266-56059285 Msa0171350:intron 40.0%
ACTTCACTAATTGTACACCG+GGG - chr1_4:56059464-56059483 None:intergenic 40.0%
!! AAACTTGCTATATCTGGGCA+TGG + chr1_4:56059527-56059546 Msa0171350:intron 40.0%
GGGAAGAAAACTGAGAAACT+GGG + chr1_4:56059587-56059606 Msa0171350:intron 40.0%
GGAAGAAAACTGAGAAACTG+GGG + chr1_4:56059588-56059607 Msa0171350:intron 40.0%
GAAGAAAACTGAGAAACTGG+GGG + chr1_4:56059589-56059608 Msa0171350:intron 40.0%
GAGATAACATCTTTGCCTCA+AGG - chr1_4:56059659-56059678 None:intergenic 40.0%
ATTCAGGCAGTTTCCTTGTA+TGG + chr1_4:56059725-56059744 Msa0171350:intron 40.0%
TTCAGGCAGTTTCCTTGTAT+GGG + chr1_4:56059726-56059745 Msa0171350:intron 40.0%
GGTGTGGAATTTACACAGAT+AGG - chr1_4:56059822-56059841 None:intergenic 40.0%
ACTAGAGAATGGAATTGACG+AGG + chr1_4:56059890-56059909 Msa0171350:CDS 40.0%
ATGTTAGTAACAGCTGGAGT+TGG - chr1_4:56059972-56059991 None:intergenic 40.0%
GCTTGAATGTTAGTAACAGC+TGG - chr1_4:56059978-56059997 None:intergenic 40.0%
ACATTCAAGCAGATCAAAGG+CGG + chr1_4:56059988-56060007 Msa0171350:CDS 40.0%
! TGTGAAACAGGTTGAGAAAC+TGG - chr1_4:56060014-56060033 None:intergenic 40.0%
CAACCTGTTTCACAGACAAA+CGG + chr1_4:56060020-56060039 Msa0171350:CDS 40.0%
ATACCGTTTGTCTGTGAAAC+AGG - chr1_4:56060026-56060045 None:intergenic 40.0%
AACTAGCAGACATGGAAATG+TGG - chr1_4:56060083-56060102 None:intergenic 40.0%
!! AAAGGTGCTGATTCACTCAA+CGG - chr1_4:56060254-56060273 None:intergenic 40.0%
ATTCTCAAGTACAGCAGATC+AGG - chr1_4:56060396-56060415 None:intergenic 40.0%
TGTGCACATGCATCAATTGA+AGG + chr1_4:56060490-56060509 Msa0171350:intron 40.0%
GTGCACATGCATCAATTGAA+GGG + chr1_4:56060491-56060510 Msa0171350:intron 40.0%
!! GCTCAACTTTGGTGTAGTTT+TGG - chr1_4:56060552-56060571 None:intergenic 40.0%
AACTACACCAAAGTTGAGCA+AGG + chr1_4:56060553-56060572 Msa0171350:CDS 40.0%
TCTTCATCCTTGCTCAACTT+TGG - chr1_4:56060563-56060582 None:intergenic 40.0%
!!! TAATTTTGGAGCAGCAGGTT+TGG - chr1_4:56060750-56060769 None:intergenic 40.0%
AAACCTGCTGCTCCAAAATT+AGG + chr1_4:56060749-56060768 Msa0171350:CDS 40.0%
CGAGGAAATGTTGAGTTTGT+AGG + chr1_4:56060841-56060860 Msa0171350:three_prime_UTR 40.0%
!!! TTTTTTCTTCTTGTGGTGGG+TGG + chr1_4:56060866-56060885 Msa0171350:three_prime_UTR 40.0%
! GAACTTTGAAGAGGGAAACG+TGG - chr1_4:56049880-56049899 None:intergenic 45.0%
TTTGTAGGTGTATCCGGAAC+TGG + chr1_4:56050011-56050030 Msa0171350:CDS 45.0%
AACGATCTCCCATACACCAT+AGG + chr1_4:56050038-56050057 Msa0171350:CDS 45.0%
AAGGTTCGCCTATGGTGTAT+GGG - chr1_4:56050049-56050068 None:intergenic 45.0%
TAAGGTTCGCCTATGGTGTA+TGG - chr1_4:56050050-56050069 None:intergenic 45.0%
ATTTCAGGACGATGGTTCAC+CGG + chr1_4:56050180-56050199 Msa0171350:intron 45.0%
TCTGGAAGTAATGCTCAGGA+TGG + chr1_4:56050220-56050239 Msa0171350:CDS 45.0%
TCAGGATGGACATTTAGCTG+CGG + chr1_4:56050234-56050253 Msa0171350:CDS 45.0%
! TAGGTCTTGAAGGTGCACAA+AGG + chr1_4:56050673-56050692 Msa0171350:CDS 45.0%
TCTCCCAAAGAGTCTCACAA+GGG - chr1_4:56050836-56050855 None:intergenic 45.0%
! AGACTCTTTGGGAGAGCTTA+TGG + chr1_4:56050841-56050860 Msa0171350:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr1_4:56051273-56051292 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr1_4:56051274-56051293 None:intergenic 45.0%
GTTTGTCTAGTCATGGCCTA+AGG + chr1_4:56051360-56051379 Msa0171350:intron 45.0%
AGTCTGTGTGACAACAACAC+TGG - chr1_4:56051819-56051838 None:intergenic 45.0%
ACCAACATTTGCGTAGAGGA+TGG - chr1_4:56051899-56051918 None:intergenic 45.0%
CTTTCACCTTATGTGGAGAG+TGG - chr1_4:56052042-56052061 None:intergenic 45.0%
!! GGTTTATGCTGGCTTTGATC+TGG + chr1_4:56052269-56052288 Msa0171350:intron 45.0%
AAGCCATGCATATCGCTGAA+TGG - chr1_4:56052382-56052401 None:intergenic 45.0%
ACAGTACCAATCAATGGAGC+TGG + chr1_4:56052410-56052429 Msa0171350:CDS 45.0%
!! TCCATGGGCCATTGATTCTT+GGG + chr1_4:56052467-56052486 Msa0171350:CDS 45.0%
AGTTGTCCCTTGTGAGTAGT+AGG + chr1_4:56052580-56052599 Msa0171350:intron 45.0%
CTAGGACCTACTACTCACAA+GGG - chr1_4:56052589-56052608 None:intergenic 45.0%
! TCTAGGACCTACTACTCACA+AGG - chr1_4:56052590-56052609 None:intergenic 45.0%
ACAATGGTGAACCCCCAAAA+GGG - chr1_4:56052682-56052701 None:intergenic 45.0%
!! TGTGGAAGCATTACAACACC+AGG + chr1_4:56052699-56052718 Msa0171350:intron 45.0%
TGCTAGTTAAAAGGGCAACC+CGG + chr1_4:56053049-56053068 Msa0171350:intron 45.0%
ACTAAAGCTCCCGCATACAT+AGG + chr1_4:56053075-56053094 Msa0171350:intron 45.0%
CTAAAGCTCCCGCATACATA+GGG + chr1_4:56053076-56053095 Msa0171350:intron 45.0%
TATTGTATGCAGCCTTACCC+TGG + chr1_4:56053140-56053159 Msa0171350:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr1_4:56053167-56053186 Msa0171350:intron 45.0%
CAACTTTACCAGTTGCGTCA+TGG + chr1_4:56053223-56053242 Msa0171350:intron 45.0%
TCCCAAGCTCACTTAACCTT+TGG + chr1_4:56053473-56053492 Msa0171350:intron 45.0%
CCCAAAGGTTAAGTGAGCTT+GGG - chr1_4:56053477-56053496 None:intergenic 45.0%
CCCAAGCTCACTTAACCTTT+GGG + chr1_4:56053474-56053493 Msa0171350:intron 45.0%
TCCCAAAGGTTAAGTGAGCT+TGG - chr1_4:56053478-56053497 None:intergenic 45.0%
!! GCTCACTTAACCTTTGGGAT+TGG + chr1_4:56053479-56053498 Msa0171350:intron 45.0%
ACATACGTACCCAATCCCAA+AGG - chr1_4:56053492-56053511 None:intergenic 45.0%
GTTACTGAGAAGTCTGACCT+TGG - chr1_4:56053975-56053994 None:intergenic 45.0%
TTCAGCAACCACTGGTAATC+TGG - chr1_4:56054109-56054128 None:intergenic 45.0%
GCTTATAGAGAACAGTGGTG+AGG + chr1_4:56054162-56054181 Msa0171350:intron 45.0%
AAACTCTCAGCTACTGTCCA+TGG - chr1_4:56054395-56054414 None:intergenic 45.0%
ATTTGGAAGCTTGCGGAAGA+AGG - chr1_4:56055051-56055070 None:intergenic 45.0%
CTGCTGAATTTGGAAGCTTG+CGG - chr1_4:56055058-56055077 None:intergenic 45.0%
CAGCAGCTGAACCAAATTCA+AGG - chr1_4:56055225-56055244 None:intergenic 45.0%
TAACAATGCAGTCAAAGCGG+GGG - chr1_4:56055248-56055267 None:intergenic 45.0%
GTTTACCCTCATGTTGCTAC+TGG + chr1_4:56055637-56055656 Msa0171350:CDS 45.0%
GAGAAACCAGTAGCAACATG+AGG - chr1_4:56055646-56055665 None:intergenic 45.0%
!! CTGATGCATCTGCTTTTCTG+AGG + chr1_4:56055665-56055684 Msa0171350:CDS 45.0%
TACTATCCTACGGCAAGACT+AGG - chr1_4:56055972-56055991 None:intergenic 45.0%
TCTGGGTTGTGTCAAAGCTT+GGG + chr1_4:56056446-56056465 Msa0171350:intron 45.0%
AGCGGATGGATCCAGTTAAA+GGG + chr1_4:56056591-56056610 Msa0171350:intron 45.0%
GGTCTAAGTGACAGTCAGTT+TGG - chr1_4:56056676-56056695 None:intergenic 45.0%
!! ATTCGGCAGTTTTGTCCGAT+TGG - chr1_4:56056774-56056793 None:intergenic 45.0%
CATGATTGCAGCTGTCTCAA+AGG + chr1_4:56056960-56056979 Msa0171350:intron 45.0%
TGCTACTCTAGCATGTGGAA+AGG - chr1_4:56057545-56057564 None:intergenic 45.0%
TTTCCACATGCTAGAGTAGC+AGG + chr1_4:56057544-56057563 Msa0171350:CDS 45.0%
ATACCTGCTACTCTAGCATG+TGG - chr1_4:56057550-56057569 None:intergenic 45.0%
GATGTCATAGTTGGAACTGG+TGG - chr1_4:56057693-56057712 None:intergenic 45.0%
GACAAATCTAGAGGCTACTG+AGG + chr1_4:56058719-56058738 Msa0171350:intron 45.0%
AAGGAGATCTGCATCACCTT+AGG + chr1_4:56058964-56058983 Msa0171350:intron 45.0%
AGGAGATCTGCATCACCTTA+GGG + chr1_4:56058965-56058984 Msa0171350:intron 45.0%
!! AGGGTGCCTGATTTTCTAAC+GGG + chr1_4:56058984-56059003 Msa0171350:intron 45.0%
TGAAGCCCCGTTAGAAAATC+AGG - chr1_4:56058993-56059012 None:intergenic 45.0%
CAGCACAGATGCAGATAAAG+AGG - chr1_4:56059018-56059037 None:intergenic 45.0%
CTAGAACTCACAGAAGCAAC+TGG - chr1_4:56059144-56059163 None:intergenic 45.0%
GAGCTGGCAATAGAAGATGT+TGG - chr1_4:56059177-56059196 None:intergenic 45.0%
ACATCTTCTATTGCCAGCTC+AGG + chr1_4:56059177-56059196 Msa0171350:CDS 45.0%
! AGAAGGCCAAAAAGAGGTGT+AGG - chr1_4:56059275-56059294 None:intergenic 45.0%
CTTGAATAATGCTACCTCCC+CGG + chr1_4:56059444-56059463 Msa0171350:intron 45.0%
GGGGAAGAAAACTGAGAAAC+TGG + chr1_4:56059586-56059605 Msa0171350:intron 45.0%
TAACATCTTTGCCTCAAGGG+TGG - chr1_4:56059655-56059674 None:intergenic 45.0%
!! ACACAGATAGGTGCTGTTGA+AGG - chr1_4:56059810-56059829 None:intergenic 45.0%
AGCCTGAAAACGACAAGGAT+GGG + chr1_4:56059913-56059932 Msa0171350:CDS 45.0%
TGAAAACGACAAGGATGGGT+GGG + chr1_4:56059917-56059936 Msa0171350:CDS 45.0%
!! GTTGGCTTTGTCTCTTCAAG+TGG - chr1_4:56059954-56059973 None:intergenic 45.0%
TCTGCCAGCTAATAAGGGTT+TGG - chr1_4:56060717-56060736 None:intergenic 45.0%
CGACATCTGCCAGCTAATAA+GGG - chr1_4:56060722-56060741 None:intergenic 45.0%
CCTTATTAGCTGGCAGATGT+CGG + chr1_4:56060720-56060739 Msa0171350:CDS 45.0%
CTTATTAGCTGGCAGATGTC+GGG + chr1_4:56060721-56060740 Msa0171350:CDS 45.0%
TTATTAGCTGGCAGATGTCG+GGG + chr1_4:56060722-56060741 Msa0171350:CDS 45.0%
CTCCAAAATTAGGTGCTCAG+CGG + chr1_4:56060759-56060778 Msa0171350:CDS 45.0%
! ATCCGCTGAGCACCTAATTT+TGG - chr1_4:56060764-56060783 None:intergenic 45.0%
! TAACCAAATTGCCACTTGCC+AGG + chr1_4:56060806-56060825 Msa0171350:exon 45.0%
! AACCAAATTGCCACTTGCCA+GGG + chr1_4:56060807-56060826 Msa0171350:exon 45.0%
!! TAAATAAATAAATAAAACAA+AGG - chr1_4:56054001-56054020 None:intergenic 5.0%
!! AATTTCAATATATAATATAT+AGG + chr1_4:56055375-56055394 Msa0171350:intron 5.0%
TGAAGAGGGAAACGTGGATG+TGG - chr1_4:56049874-56049893 None:intergenic 50.0%
TGGTGTATGGGAGATCGTTG+AGG - chr1_4:56050037-56050056 None:intergenic 50.0%
GGAAGAGTAAGGTTCGCCTA+TGG - chr1_4:56050057-56050076 None:intergenic 50.0%
CGAACCTTACTCTTCCGCTT+GGG + chr1_4:56050061-56050080 Msa0171350:CDS 50.0%
GAACCTTACTCTTCCGCTTG+GGG + chr1_4:56050062-56050081 Msa0171350:CDS 50.0%
CAGGATGGACATTTAGCTGC+GGG + chr1_4:56050235-56050254 Msa0171350:CDS 50.0%
CATTTAGCTGCGGGTCGTAA+CGG + chr1_4:56050244-56050263 Msa0171350:CDS 50.0%
CTCTCCCAAAGAGTCTCACA+AGG - chr1_4:56050837-56050856 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr1_4:56051269-56051288 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr1_4:56051275-56051294 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr1_4:56051272-56051291 Msa0171350:intron 50.0%
CACTGTCTTGCGCTTTGTCT+GGG - chr1_4:56051509-56051528 None:intergenic 50.0%
TCACTGTCTTGCGCTTTGTC+TGG - chr1_4:56051510-56051529 None:intergenic 50.0%
GCCATCCTCTACGCAAATGT+TGG + chr1_4:56051895-56051914 Msa0171350:CDS 50.0%
TGGAGCTGGCAAAATCTGAC+TGG + chr1_4:56052424-56052443 Msa0171350:CDS 50.0%
GGAGCTGGCAAAATCTGACT+GGG + chr1_4:56052425-56052444 Msa0171350:CDS 50.0%
CAAGAATCAATGGCCCATGG+AGG - chr1_4:56052468-56052487 None:intergenic 50.0%
!! CTCCATGGGCCATTGATTCT+TGG + chr1_4:56052466-56052485 Msa0171350:CDS 50.0%
!! CCATGGGCCATTGATTCTTG+GGG + chr1_4:56052468-56052487 Msa0171350:CDS 50.0%
!! GCCATTGATTCTTGGGGCAT+GGG + chr1_4:56052474-56052493 Msa0171350:CDS 50.0%
ACCCATGCCCCAAGAATCAA+TGG - chr1_4:56052478-56052497 None:intergenic 50.0%
TGAAGACTTGGCACAACTGC+TGG + chr1_4:56052557-56052576 Msa0171350:intron 50.0%
CACAATGGTGAACCCCCAAA+AGG - chr1_4:56052683-56052702 None:intergenic 50.0%
!! CTTTTGGGGGTTCACCATTG+TGG + chr1_4:56052681-56052700 Msa0171350:intron 50.0%
GCCGTCATAAAAGGGAAACC+TGG - chr1_4:56052720-56052739 None:intergenic 50.0%
TTCCCAGACCCTATGTATGC+GGG - chr1_4:56053087-56053106 None:intergenic 50.0%
CTTCCCAGACCCTATGTATG+CGG - chr1_4:56053088-56053107 None:intergenic 50.0%
GCATACATAGGGTCTGGGAA+GGG + chr1_4:56053087-56053106 Msa0171350:intron 50.0%
CATACATAGGGTCTGGGAAG+GGG + chr1_4:56053088-56053107 Msa0171350:intron 50.0%
AAAGTCACGGGTTCAAGTCC+TGG - chr1_4:56053188-56053207 None:intergenic 50.0%
TTTGGGAACCATGACGCAAC+TGG - chr1_4:56053234-56053253 None:intergenic 50.0%
CAACACTGCATCCATTCCCA+AGG + chr1_4:56053955-56053974 Msa0171350:CDS 50.0%
GAGAAGTCTGACCTTGGGAA+TGG - chr1_4:56053969-56053988 None:intergenic 50.0%
CTCTGCTTCCAGATTACCAG+TGG + chr1_4:56054098-56054117 Msa0171350:CDS 50.0%
GGAAGCTGCTCTGCTGAATT+TGG - chr1_4:56055068-56055087 None:intergenic 50.0%
CTTCGGAGCCAGAACTAACA+TGG - chr1_4:56055707-56055726 None:intergenic 50.0%
!! CATGTTAGTTCTGGCTCCGA+AGG + chr1_4:56055705-56055724 Msa0171350:CDS 50.0%
GCATGATCTTGGGATCTCAG+TGG + chr1_4:56056337-56056356 Msa0171350:intron 50.0%
! TGGGATCTCAGTGGTGTCAA+TGG + chr1_4:56056346-56056365 Msa0171350:intron 50.0%
! GGGATCTCAGTGGTGTCAAT+GGG + chr1_4:56056347-56056366 Msa0171350:intron 50.0%
CAATGGGAAGCGAGAGGTAA+AGG + chr1_4:56056363-56056382 Msa0171350:intron 50.0%
GTCTGGGTTGTGTCAAAGCT+TGG + chr1_4:56056445-56056464 Msa0171350:intron 50.0%
GCTAATCCAAGTTCAGCGGA+TGG + chr1_4:56056577-56056596 Msa0171350:intron 50.0%
CAGCGGATGGATCCAGTTAA+AGG + chr1_4:56056590-56056609 Msa0171350:intron 50.0%
GCGGATGGATCCAGTTAAAG+GGG + chr1_4:56056592-56056611 Msa0171350:intron 50.0%
ACCACTGGTGCATATATGGG+AGG + chr1_4:56058388-56058407 Msa0171350:intron 50.0%
CCACTGGTGCATATATGGGA+GGG + chr1_4:56058389-56058408 Msa0171350:intron 50.0%
! TTTTGATGCATGCCCGCTCT+AGG + chr1_4:56058873-56058892 Msa0171350:intron 50.0%
! GGGTGCCTGATTTTCTAACG+GGG + chr1_4:56058985-56059004 Msa0171350:intron 50.0%
AGGTTTGCCCTTCAGGGTAA+AGG - chr1_4:56059109-56059128 None:intergenic 50.0%
ATCAGCAGGTTTGCCCTTCA+GGG - chr1_4:56059115-56059134 None:intergenic 50.0%
TCACTAATTGTACACCGGGG+AGG - chr1_4:56059461-56059480 None:intergenic 50.0%
!! GGTGGTGGATAAGGAGATCA+GGG - chr1_4:56059637-56059656 None:intergenic 50.0%
GTGCTCACTGAAATCTGGTG+TGG - chr1_4:56059838-56059857 None:intergenic 50.0%
GCATGGTGCTCACTGAAATC+TGG - chr1_4:56059843-56059862 None:intergenic 50.0%
GAGCCTGAAAACGACAAGGA+TGG + chr1_4:56059912-56059931 Msa0171350:CDS 50.0%
!!! CACCCATCCTTGTCGTTTTC+AGG - chr1_4:56059918-56059937 None:intergenic 50.0%
CTGAAAACGACAAGGATGGG+TGG + chr1_4:56059916-56059935 Msa0171350:CDS 50.0%
AAGGGTTTGGCCCTTGTAGT+GGG - chr1_4:56060704-56060723 None:intergenic 50.0%
TAAGGGTTTGGCCCTTGTAG+TGG - chr1_4:56060705-56060724 None:intergenic 50.0%
AGGGCCAAACCCTTATTAGC+TGG + chr1_4:56060710-56060729 Msa0171350:CDS 50.0%
CCGACATCTGCCAGCTAATA+AGG - chr1_4:56060723-56060742 None:intergenic 50.0%
!!! GCACCTAATTTTGGAGCAGC+AGG - chr1_4:56060755-56060774 None:intergenic 50.0%
TAGGTGCTCAGCGGATAATC+CGG + chr1_4:56060768-56060787 Msa0171350:CDS 50.0%
CAATTTGGTTACACCCCGGA+TGG - chr1_4:56060797-56060816 None:intergenic 50.0%
GTGGCAATTTGGTTACACCC+CGG - chr1_4:56060801-56060820 None:intergenic 50.0%
! TTCTTTTGTGCCCTGGCAAG+TGG - chr1_4:56060820-56060839 None:intergenic 50.0%
! TCCTCGTTTCTTTTGTGCCC+TGG - chr1_4:56060827-56060846 None:intergenic 50.0%
GAGATCGTTGAGGCCAGTTC+CGG - chr1_4:56050027-56050046 None:intergenic 55.0%
GCGAACCTTACTCTTCCGCT+TGG + chr1_4:56050060-56050079 Msa0171350:CDS 55.0%
ATGAAGCCAAGAGCCCCAAG+CGG - chr1_4:56050078-56050097 None:intergenic 55.0%
GGCTCTTGGCTTCATCATCG+CGG + chr1_4:56050083-56050102 Msa0171350:CDS 55.0%
TCATCATCGCGGCACTTCCA+AGG + chr1_4:56050094-56050113 Msa0171350:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr1_4:56051261-56051280 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr1_4:56051260-56051279 Msa0171350:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr1_4:56051261-56051280 Msa0171350:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr1_4:56051267-56051286 Msa0171350:intron 55.0%
CCCCAAGAATCAATGGCCCA+TGG - chr1_4:56052471-56052490 None:intergenic 55.0%
!! GGCCATTGATTCTTGGGGCA+TGG + chr1_4:56052473-56052492 Msa0171350:CDS 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr1_4:56053071-56053090 None:intergenic 55.0%
CTCCCGCATACATAGGGTCT+GGG + chr1_4:56053082-56053101 Msa0171350:intron 55.0%
CGCATACATAGGGTCTGGGA+AGG + chr1_4:56053086-56053105 Msa0171350:intron 55.0%
! AAGGGGTCCCACCATTTTGG+TGG + chr1_4:56053105-56053124 Msa0171350:intron 55.0%
GCATGGACTTCAGCAACCAC+TGG - chr1_4:56054117-56054136 None:intergenic 55.0%
! TGGTTCCTGGCTTTCAGCTG+AGG + chr1_4:56055273-56055292 Msa0171350:CDS 55.0%
GAACTCCTCAGCTGAAAGCC+AGG - chr1_4:56055281-56055300 None:intergenic 55.0%
AGCTGAGGAGTTCCGTGTCA+AGG + chr1_4:56055288-56055307 Msa0171350:CDS 55.0%
ACGCACAGCTCGATCATTGG+AGG - chr1_4:56055428-56055447 None:intergenic 55.0%
GACACGCACAGCTCGATCAT+TGG - chr1_4:56055431-56055450 None:intergenic 55.0%
! TGGTGTCAATGGGAAGCGAG+AGG + chr1_4:56056357-56056376 Msa0171350:intron 55.0%
CTGGATCCATCCGCTGAACT+TGG - chr1_4:56056586-56056605 None:intergenic 55.0%
CCCTCCCATATATGCACCAG+TGG - chr1_4:56058392-56058411 None:intergenic 55.0%
!! ATGCATGCCCGCTCTAGGAA+AGG + chr1_4:56058878-56058897 Msa0171350:intron 55.0%
GATCAGCAGGTTTGCCCTTC+AGG - chr1_4:56059116-56059135 None:intergenic 55.0%
GCAACTGGAGCATGATCAGC+AGG - chr1_4:56059129-56059148 None:intergenic 55.0%
!! GGGTGGTGGATAAGGAGATC+AGG - chr1_4:56059638-56059657 None:intergenic 55.0%
CTCCTTATCCACCACCCTTG+AGG + chr1_4:56059641-56059660 Msa0171350:intron 55.0%
!! TGCCTCAAGGGTGGTGGATA+AGG - chr1_4:56059646-56059665 None:intergenic 55.0%
CATCTTTGCCTCAAGGGTGG+TGG - chr1_4:56059652-56059671 None:intergenic 55.0%
GACTGGGGGGAACTAGAGAA+TGG + chr1_4:56059879-56059898 Msa0171350:CDS 55.0%
CGAGGAGCCTGAAAACGACA+AGG + chr1_4:56059908-56059927 Msa0171350:CDS 55.0%
AGCTCCTGCACCCACTACAA+GGG + chr1_4:56060691-56060710 Msa0171350:CDS 55.0%
CGGATAATCCGGACACCATC+CGG + chr1_4:56060779-56060798 Msa0171350:CDS 55.0%
GGATAATCCGGACACCATCC+GGG + chr1_4:56060780-56060799 Msa0171350:CDS 55.0%
GATAATCCGGACACCATCCG+GGG + chr1_4:56060781-56060800 Msa0171350:CDS 55.0%
TGCCCTGGCAAGTGGCAATT+TGG - chr1_4:56060812-56060831 None:intergenic 55.0%
GCCAGGGCACAAAAGAAACG+AGG + chr1_4:56060823-56060842 Msa0171350:three_prime_UTR 55.0%
GAGCCCCAAGCGGAAGAGTA+AGG - chr1_4:56050068-56050087 None:intergenic 60.0%
ACTCTTCCGCTTGGGGCTCT+TGG + chr1_4:56050069-56050088 Msa0171350:CDS 60.0%
!! AACGGGCTGCTTCCACGAAG+AGG + chr1_4:56052891-56052910 Msa0171350:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr1_4:56053070-56053089 None:intergenic 60.0%
GCTCCCGCATACATAGGGTC+TGG + chr1_4:56053081-56053100 Msa0171350:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr1_4:56053102-56053121 Msa0171350:intron 60.0%
! TCAGCAGAGGAAGGGTGCAC+CGG + chr1_4:56053276-56053295 Msa0171350:intron 60.0%
! CTAGAGGCTACTGAGGGTGC+AGG + chr1_4:56058726-56058745 Msa0171350:CDS 60.0%
! GCTACTGAGGGTGCAGGCAT+GGG + chr1_4:56058732-56058751 Msa0171350:CDS 60.0%
CTACATCGACCGGTGACTGG+GGG + chr1_4:56059865-56059884 Msa0171350:CDS 60.0%
TACATCGACCGGTGACTGGG+GGG + chr1_4:56059866-56059885 Msa0171350:CDS 60.0%
! CTCTAGTTCCCCCCAGTCAC+CGG - chr1_4:56059877-56059896 None:intergenic 60.0%
! CTGATGATGCTGCTGCTGCC+CGG + chr1_4:56060657-56060676 Msa0171350:CDS 60.0%
! TGATGATGCTGCTGCTGCCC+GGG + chr1_4:56060658-56060677 Msa0171350:CDS 60.0%
CAGCTCCTGCACCCACTACA+AGG + chr1_4:56060690-56060709 Msa0171350:CDS 60.0%
!! TTGGCCCTTGTAGTGGGTGC+AGG - chr1_4:56060698-56060717 None:intergenic 60.0%
GTTACACCCCGGATGGTGTC+CGG - chr1_4:56060790-56060809 None:intergenic 60.0%
! GGCTACTGAGGGTGCAGGCA+TGG + chr1_4:56058731-56058750 Msa0171350:CDS 65.0%
AGTGGGTGCAGGAGCTGCAC+TGG - chr1_4:56060687-56060706 None:intergenic 65.0%
! AGGAGCTGCACTGGCAGCCC+GGG - chr1_4:56060678-56060697 None:intergenic 70.0%
! CAGGAGCTGCACTGGCAGCC+CGG - chr1_4:56060679-56060698 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 56049865 56061046 56049865 ID=Msa0171350;Name=Msa0171350
chr1_4 mRNA 56049865 56061046 56049865 ID=Msa0171350-mRNA-1;Parent=Msa0171350;Name=Msa0171350-mRNA-1;_AED=0.14;_eAED=0.14;_QI=125|0.95|0.95|1|1|1|21|238|779
chr1_4 exon 56049865 56050115 56049865 ID=Msa0171350-mRNA-1:exon:16862;Parent=Msa0171350-mRNA-1
chr1_4 exon 56050187 56050285 56050187 ID=Msa0171350-mRNA-1:exon:16863;Parent=Msa0171350-mRNA-1
chr1_4 exon 56050543 56050694 56050543 ID=Msa0171350-mRNA-1:exon:16864;Parent=Msa0171350-mRNA-1
chr1_4 exon 56051632 56051704 56051632 ID=Msa0171350-mRNA-1:exon:16865;Parent=Msa0171350-mRNA-1
chr1_4 exon 56051794 56051916 56051794 ID=Msa0171350-mRNA-1:exon:16866;Parent=Msa0171350-mRNA-1
chr1_4 exon 56052387 56052495 56052387 ID=Msa0171350-mRNA-1:exon:16867;Parent=Msa0171350-mRNA-1
chr1_4 exon 56053897 56053976 56053897 ID=Msa0171350-mRNA-1:exon:16868;Parent=Msa0171350-mRNA-1
chr1_4 exon 56054097 56054178 56054097 ID=Msa0171350-mRNA-1:exon:16869;Parent=Msa0171350-mRNA-1
chr1_4 exon 56054970 56055113 56054970 ID=Msa0171350-mRNA-1:exon:16870;Parent=Msa0171350-mRNA-1
chr1_4 exon 56055239 56055309 56055239 ID=Msa0171350-mRNA-1:exon:16871;Parent=Msa0171350-mRNA-1
chr1_4 exon 56055397 56055513 56055397 ID=Msa0171350-mRNA-1:exon:16872;Parent=Msa0171350-mRNA-1
chr1_4 exon 56055637 56055726 56055637 ID=Msa0171350-mRNA-1:exon:16873;Parent=Msa0171350-mRNA-1
chr1_4 exon 56056971 56057024 56056971 ID=Msa0171350-mRNA-1:exon:16874;Parent=Msa0171350-mRNA-1
chr1_4 exon 56057310 56057384 56057310 ID=Msa0171350-mRNA-1:exon:16875;Parent=Msa0171350-mRNA-1
chr1_4 exon 56057490 56057565 56057490 ID=Msa0171350-mRNA-1:exon:16876;Parent=Msa0171350-mRNA-1
chr1_4 exon 56057672 56057771 56057672 ID=Msa0171350-mRNA-1:exon:16877;Parent=Msa0171350-mRNA-1
chr1_4 exon 56057898 56057967 56057898 ID=Msa0171350-mRNA-1:exon:16878;Parent=Msa0171350-mRNA-1
chr1_4 exon 56058720 56058790 56058720 ID=Msa0171350-mRNA-1:exon:16879;Parent=Msa0171350-mRNA-1
chr1_4 exon 56059092 56059198 56059092 ID=Msa0171350-mRNA-1:exon:16880;Parent=Msa0171350-mRNA-1
chr1_4 exon 56059796 56060041 56059796 ID=Msa0171350-mRNA-1:exon:16881;Parent=Msa0171350-mRNA-1
chr1_4 exon 56060534 56061046 56060534 ID=Msa0171350-mRNA-1:exon:16882;Parent=Msa0171350-mRNA-1
chr1_4 five_prime_UTR 56049865 56049989 56049865 ID=Msa0171350-mRNA-1:five_prime_utr;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56049990 56050115 56049990 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56050187 56050285 56050187 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56050543 56050694 56050543 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56051632 56051704 56051632 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56051794 56051916 56051794 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56052387 56052495 56052387 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56053897 56053976 56053897 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56054097 56054178 56054097 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56054970 56055113 56054970 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56055239 56055309 56055239 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56055397 56055513 56055397 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56055637 56055726 56055637 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56056971 56057024 56056971 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56057310 56057384 56057310 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56057490 56057565 56057490 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56057672 56057771 56057672 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56057898 56057967 56057898 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56058720 56058790 56058720 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56059092 56059198 56059092 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56059796 56060041 56059796 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 CDS 56060534 56060808 56060534 ID=Msa0171350-mRNA-1:cds;Parent=Msa0171350-mRNA-1
chr1_4 three_prime_UTR 56060809 56061046 56060809 ID=Msa0171350-mRNA-1:three_prime_utr;Parent=Msa0171350-mRNA-1
Gene Sequence

>Msa0171350

ATGTTCAAATTCTTCAAAGATTTTGTAGGTGTATCCGGAACTGGCCTCAACGATCTCCCATACACCATAGGCGAACCTTACTCTTCCGCTTGGGGCTCTTGGCTTCATCATCGCGGCACTTCCAAGGACGATGGTTCACCGGTTTCAATTTTTTCATTATCTGGAAGTAATGCTCAGGATGGACATTTAGCTGCGGGTCGTAACGGTGTCAAGCGATTACGAACTGTTAGGCATCCGAATATTTTGTCGTTTCTTCATAGTACCGAGATTGAAACTTTTGATGGTGGTTCTTCGAAGGTCACGATTTATATCGTGACTGAACCTGTAATGCCATTGTCTGATAAGATTAAGGAGTTAGGTCTTGAAGGTGCACAAAGGGATGAATATTATGCTTGGGGACTGCATCAGATAGCGAAAGCCGTGAGCTTCTTAAATAATGACTGTAAACTTATTCATGGTAATGTTTGCTTGGCCAGTGTTGTTGTCACACAGACTTTAGACTGGAAACTCCACGCTTTTGATGTTTTATCAGAGTTTGATGGGAGTAATGAGCCATCCTCTACGCAAATGTTGCGATATGCATGGCTTGTTGCAACACAGTACCAATCAATGGAGCTGGCAAAATCTGACTGGGCTGTTATTAAGAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGCTGTCTAATCTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAGGAGTTAGGCAACACTGCATCCATTCCCAAGTCTCTGCTTCCAGATTACCAGTGGTTGCTGAAGTCCATGCCTTCTCATAGATTAAATACATCAAAGCTTATAGAGAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTCGAGAAGGACACCTTCTTCCGCAAGCTTCCAAATTCAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGGTATCTGCTGCCCCCGCTTTGACTGCATTGTTAAAAATTGGTTCCTGGCTTTCAGCTGAGGAGTTCCGTGTCAAGGTTCTTCCAACAATAATTAAACTCTTTGCCTCCAATGATCGAGCTGTGCGTGTCAGCCTTCTCCAACATATTGATCAATATGGAGAGTCATTATCAGCTCAAGCTGTTGATGAACATGTTTACCCTCATGTTGCTACTGGTTTCTCTGATGCATCTGCTTTTCTGAGGGAACTTACTCTTAAGTCCATGTTAGTTCTGGCTCCGAAGCTGTCTCAAAGGACCTTGTCTGTGTCATTATTAAGGCATCTATCAACGTTACAGCTTGATGAAGAGCCAGCTATTAGAACAAACACTACTATCTTGCTAGGAAATATTGCAAGCTACTTAAAAGAAGGGACAAGAAAAAAAGTTTTGATTAATGCATTTGCAGTTCGTGCTTTACATGATACCTTTCCACATGCTAGAGTAGCAGGCATTATGGCTTTATGTTCCACCAGTTCCAACTATGACATCACTGAAATTGCCACTAGGATTCTTCCTAATGTTGTTGTACTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTACAGATGACAAAGCAACATTATGAAAAGACAAATCTAGAGGCTACTGAGGGTGCAGGCATGGGAAGCTCATCAATTCCAGCAAATGCAAGTTTACTTGGATGGGCTATGAGTTCCTTTACCCTGAAGGGCAAACCTGCTGATCATGCTCCAGTTGCTTCTGTGAGTTCTAGTGCCCTTACACCAACATCTTCTATTGCCAGCTCAGTTGTAGATACTCCTTCAACAGCACCTATCTGTGTAAATTCCACACCAGATTTCAGTGAGCACCATGCTTCTACATCGACCGGTGACTGGGGGGAACTAGAGAATGGAATTGACGAGGAGCCTGAAAACGACAAGGATGGGTGGGAAGATCTAGAACCACTTGAAGAGACAAAGCCAACTCCAGCTGTTACTAACATTCAAGCAGATCAAAGGCGGCCAGTTTCTCAACCTGTTTCACAGACAAACGTTGCAAGTTTGCGACCCAAAACTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGCGGTGCTAGCGCAGCTCCTGCTCCAAAAACATCAAAATCTTTAAATTTGAAATCAACTGCAGCTGATGATGCTGCTGCTGCCCGGGCTGCCAGTGCAGCTCCTGCACCCACTACAAGGGCCAAACCCTTATTAGCTGGCAGATGTCGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGGATAATCCGGACACCATCCGGGGTGTAA
Protein sequence

>Msa0171350

MFKFFKDFVGVSGTGLNDLPYTIGEPYSSAWGSWLHHRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKIKELGLEGAQRDEYYAWGLHQIAKAVSFLNNDCKLIHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNEPSSTQMLRYAWLVATQYQSMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELGNTASIPKSLLPDYQWLLKSMPSHRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNSAEQLPRQIVLKKVSAAPALTALLKIGSWLSAEEFRVKVLPTIIKLFASNDRAVRVSLLQHIDQYGESLSAQAVDEHVYPHVATGFSDASAFLRELTLKSMLVLAPKLSQRTLSVSLLRHLSTLQLDEEPAIRTNTTILLGNIASYLKEGTRKKVLINAFAVRALHDTFPHARVAGIMALCSTSSNYDITEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQMTKQHYEKTNLEATEGAGMGSSSIPANASLLGWAMSSFTLKGKPADHAPVASVSSSALTPTSSIASSVVDTPSTAPICVNSTPDFSEHHASTSTGDWGELENGIDEEPENDKDGWEDLEPLEETKPTPAVTNIQADQRRPVSQPVSQTNVASLRPKTTPKLSKDEDDDLCGASAAPAPKTSKSLNLKSTAADDAAAARAASAAPAPTTRAKPLLAGRCRGAKPAAPKLGAQRIIRTPSGV*