AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0172790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172790 MtrunA17_Chr1g0192411 60.500 400 72 14 2 348 4 370 3.24e-139 401
Msa0172790 MtrunA17_Chr1g0154031 49.624 133 51 2 32 154 78 204 1.88e-34 130
Msa0172790 MtrunA17_Chr8g0354661 53.509 114 43 1 32 135 39 152 1.02e-32 128
Msa0172790 MtrunA17_Chr3g0099131 52.586 116 45 1 29 134 40 155 2.16e-32 127
Msa0172790 MtrunA17_Chr3g0080861 49.123 114 48 1 32 135 39 152 3.35e-31 123
Msa0172790 MtrunA17_Chr2g0322521 47.143 140 44 2 8 137 27 146 1.07e-30 120
Msa0172790 MtrunA17_Chr5g0440781 39.011 182 88 6 32 201 14 184 3.68e-29 111
Msa0172790 MtrunA17_Chr5g0440761 39.011 182 88 6 32 201 14 184 1.33e-28 112
Msa0172790 MtrunA17_Chr5g0441141 39.011 182 88 6 32 201 14 184 1.50e-28 112
Msa0172790 MtrunA17_Chr3g0099141 59.036 83 34 0 29 111 39 121 6.22e-27 103
Msa0172790 MtrunA17_Chr5g0410961 36.111 180 90 5 32 192 14 187 4.68e-26 106
Msa0172790 MtrunA17_Chr5g0441131 38.418 177 80 6 32 197 11 169 5.18e-26 102
Msa0172790 MtrunA17_Chr6g0453471 41.228 114 56 2 32 134 14 127 1.78e-24 102
Msa0172790 MtrunA17_Chr7g0274581 43.269 104 49 1 32 125 14 117 1.82e-24 99.4
Msa0172790 MtrunA17_Chr5g0435101 36.478 159 82 5 29 168 10 168 3.37e-24 98.6
Msa0172790 MtrunA17_Chr4g0042671 35.915 142 79 3 32 161 14 155 5.13e-24 102
Msa0172790 MtrunA17_Chr1g0151941 36.496 137 72 3 33 154 15 151 7.19e-24 99.0
Msa0172790 MtrunA17_Chr6g0453751 53.763 93 34 3 28 111 18 110 7.60e-24 95.5
Msa0172790 MtrunA17_Chr1g0152011 46.226 106 46 2 29 123 11 116 1.10e-23 100
Msa0172790 MtrunA17_Chr1g0209661 43.689 103 48 1 33 125 30 132 1.44e-23 99.4
Msa0172790 MtrunA17_Chr2g0330041 34.731 167 88 4 33 187 15 172 1.68e-23 100
Msa0172790 MtrunA17_Chr1g0167661 29.630 216 133 4 32 231 14 226 1.82e-23 97.8
Msa0172790 MtrunA17_Chr1g0187761 53.165 79 37 0 33 111 15 93 2.03e-23 97.8
Msa0172790 MtrunA17_Chr1g0193801 42.308 130 60 3 26 140 8 137 2.03e-23 100
Msa0172790 MtrunA17_Chr8g0385321 40.800 125 58 2 32 146 14 132 2.36e-23 98.6
Msa0172790 MtrunA17_Chr2g0281071 41.593 113 55 2 32 133 15 127 2.49e-23 99.4
Msa0172790 MtrunA17_Chr7g0228231 44.231 104 48 1 32 125 16 119 3.23e-23 95.9
Msa0172790 MtrunA17_Chr1g0203411 40.566 106 53 1 33 128 15 120 3.27e-23 97.8
Msa0172790 MtrunA17_Chr7g0217741 40.351 114 57 2 32 134 14 127 3.64e-23 98.2
Msa0172790 MtrunA17_Chr4g0048511 29.665 209 103 5 33 206 16 215 4.54e-23 98.6
Msa0172790 MtrunA17_Chr6g0450101 45.192 104 47 1 32 125 16 119 4.63e-23 95.5
Msa0172790 MtrunA17_Chr5g0400821 45.283 106 47 2 29 123 11 116 5.16e-23 97.8
Msa0172790 MtrunA17_Chr6g0452271 40.769 130 66 2 29 147 11 140 5.80e-23 98.2
Msa0172790 MtrunA17_Chr5g0425591 52.439 82 38 1 33 113 12 93 6.63e-23 91.7
Msa0172790 MtrunA17_Chr1g0167691 42.157 102 49 1 32 123 14 115 7.86e-23 95.9
Msa0172790 MtrunA17_Chr8g0346561 42.308 104 50 1 32 125 14 117 8.05e-23 97.1
Msa0172790 MtrunA17_Chr3g0115821 38.095 126 67 2 32 146 14 139 1.17e-22 97.4
Msa0172790 MtrunA17_Chr4g0054391 48.000 100 41 2 29 117 11 110 1.18e-22 96.3
Msa0172790 MtrunA17_Chr5g0417821 39.474 114 58 2 32 134 9 122 1.44e-22 95.9
Msa0172790 MtrunA17_Chr7g0261281 41.739 115 53 2 32 136 14 124 1.53e-22 95.9
Msa0172790 MtrunA17_Chr4g0044421 36.184 152 81 4 32 172 14 160 2.42e-22 93.2
Msa0172790 MtrunA17_Chr7g0264641 38.760 129 50 2 5 123 7 116 2.58e-22 95.1
Msa0172790 MtrunA17_Chr4g0037141 42.157 102 49 1 32 123 14 115 2.73e-22 95.1
Msa0172790 MtrunA17_Chr3g0131121 38.519 135 71 3 32 155 14 147 3.28e-22 95.1
Msa0172790 MtrunA17_Chr1g0193371 42.727 110 53 1 26 125 8 117 3.45e-22 96.3
Msa0172790 MtrunA17_Chr3g0135311 43.396 106 49 2 29 123 11 116 3.94e-22 95.9
Msa0172790 MtrunA17_Chr3g0121241 42.574 101 48 1 33 123 45 145 5.34e-22 94.7
Msa0172790 MtrunA17_Chr1g0211161 40.152 132 65 3 23 143 9 137 5.81e-22 93.2
Msa0172790 MtrunA17_Chr7g0270891 41.818 110 54 1 26 125 8 117 5.94e-22 95.5
Msa0172790 MtrunA17_Chr4g0022911 44.660 103 47 1 32 124 15 117 6.04e-22 94.4
Msa0172790 MtrunA17_Chr4g0022931 43.269 104 49 1 32 125 15 118 6.54e-22 94.0
Msa0172790 MtrunA17_Chr7g0275911 41.748 103 50 1 33 125 15 117 6.61e-22 93.6
Msa0172790 MtrunA17_Chr4g0022901 45.098 102 46 1 32 123 15 116 6.80e-22 94.0
Msa0172790 MtrunA17_Chr4g0028311 40.351 114 56 3 33 134 15 128 9.23e-22 94.4
Msa0172790 MtrunA17_Chr1g0168661 42.609 115 54 2 21 125 14 126 1.01e-21 93.2
Msa0172790 MtrunA17_Chr3g0103281 33.929 168 87 3 29 172 11 178 1.18e-21 94.0
Msa0172790 MtrunA17_Chr7g0228891 42.478 113 54 2 33 134 15 127 1.26e-21 93.2
Msa0172790 MtrunA17_Chr7g0271241 47.727 88 46 0 26 113 8 95 1.41e-21 94.7
Msa0172790 MtrunA17_Chr1g0186061 43.396 106 50 1 30 125 20 125 2.28e-21 92.0
Msa0172790 MtrunA17_Chr4g0032401 42.975 121 57 3 32 142 19 137 2.51e-21 93.2
Msa0172790 MtrunA17_Chr4g0039971 41.593 113 55 2 32 133 15 127 2.85e-21 93.6
Msa0172790 MtrunA17_Chr1g0194291 41.346 104 51 1 32 125 23 126 2.88e-21 92.0
Msa0172790 MtrunA17_Chr2g0323411 43.137 102 48 1 32 123 14 115 2.94e-21 93.2
Msa0172790 MtrunA17_Chr3g0117091 42.342 111 51 2 23 123 8 115 2.94e-21 93.6
Msa0172790 MtrunA17_Chr2g0327351 45.000 100 44 2 29 117 11 110 3.20e-21 92.8
Msa0172790 MtrunA17_Chr8g0342541 44.554 101 46 1 33 123 15 115 3.93e-21 93.2
Msa0172790 MtrunA17_Chr4g0022881 43.269 104 49 1 32 125 14 117 5.31e-21 90.5
Msa0172790 MtrunA17_Chr4g0022891 50.000 82 41 0 32 113 14 95 5.50e-21 90.5
Msa0172790 MtrunA17_Chr4g0057031 40.351 114 57 2 32 134 14 127 6.09e-21 91.3
Msa0172790 MtrunA17_Chr7g0217221 41.346 104 51 1 32 125 14 117 6.88e-21 90.9
Msa0172790 MtrunA17_Chr8g0349261 39.130 115 58 3 32 134 15 129 1.03e-20 90.9
Msa0172790 MtrunA17_Chr1g0194301 39.423 104 53 1 32 125 35 138 1.18e-20 90.5
Msa0172790 MtrunA17_Chr1g0203441 40.708 113 57 1 32 134 15 127 1.36e-20 90.1
Msa0172790 MtrunA17_Chr8g0342521 44.554 101 46 1 33 123 15 115 1.68e-20 91.3
Msa0172790 MtrunA17_Chr2g0328771 42.308 104 50 1 32 125 22 125 1.71e-20 90.9
Msa0172790 MtrunA17_Chr4g0058631 39.823 113 55 2 21 123 6 115 1.82e-20 91.3
Msa0172790 MtrunA17_Chr4g0072751 39.837 123 45 2 5 117 7 110 1.83e-20 91.3
Msa0172790 MtrunA17_Chr3g0110351 38.655 119 62 2 32 139 14 132 1.92e-20 90.5
Msa0172790 MtrunA17_Chr4g0060721 41.176 102 50 1 32 123 15 116 2.00e-20 90.9
Msa0172790 MtrunA17_Chr4g0042611 47.945 73 38 0 32 104 14 86 2.29e-20 84.7
Msa0172790 MtrunA17_Chr5g0434571 37.405 131 71 2 32 151 50 180 2.47e-20 90.9
Msa0172790 MtrunA17_Chr2g0323351 49.367 79 40 0 32 110 14 92 2.64e-20 89.0
Msa0172790 MtrunA17_Chr4g0068061 41.176 102 50 1 32 123 14 115 3.32e-20 90.1
Msa0172790 MtrunA17_Chr6g0453211 42.708 96 45 1 32 117 14 109 4.94e-20 89.4
Msa0172790 MtrunA17_Chr2g0311221 53.947 76 35 0 33 108 17 92 5.19e-20 89.7
Msa0172790 MtrunA17_Chr5g0395281 37.405 131 68 3 32 151 14 141 6.48e-20 89.0
Msa0172790 MtrunA17_Chr3g0092401 32.886 149 82 2 32 170 15 155 7.28e-20 89.0
Msa0172790 MtrunA17_Chr8g0360111 44.944 89 46 1 26 111 18 106 7.49e-20 87.8
Msa0172790 MtrunA17_Chr4g0070641 40.385 104 52 1 32 125 14 117 8.49e-20 85.5
Msa0172790 MtrunA17_Chr1g0180391 40.171 117 60 1 29 135 18 134 1.01e-19 87.0
Msa0172790 MtrunA17_Chr4g0070611 40.777 103 51 1 33 125 15 117 1.04e-19 88.2
Msa0172790 MtrunA17_Chr8g0342511 52.778 72 34 0 33 104 15 86 1.04e-19 83.2
Msa0172790 MtrunA17_Chr3g0088461 41.346 104 51 1 32 125 24 127 1.21e-19 88.6
Msa0172790 MtrunA17_Chr8g0343831 41.346 104 51 1 32 125 10 113 1.32e-19 87.0
Msa0172790 MtrunA17_Chr8g0387421 39.806 103 52 1 33 125 15 117 1.34e-19 88.2
Msa0172790 MtrunA17_Chr4g0013361 43.220 118 54 4 24 129 3 119 1.37e-19 87.8
Msa0172790 MtrunA17_Chr7g0254411 41.176 102 50 1 32 123 14 115 1.57e-19 88.2
Msa0172790 MtrunA17_Chr2g0309911 40.351 114 57 2 33 135 14 127 1.60e-19 87.8
Msa0172790 MtrunA17_Chr8g0342531 38.679 106 64 1 32 136 14 119 1.63e-19 84.7
Msa0172790 MtrunA17_Chr5g0434931 37.615 109 58 1 25 123 30 138 1.64e-19 87.4
Msa0172790 MtrunA17_Chr5g0434841 40.000 110 56 1 25 124 15 124 1.69e-19 87.8
Msa0172790 MtrunA17_Chr7g0228991 38.318 107 56 1 28 124 27 133 2.82e-19 86.7
Msa0172790 MtrunA17_Chr6g0470971 42.308 104 50 1 30 123 14 117 4.19e-19 86.3
Msa0172790 MtrunA17_Chr5g0397231 43.158 95 44 1 33 117 15 109 5.83e-19 86.7
Msa0172790 MtrunA17_Chr7g0240821 42.718 103 49 1 31 123 2 104 6.35e-19 84.7
Msa0172790 MtrunA17_Chr2g0327821 37.719 114 58 2 22 125 1 111 9.26e-19 84.3
Msa0172790 MtrunA17_Chr8g0342481 43.137 102 47 2 33 123 15 116 1.16e-18 86.7
Msa0172790 MtrunA17_Chr6g0487491 32.335 167 68 4 5 153 7 146 1.19e-18 84.7
Msa0172790 MtrunA17_Chr2g0323321 45.570 79 43 0 32 110 13 91 1.22e-18 80.5
Msa0172790 MtrunA17_Chr4g0055981 43.158 95 44 1 33 117 58 152 1.48e-18 83.6
Msa0172790 MtrunA17_Chr1g0194951 48.101 79 41 0 33 111 15 93 1.53e-18 85.9
Msa0172790 MtrunA17_Chr5g0434911 37.383 107 57 1 27 123 18 124 2.23e-18 84.0
Msa0172790 MtrunA17_Chr5g0395221 46.667 75 40 0 32 106 14 88 3.58e-18 78.6
Msa0172790 MtrunA17_Chr8g0342461 46.154 91 45 2 18 107 3 90 4.30e-18 80.1
Msa0172790 MtrunA17_Chr5g0434831 37.273 110 59 1 25 124 2 111 4.80e-18 81.3
Msa0172790 MtrunA17_Chr8g0334881 41.228 114 53 3 24 126 7 117 6.32e-18 83.6
Msa0172790 MtrunA17_Chr4g0030881 37.615 109 51 2 32 123 9 117 7.79e-18 82.0
Msa0172790 MtrunA17_Chr8g0342471 45.055 91 46 2 18 107 3 90 1.49e-17 78.6
Msa0172790 MtrunA17_Chr2g0294811 45.000 80 44 0 32 111 14 93 3.02e-17 77.0
Msa0172790 MtrunA17_Chr7g0220341 37.143 105 54 2 32 124 27 131 3.89e-17 80.5
Msa0172790 MtrunA17_Chr2g0293911 41.748 103 50 1 33 125 27 129 5.52e-17 80.9
Msa0172790 MtrunA17_Chr4g0068921 41.346 104 51 1 32 125 26 129 7.76e-17 77.8
Msa0172790 MtrunA17_Chr4g0008551 37.255 153 75 5 32 170 38 183 1.49e-16 79.7
Msa0172790 MtrunA17_Chr7g0247131 43.902 82 35 2 64 134 12 93 7.68e-16 76.6
Msa0172790 MtrunA17_Chr7g0269831 44.792 96 43 1 32 117 14 109 9.10e-16 77.4
Msa0172790 MtrunA17_Chr6g0460661 43.243 74 41 1 35 108 19 91 3.15e-15 72.8
Msa0172790 MtrunA17_Chr1g0193901 53.659 82 37 1 35 115 17 98 3.89e-15 70.9
Msa0172790 MtrunA17_Chr1g0193891 53.659 82 37 1 35 115 17 98 3.89e-15 70.9
Msa0172790 MtrunA17_Chr1g0193871 53.659 82 37 1 35 115 17 98 3.89e-15 70.9
Msa0172790 MtrunA17_Chr1g0193881 53.659 82 37 1 35 115 17 98 3.89e-15 70.9
Msa0172790 MtrunA17_Chr6g0454921 39.175 97 48 2 32 118 15 110 4.96e-15 73.2
Msa0172790 MtrunA17_Chr5g0429661 40.196 102 50 2 32 123 122 222 1.56e-14 73.9
Msa0172790 MtrunA17_Chr6g0480581 41.250 80 46 1 33 112 5 83 2.57e-14 71.6
Msa0172790 MtrunA17_Chr5g0401731 41.975 81 46 1 32 112 15 94 5.10e-14 72.0
Msa0172790 MtrunA17_Chr3g0125801 38.542 96 58 1 17 112 1 95 6.88e-14 71.2
Msa0172790 MtrunA17_Chr3g0133601 33.962 106 59 2 32 127 37 141 7.53e-14 70.1
Msa0172790 MtrunA17_Chr4g0053431 40.741 81 47 1 32 112 5 84 3.32e-13 68.9
Msa0172790 MtrunA17_Chr3g0139671 27.511 229 112 7 7 189 28 248 3.49e-13 70.9
Msa0172790 MtrunA17_Chr5g0417621 40.000 80 47 1 33 112 135 213 4.48e-13 70.1
Msa0172790 MtrunA17_Chr7g0238651 48.000 75 37 1 35 107 10 84 8.20e-13 68.9
Msa0172790 MtrunA17_Chr7g0238631 37.255 102 53 2 32 123 113 213 1.05e-12 69.3
Msa0172790 MtrunA17_Chr7g0238631 47.059 85 39 3 31 112 60 141 5.23e-12 67.0
Msa0172790 MtrunA17_Chr4g0042501 37.805 82 50 1 31 112 104 184 2.25e-12 67.8
Msa0172790 MtrunA17_Chr1g0157731 28.302 159 71 3 7 123 34 191 2.52e-12 68.2
Msa0172790 MtrunA17_Chr4g0058991 35.294 102 55 2 32 123 209 309 1.51e-11 65.5
Msa0172790 MtrunA17_Chr6g0460671 37.500 80 49 1 33 112 100 178 4.74e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0172790 AT5G06100.1 52.542 118 46 1 32 139 34 151 5.00e-35 133
Msa0172790 AT5G06100.5 53.448 116 44 1 32 137 34 149 1.22e-34 133
Msa0172790 AT5G06100.2 53.448 116 44 1 32 137 34 149 1.22e-34 133
Msa0172790 AT5G06100.3 53.448 116 44 1 32 137 34 149 1.22e-34 133
Msa0172790 AT5G06100.4 53.448 116 44 1 32 137 34 149 1.22e-34 133
Msa0172790 AT2G32460.1 50.000 122 51 1 28 139 16 137 1.40e-34 133
Msa0172790 AT2G32460.2 50.000 122 51 1 28 139 4 125 1.42e-34 132
Msa0172790 AT4G26930.1 50.427 117 48 1 32 138 21 137 5.08e-34 129
Msa0172790 AT3G11440.2 52.632 114 44 1 32 135 43 156 2.36e-33 129
Msa0172790 AT3G11440.3 52.632 114 44 1 32 135 43 156 5.84e-33 129
Msa0172790 AT3G11440.4 52.632 114 44 1 32 135 43 156 5.84e-33 129
Msa0172790 AT3G11440.1 52.632 114 44 1 32 135 43 156 5.84e-33 129
Msa0172790 AT2G26960.1 45.185 135 59 2 28 147 18 152 1.30e-32 126
Msa0172790 AT5G55020.1 51.818 110 43 1 32 131 28 137 1.53e-31 125
Msa0172790 AT2G26950.1 32.900 231 129 7 28 245 14 231 7.39e-26 107
Msa0172790 AT3G01530.1 39.370 127 66 2 32 147 27 153 3.87e-25 101
Msa0172790 AT4G01680.3 39.259 135 71 2 26 149 8 142 1.83e-24 100
Msa0172790 AT3G01140.2 37.324 142 77 3 32 162 14 154 2.69e-24 102
Msa0172790 AT3G01140.1 37.324 142 77 3 32 162 57 197 4.41e-24 102
Msa0172790 AT3G13540.1 36.842 152 77 5 33 172 26 170 4.64e-24 99.8
Msa0172790 AT5G15310.4 36.364 143 77 4 32 162 14 154 6.23e-24 99.4
Msa0172790 AT5G14750.1 35.172 145 80 2 30 164 16 156 6.68e-24 98.2
Msa0172790 AT5G40330.1 42.593 108 52 1 30 127 12 119 8.53e-24 98.2
Msa0172790 AT4G01680.1 42.149 121 59 2 26 135 8 128 9.81e-24 100
Msa0172790 AT5G15310.1 36.364 143 77 4 32 162 14 154 1.00e-23 100
Msa0172790 AT5G15310.2 36.364 143 77 4 32 162 14 154 1.02e-23 100
Msa0172790 AT3G27810.1 44.231 104 48 1 32 125 22 125 3.58e-23 96.7
Msa0172790 AT4G38620.1 38.686 137 63 3 32 153 14 144 3.96e-23 97.8
Msa0172790 AT4G21440.1 41.593 113 55 2 32 133 14 126 4.25e-23 99.0
Msa0172790 AT1G34670.1 38.889 126 66 2 32 146 14 139 4.34e-23 99.4
Msa0172790 AT1G48000.1 42.308 104 50 1 33 126 35 138 5.17e-23 96.7
Msa0172790 AT5G23000.1 47.059 102 43 2 33 123 15 116 5.29e-23 98.6
Msa0172790 AT5G40350.1 44.554 101 46 1 32 122 19 119 6.66e-23 95.5
Msa0172790 AT3G61250.1 35.099 151 79 4 32 163 14 164 8.44e-23 97.4
Msa0172790 AT3G49690.1 40.310 129 48 2 5 123 7 116 1.15e-22 97.1
Msa0172790 AT4G05100.1 42.478 113 54 2 32 133 15 127 1.31e-22 97.1
Msa0172790 AT5G57620.1 44.340 106 48 2 29 123 11 116 1.43e-22 97.4
Msa0172790 AT5G16770.4 40.708 113 56 2 32 133 14 126 1.49e-22 97.1
Msa0172790 AT5G16770.3 40.708 113 56 2 32 133 14 126 1.49e-22 97.1
Msa0172790 AT5G65790.1 39.535 129 49 2 5 123 7 116 1.72e-22 97.8
Msa0172790 AT1G74080.1 32.673 202 113 7 32 215 14 210 2.26e-22 96.7
Msa0172790 AT4G17785.2 39.370 127 66 2 32 147 15 141 2.42e-22 97.1
Msa0172790 AT4G28110.1 44.118 102 47 1 32 123 14 115 2.55e-22 95.5
Msa0172790 AT5G16770.1 40.708 113 56 2 32 133 14 126 2.75e-22 96.7
Msa0172790 AT5G16770.2 40.708 113 56 2 32 133 14 126 2.75e-22 96.7
Msa0172790 AT1G25340.1 43.269 104 49 1 32 125 20 123 2.95e-22 95.5
Msa0172790 AT4G17785.1 39.370 127 66 2 32 147 15 141 3.05e-22 96.7
Msa0172790 AT3G02940.2 40.708 113 56 2 32 133 14 126 3.06e-22 95.9
Msa0172790 AT5G26660.1 44.231 104 48 1 32 125 14 117 3.61e-22 96.3
Msa0172790 AT1G57560.2 40.741 135 68 3 26 148 8 142 4.19e-22 94.7
Msa0172790 AT4G37780.1 37.209 129 52 2 5 123 7 116 4.25e-22 95.5
Msa0172790 AT5G60890.1 29.442 197 110 5 32 212 14 197 5.15e-22 95.1
Msa0172790 AT5G56110.1 37.410 139 74 3 29 156 11 147 5.15e-22 95.5
Msa0172790 AT3G02940.1 40.708 113 56 2 32 133 14 126 5.44e-22 95.5
Msa0172790 AT3G02940.3 40.708 113 56 2 32 133 14 126 5.44e-22 95.5
Msa0172790 AT2G16720.1 37.324 142 77 3 32 161 14 155 6.34e-22 94.4
Msa0172790 AT3G27920.1 42.308 104 50 1 30 123 14 117 6.62e-22 93.2
Msa0172790 AT5G10280.1 36.301 146 79 3 32 163 14 159 7.46e-22 95.1
Msa0172790 AT5G65230.1 40.351 114 57 2 32 134 14 127 7.76e-22 94.7
Msa0172790 AT1G09540.1 43.636 110 52 1 26 125 8 117 8.02e-22 95.5
Msa0172790 AT5G61420.2 43.137 102 48 1 32 123 14 115 8.43e-22 95.5
Msa0172790 AT1G18570.1 38.806 134 69 3 32 154 15 146 8.73e-22 95.5
Msa0172790 AT1G35515.1 42.157 102 49 1 32 123 14 115 9.93e-22 92.4
Msa0172790 AT1G68320.1 43.689 103 48 1 33 125 22 124 1.01e-21 94.0
Msa0172790 AT3G13890.2 40.517 116 56 2 18 123 3 115 1.16e-21 95.1
Msa0172790 AT3G30210.1 45.192 104 47 1 32 125 29 132 1.27e-21 93.6
Msa0172790 AT1G16490.1 33.333 171 100 3 33 193 17 183 1.31e-21 93.6
Msa0172790 AT5G07700.1 43.137 102 48 1 32 123 14 115 1.37e-21 94.7
Msa0172790 AT5G07700.2 43.137 102 48 1 32 123 14 115 1.37e-21 94.7
Msa0172790 AT4G22680.1 39.041 146 72 5 32 162 14 157 1.62e-21 93.2
Msa0172790 AT1G57560.1 41.667 120 59 2 26 134 8 127 1.67e-21 94.0
Msa0172790 AT4G09460.1 40.196 102 51 1 32 123 14 115 1.69e-21 92.4
Msa0172790 AT5G07690.1 42.574 101 48 1 32 122 14 114 2.30e-21 94.0
Msa0172790 AT1G18710.1 37.815 119 63 2 27 134 9 127 2.58e-21 92.4
Msa0172790 AT1G74430.1 40.351 114 57 2 32 134 14 127 2.60e-21 92.4
Msa0172790 AT3G24310.1 44.340 106 49 1 30 125 18 123 3.43e-21 92.0
Msa0172790 AT4G01680.2 38.346 133 59 3 26 135 8 140 3.82e-21 93.6
Msa0172790 AT1G79180.1 43.564 101 47 1 33 123 17 117 3.84e-21 92.4
Msa0172790 AT2G36890.1 44.340 106 48 2 29 123 11 116 4.24e-21 92.4
Msa0172790 AT3G23250.1 41.584 101 49 1 33 123 15 115 4.90e-21 92.0
Msa0172790 AT2G36890.2 41.525 118 56 3 29 133 52 169 6.11e-21 92.8
Msa0172790 AT3G12820.1 45.545 101 45 1 33 123 17 117 8.16e-21 90.5
Msa0172790 AT2G31180.1 33.766 154 85 3 33 172 15 165 9.87e-21 90.5
Msa0172790 AT4G13480.1 45.192 104 47 1 32 125 8 111 9.95e-21 90.9
Msa0172790 AT5G54230.1 30.457 197 123 3 32 217 14 207 1.13e-20 91.7
Msa0172790 AT3G28910.1 42.157 102 49 1 32 123 14 115 1.26e-20 91.7
Msa0172790 AT1G22640.1 39.062 128 67 2 32 148 14 141 1.35e-20 90.1
Msa0172790 AT5G16600.1 37.705 122 65 2 32 142 14 135 1.77e-20 91.3
Msa0172790 AT4G34990.1 41.176 102 50 1 32 123 14 115 1.79e-20 90.1
Msa0172790 AT1G74650.1 41.176 102 50 1 32 123 14 115 1.95e-20 91.3
Msa0172790 AT5G14340.1 40.708 113 56 2 33 134 27 139 2.68e-20 89.7
Msa0172790 AT5G49330.1 46.316 95 41 1 33 117 15 109 4.39e-20 90.5
Msa0172790 AT1G08810.1 41.176 102 50 1 32 123 14 115 4.45e-20 89.4
Msa0172790 AT5G62470.2 41.346 104 51 1 32 125 14 117 4.91e-20 90.5
Msa0172790 AT5G12870.1 41.284 109 54 1 27 125 15 123 4.91e-20 89.4
Msa0172790 AT1G06180.1 42.157 102 49 1 32 123 14 115 8.04e-20 87.8
Msa0172790 AT3G47600.1 40.385 104 52 1 32 125 14 117 9.40e-20 89.4
Msa0172790 AT3G53200.1 44.554 101 46 1 33 123 12 112 9.83e-20 87.4
Msa0172790 AT1G25340.2 41.346 104 46 2 32 125 20 118 1.37e-19 87.8
Msa0172790 AT3G12720.1 41.584 101 49 1 33 123 25 125 1.91e-19 88.2
Msa0172790 AT3G08500.1 41.346 104 51 1 32 125 32 135 2.56e-19 88.2
Msa0172790 AT1G25340.3 41.346 104 46 2 32 125 20 118 2.83e-19 87.4
Msa0172790 AT3G13890.1 36.800 125 57 3 18 123 3 124 3.90e-19 87.8
Msa0172790 AT3G48920.1 39.516 124 61 2 32 145 20 139 4.02e-19 86.3
Msa0172790 AT5G59780.3 40.566 106 53 1 30 125 8 113 4.52e-19 85.5
Msa0172790 AT1G56160.1 39.604 101 51 1 33 123 17 117 5.25e-19 86.7
Msa0172790 AT2G47460.1 36.364 132 72 2 33 152 15 146 6.22e-19 87.4
Msa0172790 AT1G63910.1 39.806 103 52 1 33 125 15 117 6.47e-19 87.4
Msa0172790 AT2G47190.1 39.423 104 53 1 32 125 22 125 7.01e-19 85.9
Msa0172790 AT5G35550.1 41.584 101 49 1 33 123 17 117 7.78e-19 85.5
Msa0172790 AT5G62470.1 41.346 104 50 2 32 125 14 116 8.11e-19 87.0
Msa0172790 AT3G28470.1 45.882 85 46 0 29 113 11 95 8.38e-19 86.3
Msa0172790 AT1G66230.1 37.719 114 60 2 32 134 14 127 1.43e-18 85.1
Msa0172790 AT3G62610.1 42.708 96 45 1 32 117 14 109 1.55e-18 85.9
Msa0172790 AT5G52600.1 28.708 209 118 5 24 218 9 200 2.00e-18 82.8
Msa0172790 AT1G66370.1 37.838 111 59 1 23 123 1 111 3.02e-18 83.6
Msa0172790 AT3G46130.1 39.423 104 53 1 32 125 11 114 3.44e-18 83.6
Msa0172790 AT4G25560.1 41.667 108 49 2 30 123 6 113 4.60e-18 83.6
Msa0172790 AT5G49620.1 43.689 103 48 1 33 125 29 131 6.75e-18 83.6
Msa0172790 AT4G12350.1 39.216 102 52 1 32 123 14 115 1.28e-17 82.4
Msa0172790 AT3G06490.1 43.689 103 48 1 33 125 22 124 3.70e-17 81.6
Msa0172790 AT3G60460.1 38.679 106 54 2 32 126 13 118 4.49e-17 81.3
Msa0172790 AT5G62320.1 34.286 140 68 3 5 133 8 134 2.54e-16 78.2
Msa0172790 AT1G79180.2 33.099 142 72 3 5 123 9 150 3.80e-16 79.0
Msa0172790 AT3G50060.1 38.318 107 55 2 32 128 6 111 5.57e-16 78.2
Msa0172790 AT1G66380.1 39.216 102 52 1 32 123 10 111 6.23e-16 74.3
Msa0172790 AT1G17950.1 38.889 108 51 3 33 126 6 112 7.59e-16 76.6
Msa0172790 AT1G66390.1 39.216 102 52 1 32 123 10 111 7.59e-16 76.6
Msa0172790 AT5G67300.1 44.444 81 44 1 32 112 6 85 1.18e-15 77.0
Msa0172790 AT1G56650.1 39.216 102 52 1 32 123 10 111 1.50e-15 75.9
Msa0172790 AT5G52260.1 34.722 144 80 2 32 161 14 157 1.65e-15 76.3
Msa0172790 AT5G11050.1 36.842 114 61 2 20 123 93 205 6.91e-15 75.9
Msa0172790 AT5G58850.1 36.207 116 63 2 18 123 91 205 8.75e-15 75.5
Msa0172790 AT5G49620.2 38.462 117 48 2 33 125 29 145 9.32e-15 74.7
Msa0172790 AT1G66380.2 49.180 61 31 0 32 92 10 70 1.03e-14 70.1
Msa0172790 AT5G17800.1 35.922 103 55 2 33 125 94 195 4.86e-14 72.4
Msa0172790 AT3G55730.1 36.449 107 57 2 27 123 51 156 5.41e-14 73.2
Msa0172790 AT3G09230.1 37.736 106 55 2 28 123 51 155 9.94e-14 72.0
Msa0172790 AT1G73410.1 37.864 103 53 2 33 125 7 108 1.12e-13 70.5
Msa0172790 AT1G73410.2 37.500 104 54 2 32 125 6 108 1.91e-13 68.9
Msa0172790 AT3G27810.2 47.222 72 28 1 64 125 5 76 2.00e-13 68.2
Msa0172790 AT1G26780.1 40.244 82 48 1 31 112 97 177 3.53e-13 69.7
Msa0172790 AT4G33450.1 41.975 81 44 2 33 112 20 98 4.15e-13 68.9
Msa0172790 AT1G26780.2 40.244 82 48 1 31 112 97 177 5.94e-13 69.7
Msa0172790 AT2G39880.1 35.593 118 61 3 32 135 50 166 6.98e-13 69.3
Msa0172790 AT5G40350.2 46.377 69 27 1 64 122 6 74 1.20e-12 65.9
Msa0172790 AT3G09370.1 34.579 107 59 2 32 128 130 235 1.34e-12 69.3
Msa0172790 AT3G09370.2 34.579 107 59 2 32 128 135 240 1.48e-12 68.9
Msa0172790 AT3G09370.3 34.579 107 59 2 32 128 143 248 1.52e-12 68.9
Msa0172790 AT4G37260.1 40.506 79 46 1 32 110 13 90 1.67e-12 68.2
Msa0172790 AT5G14750.3 33.636 110 59 3 65 164 17 122 1.73e-12 65.5
Msa0172790 AT2G23290.1 40.741 81 47 1 32 112 13 92 1.82e-12 67.8
Msa0172790 AT5G26660.2 39.744 78 37 1 58 125 9 86 1.92e-12 67.8
Msa0172790 AT1G69560.1 38.750 80 48 1 33 112 108 186 2.08e-12 67.8
Msa0172790 AT3G29020.2 29.167 120 74 2 33 142 68 186 2.15e-12 67.4
Msa0172790 AT3G29020.1 29.167 120 74 2 33 142 66 184 2.36e-12 66.2
Msa0172790 AT1G69560.2 38.750 80 48 1 33 112 124 202 2.42e-12 67.8
Msa0172790 AT3G53200.2 45.714 70 28 1 64 123 10 79 4.41e-12 65.1
Msa0172790 AT4G32730.5 35.294 102 55 2 32 123 87 187 7.08e-12 67.4
Msa0172790 AT4G32730.4 35.294 102 55 2 32 123 87 187 7.08e-12 67.4
Msa0172790 AT4G32730.3 35.294 102 55 2 32 123 87 187 7.08e-12 67.4
Msa0172790 AT4G32730.2 35.294 102 55 2 32 123 87 187 7.08e-12 67.4
Msa0172790 AT4G32730.1 35.294 102 55 2 32 123 87 187 7.87e-12 67.0
Msa0172790 AT5G02320.1 28.313 166 76 3 9 132 72 236 9.60e-12 66.6
Msa0172790 AT5G02320.2 28.313 166 76 3 9 132 72 236 9.60e-12 66.6
Msa0172790 AT5G02320.3 34.234 111 62 2 32 132 67 176 1.19e-11 66.2
Msa0172790 AT5G02320.3 45.882 85 40 3 31 112 14 95 6.56e-11 63.9
Msa0172790 AT3G12820.2 46.377 69 27 1 65 123 1 69 1.45e-11 63.2
Msa0172790 AT5G40360.1 35.294 102 55 2 31 122 157 257 1.88e-11 65.1
Msa0172790 AT5G39700.1 43.421 76 42 1 33 108 57 131 2.25e-11 62.8
Msa0172790 AT3G46130.3 40.260 77 36 1 59 125 6 82 2.38e-11 63.5
Msa0172790 AT2G37630.1 44.444 81 43 1 35 113 7 87 2.94e-11 64.7
Msa0172790 AT5G59780.2 41.667 72 32 1 64 125 21 92 4.52e-11 62.4
Msa0172790 AT5G11510.3 27.941 136 65 2 9 112 26 160 4.88e-11 64.7
Msa0172790 AT5G11510.1 27.941 136 65 2 9 112 26 160 4.88e-11 64.7
Msa0172790 AT5G11510.4 27.941 136 65 2 9 112 26 160 4.88e-11 64.7
Msa0172790 AT5G11510.2 27.941 136 65 2 9 112 26 160 4.98e-11 64.7
Msa0172790 AT5G11510.5 27.941 136 65 2 9 112 26 160 5.05e-11 64.7
Msa0172790 AT3G46130.4 41.667 72 32 1 64 125 21 92 5.89e-11 62.4

Find 54 sgRNAs with CRISPR-Local

Find 473 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTCTTCTTCTTTAGTAAT+TGG 0.202533 1_4:-58003098 None:intergenic
GTTTCTTTGTTCTTATATTA+TGG 0.204338 1_4:-58006218 None:intergenic
AAAGAATATGTGAGAAATTA+TGG 0.216509 1_4:+57996368 Msa0172790:CDS
ATCTCATTTCCTCTTCTTGC+AGG 0.265231 1_4:-58006186 None:intergenic
ATAATGAGATAAAGAACTTC+TGG 0.302026 1_4:+58005136 Msa0172790:intron
GTCAATATGGAGAAGGCAAC+TGG 0.317251 1_4:+58002982 Msa0172790:CDS
TTGAACCATTAGAGACCATT+TGG 0.355616 1_4:-58003153 None:intergenic
TCCGTGGCTTTGGTCCTAAA+AGG 0.369266 1_4:-58005555 None:intergenic
AGAGTATACGTAAGTCAATA+TGG 0.375867 1_4:+58002969 Msa0172790:CDS
AAGATCTGATTCCGTGGCTT+TGG 0.389101 1_4:-58005565 None:intergenic
AGACCATTTGGGTCCGATCT+TGG 0.399025 1_4:-58003141 None:intergenic
TTAAAAGTTGTCGTTTAAGA+TGG 0.437337 1_4:+58003042 Msa0172790:CDS
ACAAGGAAACGCACAAAACT+TGG 0.439340 1_4:+58005168 Msa0172790:CDS
TGAACCATTAGAGACCATTT+GGG 0.447530 1_4:-58003152 None:intergenic
CGGACCCAAATGGTCTCTAA+TGG 0.449767 1_4:+58003148 Msa0172790:CDS
AATGGAGAAACTTGTCTGAT+TGG 0.452375 1_4:+58006270 Msa0172790:CDS
GTGCTATAAAATTGTTGAAG+AGG 0.454116 1_4:+58005614 Msa0172790:CDS
TGTGAGACATCAGCTTGCTC+CGG 0.459162 1_4:-58005255 None:intergenic
CGTACGGTGCTGATACTACT+AGG 0.461056 1_4:+57996303 Msa0172790:CDS
ACTTCCACTTCGATCACCTA+TGG 0.464348 1_4:+58006476 Msa0172790:CDS
TCAGATCTTCCACAATTTCA+AGG 0.465760 1_4:+58005579 Msa0172790:CDS
ACTCAGACTACTTTCTCCAT+TGG 0.498643 1_4:-58005220 None:intergenic
CTTGCTTTAATGATCTCCAT+AGG 0.506843 1_4:-58006492 None:intergenic
GTGAGACATCAGCTTGCTCC+GGG 0.507053 1_4:-58005254 None:intergenic
ATGCCAAGATCGGACCCAAA+TGG 0.529660 1_4:+58003138 Msa0172790:CDS
AATCATGAATTGAATGCCAA+TGG 0.537217 1_4:+58005204 Msa0172790:CDS
TGTTAGTTGCCTGCAAGAAG+AGG 0.541435 1_4:+58006177 Msa0172790:intron
GGTGATCGAAGTGGAAGTAA+AGG 0.543153 1_4:-58006471 None:intergenic
TCATCTTCCTCAAGTGACCA+TGG 0.543429 1_4:-58002939 None:intergenic
TCAGACAAATCCGACATACA+TGG 0.547147 1_4:+58006327 Msa0172790:CDS
GAAGTTCACTCCATGTATGT+CGG 0.550634 1_4:-58006337 None:intergenic
TATGTGAGAAATTATGGAGA+GGG 0.551893 1_4:+57996374 Msa0172790:CDS
TAGTTATTCATCATGTCGTA+CGG 0.558806 1_4:+57996287 None:intergenic
GAGTTGCACCCTTGAAATTG+TGG 0.560638 1_4:-58005588 None:intergenic
TTGAGACATCAGCTTGATGT+TGG 0.561942 1_4:-58006302 None:intergenic
GTGCAAGAGCTGATGACGAA+TGG 0.570076 1_4:+58006241 Msa0172790:CDS
GTTGAACTTCATGCCAAGAT+CGG 0.571441 1_4:+58003128 Msa0172790:CDS
TACGTAAGTCAATATGGAGA+AGG 0.579347 1_4:+58002975 Msa0172790:CDS
ACTTACGTGATTGTTAATGT+TGG 0.581736 1_4:-58005441 None:intergenic
CAGATCTTCCACAATTTCAA+GGG 0.584405 1_4:+58005580 Msa0172790:CDS
TTCAATTCATGATTGTAGAG+TGG 0.589972 1_4:-58005195 None:intergenic
ATGGTCTCTAATGGTTCAAG+AGG 0.592027 1_4:+58003157 Msa0172790:CDS
AAAAGGACCATGGTCACTTG+AGG 0.594806 1_4:+58002932 Msa0172790:intron
TCTGAGTACTTTGAGCAACC+CGG 0.601606 1_4:+58005236 Msa0172790:CDS
CATTGCATGTCTCAATTACA+CGG 0.603342 1_4:+58005355 Msa0172790:CDS
TCAATATGGAGAAGGCAACT+GGG 0.626854 1_4:+58002983 Msa0172790:CDS
TTGTGGAAGATCTGATTCCG+TGG 0.637087 1_4:-58005571 None:intergenic
AGGACCATGGTCATTACATG+AGG 0.640554 1_4:+57996334 Msa0172790:CDS
GCATCCTCATGTAATGACCA+TGG 0.663000 1_4:-57996338 None:intergenic
ACTTCTGGAATATAAGAACA+AGG 0.663405 1_4:+58005151 Msa0172790:CDS
ATATGTGAGAAATTATGGAG+AGG 0.669714 1_4:+57996373 Msa0172790:CDS
ATCTCCATAGGTGATCGAAG+TGG 0.675143 1_4:-58006480 None:intergenic
AAATATGCTATGCAACAATG+TGG 0.683001 1_4:+58005389 Msa0172790:CDS
GATGACGAATGGAATGACAA+TGG 0.694058 1_4:+58006252 Msa0172790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATTATT+TGG + chr1_4:57997641-57997660 Msa0172790:intron 0.0%
!! TATATATATATATATTATTT+GGG + chr1_4:57997642-57997661 Msa0172790:intron 0.0%
!! TTATATATATATAAATATAT+CGG + chr1_4:57999889-57999908 Msa0172790:intron 0.0%
!! ATATATATATATATATATAT+AGG + chr1_4:57997615-57997634 Msa0172790:intron 0.0%
!! TATATATATATATATATATA+GGG + chr1_4:57997616-57997635 Msa0172790:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr1_4:57997615-57997634 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr1_4:57997616-57997635 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr1_4:57997616-57997635 Msa0172790:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr1_4:57997615-57997634 Msa0172790:intron 0.0%
!!! TGACATAAATATTTTTTTTA+TGG + chr1_4:57996990-57997009 Msa0172790:intron 10.0%
!! ATATATTTACTAATTAATTG+GGG - chr1_4:57997790-57997809 None:intergenic 10.0%
!! GAATATATTTACTAATTAAT+TGG - chr1_4:57997792-57997811 None:intergenic 10.0%
!!! GTAAATATATTCTATTATTT+TGG + chr1_4:57997800-57997819 Msa0172790:intron 10.0%
!!! AATCTTGTTAAATATATTTT+GGG - chr1_4:57997850-57997869 None:intergenic 10.0%
!!! AAATCTTGTTAAATATATTT+TGG - chr1_4:57997851-57997870 None:intergenic 10.0%
!!! AAATTTAGAGTAATAAATTA+CGG - chr1_4:57998635-57998654 None:intergenic 10.0%
!! AATTCAAAATGTAATAATAT+TGG - chr1_4:57999846-57999865 None:intergenic 10.0%
!! TATATATAAAAATCACATTT+AGG - chr1_4:57999878-57999897 None:intergenic 10.0%
!!! CTTATATTTTATTATTATTG+AGG - chr1_4:58000346-58000365 None:intergenic 10.0%
!! ACTATATTTATAAAATTCTT+TGG + chr1_4:58000553-58000572 Msa0172790:intron 10.0%
!!! AAAATTTAAAATTACATGTA+TGG - chr1_4:58001948-58001967 None:intergenic 10.0%
!!! TTTATTTCATTCAAAATTTT+TGG - chr1_4:58006390-58006409 None:intergenic 10.0%
!!! AAAATTTTGAATGAAATAAA+TGG + chr1_4:58006390-58006409 Msa0172790:CDS 10.0%
!! TGATGTCATAATATAAATTA+TGG + chr1_4:57996507-57996526 Msa0172790:intron 15.0%
!! CATATTATCAATAATAAAGA+AGG - chr1_4:57996816-57996835 None:intergenic 15.0%
!!! TAATGAAAAATTAGGTTTTA+TGG - chr1_4:57997400-57997419 None:intergenic 15.0%
!!! TAATTTTTCATTATGTGAAT+GGG + chr1_4:57997407-57997426 Msa0172790:intron 15.0%
!!! GACATAAAAATAATAGATTT+TGG - chr1_4:57997529-57997548 None:intergenic 15.0%
!! TAATTTAAATCCCAAATTAA+GGG - chr1_4:57997887-57997906 None:intergenic 15.0%
!! ATAATTTAAATCCCAAATTA+AGG - chr1_4:57997888-57997907 None:intergenic 15.0%
!!! TTTACGATTTTAAATATTCT+TGG + chr1_4:57998326-57998345 Msa0172790:intron 15.0%
!! TTTGAAAACAAAATATTATG+AGG - chr1_4:57998499-57998518 None:intergenic 15.0%
!!! AATTTAGAGTAATAAATTAC+GGG - chr1_4:57998634-57998653 None:intergenic 15.0%
!!! TGTTTTTTCTAATTTATAGT+GGG + chr1_4:57999235-57999254 Msa0172790:intron 15.0%
!!! TAATAACAAAAGTTGTTATT+TGG - chr1_4:57999331-57999350 None:intergenic 15.0%
!! TAAATAGATTAGCATTATAT+TGG + chr1_4:57999574-57999593 Msa0172790:intron 15.0%
!!! TTGTTATTCTTTAATACTTA+TGG + chr1_4:58000294-58000313 Msa0172790:intron 15.0%
!! ATATTCTGCATTTATAATTA+AGG - chr1_4:58000640-58000659 None:intergenic 15.0%
!!! CACATTTTTTTTATAAAACT+TGG + chr1_4:58001509-58001528 Msa0172790:intron 15.0%
!! TGATGTCATAATATAAATTA+TGG + chr1_4:57996507-57996526 Msa0172790:intron 15.0%
!! CATATTATCAATAATAAAGA+AGG - chr1_4:57996816-57996835 None:intergenic 15.0%
!! ATAAAAACAAATATATCCTA+TGG + chr1_4:58002638-58002657 Msa0172790:intron 15.0%
!!! AAAAAGTTTTTCTTTTTGTA+CGG - chr1_4:58002819-58002838 None:intergenic 15.0%
!! CTAAATCCTAATTTAAAAAA+GGG + chr1_4:58003074-58003093 Msa0172790:CDS 15.0%
!!! TTAATTTTTTTTATTCACGA+TGG + chr1_4:58004019-58004038 Msa0172790:intron 15.0%
!! TAGTAGAACAAAAAATTTAA+TGG - chr1_4:58004321-58004340 None:intergenic 15.0%
!! TGTTTATAATAGAAAAACAT+GGG - chr1_4:58004760-58004779 None:intergenic 15.0%
!! TTGTTTATAATAGAAAAACA+TGG - chr1_4:58004761-58004780 None:intergenic 15.0%
!! TGTTTATAATAGAAAAACAT+GGG - chr1_4:58004760-58004779 None:intergenic 15.0%
!! TTGTTTATAATAGAAAAACA+TGG - chr1_4:58004761-58004780 None:intergenic 15.0%
!! AACAAATACATAATAAGTAT+AGG - chr1_4:58005087-58005106 None:intergenic 15.0%
!! TAACATATATTAATTCTTTG+AGG - chr1_4:58006030-58006049 None:intergenic 15.0%
!! AAAGAATATGTGAGAAATTA+TGG + chr1_4:57996368-57996387 Msa0172790:CDS 20.0%
!! ACACTAAAAATTTCATCAAT+TGG + chr1_4:57996867-57996886 Msa0172790:intron 20.0%
!! GAAATTTCAATGAAATTGTA+GGG - chr1_4:57997098-57997117 None:intergenic 20.0%
!! AGAAATTTCAATGAAATTGT+AGG - chr1_4:57997099-57997118 None:intergenic 20.0%
!! CATTCACATAATGAAAAATT+AGG - chr1_4:57997408-57997427 None:intergenic 20.0%
!!! CTAATTTTTCATTATGTGAA+TGG + chr1_4:57997406-57997425 Msa0172790:intron 20.0%
!! TGATATTCAAAATTGATACA+TGG + chr1_4:57997431-57997450 Msa0172790:intron 20.0%
!!! ATAATAGATTTTGGAATATC+TGG - chr1_4:57997520-57997539 None:intergenic 20.0%
!! TAAAATATCATATTCTCCTA+TGG + chr1_4:57997680-57997699 Msa0172790:intron 20.0%
!! AAAGATTTCTTACTCTTATT+TGG + chr1_4:57997703-57997722 Msa0172790:intron 20.0%
!!! TATTGTATTTTTTTGATGCA+TGG + chr1_4:57998115-57998134 Msa0172790:intron 20.0%
!! TACTATTGTGAATTTATAGA+AGG + chr1_4:57998260-57998279 Msa0172790:intron 20.0%
!! TCAAAACAACTTATTAAGAA+TGG + chr1_4:57998827-57998846 Msa0172790:intron 20.0%
!! TATATAAGAATTCAGATCTA+AGG - chr1_4:57998878-57998897 None:intergenic 20.0%
!! GAAAAAACACAAATACAAAA+TGG - chr1_4:57999224-57999243 None:intergenic 20.0%
!!! GTGTTTTTTCTAATTTATAG+TGG + chr1_4:57999234-57999253 Msa0172790:intron 20.0%
!! TACTTAAATTTACTCAACTT+CGG - chr1_4:57999446-57999465 None:intergenic 20.0%
!!! AATTTTGTAAGACATAAGAA+TGG + chr1_4:57999708-57999727 Msa0172790:intron 20.0%
!! ACTTATATTAATCTCATTCA+AGG - chr1_4:57999775-57999794 None:intergenic 20.0%
!!! TATCATATTTTGTCATATAG+AGG + chr1_4:58000528-58000547 Msa0172790:intron 20.0%
!!! TTGGAATTTTAATTGTGAAA+AGG + chr1_4:58000572-58000591 Msa0172790:intron 20.0%
!! AATTATAAATGCAGAATATG+TGG + chr1_4:58000641-58000660 Msa0172790:intron 20.0%
!! ATAATGTAATATTCAACAGT+GGG - chr1_4:58000865-58000884 None:intergenic 20.0%
!! AATAATGTAATATTCAACAG+TGG - chr1_4:58000866-58000885 None:intergenic 20.0%
!!! TACTCTTGTTTATATATATG+TGG + chr1_4:58000926-58000945 Msa0172790:intron 20.0%
!!! ACTCTTGTTTATATATATGT+GGG + chr1_4:58000927-58000946 Msa0172790:intron 20.0%
!! GTAGTTTAAAGAAAAATATG+TGG - chr1_4:58001423-58001442 None:intergenic 20.0%
!!! AATTTCCTATTTTGCTTTTA+TGG + chr1_4:58001475-58001494 Msa0172790:intron 20.0%
!! AAAATCCATAAAAGCAAAAT+AGG - chr1_4:58001483-58001502 None:intergenic 20.0%
!! AAGAGTAGTAATTACTTATA+GGG - chr1_4:58001603-58001622 None:intergenic 20.0%
!! TAAGAGTAGTAATTACTTAT+AGG - chr1_4:58001604-58001623 None:intergenic 20.0%
!! AATACTCATATATAAGTATG+TGG - chr1_4:58001684-58001703 None:intergenic 20.0%
!!! TGATTAAGTCTATGTTATTT+TGG + chr1_4:58001720-58001739 Msa0172790:intron 20.0%
!!! GATTAAGTCTATGTTATTTT+GGG + chr1_4:58001721-58001740 Msa0172790:intron 20.0%
!!! TATAGCATTTTTAAAATGCT+TGG + chr1_4:58001759-58001778 Msa0172790:intron 20.0%
!!! ATAGCATTTTTAAAATGCTT+GGG + chr1_4:58001760-58001779 Msa0172790:intron 20.0%
!!! CTAAATTGTTACTTTGTTTT+AGG - chr1_4:58002728-58002747 None:intergenic 20.0%
!! CTAAAACAAAGTAACAATTT+AGG + chr1_4:58002726-58002745 Msa0172790:intron 20.0%
!!! TTATTTTCAAAGCAAGAAAA+AGG + chr1_4:58002882-58002901 Msa0172790:intron 20.0%
!!! CCTTTTTTAAATTAGGATTT+AGG - chr1_4:58003076-58003095 None:intergenic 20.0%
!! CCTAAATCCTAATTTAAAAA+AGG + chr1_4:58003073-58003092 Msa0172790:CDS 20.0%
!! GAATCATAATAGCATAATAA+AGG - chr1_4:58003455-58003474 None:intergenic 20.0%
!!! AAAACTGATGGATAAATATA+TGG - chr1_4:58004058-58004077 None:intergenic 20.0%
!! TAACAATTTCATACTCAAAT+TGG - chr1_4:58004122-58004141 None:intergenic 20.0%
!! AAAGTTTAATAGAGACAAAA+TGG + chr1_4:58004824-58004843 Msa0172790:intron 20.0%
!!! TGTTTTGATAAATAACTAGT+AGG - chr1_4:58004892-58004911 None:intergenic 20.0%
!! AATGCTTAAAATCATTTACA+TGG - chr1_4:58005900-58005919 None:intergenic 20.0%
!! TCAAAAGTTTGATATCTAAT+AGG - chr1_4:58006074-58006093 None:intergenic 20.0%
!! GTTTCTTTGTTCTTATATTA+TGG - chr1_4:58006221-58006240 None:intergenic 20.0%
!!! AACTTCAAAAAAGACATTTT+TGG + chr1_4:58006354-58006373 Msa0172790:CDS 20.0%
! ATATGATGAATTTGAGTGAT+TGG + chr1_4:57996552-57996571 Msa0172790:intron 25.0%
! TATGATGAATTTGAGTGATT+GGG + chr1_4:57996553-57996572 Msa0172790:intron 25.0%
! ATGACGTTTAAATAGCTAAA+CGG - chr1_4:57996650-57996669 None:intergenic 25.0%
! AGAATAATTAACCGTCTAAT+GGG - chr1_4:57996673-57996692 None:intergenic 25.0%
! AACTTGTATCTATTGATCTA+TGG + chr1_4:57996840-57996859 Msa0172790:intron 25.0%
!!! TATGGCTATTTTGTTATCAA+AGG + chr1_4:57996913-57996932 Msa0172790:intron 25.0%
!!! ATGGCTATTTTGTTATCAAA+GGG + chr1_4:57996914-57996933 Msa0172790:intron 25.0%
! GAAAGAAATAGGATAATGAT+CGG - chr1_4:57997362-57997381 None:intergenic 25.0%
!! TCCTATTTCTTTCAACAATT+CGG + chr1_4:57997369-57997388 Msa0172790:intron 25.0%
!!! ATATCGATTTGATCGATATT+AGG - chr1_4:57997470-57997489 None:intergenic 25.0%
!! GATCAACTTGACATAAATTT+TGG + chr1_4:57997572-57997591 Msa0172790:intron 25.0%
! TTTATTCAGTACCCTTAATT+TGG + chr1_4:57997873-57997892 Msa0172790:intron 25.0%
! TTATTCAGTACCCTTAATTT+GGG + chr1_4:57997874-57997893 Msa0172790:intron 25.0%
! AATGATCTATTAGTAGACTT+TGG - chr1_4:57998410-57998429 None:intergenic 25.0%
!! CTACTAATAGATCATTCTTT+TGG + chr1_4:57998414-57998433 Msa0172790:intron 25.0%
!!! TTGTCACAAATTGTTTTGAA+GGG + chr1_4:57998472-57998491 Msa0172790:intron 25.0%
! TCTTGTCGCAATTAAATATT+TGG + chr1_4:57998677-57998696 Msa0172790:intron 25.0%
! AAACAACTTATTAAGAATGG+AGG + chr1_4:57998830-57998849 Msa0172790:intron 25.0%
!!! TTATTCTAAGAGTTCTTTTC+TGG + chr1_4:57999272-57999291 Msa0172790:intron 25.0%
!! GACATCAGTATAAACATTTT+AGG - chr1_4:57999657-57999676 None:intergenic 25.0%
!! TTAACATAATCATCCTTTTG+TGG + chr1_4:58000128-58000147 Msa0172790:intron 25.0%
!! TAACATAATCATCCTTTTGT+GGG + chr1_4:58000129-58000148 Msa0172790:intron 25.0%
! TGAAATAGAGACTTATATTG+AGG + chr1_4:58000256-58000275 Msa0172790:intron 25.0%
! CACAAATTTGAGAAACAATT+AGG - chr1_4:58000394-58000413 None:intergenic 25.0%
! TGCCATAAAATATGTATTTG+AGG + chr1_4:58000695-58000714 Msa0172790:intron 25.0%
! GCCATAAAATATGTATTTGA+GGG + chr1_4:58000696-58000715 Msa0172790:intron 25.0%
! CCATAAAATATGTATTTGAG+GGG + chr1_4:58000697-58000716 Msa0172790:intron 25.0%
! TATTTATGACCTCAAAAATG+TGG - chr1_4:58001279-58001298 None:intergenic 25.0%
!!! TTTTGTTATTGACATTCTAG+TGG + chr1_4:58001387-58001406 Msa0172790:intron 25.0%
!! GAAAAATATGTGGATTAATG+TGG - chr1_4:58001413-58001432 None:intergenic 25.0%
! TGTCTATGTTAATCCAATTT+GGG + chr1_4:58001444-58001463 Msa0172790:intron 25.0%
! AAATTCAATAATCCCCAAAT+TGG - chr1_4:58001460-58001479 None:intergenic 25.0%
! TAAAAGTCATATATCCACAT+AGG - chr1_4:58001629-58001648 None:intergenic 25.0%
!! ATGTGGATATATGACTTTTA+TGG + chr1_4:58001629-58001648 Msa0172790:intron 25.0%
! TTATGGAATTGAAAACTCAT+TGG + chr1_4:58001646-58001665 Msa0172790:intron 25.0%
! ATATATAAGTATGTGGTTAG+TGG - chr1_4:58001677-58001696 None:intergenic 25.0%
! ATATGATGAATTTGAGTGAT+TGG + chr1_4:57996552-57996571 Msa0172790:intron 25.0%
! TATGATGAATTTGAGTGATT+GGG + chr1_4:57996553-57996572 Msa0172790:intron 25.0%
! ATGACGTTTAAATAGCTAAA+CGG - chr1_4:57996650-57996669 None:intergenic 25.0%
! AGAATAATTAACCGTCTAAT+GGG - chr1_4:57996673-57996692 None:intergenic 25.0%
! AACTTGTATCTATTGATCTA+TGG + chr1_4:57996840-57996859 Msa0172790:intron 25.0%
!! ATTGGAACCTTTTCTAAATT+AGG - chr1_4:58002517-58002536 None:intergenic 25.0%
! AACAAATATATCCTATGGTT+AGG + chr1_4:58002643-58002662 Msa0172790:intron 25.0%
! TGAACTTGATTTATATAGTG+AGG - chr1_4:58002783-58002802 None:intergenic 25.0%
! GATGCTAATACATTGAAAAA+AGG + chr1_4:58002915-58002934 Msa0172790:intron 25.0%
! TTTAACACATCGAAAAAGTT+CGG - chr1_4:58003027-58003046 None:intergenic 25.0%
!! TTAAAAGTTGTCGTTTAAGA+TGG + chr1_4:58003042-58003061 Msa0172790:CDS 25.0%
!!! ATTGGACCCTTTTTTAAATT+AGG - chr1_4:58003083-58003102 None:intergenic 25.0%
! AGTTCTTCTTCTTTAGTAAT+TGG - chr1_4:58003101-58003120 None:intergenic 25.0%
! GCATAATAAAGGTAAATGAT+AGG - chr1_4:58003444-58003463 None:intergenic 25.0%
!! AACTAATGTATTTTCATGTG+AGG + chr1_4:58003538-58003557 Msa0172790:intron 25.0%
! TCATGTGAGGTTTATTTAAT+TGG + chr1_4:58003551-58003570 Msa0172790:intron 25.0%
! AGCACATATTGAAATAGATT+TGG - chr1_4:58003590-58003609 None:intergenic 25.0%
! TAGTCAACAATTCTCATTTA+AGG + chr1_4:58003669-58003688 Msa0172790:intron 25.0%
! TACATGCATGTAAACTATAT+TGG - chr1_4:58003732-58003751 None:intergenic 25.0%
! ACACACATTCAAAAAATAGA+AGG + chr1_4:58003845-58003864 Msa0172790:intron 25.0%
!!! GCTTTTAAAAAGAAAAGTGT+GGG - chr1_4:58003912-58003931 None:intergenic 25.0%
! ATAAAACTCAATCACTTTAG+TGG - chr1_4:58003934-58003953 None:intergenic 25.0%
!! ACTAAAGTGATTGAGTTTTA+TGG + chr1_4:58003933-58003952 Msa0172790:intron 25.0%
! AAGATTATTCATTAACTGCA+GGG - chr1_4:58003983-58004002 None:intergenic 25.0%
! GATGTAATTAAGAAAACTGA+TGG - chr1_4:58004070-58004089 None:intergenic 25.0%
!! GTTAAAAGAAGATGAAGTTT+TGG - chr1_4:58004092-58004111 None:intergenic 25.0%
!! TAAAATTTTCCATTGCCATA+CGG - chr1_4:58004152-58004171 None:intergenic 25.0%
! CAATGACGATAAAAAGAAAA+TGG + chr1_4:58004358-58004377 Msa0172790:intron 25.0%
!! ACTAAAATGATTGGGTTTTA+TGG - chr1_4:58004487-58004506 None:intergenic 25.0%
!! ATAAAACCCAATCATTTTAG+TGG + chr1_4:58004486-58004505 Msa0172790:intron 25.0%
! TAAAAGCCACTAAAATGATT+GGG - chr1_4:58004495-58004514 None:intergenic 25.0%
! TTAAAAGCCACTAAAATGAT+TGG - chr1_4:58004496-58004515 None:intergenic 25.0%
!! CAATGTACACATTTTGTATT+TGG - chr1_4:58003878-58003897 None:intergenic 25.0%
! ACACACATTCAAAAAATAGA+AGG - chr1_4:58003845-58003864 None:intergenic 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG - chr1_4:58004737-58004756 None:intergenic 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG + chr1_4:58004847-58004866 Msa0172790:intron 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG + chr1_4:58004847-58004866 Msa0172790:intron 25.0%
! TACATAATAAGTATAGGAGA+CGG - chr1_4:58005081-58005100 None:intergenic 25.0%
! ATAATGAGATAAAGAACTTC+TGG + chr1_4:58005136-58005155 Msa0172790:intron 25.0%
! CATAGCATATTTGAAAAATG+AGG - chr1_4:58005381-58005400 None:intergenic 25.0%
! AGTTTCATTTGTCAAATTTC+AGG + chr1_4:58005523-58005542 Msa0172790:intron 25.0%
! GTTTCATTTGTCAAATTTCA+GGG + chr1_4:58005524-58005543 Msa0172790:intron 25.0%
!! TTCAACAATTTTATAGCACT+TGG - chr1_4:58005613-58005632 None:intergenic 25.0%
! TCCTCAAAATAAAATAAACG+TGG + chr1_4:58005799-58005818 Msa0172790:intron 25.0%
!!! TCCACGTTTATTTTATTTTG+AGG - chr1_4:58005803-58005822 None:intergenic 25.0%
!!! TTCAAAAAAGACATTTTTGG+CGG + chr1_4:58006357-58006376 Msa0172790:CDS 25.0%
! GATACTACTAGGTTGAAAAA+AGG + chr1_4:57996314-57996333 Msa0172790:CDS 30.0%
ATATGTGAGAAATTATGGAG+AGG + chr1_4:57996373-57996392 Msa0172790:CDS 30.0%
TATGTGAGAAATTATGGAGA+GGG + chr1_4:57996374-57996393 Msa0172790:CDS 30.0%
AAATTATGGAGAGGGTAATT+GGG + chr1_4:57996382-57996401 Msa0172790:intron 30.0%
TTTACCACATCGAAAAAGTT+CGG - chr1_4:57996426-57996445 None:intergenic 30.0%
! ATTGGGCTTTTGTTACTAAA+TGG + chr1_4:57996570-57996589 Msa0172790:intron 30.0%
CAGAATAATTAACCGTCTAA+TGG - chr1_4:57996674-57996693 None:intergenic 30.0%
! CGGTTAATTATTCTGAAGAT+TGG + chr1_4:57996679-57996698 Msa0172790:intron 30.0%
CCTTTGAATTAGATTGATGA+AGG - chr1_4:57996777-57996796 None:intergenic 30.0%
CCTTCATCAATCTAATTCAA+AGG + chr1_4:57996774-57996793 Msa0172790:intron 30.0%
TAGCCATAACTGTATCTAAT+TGG - chr1_4:57996901-57996920 None:intergenic 30.0%
GTTCGTTGAAAATCAAAACA+AGG - chr1_4:57997076-57997095 None:intergenic 30.0%
!! GTGTATCGATCTACAATTTT+GGG - chr1_4:57997165-57997184 None:intergenic 30.0%
!! AGTGTATCGATCTACAATTT+TGG - chr1_4:57997166-57997185 None:intergenic 30.0%
ATCCCAACAAATAGGAAAAA+CGG - chr1_4:57997221-57997240 None:intergenic 30.0%
TGAATCCTACAAATCAACAA+AGG - chr1_4:57997249-57997268 None:intergenic 30.0%
TCCGAATTGTTGAAAGAAAT+AGG - chr1_4:57997373-57997392 None:intergenic 30.0%
TTTGATCGATATTAGGAGAA+GGG - chr1_4:57997463-57997482 None:intergenic 30.0%
ATTTGATCGATATTAGGAGA+AGG - chr1_4:57997464-57997483 None:intergenic 30.0%
AGAGTAAGAAATCTTTCCAT+AGG - chr1_4:57997699-57997718 None:intergenic 30.0%
!!! GTTGTCACAAATTGTTTTGA+AGG + chr1_4:57998471-57998490 Msa0172790:intron 30.0%
GTTAAGTCATCAAAATTCAG+TGG + chr1_4:57999000-57999019 Msa0172790:intron 30.0%
AATAAGCAATAAGTCACAAG+AGG - chr1_4:57999086-57999105 None:intergenic 30.0%
! TTCTGTTTTCACTTCTATGT+AGG - chr1_4:57999165-57999184 None:intergenic 30.0%
TTAATAACAACACACCGATA+GGG - chr1_4:57999611-57999630 None:intergenic 30.0%
ATTAATAACAACACACCGAT+AGG - chr1_4:57999612-57999631 None:intergenic 30.0%
! AAGATTAGTTCTCTATCAAG+TGG + chr1_4:58000046-58000065 Msa0172790:intron 30.0%
! AGATTAGTTCTCTATCAAGT+GGG + chr1_4:58000047-58000066 Msa0172790:intron 30.0%
TAAGTAATGTCATACCGATA+GGG - chr1_4:58000111-58000130 None:intergenic 30.0%
TTAAGTAATGTCATACCGAT+AGG - chr1_4:58000112-58000131 None:intergenic 30.0%
TAAACTATCTTACCCACAAA+AGG - chr1_4:58000144-58000163 None:intergenic 30.0%
! TGAGATGAGTCTCTAAAAAT+AGG - chr1_4:58000480-58000499 None:intergenic 30.0%
! CCCCTCAAATACATATTTTA+TGG - chr1_4:58000700-58000719 None:intergenic 30.0%
AGCAGAATTATTAACACAAG+TGG - chr1_4:58000744-58000763 None:intergenic 30.0%
ATGCTTATGTGCAAAATATG+TGG + chr1_4:58000764-58000783 Msa0172790:intron 30.0%
TTGAGTTCATGAAACTCTAT+TGG + chr1_4:58000787-58000806 Msa0172790:intron 30.0%
TTATATATATGTGGGATCAG+TGG + chr1_4:58000935-58000954 Msa0172790:intron 30.0%
TATATATATGTGGGATCAGT+GGG + chr1_4:58000936-58000955 Msa0172790:intron 30.0%
CTTGTGCACACTATAAAATA+TGG + chr1_4:58001080-58001099 Msa0172790:intron 30.0%
ATCTCAATGAGCATCATAAT+TGG + chr1_4:58001171-58001190 Msa0172790:intron 30.0%
! GATGCTTAAGTCAATTTTGT+TGG + chr1_4:58001193-58001212 Msa0172790:intron 30.0%
GAATATGCACAATAACTTCT+TGG + chr1_4:58001215-58001234 Msa0172790:intron 30.0%
AACACAATATCATACTCGAT+AGG - chr1_4:58001329-58001348 None:intergenic 30.0%
AGTATGATATTGTGTTCTTG+TGG + chr1_4:58001333-58001352 Msa0172790:intron 30.0%
GTGTCTATGTTAATCCAATT+TGG + chr1_4:58001443-58001462 Msa0172790:intron 30.0%
GTCTATGTTAATCCAATTTG+GGG + chr1_4:58001445-58001464 Msa0172790:intron 30.0%
TTACTACTCTTATACCTATG+TGG + chr1_4:58001612-58001631 Msa0172790:intron 30.0%
!!! TCTATGTTATTTTGGGTTAG+TGG + chr1_4:58001728-58001747 Msa0172790:intron 30.0%
!!! CTATGTTATTTTGGGTTAGT+GGG + chr1_4:58001729-58001748 Msa0172790:intron 30.0%
!!! GTATGATTTGTTTTCCCTAT+CGG + chr1_4:58001867-58001886 Msa0172790:intron 30.0%
! ATTGGGCTTTTGTTACTAAA+TGG + chr1_4:57996570-57996589 Msa0172790:intron 30.0%
CAGAATAATTAACCGTCTAA+TGG - chr1_4:57996674-57996693 None:intergenic 30.0%
! CGGTTAATTATTCTGAAGAT+TGG + chr1_4:57996679-57996698 Msa0172790:intron 30.0%
CCTTTGAATTAGATTGATGA+AGG - chr1_4:57996777-57996796 None:intergenic 30.0%
CCTTCATCAATCTAATTCAA+AGG + chr1_4:57996774-57996793 Msa0172790:intron 30.0%
TGTTCTTCTTCTCTAGTAAT+TGG - chr1_4:58002535-58002554 None:intergenic 30.0%
! TTTTTATCAATCCTGACCAT+AGG - chr1_4:58002625-58002644 None:intergenic 30.0%
AATAAGCAATTCCTAACCAT+AGG - chr1_4:58002657-58002676 None:intergenic 30.0%
ATGGTTAGGAATTGCTTATT+TGG + chr1_4:58002657-58002676 Msa0172790:intron 30.0%
! CCAAAAAGATTAATTTGACG+AGG - chr1_4:58002687-58002706 None:intergenic 30.0%
! CCTCGTCAAATTAATCTTTT+TGG + chr1_4:58002684-58002703 Msa0172790:intron 30.0%
TGATTTATATAGTGAGGCAA+AGG - chr1_4:58002777-58002796 None:intergenic 30.0%
! TTTTCTTTTTGTACGGAAAG+TGG - chr1_4:58002812-58002831 None:intergenic 30.0%
ATACATTGAAAAAAGGACCA+TGG + chr1_4:58002922-58002941 Msa0172790:intron 30.0%
AGAGTATACGTAAGTCAATA+TGG + chr1_4:58002969-58002988 Msa0172790:CDS 30.0%
TAATTAAGTACGTACGGAAT+AGG - chr1_4:58003329-58003348 None:intergenic 30.0%
ATTCCGTACGTACTTAATTA+TGG + chr1_4:58003329-58003348 Msa0172790:intron 30.0%
GAACCATAATTAAGTACGTA+CGG - chr1_4:58003335-58003354 None:intergenic 30.0%
GTACTTAATTATGGTTCAAG+AGG + chr1_4:58003338-58003357 Msa0172790:intron 30.0%
TAATCCAAAATAACAGTGTG+TGG - chr1_4:58003640-58003659 None:intergenic 30.0%
!! AAAAGAAAAGTGTGGGTTTT+TGG - chr1_4:58003905-58003924 None:intergenic 30.0%
!! GGCTTTTAAAAAGAAAAGTG+TGG - chr1_4:58003913-58003932 None:intergenic 30.0%
GAAGATTATTCATTAACTGC+AGG - chr1_4:58003984-58004003 None:intergenic 30.0%
!!! TTTTTTTTATTCACGATGGC+TGG + chr1_4:58004023-58004042 Msa0172790:intron 30.0%
AATTGTTAACTTTGACCGTA+TGG + chr1_4:58004134-58004153 Msa0172790:intron 30.0%
ATTCCAGTTGAAGAAGAAAA+TGG + chr1_4:58004198-58004217 Msa0172790:intron 30.0%
TTCCAGTTGAAGAAGAAAAT+GGG + chr1_4:58004199-58004218 Msa0172790:intron 30.0%
TTGAATTTGATGTTGCCTTA+CGG + chr1_4:58004240-58004259 Msa0172790:intron 30.0%
TTAATCTAGTTACTACCGTA+AGG - chr1_4:58004258-58004277 None:intergenic 30.0%
! TTTTATCGTCATTGCTCAAA+TGG - chr1_4:58004352-58004371 None:intergenic 30.0%
!! GCTTTTAAGAAGAAAAGTGT+GGG + chr1_4:58004508-58004527 Msa0172790:intron 30.0%
! ATAGAAAAACATGGGTGTTT+TGG - chr1_4:58004752-58004771 None:intergenic 30.0%
ACATAATAAGTATAGGAGAC+GGG - chr1_4:58005080-58005099 None:intergenic 30.0%
!! ACTTCTGGAATATAAGAACA+AGG + chr1_4:58005151-58005170 Msa0172790:CDS 30.0%
TTCAATTCATGATTGTAGAG+TGG - chr1_4:58005198-58005217 None:intergenic 30.0%
AATCATGAATTGAATGCCAA+TGG + chr1_4:58005204-58005223 Msa0172790:CDS 30.0%
TCAAACTCATTTGAATCTGA+AGG - chr1_4:58005321-58005340 None:intergenic 30.0%
AAATATGCTATGCAACAATG+TGG + chr1_4:58005389-58005408 Msa0172790:CDS 30.0%
ACTTACGTGATTGTTAATGT+TGG - chr1_4:58005444-58005463 None:intergenic 30.0%
GTGCTATAAAATTGTTGAAG+AGG + chr1_4:58005614-58005633 Msa0172790:CDS 30.0%
! ATATTTGTCTGTCGTTGATT+TGG + chr1_4:58005674-58005693 Msa0172790:intron 30.0%
! AATATGTGACTTTTGATGCA+TGG - chr1_4:58005712-58005731 None:intergenic 30.0%
TTATAAACGTTATGCAAGTC+CGG + chr1_4:58005730-58005749 Msa0172790:intron 30.0%
! CCTTATAGTTCTATTCTACT+GGG + chr1_4:58005753-58005772 Msa0172790:intron 30.0%
! AGAGTTACAAGTCAGTTTTA+TGG + chr1_4:58005958-58005977 Msa0172790:intron 30.0%
!! GAGTTACAAGTCAGTTTTAT+GGG + chr1_4:58005959-58005978 Msa0172790:intron 30.0%
!! AGTTACAAGTCAGTTTTATG+GGG + chr1_4:58005960-58005979 Msa0172790:intron 30.0%
GAAATTATGGAGAGGGTAAT+TGG + chr1_4:57996381-57996400 Msa0172790:intron 35.0%
!!! AAAACCGAACTTTTTCGATG+TGG + chr1_4:57996419-57996438 Msa0172790:intron 35.0%
! TTTCGATGTGGTAAAAGTGT+TGG + chr1_4:57996431-57996450 Msa0172790:intron 35.0%
TCTCATTGGGCTTATCTAAA+TGG - chr1_4:57996612-57996631 None:intergenic 35.0%
ATTTAGATAAGCCCAATGAG+AGG + chr1_4:57996611-57996630 Msa0172790:intron 35.0%
TTAAATAGCTAAACGGCTGA+GGG - chr1_4:57996643-57996662 None:intergenic 35.0%
TTTAAATAGCTAAACGGCTG+AGG - chr1_4:57996644-57996663 None:intergenic 35.0%
TTAAACGTCATCCCATTAGA+CGG + chr1_4:57996659-57996678 Msa0172790:intron 35.0%
GAGCCAATTAGATACAGTTA+TGG + chr1_4:57996895-57996914 Msa0172790:intron 35.0%
CGATCGATTAATGGTTAACA+AGG - chr1_4:57997135-57997154 None:intergenic 35.0%
!! ATCGATCTACAATTTTGGGT+AGG - chr1_4:57997161-57997180 None:intergenic 35.0%
!! TTCCCGTTTTTCCTATTTGT+TGG + chr1_4:57997215-57997234 Msa0172790:intron 35.0%
!! TCCCGTTTTTCCTATTTGTT+GGG + chr1_4:57997216-57997235 Msa0172790:intron 35.0%
TCCCAACAAATAGGAAAAAC+GGG - chr1_4:57997220-57997239 None:intergenic 35.0%
!! CAGAACCTTTGTTGATTTGT+AGG + chr1_4:57997241-57997260 Msa0172790:intron 35.0%
ATCTCACTCTCTCAAATTTG+AGG + chr1_4:57997737-57997756 Msa0172790:intron 35.0%
!! ATTCAGTGGCTCTAAGTATA+AGG + chr1_4:57999014-57999033 Msa0172790:intron 35.0%
AATTGTAATCTCACCTATCG+TGG + chr1_4:57999530-57999549 Msa0172790:intron 35.0%
ATTGTAATCTCACCTATCGT+GGG + chr1_4:57999531-57999550 Msa0172790:intron 35.0%
CTATGTATTGTGTAACGTGA+TGG + chr1_4:58000080-58000099 Msa0172790:intron 35.0%
AACAATTAGGTTACAAGCAG+CGG - chr1_4:58000381-58000400 None:intergenic 35.0%
GGCAGATATCATCAAGAATT+GGG - chr1_4:58000679-58000698 None:intergenic 35.0%
TGGCAGATATCATCAAGAAT+TGG - chr1_4:58000680-58000699 None:intergenic 35.0%
TTAACACAAGTGGTAACTCA+AGG - chr1_4:58000734-58000753 None:intergenic 35.0%
TGCAAGATCATCAACATAAG+TGG - chr1_4:58000827-58000846 None:intergenic 35.0%
! ATAGTGTGCACAAGAGTATA+TGG - chr1_4:58001074-58001093 None:intergenic 35.0%
! ACCAACATTCCACATTTTTG+AGG + chr1_4:58001267-58001286 Msa0172790:intron 35.0%
ACCTCAAAAATGTGGAATGT+TGG - chr1_4:58001271-58001290 None:intergenic 35.0%
TGCAGAAATTGAATCCGATA+GGG - chr1_4:58001884-58001903 None:intergenic 35.0%
! ATTGAGTATTGTCATCCAAG+TGG + chr1_4:58002013-58002032 Msa0172790:intron 35.0%
! TTGAGTATTGTCATCCAAGT+GGG + chr1_4:58002014-58002033 Msa0172790:intron 35.0%
TCTCATTGGGCTTATCTAAA+TGG - chr1_4:57996612-57996631 None:intergenic 35.0%
ATTTAGATAAGCCCAATGAG+AGG + chr1_4:57996611-57996630 Msa0172790:intron 35.0%
TTAAATAGCTAAACGGCTGA+GGG - chr1_4:57996643-57996662 None:intergenic 35.0%
TTTAAATAGCTAAACGGCTG+AGG - chr1_4:57996644-57996663 None:intergenic 35.0%
TTAAACGTCATCCCATTAGA+CGG + chr1_4:57996659-57996678 Msa0172790:intron 35.0%
CAAAAAGTTGTCGTCTAAGA+TGG + chr1_4:58002476-58002495 Msa0172790:intron 35.0%
! CCTTTTCTAAATTAGGATGC+AGG - chr1_4:58002510-58002529 None:intergenic 35.0%
CCTGCATCCTAATTTAGAAA+AGG + chr1_4:58002507-58002526 Msa0172790:intron 35.0%
CTTAACCATAGAGACCATTT+GGG - chr1_4:58002589-58002608 None:intergenic 35.0%
AAGCAAGAAAAAGGTAACGA+TGG + chr1_4:58002891-58002910 Msa0172790:intron 35.0%
TACGTAAGTCAATATGGAGA+AGG + chr1_4:58002975-58002994 Msa0172790:CDS 35.0%
TGAACCATTAGAGACCATTT+GGG - chr1_4:58003155-58003174 None:intergenic 35.0%
TTGAACCATTAGAGACCATT+TGG - chr1_4:58003156-58003175 None:intergenic 35.0%
TCAGTTGCCTATCATTTATG+CGG + chr1_4:58003257-58003276 Msa0172790:intron 35.0%
GTCAAAACCGCATAAATGAT+AGG - chr1_4:58003267-58003286 None:intergenic 35.0%
! TTCTCATTTAAGGTGAACGA+CGG + chr1_4:58003679-58003698 Msa0172790:intron 35.0%
TCCAGTTGAAGAAGAAAATG+GGG + chr1_4:58004200-58004219 Msa0172790:intron 35.0%
AAGTTTGATGTTCCTTGCAA+TGG + chr1_4:58004277-58004296 Msa0172790:intron 35.0%
GAGATGACTCATTAATTGCA+TGG + chr1_4:58004438-58004457 Msa0172790:intron 35.0%
!! GGCTTTTAAGAAGAAAAGTG+TGG + chr1_4:58004507-58004526 Msa0172790:intron 35.0%
!! AGAAGAAAAGTGTGGGTTTT+TGG + chr1_4:58004515-58004534 Msa0172790:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr1_4:58005037-58005056 None:intergenic 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG + chr1_4:58005037-58005056 Msa0172790:intron 35.0%
TTTCATTTGTGTTAGTTGCC+TGG + chr1_4:58005105-58005124 Msa0172790:intron 35.0%
ATCTCATTATCTGTTCTTCC+AGG - chr1_4:58005126-58005145 None:intergenic 35.0%
CATTGCATGTCTCAATTACA+CGG + chr1_4:58005355-58005374 Msa0172790:CDS 35.0%
CATTTGTCAAATTTCAGGGA+TGG + chr1_4:58005528-58005547 Msa0172790:intron 35.0%
TCAGATCTTCCACAATTTCA+AGG + chr1_4:58005579-58005598 Msa0172790:CDS 35.0%
CAGATCTTCCACAATTTCAA+GGG + chr1_4:58005580-58005599 Msa0172790:CDS 35.0%
GTAGAATAGAACTATAAGGC+CGG - chr1_4:58005752-58005771 None:intergenic 35.0%
! GCCTTATAGTTCTATTCTAC+TGG + chr1_4:58005752-58005771 Msa0172790:intron 35.0%
CCCAGTAGAATAGAACTATA+AGG - chr1_4:58005756-58005775 None:intergenic 35.0%
!! CAGTTTTATGGGGTTGTTTT+AGG + chr1_4:58005970-58005989 Msa0172790:intron 35.0%
CTTAAGCACAATTGTGTACA+TGG - chr1_4:58006097-58006116 None:intergenic 35.0%
AATGGAGAAACTTGTCTGAT+TGG + chr1_4:58006270-58006289 Msa0172790:CDS 35.0%
CTTGCTTTAATGATCTCCAT+AGG - chr1_4:58006495-58006514 None:intergenic 35.0%
! CTAGGTTGAAAAAAGGACCA+TGG + chr1_4:57996321-57996340 Msa0172790:CDS 40.0%
TGTTACTAAATGGACCGTGA+TGG + chr1_4:57996580-57996599 Msa0172790:intron 40.0%
GTTACTAAATGGACCGTGAT+GGG + chr1_4:57996581-57996600 Msa0172790:intron 40.0%
TGAGAAAACCTAGAGCTAGA+CGG + chr1_4:57996702-57996721 Msa0172790:intron 40.0%
GTAGATCGATACACTGTACA+TGG + chr1_4:57997171-57997190 Msa0172790:intron 40.0%
! AGGTTCTGATCCCAACAAAT+AGG - chr1_4:57997229-57997248 None:intergenic 40.0%
TGCATAATTGTACCCACGAT+AGG - chr1_4:57999546-57999565 None:intergenic 40.0%
TGGTAACAGTCATACCCTAT+CGG + chr1_4:57999594-57999613 Msa0172790:intron 40.0%
! TCCCTTTGTTATGTGAGTGA+CGG + chr1_4:57999922-57999941 Msa0172790:intron 40.0%
TCCGTCACTCACATAACAAA+GGG - chr1_4:57999926-57999945 None:intergenic 40.0%
TAAGTAACGTCACACCGATA+GGG - chr1_4:57999953-57999972 None:intergenic 40.0%
TTAAGTAACGTCACACCGAT+AGG - chr1_4:57999954-57999973 None:intergenic 40.0%
CTGCAGAAATTGAATCCGAT+AGG - chr1_4:58001885-58001904 None:intergenic 40.0%
TAATCCAACAATCTCCCACT+TGG - chr1_4:58002031-58002050 None:intergenic 40.0%
TGTTACTAAATGGACCGTGA+TGG + chr1_4:57996580-57996599 Msa0172790:intron 40.0%
GTTACTAAATGGACCGTGAT+GGG + chr1_4:57996581-57996600 Msa0172790:intron 40.0%
TGAGAAAACCTAGAGCTAGA+CGG + chr1_4:57996702-57996721 Msa0172790:intron 40.0%
GTTGAATTGCATGCCAAGAT+CGG + chr1_4:58002562-58002581 Msa0172790:intron 40.0%
CCTTAACCATAGAGACCATT+TGG - chr1_4:58002590-58002609 None:intergenic 40.0%
CCAAATGGTCTCTATGGTTA+AGG + chr1_4:58002587-58002606 Msa0172790:intron 40.0%
AATGGTCTCTATGGTTAAGG+AGG + chr1_4:58002590-58002609 Msa0172790:intron 40.0%
AAGGAGGACTGTATATCCTA+TGG + chr1_4:58002606-58002625 Msa0172790:intron 40.0%
TCAATATGGAGAAGGCAACT+GGG + chr1_4:58002983-58003002 Msa0172790:CDS 40.0%
GTTGAACTTCATGCCAAGAT+CGG + chr1_4:58003128-58003147 Msa0172790:CDS 40.0%
ATGGTCTCTAATGGTTCAAG+AGG + chr1_4:58003157-58003176 Msa0172790:CDS 40.0%
TAACTTTGACCGTATGGCAA+TGG + chr1_4:58004140-58004159 Msa0172790:intron 40.0%
! TCCCCATTTTCTTCTTCAAC+TGG - chr1_4:58004204-58004223 None:intergenic 40.0%
TTGATGTTCCTTGCAATGGT+AGG + chr1_4:58004281-58004300 Msa0172790:intron 40.0%
TGATGTTCCTTGCAATGGTA+GGG + chr1_4:58004282-58004301 Msa0172790:intron 40.0%
TCTAATTCCCTACCATTGCA+AGG - chr1_4:58004292-58004311 None:intergenic 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr1_4:58005041-58005060 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr1_4:58005040-58005059 None:intergenic 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG + chr1_4:58005040-58005059 Msa0172790:intron 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG + chr1_4:58005041-58005060 Msa0172790:intron 40.0%
ACAAGGAAACGCACAAAACT+TGG + chr1_4:58005168-58005187 Msa0172790:CDS 40.0%
ACTCAGACTACTTTCTCCAT+TGG - chr1_4:58005223-58005242 None:intergenic 40.0%
AAGTATACATGTGACACGAG+TGG - chr1_4:58006136-58006155 None:intergenic 40.0%
ATCTCATTTCCTCTTCTTGC+AGG - chr1_4:58006189-58006208 None:intergenic 40.0%
GATGACGAATGGAATGACAA+TGG + chr1_4:58006252-58006271 Msa0172790:CDS 40.0%
TTGAGACATCAGCTTGATGT+TGG - chr1_4:58006305-58006324 None:intergenic 40.0%
TCAGACAAATCCGACATACA+TGG + chr1_4:58006327-58006346 Msa0172790:CDS 40.0%
GAAGTTCACTCCATGTATGT+CGG - chr1_4:58006340-58006359 None:intergenic 40.0%
AGGACCATGGTCATTACATG+AGG + chr1_4:57996334-57996353 Msa0172790:CDS 45.0%
GCATCCTCATGTAATGACCA+TGG - chr1_4:57996341-57996360 None:intergenic 45.0%
CTAAATGGTCCAACCCATCA+CGG - chr1_4:57996597-57996616 None:intergenic 45.0%
GTTACCCCTCTCATAGTTGT+CGG + chr1_4:57996735-57996754 Msa0172790:intron 45.0%
ATAGTTGTCGGCGTTGTCTA+CGG + chr1_4:57996747-57996766 Msa0172790:intron 45.0%
GGTAGGCTACGATCGATTAA+TGG - chr1_4:57997144-57997163 None:intergenic 45.0%
GTCCGTCACTCACATAACAA+AGG - chr1_4:57999927-57999946 None:intergenic 45.0%
!! ACGTGATGGACATACCCTAT+CGG + chr1_4:58000094-58000113 Msa0172790:intron 45.0%
TCATCCAAGTGGGAGATTGT+TGG + chr1_4:58002024-58002043 Msa0172790:intron 45.0%
CTAAATGGTCCAACCCATCA+CGG - chr1_4:57996597-57996616 None:intergenic 45.0%
GTTACCCCTCTCATAGTTGT+CGG + chr1_4:57996735-57996754 Msa0172790:intron 45.0%
ATAGTTGTCGGCGTTGTCTA+CGG + chr1_4:57996747-57996766 Msa0172790:intron 45.0%
GGACTGTATATCCTATGGTC+AGG + chr1_4:58002611-58002630 Msa0172790:intron 45.0%
AAAAGGACCATGGTCACTTG+AGG + chr1_4:58002932-58002951 Msa0172790:intron 45.0%
TCATCTTCCTCAAGTGACCA+TGG - chr1_4:58002942-58002961 None:intergenic 45.0%
GTCAATATGGAGAAGGCAAC+TGG + chr1_4:58002982-58003001 Msa0172790:CDS 45.0%
CCAAAATAACAGTGTGTGGC+TGG - chr1_4:58003636-58003655 None:intergenic 45.0%
!! CCAGCCACACACTGTTATTT+TGG + chr1_4:58003633-58003652 Msa0172790:intron 45.0%
CGTCATTGCTCAAATGGTAC+AGG - chr1_4:58004346-58004365 None:intergenic 45.0%
CAACCTTCTAGTCTCTCTCA+TGG - chr1_4:58004404-58004423 None:intergenic 45.0%
CATGAGAGAGACTAGAAGGT+TGG + chr1_4:58004402-58004421 Msa0172790:intron 45.0%
GAGACTAGAAGGTTGGAACT+TGG + chr1_4:58004409-58004428 Msa0172790:intron 45.0%
GCACCCACCTAAAAACACTA+AGG + chr1_4:58004692-58004711 Msa0172790:intron 45.0%
GCACCCACCTAAAAACACTA+AGG - chr1_4:58004692-58004711 None:intergenic 45.0%
TCTGAGTACTTTGAGCAACC+CGG + chr1_4:58005236-58005255 Msa0172790:CDS 45.0%
! TCAGGGATGGAACTCCTTTT+AGG + chr1_4:58005541-58005560 Msa0172790:intron 45.0%
!!! TCCTTTTAGGACCAAAGCCA+CGG + chr1_4:58005554-58005573 Msa0172790:CDS 45.0%
AAGATCTGATTCCGTGGCTT+TGG - chr1_4:58005568-58005587 None:intergenic 45.0%
TTGTGGAAGATCTGATTCCG+TGG - chr1_4:58005574-58005593 None:intergenic 45.0%
GAGTTGCACCCTTGAAATTG+TGG - chr1_4:58005591-58005610 None:intergenic 45.0%
TGTTAGTTGCCTGCAAGAAG+AGG + chr1_4:58006177-58006196 Msa0172790:intron 45.0%
GGTGATCGAAGTGGAAGTAA+AGG - chr1_4:58006474-58006493 None:intergenic 45.0%
ACTTCCACTTCGATCACCTA+TGG + chr1_4:58006476-58006495 Msa0172790:CDS 45.0%
ATCTCCATAGGTGATCGAAG+TGG - chr1_4:58006483-58006502 None:intergenic 45.0%
!! ATTATTTAATTAATCAATTA+TGG + chr1_4:57996458-57996477 Msa0172790:intron 5.0%
!! ATATATATATATATTATTTG+GGG + chr1_4:57997643-57997662 Msa0172790:intron 5.0%
!! AATATATTTACTAATTAATT+GGG - chr1_4:57997791-57997810 None:intergenic 5.0%
!!! TAAATATATTCTATTATTTT+GGG + chr1_4:57997801-57997820 Msa0172790:intron 5.0%
!! AAATATAAATTAATTATACT+TGG - chr1_4:57998308-57998327 None:intergenic 5.0%
!! ATTATTTAATTAATCAATTA+TGG + chr1_4:57996458-57996477 Msa0172790:intron 5.0%
!! ATTTAAATATTATAATAAAG+TGG - chr1_4:58002754-58002773 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG + chr1_4:58003811-58003830 Msa0172790:intron 5.0%
!! TATATATATATATATATATG+GGG - chr1_4:58004659-58004678 None:intergenic 5.0%
!! TATATATATATATATATATG+GGG + chr1_4:58004659-58004678 Msa0172790:intron 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG - chr1_4:58004812-58004831 None:intergenic 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG - chr1_4:58004812-58004831 None:intergenic 5.0%
!! CGTACGGTGCTGATACTACT+AGG + chr1_4:57996303-57996322 Msa0172790:CDS 50.0%
TGGAGAGGGTAATTGGGATG+CGG + chr1_4:57996388-57996407 Msa0172790:intron 50.0%
!! CTAAATGGACCGTGATGGGT+TGG + chr1_4:57996585-57996604 Msa0172790:intron 50.0%
ACCTAGAGCTAGACGGAATG+AGG + chr1_4:57996709-57996728 Msa0172790:intron 50.0%
CCTAGAGCTAGACGGAATGA+GGG + chr1_4:57996710-57996729 Msa0172790:intron 50.0%
AACGCCGACAACTATGAGAG+GGG - chr1_4:57996742-57996761 None:intergenic 50.0%
CAACGCCGACAACTATGAGA+GGG - chr1_4:57996743-57996762 None:intergenic 50.0%
ACAACGCCGACAACTATGAG+AGG - chr1_4:57996744-57996763 None:intergenic 50.0%
GATGAATGTCACACTCTGCG+AGG + chr1_4:57999036-57999055 Msa0172790:intron 50.0%
!! GAGTGACGGACATACCCTAT+CGG + chr1_4:57999936-57999955 Msa0172790:intron 50.0%
!! CTAAATGGACCGTGATGGGT+TGG + chr1_4:57996585-57996604 Msa0172790:intron 50.0%
ACCTAGAGCTAGACGGAATG+AGG + chr1_4:57996709-57996728 Msa0172790:intron 50.0%
CCTAGAGCTAGACGGAATGA+GGG + chr1_4:57996710-57996729 Msa0172790:intron 50.0%
AACGCCGACAACTATGAGAG+GGG - chr1_4:57996742-57996761 None:intergenic 50.0%
CAACGCCGACAACTATGAGA+GGG - chr1_4:57996743-57996762 None:intergenic 50.0%
ACAACGCCGACAACTATGAG+AGG - chr1_4:57996744-57996763 None:intergenic 50.0%
ATGCCAAGATCGGACCCAAA+TGG + chr1_4:58002572-58002591 Msa0172790:intron 50.0%
AGACCATTTGGGTCCGATCT+TGG - chr1_4:58002578-58002597 None:intergenic 50.0%
TCGGACCCAAATGGTCTCTA+TGG + chr1_4:58002581-58002600 Msa0172790:intron 50.0%
ATGCCAAGATCGGACCCAAA+TGG + chr1_4:58002572-58002591 Msa0172790:intron 50.0%
AGACCATTTGGGTCCGATCT+TGG - chr1_4:58002578-58002597 None:intergenic 50.0%
CGGACCCAAATGGTCTCTAA+TGG + chr1_4:58003148-58003167 Msa0172790:CDS 50.0%
CAGCCATGAGAGAGACTAGA+AGG + chr1_4:58004398-58004417 Msa0172790:intron 50.0%
! TGTGAGACATCAGCTTGCTC+CGG - chr1_4:58005258-58005277 None:intergenic 50.0%
!! TCCGTGGCTTTGGTCCTAAA+AGG - chr1_4:58005558-58005577 None:intergenic 50.0%
! GTGCAAGAGCTGATGACGAA+TGG + chr1_4:58006241-58006260 Msa0172790:CDS 50.0%
TAGCTAAACGGCTGAGGGCA+GGG - chr1_4:57996638-57996657 None:intergenic 55.0%
ATAGCTAAACGGCTGAGGGC+AGG - chr1_4:57996639-57996658 None:intergenic 55.0%
!! CCCTCATTCCGTCTAGCTCT+AGG - chr1_4:57996713-57996732 None:intergenic 55.0%
TAGCTAAACGGCTGAGGGCA+GGG - chr1_4:57996638-57996657 None:intergenic 55.0%
ATAGCTAAACGGCTGAGGGC+AGG - chr1_4:57996639-57996658 None:intergenic 55.0%
!! CCCTCATTCCGTCTAGCTCT+AGG - chr1_4:57996713-57996732 None:intergenic 55.0%
! GTGAGACATCAGCTTGCTCC+GGG - chr1_4:58005257-58005276 None:intergenic 55.0%
GAGGGCAGGGACCTCTCATT+GGG - chr1_4:57996625-57996644 None:intergenic 60.0%
TGAGGGCAGGGACCTCTCAT+TGG - chr1_4:57996626-57996645 None:intergenic 60.0%
GAGGGCAGGGACCTCTCATT+GGG - chr1_4:57996625-57996644 None:intergenic 60.0%
TGAGGGCAGGGACCTCTCAT+TGG - chr1_4:57996626-57996645 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 57996299 58006524 57996299 ID=Msa0172790;Name=Msa0172790
chr1_4 mRNA 57996299 58006524 57996299 ID=Msa0172790-mRNA-1;Parent=Msa0172790;Name=Msa0172790-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.4|0.16|1|0.4|0.33|6|0|356
chr1_4 exon 57996299 57996395 57996299 ID=Msa0172790-mRNA-1:exon:17818;Parent=Msa0172790-mRNA-1
chr1_4 exon 58002937 58003178 58002937 ID=Msa0172790-mRNA-1:exon:17819;Parent=Msa0172790-mRNA-1
chr1_4 exon 58005150 58005315 58005150 ID=Msa0172790-mRNA-1:exon:17820;Parent=Msa0172790-mRNA-1
chr1_4 exon 58005325 58005457 58005325 ID=Msa0172790-mRNA-1:exon:17821;Parent=Msa0172790-mRNA-1
chr1_4 exon 58005545 58005635 58005545 ID=Msa0172790-mRNA-1:exon:17822;Parent=Msa0172790-mRNA-1
chr1_4 exon 58006183 58006524 58006183 ID=Msa0172790-mRNA-1:exon:17823;Parent=Msa0172790-mRNA-1
chr1_4 CDS 57996299 57996395 57996299 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
chr1_4 CDS 58002937 58003178 58002937 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
chr1_4 CDS 58005150 58005315 58005150 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
chr1_4 CDS 58005325 58005457 58005325 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
chr1_4 CDS 58005545 58005635 58005545 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
chr1_4 CDS 58006183 58006524 58006183 ID=Msa0172790-mRNA-1:cds;Parent=Msa0172790-mRNA-1
Gene Sequence

>Msa0172790

ATGTCGTACGGTGCTGATACTACTAGGTTGAAAAAAGGACCATGGTCATTACATGAGGATGCAATATTAAAAGAATATGTGAGAAATTATGGAGAGGGACCATGGTCACTTGAGGAAGATGAAAAATTAAGAGTATACGTAAGTCAATATGGAGAAGGCAACTGGGATGCAGTTAGAAAGAAAACCGAACTTTTTCGATGTGTTAAAAGTTGTCGTTTAAGATGGCTTAATCACCTAAATCCTAATTTAAAAAAGGGTCCAATTACTAAAGAAGAAGAACTTAAAATCGTTGAACTTCATGCCAAGATCGGACCCAAATGGTCTCTAATGGTTCAAGAGAACTTCTGGAATATAAGAACAAGGAAACGCACAAAACTTGGTTTGCCACTCTACAATCATGAATTGAATGCCAATGGAGAAAGTAGTCTGAGTACTTTGAGCAACCCGGAGCAAGCTGATGTCTCACATGAAATGAAATTCAAAAATGATATTTTCAGCAGAAAACATTCAAATGAGTTTGAACAACTTTCAAACTCATTGCATGTCTCAATTACACGGCCTCATTTTTCAAATATGCTATGCAACAATGTGGTCAATACTTCTATAAACAATAATGCTTCACCAACATTAACAATCACGGATGGAACTCCTTTTAGGACCAAAGCCACGGAATCAGATCTTCCACAATTTCAAGGGTGCAACTCCAAGTGCTATAAAATTGTTGAAGAGTTGCCTGCAAGAAGAGGAAATGAGATAGATAATTACCATAATATAAGAACAAAGAAACGTGCAAGAGCTGATGACGAATGGAATGACAATGGAGAAACTTGTCTGATTGGTTTGAGCAACCAACATCAAGCTGATGTCTCAAAATCAGACAAATCCGACATACATGGAGTGAACTTCAAAAAAGACATTTTTGGCGGAAAAGATCCAAAAATTTTGAATGAAATAAATGGAAGCAACTTTGAAGAACTTTCAAACTCATTTTATTCATATTCACTACTTCACAAGTATCCTTTACTTCCACTTCGATCACCTATGGAGATCATTAAAGCAAGACAAAAATGA
Protein sequence

>Msa0172790

MSYGADTTRLKKGPWSLHEDAILKEYVRNYGEGPWSLEEDEKLRVYVSQYGEGNWDAVRKKTELFRCVKSCRLRWLNHLNPNLKKGPITKEEELKIVELHAKIGPKWSLMVQENFWNIRTRKRTKLGLPLYNHELNANGESSLSTLSNPEQADVSHEMKFKNDIFSRKHSNEFEQLSNSLHVSITRPHFSNMLCNNVVNTSINNNASPTLTITDGTPFRTKATESDLPQFQGCNSKCYKIVEELPARRGNEIDNYHNIRTKKRARADDEWNDNGETCLIGLSNQHQADVSKSDKSDIHGVNFKKDIFGGKDPKILNEINGSNFEELSNSFYSYSLLHKYPLLPLRSPMEIIKARQK*