AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174350 MtrunA17_Chr1g0194741 96.594 646 19 2 1 643 7 652 0.0 1274
Msa0174350 MtrunA17_Chr1g0197591 61.978 1102 345 20 4 1090 3 1045 0.0 1228
Msa0174350 MtrunA17_Chr1g0194731 95.415 458 19 2 643 1099 1 457 0.0 834
Msa0174350 MtrunA17_Chr8g0371601 28.772 570 352 17 123 668 196 735 2.46e-43 172
Msa0174350 MtrunA17_Chr8g0371601 31.658 199 111 7 906 1081 957 1153 1.30e-16 85.5
Msa0174350 MtrunA17_Chr5g0405701 28.086 559 330 16 146 668 251 773 5.15e-42 167
Msa0174350 MtrunA17_Chr5g0405701 34.483 145 71 4 960 1081 1040 1183 3.39e-16 84.3
Msa0174350 MtrunA17_Chr8g0343551 73.239 71 19 0 1020 1090 12 82 1.71e-31 118
Msa0174350 MtrunA17_Chr8g0377481 31.111 315 178 10 377 673 381 674 7.80e-31 131
Msa0174350 MtrunA17_Chr8g0377481 32.609 138 69 6 967 1091 838 964 1.43e-13 75.5
Msa0174350 MtrunA17_Chr3g0122391 27.578 446 257 16 266 672 305 723 1.42e-29 127
Msa0174350 MtrunA17_Chr3g0122391 32.716 162 83 8 942 1091 874 1021 3.22e-14 77.8
Msa0174350 MtrunA17_Chr5g0447641 26.301 365 207 12 345 679 576 908 1.00e-23 108
Msa0174350 MtrunA17_Chr5g0447641 33.333 150 62 7 970 1093 1074 1211 1.77e-12 72.0
Msa0174350 MtrunA17_Chr8g0392301 26.075 372 221 9 345 678 340 695 1.10e-22 105
Msa0174350 MtrunA17_Chr8g0392301 32.727 165 86 5 944 1091 835 991 6.61e-15 80.1
Msa0174350 MtrunA17_Chr3g0136601 29.464 336 180 14 361 663 335 646 2.68e-20 97.4
Msa0174350 MtrunA17_Chr4g0013831 27.273 352 192 11 372 702 324 632 2.18e-18 90.9
Msa0174350 MtrunA17_Chr1g0150511 26.027 365 203 12 393 707 381 728 4.32e-18 90.1
Msa0174350 MtrunA17_Chr7g0269631 29.130 230 127 7 448 672 393 591 8.16e-16 82.4
Msa0174350 MtrunA17_Chr8g0364781 36.496 137 61 6 973 1096 15 138 4.95e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174350 AT2G47430.1 37.979 1148 615 25 5 1095 12 1119 0.0 673
Msa0174350 AT2G17820.1 33.858 381 232 9 290 668 400 762 4.80e-44 174
Msa0174350 AT2G17820.1 31.658 199 97 7 921 1090 1004 1192 3.10e-16 84.7
Msa0174350 AT1G27320.1 27.475 404 225 12 374 763 436 785 7.72e-31 132
Msa0174350 AT1G27320.1 29.221 154 75 5 967 1096 887 1030 1.13e-11 69.7
Msa0174350 AT2G01830.2 27.869 366 220 11 332 671 415 762 8.13e-29 125
Msa0174350 AT2G01830.2 37.037 135 67 4 967 1091 942 1068 7.25e-16 83.6
Msa0174350 AT2G01830.1 27.869 366 220 11 332 671 392 739 8.81e-29 125
Msa0174350 AT2G01830.1 37.037 135 67 4 967 1091 919 1045 7.30e-16 83.6
Msa0174350 AT2G01830.4 27.869 366 220 11 332 671 392 739 8.81e-29 125
Msa0174350 AT2G01830.4 37.037 135 67 4 967 1091 919 1045 7.30e-16 83.6
Msa0174350 AT2G01830.6 27.869 366 220 11 332 671 392 739 8.81e-29 125
Msa0174350 AT2G01830.6 37.037 135 67 4 967 1091 919 1045 7.30e-16 83.6
Msa0174350 AT2G01830.3 27.869 366 220 11 332 671 392 739 8.81e-29 125
Msa0174350 AT2G01830.3 37.037 135 67 4 967 1091 919 1045 7.30e-16 83.6
Msa0174350 AT2G01830.5 27.869 366 220 11 332 671 404 751 9.87e-29 125
Msa0174350 AT2G01830.5 37.500 136 65 5 967 1091 931 1057 7.85e-16 83.6
Msa0174350 AT5G35750.1 29.003 331 174 12 374 674 573 872 5.73e-25 113
Msa0174350 AT5G35750.1 31.544 149 68 5 967 1091 1032 1170 9.46e-12 70.1
Msa0174350 AT1G66340.1 27.532 316 178 9 372 680 323 594 4.77e-19 93.6
Msa0174350 AT5G10720.1 30.037 273 154 11 393 663 371 608 4.05e-18 90.9
Msa0174350 AT2G40940.1 25.538 325 185 9 358 670 309 588 1.15e-15 82.4

Find 201 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1_4:+59977405 Msa0174350:CDS
TTGCTACCCCATTGATATTA+TGG 0.146001 1_4:+59973181 Msa0174350:CDS
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1_4:+59974146 Msa0174350:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1_4:-59972760 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1_4:-59972234 None:intergenic
TGTGATCTAGGTTCATTTCT+TGG 0.224149 1_4:-59977073 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1_4:+59972786 Msa0174350:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1_4:+59974193 Msa0174350:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1_4:+59973062 Msa0174350:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1_4:+59973002 Msa0174350:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1_4:+59972971 Msa0174350:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1_4:-59974219 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1_4:-59974933 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1_4:+59972821 Msa0174350:CDS
CACAGGTTGGATATAGTATA+TGG 0.279878 1_4:-59972706 None:intergenic
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1_4:-59974102 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1_4:+59974137 Msa0174350:CDS
ATTAGTAACAACTAATTTAG+AGG 0.290279 1_4:-59974183 None:intergenic
ACAAAAGTCCTATGTTAATC+TGG 0.291733 1_4:+59977153 Msa0174350:CDS
TTCTTTCCACTTAATGGTTT+AGG 0.294905 1_4:-59977232 None:intergenic
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1_4:-59977694 None:intergenic
TTCCTGAGTTCGGTGGTAAT+TGG 0.302430 1_4:+59977032 Msa0174350:CDS
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1_4:+59974223 Msa0174350:CDS
TGCTACCCCATTGATATTAT+GGG 0.314042 1_4:+59973182 Msa0174350:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1_4:+59973891 Msa0174350:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1_4:+59971842 Msa0174350:CDS
ATGATTTACCTAGCAAATCT+TGG 0.341823 1_4:-59974277 None:intergenic
TTGGAAGGTACTTGTGATCT+AGG 0.351381 1_4:-59977085 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1_4:+59974708 Msa0174350:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1_4:-59972233 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1_4:+59973068 Msa0174350:CDS
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1_4:+59977005 Msa0174350:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1_4:-59976905 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1_4:+59976980 Msa0174350:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1_4:+59974872 Msa0174350:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1_4:+59976425 Msa0174350:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1_4:-59977689 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1_4:-59974582 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1_4:+59976359 Msa0174350:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1_4:+59972822 Msa0174350:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1_4:+59974900 Msa0174350:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1_4:+59976900 Msa0174350:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1_4:-59977104 None:intergenic
TTCTATTCCCATAATATCAA+TGG 0.403961 1_4:-59973189 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1_4:+59974999 Msa0174350:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1_4:-59976470 None:intergenic
AACACTCTTGTGGTTAGTCT+TGG 0.410012 1_4:-59974778 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1_4:+59976681 Msa0174350:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1_4:-59976851 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1_4:-59976992 None:intergenic
ATTAGGCTTCTTCCTGAGTT+CGG 0.422475 1_4:+59977022 Msa0174350:CDS
ACATTTCAATCAAACCAATA+AGG 0.422617 1_4:-59974160 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1_4:+59976557 Msa0174350:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1_4:-59972187 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1_4:+59972984 Msa0174350:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1_4:+59977298 Msa0174350:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1_4:+59977414 Msa0174350:CDS
CCATAAGACATGGATCTTGT+TGG 0.432881 1_4:-59974872 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1_4:+59976558 Msa0174350:CDS
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1_4:+59976904 Msa0174350:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1_4:-59974230 None:intergenic
TCTATTCCCATAATATCAAT+GGG 0.437409 1_4:-59973188 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.437547 1_4:+59974596 Msa0174350:CDS
CATAAGACATGGATCTTGTT+GGG 0.439105 1_4:-59974871 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1_4:+59977649 Msa0174350:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1_4:+59976733 Msa0174350:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1_4:+59976740 Msa0174350:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1_4:+59976667 Msa0174350:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1_4:+59973927 Msa0174350:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1_4:-59976345 None:intergenic
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1_4:+59974987 Msa0174350:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1_4:-59976955 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1_4:+59974244 Msa0174350:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1_4:+59973926 Msa0174350:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1_4:+59976827 Msa0174350:CDS
GACACTCTTGATTGTAATGA+TGG 0.452822 1_4:+59973953 Msa0174350:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1_4:+59977163 Msa0174350:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1_4:+59973081 Msa0174350:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1_4:+59972025 Msa0174350:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1_4:-59977553 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1_4:-59974995 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1_4:+59975000 Msa0174350:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1_4:+59974993 Msa0174350:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1_4:+59974981 Msa0174350:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1_4:+59972900 Msa0174350:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1_4:+59977736 Msa0174350:CDS
GTTGTATTGGACTCTTGTAA+TGG 0.481853 1_4:+59974609 Msa0174350:CDS
TGATATTATGGGAATAGAAT+CGG 0.482331 1_4:+59973193 Msa0174350:CDS
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1_4:-59976478 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1_4:+59975016 Msa0174350:CDS
TCCATTAAGATATAATCATA+AGG 0.487002 1_4:-59977406 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1_4:+59972885 Msa0174350:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1_4:+59977226 Msa0174350:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1_4:+59977552 Msa0174350:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1_4:-59977681 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1_4:-59976932 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1_4:-59974276 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1_4:+59974646 Msa0174350:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1_4:-59972555 None:intergenic
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1_4:+59976284 Msa0174350:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1_4:+59972591 Msa0174350:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1_4:+59974972 Msa0174350:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1_4:-59974133 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1_4:-59977015 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1_4:-59977386 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1_4:+59976254 Msa0174350:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1_4:+59977279 Msa0174350:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1_4:-59972723 None:intergenic
CATCCAATGGCAATGAAGAA+AGG 0.508058 1_4:+59974579 Msa0174350:CDS
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1_4:-59972719 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1_4:+59977545 Msa0174350:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1_4:-59976740 None:intergenic
CAAAAGTCCTATGTTAATCT+GGG 0.514695 1_4:+59977154 Msa0174350:CDS
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1_4:+59976293 Msa0174350:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1_4:-59976812 None:intergenic
TGGAGATCTAATAAGGAATG+AGG 0.518743 1_4:+59973088 Msa0174350:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1_4:+59972778 Msa0174350:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1_4:+59976263 Msa0174350:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1_4:+59977544 Msa0174350:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1_4:+59976571 Msa0174350:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1_4:-59976488 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1_4:+59974269 Msa0174350:CDS
GACAATGCGAGTGATATAAT+CGG 0.541959 1_4:-59972943 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1_4:-59974075 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1_4:+59972600 Msa0174350:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1_4:+59976371 Msa0174350:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1_4:+59976517 Msa0174350:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1_4:+59972955 Msa0174350:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1_4:+59974901 Msa0174350:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1_4:+59977196 Msa0174350:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1_4:+59972888 Msa0174350:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1_4:+59974489 Msa0174350:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1_4:+59972667 Msa0174350:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1_4:+59977328 Msa0174350:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1_4:+59977589 Msa0174350:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1_4:+59974639 Msa0174350:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1_4:+59972596 Msa0174350:CDS
AAGATTTCATAACACTCTTG+TGG 0.563575 1_4:-59974788 None:intergenic
AGCAAGATCATGAAAGATGA+AGG 0.564158 1_4:-59971840 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1_4:+59974709 Msa0174350:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1_4:+59972072 Msa0174350:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1_4:+59974992 Msa0174350:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1_4:+59977560 Msa0174350:CDS
GTGTTATGAAATCTTTGTCT+TGG 0.572186 1_4:+59974796 Msa0174350:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1_4:+59972954 Msa0174350:CDS
AGTTGATTTGTATCATCCAA+TGG 0.573037 1_4:+59974566 Msa0174350:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1_4:-59976506 None:intergenic
TCTTGCAAGGATCAAGCTGT+TGG 0.574460 1_4:+59973119 Msa0174350:CDS
CACACACTTTCATCATTGGA+AGG 0.574607 1_4:-59977100 None:intergenic
GGAGATCTAATAAGGAATGA+GGG 0.576644 1_4:+59973089 Msa0174350:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1_4:+59977357 Msa0174350:CDS
ATCCAATTACCACCGAACTC+AGG 0.583478 1_4:-59977034 None:intergenic
GCTGACCACTGAGACTGGAA+TGG 0.584171 1_4:+59977654 Msa0174350:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1_4:+59974485 Msa0174350:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1_4:+59976658 Msa0174350:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1_4:+59972062 Msa0174350:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1_4:+59977126 Msa0174350:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1_4:+59976271 Msa0174350:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1_4:+59977178 Msa0174350:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1_4:-59977336 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1_4:-59977277 None:intergenic
AGGCTTCTTCCTGAGTTCGG+TGG 0.599749 1_4:+59977025 Msa0174350:CDS
GGCACATAACAGTTAGAGCA+TGG 0.600016 1_4:+59974730 Msa0174350:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1_4:+59974539 Msa0174350:CDS
TGAGGGAGCTGTATCTTGCA+AGG 0.603521 1_4:+59973106 Msa0174350:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1_4:-59976487 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1_4:-59976500 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1_4:+59977576 Msa0174350:CDS
GAAGTGGATGATACAGGGAA+AGG 0.611039 1_4:+59974906 Msa0174350:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1_4:+59977122 Msa0174350:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1_4:+59972666 Msa0174350:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1_4:-59976677 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1_4:+59972720 Msa0174350:CDS
AACTACATCCTCAAGGAGAG+AGG 0.617424 1_4:-59974547 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1_4:+59976277 Msa0174350:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1_4:+59977369 Msa0174350:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1_4:+59977561 Msa0174350:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1_4:+59972668 Msa0174350:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1_4:-59972060 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1_4:+59977127 Msa0174350:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1_4:+59972889 Msa0174350:CDS
AGTTAGAGCATGGACTCAGA+AGG 0.635220 1_4:+59974740 Msa0174350:CDS
ACAAATCAACTACATCCTCA+AGG 0.638204 1_4:-59974554 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1_4:-59974882 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1_4:+59977358 Msa0174350:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1_4:+59972669 Msa0174350:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1_4:-59972254 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1_4:+59977336 Msa0174350:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1_4:-59976489 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1_4:+59977111 Msa0174350:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1_4:+59972725 Msa0174350:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1_4:-59972065 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1_4:-59977403 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1_4:+59977540 Msa0174350:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1_4:-59972585 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1_4:-59977659 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1_4:+59972890 Msa0174350:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1_4:+59976477 Msa0174350:CDS
CTTCTCTGATGTTCACACCA+AGG 0.706528 1_4:+59972255 Msa0174350:CDS
CTATTCCCATAATATCAATG+GGG 0.765530 1_4:-59973187 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1_4:-59972076 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTAGTAAAATTATTTTTT+GGG - chr1_4:59973359-59973378 None:intergenic 10.0%
!!! AAAGTAGTAAAATTATTTTT+TGG - chr1_4:59973360-59973379 None:intergenic 10.0%
!!! AAAATATTTATGGTTTTGAA+GGG - chr1_4:59972304-59972323 None:intergenic 15.0%
!! ATAAGCAAACAAAATATTTA+TGG - chr1_4:59972314-59972333 None:intergenic 15.0%
!! TATCATTAAAAATCATCAAA+CGG - chr1_4:59973040-59973059 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG - chr1_4:59973651-59973670 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG - chr1_4:59973652-59973671 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG + chr1_4:59974447-59974466 Msa0174350:intron 15.0%
!!! TGATTTTTTTACAACTAAAA+GGG - chr1_4:59976209-59976228 None:intergenic 15.0%
!!! ATGATTTTTTTACAACTAAA+AGG - chr1_4:59976210-59976229 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG + chr1_4:59976227-59976246 Msa0174350:intron 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG - chr1_4:59976411-59976430 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG + chr1_4:59977491-59977510 Msa0174350:intron 15.0%
!!! TTGATTTGTAACAAAGATTA+AGG + chr1_4:59971934-59971953 Msa0174350:intron 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG + chr1_4:59972018-59972037 Msa0174350:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG - chr1_4:59972305-59972324 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG + chr1_4:59972503-59972522 Msa0174350:intron 20.0%
!! TTAATTTATTTGCACTTTGT+AGG + chr1_4:59972527-59972546 Msa0174350:intron 20.0%
!! TTCAATGCTTGAAATAATAA+CGG - chr1_4:59972558-59972577 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG - chr1_4:59973283-59973302 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG - chr1_4:59973333-59973352 None:intergenic 20.0%
!! TTATGGAATGTGTTTATAAA+CGG - chr1_4:59973536-59973555 None:intergenic 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG - chr1_4:59973738-59973757 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG - chr1_4:59974186-59974205 None:intergenic 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG + chr1_4:59974193-59974212 Msa0174350:CDS 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG - chr1_4:59974252-59974271 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG - chr1_4:59974386-59974405 None:intergenic 20.0%
!! AAATGTTTGATATATAAGAG+AGG - chr1_4:59975301-59975320 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG + chr1_4:59975934-59975953 Msa0174350:intron 20.0%
!! AGTTCATATATGATATAGAA+AGG + chr1_4:59976026-59976045 Msa0174350:intron 20.0%
!! TTAAGATTCAAATCATGAAT+TGG - chr1_4:59976165-59976184 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG - chr1_4:59976412-59976431 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG + chr1_4:59976629-59976648 Msa0174350:CDS 20.0%
!! ATTAAGATATAATCATAAGG+AGG - chr1_4:59977406-59977425 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG + chr1_4:59977405-59977424 Msa0174350:CDS 20.0%
!! TCCATTAAGATATAATCATA+AGG - chr1_4:59977409-59977428 None:intergenic 20.0%
!!! TTTGTTGATGATGATTTCAT+TGG - chr1_4:59972190-59972209 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG - chr1_4:59972285-59972304 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG - chr1_4:59972286-59972305 None:intergenic 25.0%
!! GATAGTGTTGTTAGATATTA+TGG - chr1_4:59972763-59972782 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG - chr1_4:59973000-59973019 None:intergenic 25.0%
! GATGGAAAAGTTATTGTAAA+AGG + chr1_4:59973002-59973021 Msa0174350:CDS 25.0%
! TCTATTCCCATAATATCAAT+GGG - chr1_4:59973191-59973210 None:intergenic 25.0%
! TTCTATTCCCATAATATCAA+TGG - chr1_4:59973192-59973211 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG + chr1_4:59973193-59973212 Msa0174350:CDS 25.0%
!! AAGTACTATTTGGTATTTTC+GGG - chr1_4:59973332-59973351 None:intergenic 25.0%
! TAATCCAAGTCATAAAGAAA+AGG + chr1_4:59973926-59973945 Msa0174350:CDS 25.0%
! AATCCAAGTCATAAAGAAAA+GGG + chr1_4:59973927-59973946 Msa0174350:CDS 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG + chr1_4:59973999-59974018 Msa0174350:CDS 25.0%
! ACATTTCAATCAAACCAATA+AGG - chr1_4:59974163-59974182 None:intergenic 25.0%
! TACAAAATATTGTTAACGAG+CGG + chr1_4:59974401-59974420 Msa0174350:intron 25.0%
! CTGTTAAATTTACTGATGAA+GGG + chr1_4:59974709-59974728 Msa0174350:CDS 25.0%
! AATACAAAATCCATAAGACA+TGG - chr1_4:59974885-59974904 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG + chr1_4:59974890-59974909 Msa0174350:CDS 25.0%
! TTAGTTGTCAATTCATTTAG+AGG + chr1_4:59975097-59975116 Msa0174350:intron 25.0%
! TGTTTCATTAGAATGAATCA+AGG - chr1_4:59975904-59975923 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG - chr1_4:59976206-59976225 None:intergenic 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG + chr1_4:59976238-59976257 Msa0174350:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG - chr1_4:59976406-59976425 None:intergenic 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG + chr1_4:59976628-59976647 Msa0174350:CDS 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG + chr1_4:59976782-59976801 Msa0174350:CDS 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG - chr1_4:59976854-59976873 None:intergenic 25.0%
! AAAAACTTCTTTCCACTTAA+TGG - chr1_4:59977241-59977260 None:intergenic 25.0%
!! ATTAAGTGGAAAGAAGTTTT+TGG + chr1_4:59977240-59977259 Msa0174350:CDS 25.0%
!!! TTATATCTTAATGGATTGTC+AGG + chr1_4:59977414-59977433 Msa0174350:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG + chr1_4:59977523-59977542 Msa0174350:intron 25.0%
GGTGACATTAGTAGAATTAA+GGG - chr1_4:59972236-59972255 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG - chr1_4:59972237-59972256 None:intergenic 30.0%
!!! TATTTTTTTTCTTTTCGCGC+TGG - chr1_4:59972488-59972507 None:intergenic 30.0%
ATTTATTTGCACTTTGTAGG+TGG + chr1_4:59972530-59972549 Msa0174350:intron 30.0%
TTGACACAAATCTCATACAT+AGG + chr1_4:59972591-59972610 Msa0174350:CDS 30.0%
ACAAATCTCATACATAGGAA+TGG + chr1_4:59972596-59972615 Msa0174350:CDS 30.0%
! TTTTTCACACACTACAATGA+TGG + chr1_4:59972627-59972646 Msa0174350:CDS 30.0%
CTATCAATATTGATGCAAGT+TGG + chr1_4:59972778-59972797 Msa0174350:CDS 30.0%
! ATTGATGCAAGTTGGATAAA+TGG + chr1_4:59972786-59972805 Msa0174350:CDS 30.0%
TTCACATGAATTTGCATCAT+TGG + chr1_4:59972821-59972840 Msa0174350:CDS 30.0%
TCACATGAATTTGCATCATT+GGG + chr1_4:59972822-59972841 Msa0174350:CDS 30.0%
TCAAGGGACAAAATCATATT+TGG + chr1_4:59972971-59972990 Msa0174350:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG + chr1_4:59973062-59973081 Msa0174350:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG + chr1_4:59973068-59973087 Msa0174350:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG + chr1_4:59973081-59973100 Msa0174350:CDS 30.0%
CTATTCCCATAATATCAATG+GGG - chr1_4:59973190-59973209 None:intergenic 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG - chr1_4:59973319-59973338 None:intergenic 30.0%
! TTTGGGTACAAAGTACTATT+TGG - chr1_4:59973342-59973361 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG + chr1_4:59973427-59973446 Msa0174350:intron 30.0%
ACGACATTTGTGAACATATT+TGG - chr1_4:59973817-59973836 None:intergenic 30.0%
! AATCCCTTTTCTTTATGACT+TGG - chr1_4:59973933-59973952 None:intergenic 30.0%
TTCTGAACTTGGTTTCAAAT+TGG - chr1_4:59974222-59974241 None:intergenic 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG + chr1_4:59974223-59974242 Msa0174350:CDS 30.0%
TGATTTACCTAGCAAATCTT+GGG - chr1_4:59974279-59974298 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG - chr1_4:59974280-59974299 None:intergenic 30.0%
TTTGCTAGGTAAATCATCAT+AGG + chr1_4:59974283-59974302 Msa0174350:intron 30.0%
TGCTACCAATGTTGTTAAAT+AGG + chr1_4:59974310-59974329 Msa0174350:intron 30.0%
GCTACCAATGTTGTTAAATA+GGG + chr1_4:59974311-59974330 Msa0174350:intron 30.0%
!! AGTTGATTTGTATCATCCAA+TGG + chr1_4:59974566-59974585 Msa0174350:CDS 30.0%
GCTGTTAAATTTACTGATGA+AGG + chr1_4:59974708-59974727 Msa0174350:CDS 30.0%
! AGTCTTGGATTTTTGCAATT+TGG - chr1_4:59974766-59974785 None:intergenic 30.0%
AAGATTTCATAACACTCTTG+TGG - chr1_4:59974791-59974810 None:intergenic 30.0%
GTGTTATGAAATCTTTGTCT+TGG + chr1_4:59974796-59974815 Msa0174350:CDS 30.0%
! TATTTGAAGTGGATGATACA+GGG + chr1_4:59974901-59974920 Msa0174350:CDS 30.0%
CAAGTTAAAGAGAATTCTGT+TGG + chr1_4:59974972-59974991 Msa0174350:CDS 30.0%
GACTCTTATCGTCTATAAAT+AGG - chr1_4:59975326-59975345 None:intergenic 30.0%
! CACACATTTTACCCATTTAT+AGG + chr1_4:59975355-59975374 Msa0174350:intron 30.0%
CTAGTGTTTGTATCAAGTAT+AGG - chr1_4:59975444-59975463 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG - chr1_4:59975580-59975599 None:intergenic 30.0%
CCTATGAATAGGTAAAATGT+TGG - chr1_4:59975782-59975801 None:intergenic 30.0%
! CCAACATTTTACCTATTCAT+AGG + chr1_4:59975779-59975798 Msa0174350:intron 30.0%
AGAGTCATATTGTTTGTGTT+GGG - chr1_4:59975836-59975855 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG - chr1_4:59975837-59975856 None:intergenic 30.0%
AAAGACAAAAGAGAAGTGAT+TGG - chr1_4:59975974-59975993 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG - chr1_4:59976509-59976528 None:intergenic 30.0%
CATTCTTTACATTACTGATG+AGG + chr1_4:59976517-59976536 Msa0174350:CDS 30.0%
ATTATCATTGATGCAAATGC+AGG + chr1_4:59976827-59976846 Msa0174350:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG + chr1_4:59976900-59976919 Msa0174350:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG - chr1_4:59976935-59976954 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG - chr1_4:59976958-59976977 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG + chr1_4:59976980-59976999 Msa0174350:CDS 30.0%
AACAATCTACTACCATGAAA+TGG - chr1_4:59976995-59977014 None:intergenic 30.0%
ACAAAAGTCCTATGTTAATC+TGG + chr1_4:59977153-59977172 Msa0174350:CDS 30.0%
CAAAAGTCCTATGTTAATCT+GGG + chr1_4:59977154-59977173 Msa0174350:CDS 30.0%
! TTTTCTTCCCAGATTAACAT+AGG - chr1_4:59977164-59977183 None:intergenic 30.0%
TATGTTAATCTGGGAAGAAA+AGG + chr1_4:59977163-59977182 Msa0174350:CDS 30.0%
TTCTTTCCACTTAATGGTTT+AGG - chr1_4:59977235-59977254 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG - chr1_4:59977280-59977299 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG + chr1_4:59977279-59977298 Msa0174350:CDS 30.0%
AGTAAATGCTCTTTCTTGAT+AGG - chr1_4:59977697-59977716 None:intergenic 30.0%
AGCAAGATCATGAAAGATGA+AGG - chr1_4:59971843-59971862 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG + chr1_4:59971842-59971861 Msa0174350:CDS 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG - chr1_4:59971911-59971930 None:intergenic 35.0%
! GTTGTGTTATTGTAGGCATA+TGG + chr1_4:59972025-59972044 Msa0174350:intron 35.0%
TACAAGAAATGGGTATACCT+TGG - chr1_4:59972275-59972294 None:intergenic 35.0%
! TTTTTATTACCGAACTGTCG+TGG + chr1_4:59972362-59972381 Msa0174350:intron 35.0%
!!! GCGAAGGAAATTCACTTTTT+TGG + chr1_4:59972410-59972429 Msa0174350:intron 35.0%
AATGTACTCTAGATTTGCGA+AGG + chr1_4:59972447-59972466 Msa0174350:intron 35.0%
TATGAGATTTGTGTCAAGTG+AGG - chr1_4:59972588-59972607 None:intergenic 35.0%
ATCTCATACATAGGAATGGA+AGG + chr1_4:59972600-59972619 Msa0174350:CDS 35.0%
ATGTACTCTAACTCATCTAG+TGG + chr1_4:59972666-59972685 Msa0174350:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG + chr1_4:59972667-59972686 Msa0174350:CDS 35.0%
! CACAGGTTGGATATAGTATA+TGG - chr1_4:59972709-59972728 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG + chr1_4:59972733-59972752 Msa0174350:CDS 35.0%
TCAGCTAGAATCAACAGAAT+AGG + chr1_4:59972885-59972904 Msa0174350:CDS 35.0%
CTAGAATCAACAGAATAGGA+GGG + chr1_4:59972889-59972908 Msa0174350:CDS 35.0%
TAGAATCAACAGAATAGGAG+GGG + chr1_4:59972890-59972909 Msa0174350:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG - chr1_4:59972946-59972965 None:intergenic 35.0%
TCATATTTGGCTACCAAAGA+TGG + chr1_4:59972984-59973003 Msa0174350:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG + chr1_4:59973088-59973107 Msa0174350:CDS 35.0%
GGAGATCTAATAAGGAATGA+GGG + chr1_4:59973089-59973108 Msa0174350:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG + chr1_4:59973181-59973200 Msa0174350:CDS 35.0%
TGCTACCCCATTGATATTAT+GGG + chr1_4:59973182-59973201 Msa0174350:CDS 35.0%
! AGATGAGAGATCCATTTTGT+GGG - chr1_4:59973905-59973924 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG - chr1_4:59973906-59973925 None:intergenic 35.0%
GACACTCTTGATTGTAATGA+TGG + chr1_4:59973953-59973972 Msa0174350:CDS 35.0%
AGCAAAAGCAAGACTCTTAT+TGG - chr1_4:59974105-59974124 None:intergenic 35.0%
GGAGACCAACTTAAAACAAA+TGG + chr1_4:59974244-59974263 Msa0174350:CDS 35.0%
TGTGCCCTATTTAACAACAT+TGG - chr1_4:59974318-59974337 None:intergenic 35.0%
AAAAATGCAACTAGAGGAAG+AGG + chr1_4:59974512-59974531 Msa0174350:CDS 35.0%
ACAAATCAACTACATCCTCA+AGG - chr1_4:59974557-59974576 None:intergenic 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG + chr1_4:59974596-59974615 Msa0174350:CDS 35.0%
GTTGTATTGGACTCTTGTAA+TGG + chr1_4:59974609-59974628 Msa0174350:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG + chr1_4:59974639-59974658 Msa0174350:CDS 35.0%
CATAAGACATGGATCTTGTT+GGG - chr1_4:59974874-59974893 None:intergenic 35.0%
! GTATTTGAAGTGGATGATAC+AGG + chr1_4:59974900-59974919 Msa0174350:CDS 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG - chr1_4:59974936-59974955 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG + chr1_4:59975170-59975189 Msa0174350:intron 35.0%
AAATGGGTAAAATGTGTGAG+TGG - chr1_4:59975353-59975372 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG - chr1_4:59975396-59975415 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG - chr1_4:59975441-59975460 None:intergenic 35.0%
TTGGATTAAGTATAGGAGGT+GGG - chr1_4:59975573-59975592 None:intergenic 35.0%
TTTGGATTAAGTATAGGAGG+TGG - chr1_4:59975574-59975593 None:intergenic 35.0%
GTGTTTGGATTAAGTATAGG+AGG - chr1_4:59975577-59975596 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG - chr1_4:59975735-59975754 None:intergenic 35.0%
! TACCTAATGCCTTAAGGTTT+TGG - chr1_4:59975736-59975755 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG + chr1_4:59975738-59975757 Msa0174350:intron 35.0%
! CCTTAAGGCATTAGGTATAT+GGG + chr1_4:59975739-59975758 Msa0174350:intron 35.0%
AAATGTTGGATACGTAAGAG+AGG - chr1_4:59975768-59975787 None:intergenic 35.0%
GAGACAGTGAATTATGAGTA+TGG + chr1_4:59976359-59976378 Msa0174350:CDS 35.0%
AGTTGTTCATAGAGAGCTTA+GGG + chr1_4:59976558-59976577 Msa0174350:CDS 35.0%
TATCAGTGATCAAAGTTCAC+CGG + chr1_4:59976658-59976677 Msa0174350:CDS 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG + chr1_4:59976733-59976752 Msa0174350:CDS 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG + chr1_4:59976904-59976923 Msa0174350:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG - chr1_4:59976908-59976927 None:intergenic 35.0%
GTAGATTGTTCCAAGTCATT+AGG + chr1_4:59977005-59977024 Msa0174350:CDS 35.0%
TGTGATCTAGGTTCATTTCT+TGG - chr1_4:59977076-59977095 None:intergenic 35.0%
TAGACACACACTTTCATCAT+TGG - chr1_4:59977107-59977126 None:intergenic 35.0%
AGAAAAGGTTCTGTTCATCA+AGG + chr1_4:59977178-59977197 Msa0174350:CDS 35.0%
CAAGGTGAAATAGAAGAAAG+TGG + chr1_4:59977196-59977215 Msa0174350:CDS 35.0%
AGCAATCCTAAACCATTAAG+TGG + chr1_4:59977226-59977245 Msa0174350:CDS 35.0%
ACTATTGACCAATGTGAGAA+TGG + chr1_4:59977328-59977347 Msa0174350:CDS 35.0%
! AGGAGGATTAGTAAAATCCT+TGG - chr1_4:59977389-59977408 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG - chr1_4:59977684-59977703 None:intergenic 35.0%
ATGCTCTTTCTTGATAGGTT+TGG - chr1_4:59977692-59977711 None:intergenic 35.0%
! ATACCAACATGGTGTCAATG+AGG - chr1_4:59972068-59972087 None:intergenic 40.0%
GTACTCTAACTCATCTAGTG+GGG + chr1_4:59972668-59972687 Msa0174350:CDS 40.0%
TACTCTAACTCATCTAGTGG+GGG + chr1_4:59972669-59972688 Msa0174350:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG - chr1_4:59972734-59972753 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG + chr1_4:59972732-59972751 Msa0174350:CDS 40.0%
! TGACACTGGAATGGTTTTTG+GGG + chr1_4:59972734-59972753 Msa0174350:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG + chr1_4:59972888-59972907 Msa0174350:CDS 40.0%
CAAGATAAGCACGAAGATCA+TGG - chr1_4:59974136-59974155 None:intergenic 40.0%
TTGGTCTCCAATTCTGAACT+TGG - chr1_4:59974233-59974252 None:intergenic 40.0%
! AATTGTGCCCAAGATTTGCT+AGG + chr1_4:59974269-59974288 Msa0174350:CDS 40.0%
TTGTTAACGAGCGGCTATAA+TGG + chr1_4:59974410-59974429 Msa0174350:intron 40.0%
ACTTGACACAAGCAAGATTG+AGG + chr1_4:59974485-59974504 Msa0174350:CDS 40.0%
TGATTTATCCTCTCTCCTTG+AGG + chr1_4:59974539-59974558 Msa0174350:CDS 40.0%
CATCCAATGGCAATGAAGAA+AGG + chr1_4:59974579-59974598 Msa0174350:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG - chr1_4:59974585-59974604 None:intergenic 40.0%
ATTCACGTGTGAAAGGTGAT+AGG + chr1_4:59974646-59974665 Msa0174350:CDS 40.0%
!! AACACTCTTGTGGTTAGTCT+TGG - chr1_4:59974781-59974800 None:intergenic 40.0%
CCATAAGACATGGATCTTGT+TGG - chr1_4:59974875-59974894 None:intergenic 40.0%
CCAACAAGATCCATGTCTTA+TGG + chr1_4:59974872-59974891 Msa0174350:CDS 40.0%
GTCTCACGTCACCTATAAAT+GGG - chr1_4:59975369-59975388 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG - chr1_4:59975370-59975389 None:intergenic 40.0%
AAGTATAGGAGGTGAGAACT+CGG - chr1_4:59975430-59975449 None:intergenic 40.0%
AGGGAGAATCTTGGGTTTAT+GGG - chr1_4:59975540-59975559 None:intergenic 40.0%
AACAAGTGGTATTAGTGCCT+TGG - chr1_4:59975634-59975653 None:intergenic 40.0%
! AAGGCACTAATACCACTTGT+TGG + chr1_4:59975633-59975652 Msa0174350:intron 40.0%
AGGCACTAATACCACTTGTT+GGG + chr1_4:59975634-59975653 Msa0174350:intron 40.0%
CTCTTGTGGTTATGGAACAT+TGG - chr1_4:59975692-59975711 None:intergenic 40.0%
GTCTATGTCTCTTGTGGTTA+TGG - chr1_4:59975700-59975719 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG - chr1_4:59975732-59975751 None:intergenic 40.0%
! ACCCAAAACCTTAAGGCATT+AGG + chr1_4:59975731-59975750 Msa0174350:intron 40.0%
CCCATATACCTAATGCCTTA+AGG - chr1_4:59975742-59975761 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG - chr1_4:59975793-59975812 None:intergenic 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG - chr1_4:59975825-59975844 None:intergenic 40.0%
TTCTAGGTACGTTTGATGCA+TGG + chr1_4:59976254-59976273 Msa0174350:intron 40.0%
AGACATTGGTATTGTGGACA+AGG + chr1_4:59976277-59976296 Msa0174350:CDS 40.0%
CACTGTCTCATTCTCACATA+AGG - chr1_4:59976348-59976367 None:intergenic 40.0%
TATGAGTATGGATCAACCTC+AGG + chr1_4:59976371-59976390 Msa0174350:CDS 40.0%
ACAATTCGTACTGCTAGTTC+TGG + chr1_4:59976425-59976444 Msa0174350:CDS 40.0%
CAGTTGTTCATAGAGAGCTT+AGG + chr1_4:59976557-59976576 Msa0174350:CDS 40.0%
GAGCTTAGGGATTAAAGTCA+AGG + chr1_4:59976571-59976590 Msa0174350:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG - chr1_4:59976743-59976762 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG + chr1_4:59976740-59976759 Msa0174350:CDS 40.0%
ATTAGGCTTCTTCCTGAGTT+CGG + chr1_4:59977022-59977041 Msa0174350:CDS 40.0%
!! TTGGAAGGTACTTGTGATCT+AGG - chr1_4:59977088-59977107 None:intergenic 40.0%
CACACACTTTCATCATTGGA+AGG - chr1_4:59977103-59977122 None:intergenic 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG + chr1_4:59977111-59977130 Msa0174350:CDS 40.0%
GTCTAAGTGTGGAACAATGT+TGG + chr1_4:59977122-59977141 Msa0174350:CDS 40.0%
AAGTGTGGAACAATGTTGGA+AGG + chr1_4:59977126-59977145 Msa0174350:CDS 40.0%
AGTGTGGAACAATGTTGGAA+GGG + chr1_4:59977127-59977146 Msa0174350:CDS 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG + chr1_4:59977298-59977317 Msa0174350:CDS 40.0%
TGTTCAAGAGGGTTTAACCA+AGG + chr1_4:59977369-59977388 Msa0174350:CDS 40.0%
AACAAGGGAGATAAGAGAGA+TGG + chr1_4:59977576-59977595 Msa0174350:CDS 40.0%
AGAGAGATGGAGAAACACTA+TGG + chr1_4:59977589-59977608 Msa0174350:CDS 40.0%
! AACATGGTGTCAATGAGGCA+AGG - chr1_4:59972063-59972082 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG + chr1_4:59972062-59972081 Msa0174350:CDS 45.0%
GACACCATGTTGGTATCTCA+TGG + chr1_4:59972072-59972091 Msa0174350:CDS 45.0%
GTGACCATGAGATACCAACA+TGG - chr1_4:59972079-59972098 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG - chr1_4:59972257-59972276 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG + chr1_4:59972255-59972274 Msa0174350:CDS 45.0%
TAAGTAGTTCGAGATCGCGA+AGG + chr1_4:59972394-59972413 Msa0174350:intron 45.0%
ATTCCAGTGTCATGGTTCAC+AGG - chr1_4:59972726-59972745 None:intergenic 45.0%
TGTGAACCATGACACTGGAA+TGG + chr1_4:59972725-59972744 Msa0174350:CDS 45.0%
TCTTGCAAGGATCAAGCTGT+TGG + chr1_4:59973119-59973138 Msa0174350:CDS 45.0%
GTGTTAGCTGTCCCACAAAA+TGG + chr1_4:59973891-59973910 Msa0174350:CDS 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG - chr1_4:59974078-59974097 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG + chr1_4:59974137-59974156 Msa0174350:CDS 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG + chr1_4:59974146-59974165 Msa0174350:CDS 45.0%
GGCAGGAAAAATGCAACTAG+AGG + chr1_4:59974506-59974525 Msa0174350:CDS 45.0%
AACTACATCCTCAAGGAGAG+AGG - chr1_4:59974550-59974569 None:intergenic 45.0%
GGCACATAACAGTTAGAGCA+TGG + chr1_4:59974730-59974749 Msa0174350:CDS 45.0%
AGTTAGAGCATGGACTCAGA+AGG + chr1_4:59974740-59974759 Msa0174350:CDS 45.0%
GAAGTGGATGATACAGGGAA+AGG + chr1_4:59974906-59974925 Msa0174350:CDS 45.0%
GAGAATTCTGTTGGCCAAGT+AGG + chr1_4:59974981-59975000 Msa0174350:CDS 45.0%
ACTTGGGATTGTGCAGTCAT+TGG + chr1_4:59975016-59975035 Msa0174350:CDS 45.0%
ATAATGCTCCTGACTCTCCT+CGG - chr1_4:59975156-59975175 None:intergenic 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG + chr1_4:59975156-59975175 Msa0174350:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG + chr1_4:59975157-59975176 Msa0174350:intron 45.0%
CTCTCTCTCTCTCTCTCTTA+TGG - chr1_4:59975197-59975216 None:intergenic 45.0%
AACAAGTGGTTGCAATGTGC+TGG - chr1_4:59975500-59975519 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG + chr1_4:59975499-59975518 Msa0174350:intron 45.0%
GCACATTGCAACCACTTGTT+GGG + chr1_4:59975500-59975519 Msa0174350:intron 45.0%
GGGAGAATCTTGGGTTTATG+GGG - chr1_4:59975539-59975558 None:intergenic 45.0%
GAGGGAGAATCTTGGGTTTA+TGG - chr1_4:59975541-59975560 None:intergenic 45.0%
CTCACTTGAGGGAGAATCTT+GGG - chr1_4:59975548-59975567 None:intergenic 45.0%
ACTCACTTGAGGGAGAATCT+TGG - chr1_4:59975549-59975568 None:intergenic 45.0%
GGAAGTGGGATTCTAGTGTT+TGG - chr1_4:59975592-59975611 None:intergenic 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG - chr1_4:59975624-59975643 None:intergenic 45.0%
! GGCACTAATACCACTTGTTG+GGG + chr1_4:59975635-59975654 Msa0174350:intron 45.0%
TGGGGAATCTGAGGAAACAT+CGG + chr1_4:59975653-59975672 Msa0174350:intron 45.0%
TGTGGTGTCTATGTCTCTTG+TGG - chr1_4:59975706-59975725 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG - chr1_4:59975724-59975743 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG + chr1_4:59975724-59975743 Msa0174350:intron 45.0%
CGTTTGATGCATGGAGACAT+TGG + chr1_4:59976263-59976282 Msa0174350:CDS 45.0%
GCATGGAGACATTGGTATTG+TGG + chr1_4:59976271-59976290 Msa0174350:CDS 45.0%
GGTATTGTGGACAAGGAAGT+TGG + chr1_4:59976284-59976303 Msa0174350:CDS 45.0%
GACAAGGAAGTTGGCAAAAG+AGG + chr1_4:59976293-59976312 Msa0174350:CDS 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG - chr1_4:59976390-59976409 None:intergenic 45.0%
AGAATGACATGTGAAGGCTC+AGG - chr1_4:59976503-59976522 None:intergenic 45.0%
TCAAAGTTCACCGGAGTCTT+CGG + chr1_4:59976667-59976686 Msa0174350:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG + chr1_4:59976681-59976700 Msa0174350:CDS 45.0%
CAGGAAGAAGCCTAATGACT+TGG - chr1_4:59977018-59977037 None:intergenic 45.0%
! TTCCTGAGTTCGGTGGTAAT+TGG + chr1_4:59977032-59977051 Msa0174350:CDS 45.0%
ATCCAATTACCACCGAACTC+AGG - chr1_4:59977037-59977056 None:intergenic 45.0%
CCTCTTCACCATTCTCACAT+TGG - chr1_4:59977339-59977358 None:intergenic 45.0%
CCAATGTGAGAATGGTGAAG+AGG + chr1_4:59977336-59977355 Msa0174350:CDS 45.0%
GCTGTGAGAACTGTTCAAGA+GGG + chr1_4:59977358-59977377 Msa0174350:CDS 45.0%
GGCATCTGTCCAATTCATTG+TGG - chr1_4:59977535-59977554 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG + chr1_4:59977540-59977559 Msa0174350:intron 45.0%
GAAATCCATTCCAGTCTCAG+TGG - chr1_4:59977662-59977681 None:intergenic 45.0%
!!! TATTTGAATATTTTTTTTTA+TGG - chr1_4:59973553-59973572 None:intergenic 5.0%
!!! AAATATTTTTATTAAATAAC+AGG + chr1_4:59973863-59973882 Msa0174350:intron 5.0%
CCACTTTGACCACGACAGTT+CGG - chr1_4:59972374-59972393 None:intergenic 50.0%
CAGTGTCATGGTTCACAGGT+TGG - chr1_4:59972722-59972741 None:intergenic 50.0%
CAACCTGTGAACCATGACAC+TGG + chr1_4:59972720-59972739 Msa0174350:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG + chr1_4:59972900-59972919 Msa0174350:CDS 50.0%
ACTCGCATTGTCGATCGTCA+AGG + chr1_4:59972954-59972973 Msa0174350:CDS 50.0%
CTCGCATTGTCGATCGTCAA+GGG + chr1_4:59972955-59972974 Msa0174350:CDS 50.0%
TGAGGGAGCTGTATCTTGCA+AGG + chr1_4:59973106-59973125 Msa0174350:CDS 50.0%
GACACAAGCAAGATTGAGGC+AGG + chr1_4:59974489-59974508 Msa0174350:CDS 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG + chr1_4:59974987-59975006 Msa0174350:CDS 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG + chr1_4:59975000-59975019 Msa0174350:CDS 50.0%
ACAATCTGTTAGAGAGCCCG+AGG + chr1_4:59975136-59975155 Msa0174350:intron 50.0%
TAATGCTCCTGACTCTCCTC+GGG - chr1_4:59975155-59975174 None:intergenic 50.0%
CGGTTGAGGGAGAGATTGTT+GGG - chr1_4:59975410-59975429 None:intergenic 50.0%
TCGGTTGAGGGAGAGATTGT+TGG - chr1_4:59975411-59975430 None:intergenic 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG - chr1_4:59975495-59975514 None:intergenic 50.0%
! CATTGCAACCACTTGTTGGG+CGG + chr1_4:59975503-59975522 Msa0174350:intron 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG - chr1_4:59975606-59975625 None:intergenic 50.0%
TCTTCCACCAAGCTGAACCA+AGG + chr1_4:59975614-59975633 Msa0174350:intron 50.0%
! ACCACTTGTTGGGGAATCTG+AGG + chr1_4:59975644-59975663 Msa0174350:intron 50.0%
TCCTCAGATTCCCCAACAAG+TGG - chr1_4:59975648-59975667 None:intergenic 50.0%
GGGGAATCTGAGGAAACATC+GGG + chr1_4:59975654-59975673 Msa0174350:intron 50.0%
GGGAATCTGAGGAAACATCG+GGG + chr1_4:59975655-59975674 Msa0174350:intron 50.0%
GGAATCTGAGGAAACATCGG+GGG + chr1_4:59975656-59975675 Msa0174350:intron 50.0%
! GAGGGGCTAACATGGAGTTT+TGG - chr1_4:59976473-59976492 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG - chr1_4:59976680-59976699 None:intergenic 50.0%
GGCTGTGAGAACTGTTCAAG+AGG + chr1_4:59977357-59977376 Msa0174350:CDS 50.0%
GACAGATGCCAGTGAAGGAT+GGG + chr1_4:59977545-59977564 Msa0174350:intron 50.0%
! AGGATGGGTTTGAGGCAACA+AGG + chr1_4:59977560-59977579 Msa0174350:CDS 50.0%
! GGATGGGTTTGAGGCAACAA+GGG + chr1_4:59977561-59977580 Msa0174350:CDS 50.0%
CCGAACTGTCGTGGTCAAAG+TGG + chr1_4:59972371-59972390 Msa0174350:intron 55.0%
TGGCCAAGTAGGAACTGGCT+TGG + chr1_4:59974992-59975011 Msa0174350:CDS 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG + chr1_4:59974993-59975012 Msa0174350:CDS 55.0%
GTCCCAAGCCAGTTCCTACT+TGG - chr1_4:59974998-59975017 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG + chr1_4:59974999-59975018 Msa0174350:CDS 55.0%
GGAGGTGAGAACTCGGTTGA+GGG - chr1_4:59975423-59975442 None:intergenic 55.0%
AGGAGGTGAGAACTCGGTTG+AGG - chr1_4:59975424-59975443 None:intergenic 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG - chr1_4:59975472-59975491 None:intergenic 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG - chr1_4:59975490-59975509 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG - chr1_4:59975559-59975578 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG - chr1_4:59975560-59975579 None:intergenic 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG - chr1_4:59975607-59975626 None:intergenic 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG - chr1_4:59975613-59975632 None:intergenic 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG - chr1_4:59975621-59975640 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG + chr1_4:59976477-59976496 Msa0174350:CDS 55.0%
AGGCTTCTTCCTGAGTTCGG+TGG + chr1_4:59977025-59977044 Msa0174350:CDS 55.0%
GGACAGATGCCAGTGAAGGA+TGG + chr1_4:59977544-59977563 Msa0174350:intron 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG + chr1_4:59977552-59977571 Msa0174350:CDS 55.0%
GCCTCAAACCCATCCTTCAC+TGG - chr1_4:59977556-59977575 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG + chr1_4:59977649-59977668 Msa0174350:CDS 55.0%
GCTGACCACTGAGACTGGAA+TGG + chr1_4:59977654-59977673 Msa0174350:CDS 55.0%
TAGAGAGCCCGAGGAGAGTC+AGG + chr1_4:59975145-59975164 Msa0174350:intron 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG - chr1_4:59975473-59975492 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG - chr1_4:59975487-59975506 None:intergenic 60.0%
CCAACAGACCGCCCAACAAG+TGG - chr1_4:59975514-59975533 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG + chr1_4:59975511-59975530 Msa0174350:intron 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG - chr1_4:59976481-59976500 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG - chr1_4:59976490-59976509 None:intergenic 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG - chr1_4:59976491-59976510 None:intergenic 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG - chr1_4:59976492-59976511 None:intergenic 60.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG - chr1_4:59975479-59975498 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 59971825 59977756 59971825 ID=Msa0174350;Name=Msa0174350
chr1_4 mRNA 59971825 59977756 59971825 ID=Msa0174350-mRNA-1;Parent=Msa0174350;Name=Msa0174350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|7|0|1099
chr1_4 exon 59971825 59971863 59971825 ID=Msa0174350-mRNA-1:exon:18792;Parent=Msa0174350-mRNA-1
chr1_4 exon 59972040 59972276 59972040 ID=Msa0174350-mRNA-1:exon:18793;Parent=Msa0174350-mRNA-1
chr1_4 exon 59972549 59973214 59972549 ID=Msa0174350-mRNA-1:exon:18794;Parent=Msa0174350-mRNA-1
chr1_4 exon 59973885 59974290 59973885 ID=Msa0174350-mRNA-1:exon:18795;Parent=Msa0174350-mRNA-1
chr1_4 exon 59974469 59975037 59974469 ID=Msa0174350-mRNA-1:exon:18796;Parent=Msa0174350-mRNA-1
chr1_4 exon 59976260 59977435 59976260 ID=Msa0174350-mRNA-1:exon:18797;Parent=Msa0174350-mRNA-1
chr1_4 exon 59977550 59977756 59977550 ID=Msa0174350-mRNA-1:exon:18798;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59971825 59971863 59971825 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59972040 59972276 59972040 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59972549 59973214 59972549 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59973885 59974290 59973885 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59974469 59975037 59974469 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59976260 59977435 59976260 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
chr1_4 CDS 59977550 59977756 59977550 ID=Msa0174350-mRNA-1:cds;Parent=Msa0174350-mRNA-1
Gene Sequence

>Msa0174350

ATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGATCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGGTGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTATCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACTCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTTAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAGGCCAAATTGCAAAAATCCAAGACTAACCACAAGAGTGTTATGAAATCTTTGTCTTGGTTGTTTAGTAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTCGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAACCTAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAGTCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAAGTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>Msa0174350

MALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEGAVSCKDQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMVMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDSCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNHKSVMKSLSWLFSKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNEPRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKKFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM*