AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175600 MtrunA17_Chr1g0196001 91.045 67 6 0 1 67 794 860 3.83e-39 136
Msa0175600 MtrunA17_Chr1g0196011 89.552 67 7 0 1 67 626 692 1.56e-38 134
Msa0175600 MtrunA17_Chr1g0196031 91.045 67 6 0 1 67 834 900 1.63e-38 134
Msa0175600 MtrunA17_Chr5g0419221 65.714 70 21 1 1 67 796 865 3.60e-28 104
Msa0175600 MtrunA17_Chr5g0403401 67.143 70 20 1 1 67 785 854 3.31e-27 102
Msa0175600 MtrunA17_Chr5g0408511 67.143 70 20 1 1 67 793 862 4.47e-27 101
Msa0175600 MtrunA17_Chr5g0407891 65.714 70 21 1 1 67 115 184 9.34e-27 97.8
Msa0175600 MtrunA17_Chr5g0408621 64.286 70 22 1 1 67 831 900 1.06e-26 100
Msa0175600 MtrunA17_Chr3g0113221 61.429 70 24 1 1 67 787 856 2.29e-26 99.8
Msa0175600 MtrunA17_Chr5g0408801 64.286 70 22 1 1 67 797 866 2.81e-26 99.4
Msa0175600 MtrunA17_Chr5g0408581 64.286 70 22 1 1 67 797 866 2.95e-26 99.4
Msa0175600 MtrunA17_Chr5g0408741 65.714 70 21 1 1 67 701 770 3.13e-26 99.4
Msa0175600 MtrunA17_Chr5g0408611 62.857 70 23 1 1 67 784 853 4.49e-26 99.0
Msa0175600 MtrunA17_Chr5g0408821 65.714 70 21 1 1 67 190 259 4.73e-26 97.8
Msa0175600 MtrunA17_Chr5g0409241 65.714 70 21 1 1 67 477 546 7.62e-26 98.2
Msa0175600 MtrunA17_Chr5g0408811 64.286 70 22 1 1 67 772 841 8.36e-26 98.2
Msa0175600 MtrunA17_Chr5g0408431 64.286 70 22 1 1 67 795 864 8.61e-26 98.2
Msa0175600 MtrunA17_Chr5g0408571 65.714 70 21 1 1 67 275 344 1.55e-25 97.1
Msa0175600 MtrunA17_Chr5g0408421 62.857 70 23 1 1 67 778 847 8.56e-25 95.1
Msa0175600 MtrunA17_Chr6g0464171 65.714 70 21 1 1 67 797 866 1.86e-24 94.4
Msa0175600 MtrunA17_Chr2g0300201 65.714 70 21 1 1 67 797 866 1.98e-24 94.4
Msa0175600 MtrunA17_Chr6g0464141 62.857 70 23 1 1 67 797 866 4.65e-24 93.2
Msa0175600 MtrunA17_Chr6g0464161 64.286 70 22 1 1 67 526 595 5.30e-24 92.8
Msa0175600 MtrunA17_Chr6g0472051 63.380 71 23 1 1 68 1 71 6.96e-24 89.0
Msa0175600 MtrunA17_Chr7g0241921 64.179 67 23 1 1 67 771 836 7.28e-24 92.4
Msa0175600 MtrunA17_Chr6g0464211 64.286 70 22 1 1 67 796 865 1.04e-23 92.0
Msa0175600 MtrunA17_Chr5g0407241 61.429 70 24 1 1 67 802 871 1.06e-23 92.0
Msa0175600 MtrunA17_Chr8g0367351 57.971 69 27 1 1 67 793 861 5.20e-23 90.1
Msa0175600 MtrunA17_Chr5g0408401 55.714 70 28 1 1 67 561 630 9.11e-23 89.4
Msa0175600 MtrunA17_Chr8g0366461 54.286 70 29 1 1 67 791 860 7.21e-22 87.0
Msa0175600 MtrunA17_Chr8g0363221 58.209 67 25 1 1 67 656 719 5.83e-21 84.3
Msa0175600 MtrunA17_Chr8g0363601 56.716 67 26 1 1 67 571 634 1.17e-20 83.6
Msa0175600 MtrunA17_Chr8g0363061 56.716 67 26 1 1 67 777 840 1.19e-20 83.6
Msa0175600 MtrunA17_Chr8g0363331 55.882 68 27 1 1 68 53 117 1.31e-20 79.0
Msa0175600 MtrunA17_Chr2g0284191 58.209 67 25 1 1 67 640 703 1.39e-20 83.2
Msa0175600 MtrunA17_Chr8g0360851 58.209 67 25 1 1 67 805 868 1.49e-20 83.2
Msa0175600 MtrunA17_Chr8g0363241 56.716 67 26 1 1 67 539 602 1.84e-20 82.8
Msa0175600 MtrunA17_Chr8g0362841 56.716 67 26 1 1 67 623 686 1.97e-20 82.8
Msa0175600 MtrunA17_Chr8g0363121 56.716 67 26 1 1 67 581 644 2.11e-20 82.8
Msa0175600 MtrunA17_Chr0c09g0493531 58.209 67 25 1 1 67 649 712 2.19e-20 82.8
Msa0175600 MtrunA17_Chr8g0362431 56.716 67 26 1 1 67 579 642 3.02e-20 82.4
Msa0175600 MtrunA17_Chr8g0363281 56.716 67 26 1 1 67 554 617 3.89e-20 82.0
Msa0175600 MtrunA17_Chr8g0362941 56.716 67 26 1 1 67 537 600 3.92e-20 82.0
Msa0175600 MtrunA17_Chr8g0361231 55.224 67 27 1 1 67 873 936 5.04e-20 81.6
Msa0175600 MtrunA17_Chr8g0363691 55.224 67 27 1 1 67 1045 1108 5.20e-20 81.6
Msa0175600 MtrunA17_Chr1g0176301 56.716 67 26 1 1 67 536 599 5.36e-20 81.6
Msa0175600 MtrunA17_Chr8g0363401 56.716 67 26 1 1 67 586 649 5.42e-20 81.6
Msa0175600 MtrunA17_Chr8g0363661 56.716 67 26 1 1 67 634 697 6.66e-20 81.3
Msa0175600 MtrunA17_Chr3g0095201 56.716 67 26 1 1 67 785 848 6.74e-20 81.3
Msa0175600 MtrunA17_Chr8g0362981 55.224 67 27 1 1 67 537 600 7.84e-20 81.3
Msa0175600 MtrunA17_Chr8g0362871 56.716 67 26 1 1 67 571 634 8.24e-20 80.9
Msa0175600 MtrunA17_Chr2g0284121 58.209 67 25 1 1 67 1010 1073 9.42e-20 80.9
Msa0175600 MtrunA17_Chr8g0362931 55.224 67 27 1 1 67 966 1029 1.08e-19 80.9
Msa0175600 MtrunA17_Chr8g0362961 55.224 67 27 1 1 67 1021 1084 1.86e-19 80.1
Msa0175600 MtrunA17_Chr3g0127701 55.882 68 29 1 1 67 760 827 1.93e-19 80.1
Msa0175600 MtrunA17_Chr8g0362911 55.224 67 27 1 1 67 520 583 2.10e-19 79.7
Msa0175600 MtrunA17_Chr5g0436911 57.353 68 28 1 1 67 40 107 2.11e-19 78.6
Msa0175600 MtrunA17_Chr4g0013491 55.224 67 27 1 1 67 534 597 2.20e-19 79.7
Msa0175600 MtrunA17_Chr8g0363641 55.224 67 27 1 1 67 53 116 3.38e-19 77.8
Msa0175600 MtrunA17_Chr8g0363371 55.224 67 27 1 1 67 593 656 3.56e-19 79.3
Msa0175600 MtrunA17_Chr3g0127671 55.882 68 29 1 1 67 805 872 5.87e-19 78.6
Msa0175600 MtrunA17_Chr8g0363501 55.224 67 27 1 1 67 317 380 7.10e-19 78.2
Msa0175600 MtrunA17_Chr5g0437331 54.412 68 30 1 1 67 790 857 7.20e-19 78.6
Msa0175600 MtrunA17_Chr8g0363191 53.731 67 28 1 1 67 498 561 7.43e-19 78.2
Msa0175600 MtrunA17_Chr8g0380941 53.623 69 30 1 1 67 786 854 1.14e-18 77.8
Msa0175600 MtrunA17_Chr2g0333091 50.746 67 33 0 1 67 567 633 1.78e-18 77.4
Msa0175600 MtrunA17_Chr2g0284151 53.731 67 28 1 1 67 605 668 1.86e-18 77.0
Msa0175600 MtrunA17_Chr5g0436861 52.857 70 30 1 1 67 787 856 2.56e-18 76.6
Msa0175600 MtrunA17_Chr5g0436841 55.882 68 29 1 1 67 835 902 3.89e-18 76.3
Msa0175600 MtrunA17_Chr2g0314031 54.412 68 30 1 1 67 785 852 4.33e-18 76.3
Msa0175600 MtrunA17_Chr2g0314021 54.412 68 30 1 1 67 789 856 4.33e-18 76.3
Msa0175600 MtrunA17_Chr2g0314001 54.412 68 30 1 1 67 789 856 4.33e-18 76.3
Msa0175600 MtrunA17_Chr2g0318171 47.761 67 35 0 1 67 556 622 5.18e-18 75.9
Msa0175600 MtrunA17_Chr1g0159851 54.286 70 29 1 1 67 555 624 5.69e-18 75.9
Msa0175600 MtrunA17_Chr8g0363111 53.731 67 28 1 1 67 781 844 6.71e-18 75.5
Msa0175600 MtrunA17_Chr8g0380951 50.725 69 32 1 1 67 755 823 7.39e-18 75.5
Msa0175600 MtrunA17_Chr7g0248261 52.941 68 31 1 1 67 739 806 7.84e-18 75.5
Msa0175600 MtrunA17_Chr5g0436921 51.429 70 31 1 1 67 782 851 1.10e-17 75.1
Msa0175600 MtrunA17_Chr3g0078611 52.941 68 31 1 1 67 1 68 1.27e-17 69.3
Msa0175600 MtrunA17_Chr5g0436941 50.000 68 33 1 1 67 783 850 2.23e-17 74.3
Msa0175600 MtrunA17_Chr1g0159881 52.941 68 31 1 1 67 257 324 4.10e-17 73.2
Msa0175600 MtrunA17_Chr2g0334191 50.746 67 32 1 1 67 869 934 5.52e-17 73.2
Msa0175600 MtrunA17_Chr2g0314611 46.269 67 36 0 1 67 560 626 6.54e-17 72.8
Msa0175600 MtrunA17_Chr1g0159871 52.941 68 31 1 1 67 716 783 8.97e-17 72.4
Msa0175600 MtrunA17_Chr2g0318191 45.588 68 37 0 1 68 90 157 9.95e-17 70.1
Msa0175600 MtrunA17_Chr2g0317071 49.254 67 34 0 1 67 870 936 5.25e-16 70.1
Msa0175600 MtrunA17_Chr4g0018651 46.269 67 36 0 1 67 774 840 5.90e-16 70.1
Msa0175600 MtrunA17_Chr3g0137741 44.776 67 37 0 1 67 567 633 8.85e-16 69.7
Msa0175600 MtrunA17_Chr1g0149381 46.269 67 35 1 1 67 577 642 1.00e-15 69.3
Msa0175600 MtrunA17_Chr4g0051961 49.254 67 34 0 1 67 949 1015 1.44e-15 68.9
Msa0175600 MtrunA17_Chr6g0467281 50.000 68 33 1 1 67 562 629 1.69e-15 68.9
Msa0175600 MtrunA17_Chr4g0052921 43.662 71 36 1 1 67 1043 1113 3.17e-15 68.2
Msa0175600 MtrunA17_Chr2g0296591 44.118 68 37 1 1 67 1027 1094 5.02e-15 67.4
Msa0175600 MtrunA17_Chr1g0202201 44.776 67 37 0 1 67 420 486 5.20e-15 67.4
Msa0175600 MtrunA17_Chr7g0250381 46.269 67 35 1 1 67 850 915 6.02e-15 67.4
Msa0175600 MtrunA17_Chr2g0296601 44.118 68 37 1 1 67 1027 1094 6.40e-15 67.0
Msa0175600 MtrunA17_Chr4g0022431 45.455 66 36 0 2 67 632 697 6.74e-15 67.0
Msa0175600 MtrunA17_Chr6g0486961 42.667 75 35 1 1 67 754 828 6.96e-15 67.0
Msa0175600 MtrunA17_Chr7g0271451 47.761 67 35 0 1 67 271 337 7.10e-15 67.0
Msa0175600 MtrunA17_Chr6g0467301 48.529 68 34 1 1 67 567 634 9.03e-15 66.6
Msa0175600 MtrunA17_Chr2g0302631 46.269 67 36 0 1 67 260 326 9.15e-15 66.6
Msa0175600 MtrunA17_Chr3g0119041 47.761 67 34 1 1 67 417 482 1.11e-14 66.6
Msa0175600 MtrunA17_Chr7g0239361 49.206 63 31 1 1 63 434 495 1.23e-14 66.2
Msa0175600 MtrunA17_Chr7g0250471 46.269 67 35 1 1 67 848 913 1.26e-14 66.2
Msa0175600 MtrunA17_Chr4g0069251 44.776 67 37 0 1 67 255 321 1.55e-14 65.9
Msa0175600 MtrunA17_Chr1g0205561 44.776 67 36 1 1 67 275 340 2.00e-14 65.9
Msa0175600 MtrunA17_Chr5g0443121 43.284 67 38 0 1 67 259 325 2.90e-14 65.1
Msa0175600 MtrunA17_Chr8g0362391 49.254 67 22 2 1 67 132 186 3.44e-14 64.7
Msa0175600 MtrunA17_Chr1g0197051 52.941 68 29 2 1 67 883 948 3.70e-14 65.1
Msa0175600 MtrunA17_Chr8g0338531 43.284 67 38 0 1 67 532 598 4.83e-14 64.7
Msa0175600 MtrunA17_Chr5g0440211 46.875 64 33 1 1 64 768 830 5.80e-14 64.3
Msa0175600 MtrunA17_Chr5g0408491 57.692 52 21 1 13 64 8 58 6.08e-14 59.7
Msa0175600 MtrunA17_Chr3g0096351 43.284 67 38 0 1 67 257 323 6.84e-14 64.3
Msa0175600 MtrunA17_Chr5g0446651 46.269 67 36 0 1 67 435 501 7.77e-14 63.9
Msa0175600 MtrunA17_Chr1g0170201 44.776 67 32 1 1 67 435 496 8.56e-14 63.9
Msa0175600 MtrunA17_Chr5g0440221 47.619 63 32 1 1 63 769 830 9.06e-14 63.9
Msa0175600 MtrunA17_Chr5g0440221 49.206 63 31 1 1 63 1262 1323 1.55e-13 63.2
Msa0175600 MtrunA17_Chr7g0250351 44.776 67 36 1 1 67 642 707 9.78e-14 63.9
Msa0175600 MtrunA17_Chr3g0102451 46.154 65 33 1 1 63 400 464 1.16e-13 63.5
Msa0175600 MtrunA17_Chr8g0341151 47.761 67 33 1 1 67 636 700 1.49e-13 63.2
Msa0175600 MtrunA17_Chr5g0440191 49.206 63 31 1 1 63 839 900 1.54e-13 63.2
Msa0175600 MtrunA17_Chr2g0323941 41.538 65 38 0 3 67 570 634 1.61e-13 63.2
Msa0175600 MtrunA17_Chr5g0440231 47.619 63 32 1 1 63 733 794 2.13e-13 62.8
Msa0175600 MtrunA17_Chr8g0363261 71.053 38 11 0 30 67 207 244 2.17e-13 62.8
Msa0175600 MtrunA17_Chr2g0323301 43.284 67 38 0 1 67 570 636 2.20e-13 62.8
Msa0175600 MtrunA17_Chr3g0130431 40.299 67 40 0 1 67 421 487 2.37e-13 62.8
Msa0175600 MtrunA17_Chr4g0035464 47.761 67 33 1 1 67 762 826 2.61e-13 62.8
Msa0175600 MtrunA17_Chr8g0338471 46.269 67 34 1 1 67 599 663 2.65e-13 62.4
Msa0175600 MtrunA17_Chr8g0338501 46.269 67 34 1 1 67 630 694 2.86e-13 62.4
Msa0175600 MtrunA17_Chr8g0345561 44.776 67 37 0 1 67 885 951 2.88e-13 62.4
Msa0175600 MtrunA17_Chr5g0394381 44.776 67 34 1 1 67 570 633 4.57e-13 62.0
Msa0175600 MtrunA17_Chr4g0023071 43.284 67 35 1 1 67 571 634 4.71e-13 62.0
Msa0175600 MtrunA17_Chr3g0116591 47.761 67 35 0 1 67 426 492 4.91e-13 61.6
Msa0175600 MtrunA17_Chr8g0354281 50.794 63 30 1 1 63 412 473 5.36e-13 61.6
Msa0175600 MtrunA17_Chr4g0018701 44.286 70 36 2 1 67 797 866 5.93e-13 61.6
Msa0175600 MtrunA17_Chr1g0157861 41.791 67 38 1 1 67 510 575 6.30e-13 61.6
Msa0175600 MtrunA17_Chr4g0019371 43.284 67 37 1 1 67 749 814 6.85e-13 61.2
Msa0175600 MtrunA17_Chr8g0348661 41.791 67 36 1 1 67 561 624 7.10e-13 61.2
Msa0175600 MtrunA17_Chr8g0354421 50.794 63 30 1 1 63 440 501 7.20e-13 61.2
Msa0175600 MtrunA17_Chr5g0394021 50.794 63 28 1 1 63 400 459 7.85e-13 61.2
Msa0175600 MtrunA17_Chr1g0165901 46.269 67 35 1 1 67 1044 1109 7.97e-13 61.2
Msa0175600 MtrunA17_Chr3g0112111 43.284 67 36 1 1 67 426 490 8.33e-13 61.2
Msa0175600 MtrunA17_Chr3g0135921 47.761 67 34 1 1 67 402 467 8.90e-13 61.2
Msa0175600 MtrunA17_Chr2g0324171 43.284 67 37 1 1 67 421 486 8.93e-13 61.2
Msa0175600 MtrunA17_Chr1g0157931 41.791 67 38 1 1 67 348 413 9.90e-13 60.8
Msa0175600 MtrunA17_Chr7g0232211 42.188 64 36 1 4 67 887 949 1.02e-12 60.8
Msa0175600 MtrunA17_Chr4g0019041 43.284 67 37 1 1 67 754 819 1.04e-12 60.8
Msa0175600 MtrunA17_Chr1g0157881 41.791 67 38 1 1 67 541 606 1.13e-12 60.8
Msa0175600 MtrunA17_Chr1g0165211 44.776 67 36 1 1 67 976 1041 1.18e-12 60.8
Msa0175600 MtrunA17_Chr5g0409041 44.776 67 34 1 1 67 382 445 1.38e-12 60.5
Msa0175600 MtrunA17_Chr7g0232611 41.176 68 39 1 1 68 1 67 1.48e-12 58.9
Msa0175600 MtrunA17_Chr3g0078551 47.619 63 32 1 1 63 601 662 1.49e-12 60.5
Msa0175600 MtrunA17_Chr8g0340891 46.269 67 33 1 1 67 641 704 1.71e-12 60.1
Msa0175600 MtrunA17_Chr7g0220711 47.059 68 32 2 1 67 117 181 1.74e-12 60.1
Msa0175600 MtrunA17_Chr6g0487571 41.791 67 37 1 1 67 647 711 1.76e-12 60.1
Msa0175600 MtrunA17_Chr1g0181731 44.776 67 37 0 1 67 674 740 1.82e-12 60.1
Msa0175600 MtrunA17_Chr3g0140551 38.961 77 35 1 1 65 777 853 1.88e-12 60.1
Msa0175600 MtrunA17_Chr6g0487061 42.466 73 34 1 3 67 776 848 1.93e-12 60.1
Msa0175600 MtrunA17_Chr1g0158611 41.538 65 38 0 3 67 128 192 2.23e-12 59.7
Msa0175600 MtrunA17_Chr7g0237371 47.619 63 30 1 1 63 1 60 2.39e-12 57.4
Msa0175600 MtrunA17_Chr7g0219831 44.776 67 35 1 1 67 121 185 2.51e-12 59.7
Msa0175600 MtrunA17_Chr7g0237341 50.000 62 26 1 1 62 587 643 2.60e-12 59.7
Msa0175600 MtrunA17_Chr8g0341101 44.776 67 35 1 1 67 693 757 2.64e-12 59.7
Msa0175600 MtrunA17_Chr3g0078521 44.776 67 36 1 1 67 596 661 2.65e-12 59.7
Msa0175600 MtrunA17_Chr5g0420171 42.029 69 38 1 1 67 575 643 2.68e-12 59.7
Msa0175600 MtrunA17_Chr1g0202331 36.765 68 42 1 1 67 608 675 2.68e-12 59.7
Msa0175600 MtrunA17_Chr8g0354441 50.794 63 30 1 1 63 427 488 2.69e-12 59.7
Msa0175600 MtrunA17_Chr6g0484071 41.176 68 39 1 1 67 134 201 2.77e-12 59.7
Msa0175600 MtrunA17_Chr2g0285131 47.826 69 34 1 1 67 35 103 2.92e-12 58.5
Msa0175600 MtrunA17_Chr5g0420151 43.478 69 37 2 1 67 597 665 2.99e-12 59.7
Msa0175600 MtrunA17_Chr7g0239171 46.269 67 34 2 1 67 411 475 3.05e-12 59.7
Msa0175600 MtrunA17_Chr2g0311511 41.791 67 35 1 1 67 523 585 3.12e-12 59.7
Msa0175600 MtrunA17_Chr6g0487031 39.474 76 35 1 3 67 773 848 3.15e-12 59.7
Msa0175600 MtrunA17_Chr1g0190581 41.791 67 39 0 1 67 598 664 3.23e-12 59.3
Msa0175600 MtrunA17_Chr1g0160581 40.299 67 40 0 1 67 380 446 3.30e-12 59.3
Msa0175600 MtrunA17_Chr3g0084661 44.776 67 37 0 1 67 109 175 3.48e-12 59.3
Msa0175600 MtrunA17_Chr7g0219841 47.059 68 32 2 1 67 117 181 3.53e-12 59.3
Msa0175600 MtrunA17_Chr7g0239221 47.761 67 33 2 1 67 422 486 3.82e-12 59.3
Msa0175600 MtrunA17_Chr1g0158651 41.538 65 38 0 3 67 384 448 3.85e-12 59.3
Msa0175600 MtrunA17_Chr1g0165971 44.776 67 36 1 1 67 861 926 3.95e-12 59.3
Msa0175600 MtrunA17_Chr8g0352041 50.000 60 25 2 1 59 1 56 4.13e-12 56.2
Msa0175600 MtrunA17_Chr3g0091461 48.438 64 29 1 4 67 887 946 4.19e-12 59.3
Msa0175600 MtrunA17_Chr6g0484051 39.706 68 40 1 1 67 424 491 4.38e-12 58.9
Msa0175600 MtrunA17_Chr3g0140871 45.902 61 31 1 1 61 766 824 4.43e-12 58.9
Msa0175600 MtrunA17_Chr7g0263591 44.776 67 37 0 1 67 680 746 4.69e-12 58.9
Msa0175600 MtrunA17_Chr1g0165231 44.776 67 36 1 1 67 959 1024 4.90e-12 58.9
Msa0175600 MtrunA17_Chr1g0165301 44.776 67 36 1 1 67 959 1024 4.90e-12 58.9
Msa0175600 MtrunA17_Chr4g0063701 41.791 67 36 1 1 67 605 668 5.06e-12 58.9
Msa0175600 MtrunA17_Chr8g0354351 49.206 63 31 1 1 63 410 471 5.38e-12 58.9
Msa0175600 MtrunA17_Chr7g0239261 44.776 67 35 1 1 67 416 480 5.49e-12 58.9
Msa0175600 MtrunA17_Chr3g0078541 44.776 67 36 1 1 67 607 672 5.80e-12 58.9
Msa0175600 MtrunA17_Chr8g0340931 43.284 67 35 1 1 67 643 706 5.81e-12 58.9
Msa0175600 MtrunA17_Chr4g0044691 41.791 67 37 1 1 67 401 465 6.12e-12 58.5
Msa0175600 MtrunA17_Chr7g0231541 40.625 64 37 1 4 67 527 589 6.19e-12 58.5
Msa0175600 MtrunA17_Chr7g0232131 40.625 64 37 1 4 67 994 1056 6.20e-12 58.5
Msa0175600 MtrunA17_Chr7g0237351 48.387 62 29 1 1 62 588 646 6.27e-12 58.5
Msa0175600 MtrunA17_Chr7g0276571 40.000 65 39 0 3 67 496 560 6.31e-12 58.5
Msa0175600 MtrunA17_Chr1g0157911 40.299 67 39 1 1 67 474 539 6.31e-12 58.5
Msa0175600 MtrunA17_Chr5g0414561 46.032 63 32 1 1 63 423 483 6.49e-12 58.5
Msa0175600 MtrunA17_Chr4g0042401 46.032 63 33 1 1 63 580 641 6.52e-12 58.5
Msa0175600 MtrunA17_Chr8g0340911 43.284 67 35 1 1 67 643 706 6.53e-12 58.5
Msa0175600 MtrunA17_Chr7g0219671 44.776 67 35 1 1 67 609 673 6.53e-12 58.5
Msa0175600 MtrunA17_Chr1g0158301 44.776 67 36 1 1 67 469 534 6.63e-12 58.5
Msa0175600 MtrunA17_Chr1g0160761 40.323 62 37 0 1 62 410 471 7.07e-12 58.5
Msa0175600 MtrunA17_Chr1g0183231 35.821 67 43 0 1 67 782 848 7.08e-12 58.5
Msa0175600 MtrunA17_Chr8g0340881 43.284 67 36 1 1 67 647 711 7.13e-12 58.5
Msa0175600 MtrunA17_Chr7g0250401 41.791 67 38 1 1 67 388 453 7.41e-12 58.5
Msa0175600 MtrunA17_Chr3g0078531 49.206 63 31 1 1 63 604 665 7.48e-12 58.5
Msa0175600 MtrunA17_Chr7g0239321 44.776 67 35 2 1 67 417 481 7.66e-12 58.5
Msa0175600 MtrunA17_Chr7g0217041 49.231 65 32 1 1 65 604 667 8.01e-12 58.5
Msa0175600 MtrunA17_Chr1g0172951 44.776 67 35 2 1 67 420 484 8.11e-12 58.2
Msa0175600 MtrunA17_Chr8g0341111 43.284 67 36 1 1 67 556 620 8.65e-12 58.2
Msa0175600 MtrunA17_Chr4g0034931 44.615 65 36 0 3 67 218 282 8.99e-12 58.2
Msa0175600 MtrunA17_Chr8g0361441 46.032 63 33 1 1 63 583 644 9.36e-12 58.2
Msa0175600 MtrunA17_Chr7g0234561 48.387 62 29 1 1 62 528 586 9.71e-12 58.2
Msa0175600 MtrunA17_Chr7g0237391 48.387 62 29 1 1 62 587 645 1.01e-11 58.2
Msa0175600 MtrunA17_Chr1g0160681 38.806 67 41 0 1 67 140 206 1.02e-11 58.2
Msa0175600 MtrunA17_Chr1g0158541 43.284 67 37 1 1 67 471 536 1.03e-11 58.2
Msa0175600 MtrunA17_Chr8g0375511 44.928 69 36 1 1 67 916 984 1.04e-11 58.2
Msa0175600 MtrunA17_Chr7g0219871 41.791 67 37 1 1 67 119 183 1.05e-11 58.2
Msa0175600 MtrunA17_Chr1g0158291 40.299 67 40 0 1 67 129 195 1.12e-11 57.8
Msa0175600 MtrunA17_Chr8g0345471 40.000 65 39 0 3 67 491 555 1.13e-11 57.8
Msa0175600 MtrunA17_Chr1g0158441 38.806 67 40 1 1 67 104 169 1.14e-11 57.8
Msa0175600 MtrunA17_Chr4g0000081 39.344 61 37 0 3 63 486 546 1.17e-11 57.8
Msa0175600 MtrunA17_Chr8g0340951 43.284 67 35 1 1 67 119 182 1.21e-11 57.0
Msa0175600 MtrunA17_Chr1g0165221 41.791 67 38 1 1 67 933 998 1.22e-11 57.8
Msa0175600 MtrunA17_Chr7g0251001 39.130 69 40 1 1 67 134 202 1.25e-11 57.8
Msa0175600 MtrunA17_Chr7g0251061 39.130 69 40 1 1 67 423 491 1.30e-11 57.8
Msa0175600 MtrunA17_Chr2g0323341 44.776 67 36 1 1 67 484 549 1.33e-11 57.8
Msa0175600 MtrunA17_Chr2g0313911 41.176 68 40 0 1 68 148 215 1.33e-11 57.8
Msa0175600 MtrunA17_Chr1g0151041 43.284 67 37 1 1 67 699 764 1.34e-11 57.8
Msa0175600 MtrunA17_Chr5g0413511 46.154 65 33 1 3 67 137 199 1.41e-11 57.8
Msa0175600 MtrunA17_Chr7g0239371 44.444 63 33 1 1 63 416 476 1.42e-11 57.8
Msa0175600 MtrunA17_Chr7g0262141 35.821 67 43 0 1 67 791 857 1.43e-11 57.8
Msa0175600 MtrunA17_Chr7g0252301 40.299 67 38 1 1 67 931 995 1.46e-11 57.8
Msa0175600 MtrunA17_Chr4g0060011 46.154 65 34 1 4 68 394 457 1.48e-11 57.8
Msa0175600 MtrunA17_Chr1g0158771 37.313 67 42 0 1 67 364 430 1.60e-11 57.4
Msa0175600 MtrunA17_Chr7g0239181 41.791 67 37 1 1 67 428 492 1.63e-11 57.4
Msa0175600 MtrunA17_Chr3g0114851 40.299 67 37 1 1 67 598 661 1.67e-11 57.4
Msa0175600 MtrunA17_Chr4g0018801 40.000 70 39 1 1 67 568 637 1.70e-11 57.4
Msa0175600 MtrunA17_Chr2g0324931 43.284 67 36 1 1 67 770 834 1.74e-11 57.4
Msa0175600 MtrunA17_Chr8g0343941 46.377 69 35 1 1 67 35 103 1.77e-11 56.6
Msa0175600 MtrunA17_Chr2g0282831 44.776 67 35 1 1 67 746 810 1.77e-11 57.4
Msa0175600 MtrunA17_Chr5g0399561 40.299 67 36 1 1 67 591 653 1.82e-11 57.4
Msa0175600 MtrunA17_Chr1g0165921 46.429 56 30 0 12 67 718 773 1.86e-11 57.4
Msa0175600 MtrunA17_Chr4g0073641 46.377 69 36 1 1 68 746 814 1.86e-11 57.4
Msa0175600 MtrunA17_Chr7g0248881 38.806 67 40 1 1 67 431 496 1.94e-11 57.4
Msa0175600 MtrunA17_Chr7g0222251 38.462 65 40 0 3 67 120 184 1.95e-11 56.6
Msa0175600 MtrunA17_Chr1g0165261 46.154 65 34 1 4 68 401 464 2.01e-11 57.4
Msa0175600 MtrunA17_Chr8g0341011 43.284 67 36 1 1 67 646 710 2.05e-11 57.4
Msa0175600 MtrunA17_Chr7g0233881 38.806 67 40 1 1 67 749 814 2.12e-11 57.0
Msa0175600 MtrunA17_Chr1g0158481 38.806 67 40 1 1 67 1 66 2.14e-11 56.6
Msa0175600 MtrunA17_Chr7g0239191 44.776 67 35 2 1 67 451 515 2.14e-11 57.0
Msa0175600 MtrunA17_Chr8g0347661 43.284 67 36 1 1 67 648 712 2.17e-11 57.0
Msa0175600 MtrunA17_Chr3g0084491 43.284 67 37 1 1 67 583 648 2.21e-11 57.0
Msa0175600 MtrunA17_Chr6g0483981 38.235 68 41 1 1 67 343 410 2.32e-11 57.0
Msa0175600 MtrunA17_Chr6g0484021 38.235 68 41 1 1 67 382 449 2.33e-11 57.0
Msa0175600 MtrunA17_Chr2g0289161 40.000 65 39 0 3 67 500 564 2.34e-11 57.0
Msa0175600 MtrunA17_Chr2g0280701 40.299 67 39 1 1 67 577 642 2.37e-11 57.0
Msa0175600 MtrunA17_Chr1g0160721 38.710 62 38 0 1 62 426 487 2.40e-11 57.0
Msa0175600 MtrunA17_Chr1g0165891 42.647 68 38 1 1 68 476 542 2.40e-11 57.0
Msa0175600 MtrunA17_Chr7g0250491 45.000 60 32 1 1 60 865 923 2.46e-11 57.0
Msa0175600 MtrunA17_Chr7g0264291 40.000 70 40 1 1 68 23 92 2.55e-11 54.3
Msa0175600 MtrunA17_Chr1g0165981 42.857 56 32 0 12 67 409 464 2.58e-11 57.0
Msa0175600 MtrunA17_Chr1g0160711 40.323 62 37 0 1 62 403 464 2.59e-11 57.0
Msa0175600 MtrunA17_Chr3g0125281 39.683 63 38 0 1 63 483 545 2.85e-11 56.6
Msa0175600 MtrunA17_Chr7g0239211 48.387 62 30 2 1 62 420 479 2.89e-11 56.6
Msa0175600 MtrunA17_Chr3g0106201 46.774 62 28 1 1 62 585 641 2.91e-11 56.6
Msa0175600 MtrunA17_Chr7g0239331 42.857 63 34 1 1 63 418 478 2.92e-11 56.6
Msa0175600 MtrunA17_Chr2g0324471 38.806 67 40 1 1 67 445 510 2.93e-11 56.6
Msa0175600 MtrunA17_Chr6g0467701 36.923 65 41 0 3 67 111 175 2.95e-11 56.6
Msa0175600 MtrunA17_Chr5g0412171 38.806 67 40 1 1 67 536 601 3.02e-11 56.6
Msa0175600 MtrunA17_Chr8g0351221 40.580 69 36 2 1 67 162 227 3.04e-11 56.6
Msa0175600 MtrunA17_Chr5g0407721 45.588 68 36 1 1 67 440 507 3.07e-11 56.6
Msa0175600 MtrunA17_Chr5g0399591 40.299 67 36 1 1 67 588 650 3.08e-11 56.6
Msa0175600 MtrunA17_Chr4g0048951 46.269 67 34 1 1 67 194 258 3.13e-11 56.6
Msa0175600 MtrunA17_Chr5g0433941 43.284 67 35 1 1 67 446 509 3.29e-11 56.6
Msa0175600 MtrunA17_Chr7g0219781 43.284 67 36 1 1 67 612 676 3.34e-11 56.6
Msa0175600 MtrunA17_Chr4g0036991 41.270 63 36 1 1 62 389 451 3.37e-11 56.6
Msa0175600 MtrunA17_Chr1g0175411 41.667 72 37 2 1 67 407 478 3.38e-11 56.6
Msa0175600 MtrunA17_Chr7g0232631 43.284 67 37 1 1 67 799 864 3.42e-11 56.6
Msa0175600 MtrunA17_Chr2g0297911 41.791 67 36 1 1 67 152 215 3.51e-11 56.6
Msa0175600 MtrunA17_Chr1g0158201 37.313 67 42 0 1 67 487 553 3.60e-11 56.6
Msa0175600 MtrunA17_Chr7g0237331 46.774 62 28 1 1 62 588 644 3.64e-11 56.6
Msa0175600 MtrunA17_Chr7g0262521 41.538 65 38 0 3 67 425 489 3.71e-11 56.6
Msa0175600 MtrunA17_Chr6g0484031 36.765 68 42 1 1 67 279 346 3.77e-11 56.6
Msa0175600 MtrunA17_Chr2g0312651 44.776 67 36 1 1 67 887 952 3.81e-11 56.6
Msa0175600 MtrunA17_Chr1g0190411 34.328 67 44 0 1 67 788 854 3.96e-11 56.2
Msa0175600 MtrunA17_Chr6g0478111 39.189 74 34 1 5 67 796 869 4.00e-11 56.2
Msa0175600 MtrunA17_Chr8g0340071 43.284 67 37 1 1 67 579 644 4.02e-11 56.2
Msa0175600 MtrunA17_Chr7g0232471 41.176 68 39 1 1 68 196 262 4.10e-11 56.2
Msa0175600 MtrunA17_Chr6g0487011 41.667 72 34 1 4 67 11 82 4.15e-11 55.5
Msa0175600 MtrunA17_Chr4g0071221 40.299 67 40 0 1 67 616 682 4.27e-11 56.2
Msa0175600 MtrunA17_Chr3g0106211 45.161 62 29 1 1 62 596 652 4.43e-11 56.2
Msa0175600 MtrunA17_Chr1g0158341 41.935 62 35 1 1 62 104 164 4.45e-11 56.2
Msa0175600 MtrunA17_Chr7g0250431 44.643 56 31 0 13 68 4 59 4.56e-11 55.5
Msa0175600 MtrunA17_Chr7g0239311 44.776 67 35 2 1 67 418 482 4.61e-11 56.2
Msa0175600 MtrunA17_Chr5g0400701 46.269 67 34 1 1 67 785 849 4.63e-11 56.2
Msa0175600 MtrunA17_Chr8g0340971 43.284 67 35 1 1 67 166 229 4.66e-11 55.8
Msa0175600 MtrunA17_Chr8g0340871 41.791 67 37 1 1 67 652 716 4.66e-11 56.2
Msa0175600 MtrunA17_Chr1g0158321 36.923 65 41 0 3 67 111 175 4.98e-11 56.2
Msa0175600 MtrunA17_Chr7g0219611 44.776 67 35 1 1 67 591 655 4.99e-11 56.2
Msa0175600 MtrunA17_Chr7g0232441 39.726 73 35 2 1 67 398 467 4.99e-11 56.2
Msa0175600 MtrunA17_Chr3g0106151 45.161 62 29 1 1 62 580 636 5.03e-11 56.2
Msa0175600 MtrunA17_Chr5g0393981 42.623 61 34 1 3 63 475 534 5.06e-11 56.2
Msa0175600 MtrunA17_Chr1g0160731 37.313 67 42 0 1 67 372 438 5.09e-11 56.2
Msa0175600 MtrunA17_Chr2g0311551 40.299 67 36 1 1 67 814 876 5.16e-11 56.2
Msa0175600 MtrunA17_Chr3g0106191 45.161 62 29 1 1 62 501 557 5.21e-11 56.2
Msa0175600 MtrunA17_Chr2g0280681 47.619 63 32 1 1 63 578 639 5.61e-11 55.8
Msa0175600 MtrunA17_Chr6g0483851 38.235 68 41 1 1 67 486 553 5.69e-11 55.8
Msa0175600 MtrunA17_Chr3g0084431 43.284 67 37 1 1 67 571 636 5.77e-11 55.8
Msa0175600 MtrunA17_Chr5g0394001 45.902 61 32 1 3 63 408 467 5.90e-11 55.8
Msa0175600 MtrunA17_Chr2g0301301 35.821 67 43 0 1 67 341 407 6.04e-11 55.8
Msa0175600 MtrunA17_Chr1g0189871 41.791 67 37 1 1 67 880 944 6.10e-11 55.8
Msa0175600 MtrunA17_Chr5g0420181 40.299 67 38 1 1 67 576 640 6.11e-11 55.8
Msa0175600 MtrunA17_Chr7g0219721 43.284 67 36 1 1 67 609 673 6.13e-11 55.8
Msa0175600 MtrunA17_Chr1g0158051 37.879 66 41 0 2 67 380 445 6.19e-11 55.8
Msa0175600 MtrunA17_Chr3g0088341 38.806 67 39 1 3 67 355 421 6.24e-11 55.8
Msa0175600 MtrunA17_Chr1g0169841 41.791 67 36 1 1 67 891 954 6.47e-11 55.8
Msa0175600 MtrunA17_Chr1g0175451 41.667 72 37 2 1 67 404 475 6.58e-11 55.8
Msa0175600 MtrunA17_Chr3g0106121 49.153 59 25 1 4 62 593 646 6.68e-11 55.8
Msa0175600 MtrunA17_Chr2g0280191 44.444 63 31 2 1 62 771 830 6.71e-11 55.8
Msa0175600 MtrunA17_Chr3g0106221 45.161 62 29 1 1 62 601 657 6.95e-11 55.8
Msa0175600 MtrunA17_Chr7g0219651 41.791 67 37 1 1 67 1596 1660 6.98e-11 55.8
Msa0175600 MtrunA17_Chr7g0219571 43.284 67 36 1 1 67 611 675 7.03e-11 55.8
Msa0175600 MtrunA17_Chr4g0017251 38.235 68 41 1 1 67 752 819 7.04e-11 55.8
Msa0175600 MtrunA17_Chr4g0042421 44.444 63 34 1 1 63 581 642 7.40e-11 55.5
Msa0175600 MtrunA17_Chr1g0160561 38.710 62 38 0 1 62 421 482 7.47e-11 55.5
Msa0175600 MtrunA17_Chr1g0158091 37.313 67 41 1 1 67 147 212 7.51e-11 55.5
Msa0175600 MtrunA17_Chr6g0488761 43.284 67 37 1 1 67 559 624 7.74e-11 55.5
Msa0175600 MtrunA17_Chr1g0157951 38.806 67 40 1 1 67 256 321 7.76e-11 55.5
Msa0175600 MtrunA17_Chr6g0483811 36.765 68 42 1 1 67 134 201 7.83e-11 55.5
Msa0175600 MtrunA17_Chr1g0158131 39.062 64 38 1 1 64 279 341 8.15e-11 55.5
Msa0175600 MtrunA17_Chr1g0160771 37.313 67 42 0 1 67 376 442 8.29e-11 55.5
Msa0175600 MtrunA17_Chr1g0206421 46.032 63 33 1 1 63 305 366 8.51e-11 55.5
Msa0175600 MtrunA17_Chr6g0483791 36.765 68 42 1 1 67 445 512 8.65e-11 55.5
Msa0175600 MtrunA17_Chr7g0219691 43.284 67 36 1 1 67 609 673 8.72e-11 55.5
Msa0175600 MtrunA17_Chr8g0389011 42.647 68 38 1 1 67 571 638 8.87e-11 55.5
Msa0175600 MtrunA17_Chr4g0061081 41.791 67 37 1 1 67 603 667 8.89e-11 55.5
Msa0175600 MtrunA17_Chr3g0134321 45.161 62 29 1 1 62 479 535 8.92e-11 55.5
Msa0175600 MtrunA17_Chr4g0025961 44.776 67 35 1 1 67 604 668 8.98e-11 55.5
Msa0175600 MtrunA17_Chr4g0042381 46.032 63 33 1 1 63 530 591 9.12e-11 55.5
Msa0175600 MtrunA17_Chr4g0042391 46.032 63 33 1 1 63 530 591 9.12e-11 55.5
Msa0175600 MtrunA17_Chr5g0420161 40.299 67 38 1 1 67 352 416 9.21e-11 55.5
Msa0175600 MtrunA17_Chr8g0389031 42.647 68 38 1 1 67 335 402 9.23e-11 55.5
Msa0175600 MtrunA17_Chr7g0221431 40.000 60 36 0 1 60 216 275 9.34e-11 55.5
Msa0175600 MtrunA17_Chr8g0340081 43.284 67 37 1 1 67 583 648 9.79e-11 55.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175600 AT3G47090.1 58.333 72 25 2 1 67 783 854 6.94e-22 87.4
Msa0175600 AT3G47570.1 59.722 72 24 2 1 67 784 855 1.02e-21 87.0
Msa0175600 AT3G47580.1 54.167 72 28 1 1 67 785 856 1.08e-20 84.0
Msa0175600 AT3G47110.1 52.778 72 29 1 1 67 801 872 3.00e-19 79.7
Msa0175600 AT5G39390.1 48.611 72 32 1 1 67 291 362 1.05e-18 78.2
Msa0175600 AT5G20480.1 48.611 72 32 1 1 67 794 865 1.50e-18 77.8
Msa0175600 AT5G20480.2 48.611 72 32 1 1 67 794 865 1.50e-18 77.8
Msa0175600 AT5G44700.1 50.725 69 32 1 1 67 1027 1095 4.70e-18 76.6
Msa0175600 AT4G20140.1 47.887 71 33 1 1 67 1030 1100 4.60e-17 73.6
Msa0175600 AT1G17750.1 44.776 67 37 0 1 67 871 937 1.51e-16 72.0
Msa0175600 AT1G72300.1 50.746 67 33 0 1 67 879 945 4.68e-16 70.9
Msa0175600 AT4G32300.1 44.776 67 37 0 1 67 568 634 6.87e-16 70.5
Msa0175600 AT4G04960.2 48.438 64 33 0 1 64 425 488 1.11e-15 69.7
Msa0175600 AT4G04960.1 48.438 64 33 0 1 64 425 488 1.11e-15 69.7
Msa0175600 AT5G24080.2 40.299 67 40 0 1 67 606 672 4.35e-15 68.2
Msa0175600 AT2G42960.2 46.154 65 35 0 1 65 259 323 5.44e-15 67.4
Msa0175600 AT5G24080.3 40.299 67 40 0 1 67 479 545 7.20e-15 67.4
Msa0175600 AT5G24080.1 40.299 67 40 0 1 67 479 545 7.20e-15 67.4
Msa0175600 AT2G42960.3 44.776 67 37 0 1 67 259 325 7.59e-15 67.4
Msa0175600 AT2G42960.5 44.776 67 37 0 1 67 259 325 7.59e-15 67.4
Msa0175600 AT2G42960.4 44.776 67 37 0 1 67 259 325 7.59e-15 67.4
Msa0175600 AT2G42960.1 44.776 67 37 0 1 67 259 325 7.59e-15 67.4
Msa0175600 AT5G53890.1 46.269 67 36 0 1 67 830 896 1.08e-14 67.0
Msa0175600 AT1G09440.1 44.776 67 37 0 1 67 233 299 1.45e-14 66.6
Msa0175600 AT1G09440.2 44.776 67 37 0 1 67 233 299 1.45e-14 66.6
Msa0175600 AT3G59700.1 46.269 67 35 1 1 67 415 480 1.83e-14 66.2
Msa0175600 AT1G73080.1 41.791 67 39 0 1 67 904 970 2.04e-14 66.2
Msa0175600 AT5G06740.1 44.776 67 37 0 1 67 405 471 3.35e-14 65.5
Msa0175600 AT5G06740.2 44.776 67 37 0 1 67 417 483 3.35e-14 65.5
Msa0175600 AT4G03390.2 45.161 62 34 0 2 63 564 625 3.54e-14 65.5
Msa0175600 AT4G03390.1 45.161 62 34 0 2 63 564 625 3.54e-14 65.5
Msa0175600 AT3G59110.1 44.776 67 37 0 1 67 266 332 3.66e-14 65.5
Msa0175600 AT2G01950.1 50.725 69 32 1 1 67 914 982 4.09e-14 65.1
Msa0175600 AT2G02220.1 44.776 67 37 0 1 67 810 876 4.32e-14 65.1
Msa0175600 AT3G59730.1 48.571 70 32 2 1 67 412 480 4.77e-14 65.1
Msa0175600 AT1G80870.1 43.284 67 37 1 1 67 157 222 9.63e-14 64.3
Msa0175600 AT3G59750.1 49.231 65 32 1 3 67 382 445 1.01e-13 64.3
Msa0175600 AT1G56720.3 43.284 67 38 0 1 67 255 321 1.19e-13 63.9
Msa0175600 AT1G56720.1 43.284 67 38 0 1 67 255 321 1.19e-13 63.9
Msa0175600 AT1G56720.2 43.284 67 38 0 1 67 255 321 1.19e-13 63.9
Msa0175600 AT1G56720.4 43.284 67 38 0 1 67 255 321 1.19e-13 63.9
Msa0175600 AT5G18500.2 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G18500.5 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G18500.4 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G18500.1 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G18500.3 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G18500.6 45.902 61 33 0 1 61 242 302 1.46e-13 63.5
Msa0175600 AT5G60280.1 47.761 67 33 1 1 67 414 478 1.55e-13 63.5
Msa0175600 AT1G34300.1 44.776 67 36 1 1 67 559 624 1.66e-13 63.5
Msa0175600 AT3G53810.1 50.000 62 29 1 1 62 424 483 1.71e-13 63.5
Msa0175600 AT3G08870.1 47.059 68 35 1 1 67 444 511 1.78e-13 63.5
Msa0175600 AT3G08870.2 47.059 68 35 1 1 67 465 532 1.78e-13 63.5
Msa0175600 AT5G42120.1 41.667 72 37 1 1 67 445 516 2.61e-13 63.2
Msa0175600 AT4G02420.1 46.032 63 32 1 1 63 427 487 2.63e-13 62.8
Msa0175600 AT2G24130.2 46.269 67 36 0 1 67 753 819 2.68e-13 62.8
Msa0175600 AT2G24130.1 46.269 67 36 0 1 67 738 804 2.71e-13 62.8
Msa0175600 AT4G35030.4 51.786 56 27 0 4 59 183 238 3.36e-13 62.4
Msa0175600 AT4G35030.2 51.786 56 27 0 4 59 183 238 3.72e-13 62.4
Msa0175600 AT5G01550.1 48.438 64 32 1 1 63 457 520 4.51e-13 62.4
Msa0175600 AT5G59270.1 46.032 63 33 1 1 63 425 486 5.64e-13 62.0
Msa0175600 AT5G59270.3 46.032 63 33 1 1 63 428 489 5.64e-13 62.0
Msa0175600 AT5G59270.2 46.032 63 33 1 1 63 444 505 5.64e-13 62.0
Msa0175600 AT5G42440.1 47.619 63 32 1 5 67 161 222 5.82e-13 62.0
Msa0175600 AT4G35030.9 51.786 56 27 0 4 59 42 97 6.91e-13 61.6
Msa0175600 AT3G17420.1 43.284 67 38 0 1 67 230 296 7.52e-13 61.6
Msa0175600 AT4G35030.7 51.786 56 27 0 4 59 183 238 8.77e-13 61.6
Msa0175600 AT4G35030.3 51.786 56 27 0 4 59 183 238 8.77e-13 61.6
Msa0175600 AT4G35030.6 51.786 56 27 0 4 59 183 238 8.77e-13 61.6
Msa0175600 AT4G35030.5 51.786 56 27 0 4 59 183 238 8.77e-13 61.6
Msa0175600 AT5G13290.2 42.857 63 36 0 1 63 204 266 8.98e-13 61.2
Msa0175600 AT3G14350.2 43.077 65 37 0 3 67 462 526 9.28e-13 61.2
Msa0175600 AT3G14350.1 43.077 65 37 0 3 67 499 563 9.30e-13 61.2
Msa0175600 AT5G13290.3 43.548 62 35 0 1 62 179 240 9.48e-13 61.2
Msa0175600 AT5G59260.1 46.875 64 31 2 1 63 431 492 9.65e-13 61.2
Msa0175600 AT4G35030.8 46.154 65 35 0 3 67 182 246 1.02e-12 61.2
Msa0175600 AT4G35030.1 46.154 65 35 0 3 67 182 246 1.02e-12 61.2
Msa0175600 AT5G13290.1 42.857 63 36 0 1 63 179 241 1.02e-12 61.2
Msa0175600 AT2G43700.1 47.826 69 31 3 1 67 411 476 1.03e-12 61.2
Msa0175600 AT4G29180.3 43.284 67 36 1 1 67 653 717 1.17e-12 61.2
Msa0175600 AT4G29180.1 43.284 67 36 1 1 67 654 718 1.17e-12 61.2
Msa0175600 AT4G29180.2 43.284 67 36 1 1 67 656 720 1.17e-12 61.2
Msa0175600 AT1G21590.1 42.857 63 36 0 1 63 484 546 1.30e-12 60.8
Msa0175600 AT2G43700.3 47.826 69 31 3 1 67 387 452 1.33e-12 60.8
Msa0175600 AT2G43700.5 47.826 69 31 3 1 67 387 452 1.33e-12 60.8
Msa0175600 AT2G43700.2 47.826 69 31 3 1 67 387 452 1.33e-12 60.8
Msa0175600 AT2G43700.4 47.826 69 31 3 1 67 387 452 1.33e-12 60.8
Msa0175600 AT1G21590.2 42.857 63 36 0 1 63 444 506 1.46e-12 60.8
Msa0175600 AT5G62230.1 44.776 67 36 1 1 67 724 789 1.54e-12 60.8
Msa0175600 AT5G46330.2 46.269 67 34 1 1 67 949 1013 1.59e-12 60.8
Msa0175600 AT5G46330.1 46.269 67 34 1 1 67 949 1013 1.59e-12 60.8
Msa0175600 AT3G19300.1 44.776 67 35 1 1 67 402 466 1.62e-12 60.8
Msa0175600 AT2G37710.1 44.444 63 33 1 1 63 424 484 1.64e-12 60.8
Msa0175600 AT5G62230.2 44.776 67 36 1 1 67 676 741 1.82e-12 60.5
Msa0175600 AT4G28490.1 46.269 67 36 0 1 67 769 835 1.84e-12 60.5
Msa0175600 AT4G29050.1 44.444 63 33 1 1 63 421 481 1.86e-12 60.5
Msa0175600 AT4G29050.2 44.444 63 33 1 1 63 435 495 1.86e-12 60.5
Msa0175600 AT2G35620.3 43.284 67 35 1 1 67 380 443 2.25e-12 60.5
Msa0175600 AT2G35620.1 43.284 67 35 1 1 67 380 443 2.25e-12 60.5
Msa0175600 AT2G35620.2 43.284 67 35 1 1 67 380 443 2.25e-12 60.5
Msa0175600 AT2G35620.4 43.284 67 35 1 1 67 380 443 2.25e-12 60.5
Msa0175600 AT2G19130.1 44.118 68 37 1 1 67 568 635 2.53e-12 60.1
Msa0175600 AT5G55830.1 47.541 61 31 1 1 60 442 502 2.72e-12 60.1
Msa0175600 AT5G12000.1 44.776 67 36 1 1 67 495 560 3.18e-12 60.1
Msa0175600 AT4G29990.2 41.791 67 37 1 1 67 649 713 3.44e-12 59.7
Msa0175600 AT4G29990.1 41.791 67 37 1 1 67 649 713 3.46e-12 59.7
Msa0175600 AT1G35710.1 43.284 67 37 1 1 67 932 997 3.69e-12 59.7
Msa0175600 AT1G80640.2 46.269 67 35 1 1 67 226 291 3.71e-12 59.7
Msa0175600 AT1G80640.1 46.269 67 35 1 1 67 226 291 3.75e-12 59.7
Msa0175600 AT2G30940.2 43.860 57 32 0 4 60 246 302 3.80e-12 59.7
Msa0175600 AT2G30940.3 43.860 57 32 0 4 60 243 299 3.88e-12 59.7
Msa0175600 AT2G30940.1 43.860 57 32 0 4 60 246 302 3.88e-12 59.7
Msa0175600 AT1G53730.1 41.538 65 38 0 3 67 496 560 3.99e-12 59.7
Msa0175600 AT1G53730.2 41.538 65 38 0 3 67 496 560 3.99e-12 59.7
Msa0175600 AT4G00340.2 43.284 67 36 1 1 67 537 601 4.08e-12 59.7
Msa0175600 AT4G00340.1 43.284 67 36 1 1 67 558 622 4.08e-12 59.7
Msa0175600 AT3G13065.1 40.323 62 37 0 2 63 494 555 4.22e-12 59.7
Msa0175600 AT3G53380.1 44.776 67 34 1 1 67 453 516 4.27e-12 59.7
Msa0175600 AT5G03140.1 50.000 60 27 1 1 60 450 506 5.29e-12 59.3
Msa0175600 AT3G59740.1 48.571 70 32 2 1 67 410 478 5.60e-12 59.3
Msa0175600 AT3G45430.2 46.032 63 32 1 1 63 420 480 5.77e-12 59.3
Msa0175600 AT3G45430.3 46.032 63 32 1 1 63 420 480 5.77e-12 59.3
Msa0175600 AT3G45430.1 46.032 63 32 1 1 63 420 480 5.77e-12 59.3
Msa0175600 AT2G43690.2 41.538 65 37 1 1 65 376 439 5.87e-12 59.3
Msa0175600 AT2G43690.1 41.538 65 37 1 1 65 412 475 5.94e-12 59.3
Msa0175600 AT2G43690.3 41.538 65 37 1 1 65 412 475 5.94e-12 59.3
Msa0175600 AT2G26330.1 43.284 67 37 1 1 67 724 789 6.68e-12 58.9
Msa0175600 AT4G27290.1 46.154 65 34 1 3 67 543 606 7.04e-12 58.9
Msa0175600 AT4G27290.2 46.154 65 34 1 3 67 589 652 7.05e-12 58.9
Msa0175600 AT5G26150.1 46.269 67 35 1 1 67 498 563 7.52e-12 58.9
Msa0175600 AT5G26150.2 46.269 67 35 1 1 67 503 568 7.67e-12 58.9
Msa0175600 AT1G77280.2 41.935 62 36 0 1 62 479 540 8.39e-12 58.5
Msa0175600 AT1G77280.1 41.935 62 36 0 1 62 479 540 8.39e-12 58.5
Msa0175600 AT2G31880.1 44.776 67 37 0 1 67 439 505 8.94e-12 58.5
Msa0175600 AT5G62710.1 41.791 67 39 0 1 67 388 454 9.55e-12 58.5
Msa0175600 AT5G01560.1 45.312 64 34 1 1 63 440 503 1.01e-11 58.5
Msa0175600 AT5G61350.1 42.254 71 37 1 1 67 601 671 1.07e-11 58.5
Msa0175600 AT5G62710.2 41.791 67 39 0 1 67 354 420 1.36e-11 58.2
Msa0175600 AT4G22130.1 38.462 65 40 0 3 67 475 539 1.39e-11 58.2
Msa0175600 AT4G22130.2 38.462 65 40 0 3 67 334 398 1.44e-11 58.2
Msa0175600 AT1G75820.1 44.776 67 35 1 1 67 769 833 1.58e-11 57.8
Msa0175600 AT5G61480.1 42.647 68 38 1 1 67 801 868 1.85e-11 57.8
Msa0175600 AT1G11130.2 40.000 65 39 0 3 67 499 563 1.86e-11 57.8
Msa0175600 AT1G11130.1 40.000 65 39 0 3 67 577 641 1.87e-11 57.8
Msa0175600 AT1G31420.2 42.647 68 36 1 1 68 382 446 1.89e-11 57.8
Msa0175600 AT2G29220.1 43.077 65 35 1 3 67 431 493 1.90e-11 57.8
Msa0175600 AT1G11340.2 43.284 67 37 1 1 67 659 724 2.02e-11 57.8
Msa0175600 AT1G11340.3 43.284 67 37 1 1 67 659 724 2.04e-11 57.8
Msa0175600 AT1G11340.1 43.284 67 37 1 1 67 591 656 2.05e-11 57.8
Msa0175600 AT4G02410.1 46.667 60 30 1 1 60 432 489 2.40e-11 57.4
Msa0175600 AT5G60310.1 48.333 60 29 1 1 60 419 476 2.42e-11 57.4
Msa0175600 AT5G12000.2 44.776 67 36 1 1 67 410 475 2.72e-11 57.4
Msa0175600 AT5G65710.1 44.286 70 35 2 1 67 765 833 2.92e-11 57.0
Msa0175600 AT2G39360.1 41.791 67 38 1 1 67 563 628 3.11e-11 57.0
Msa0175600 AT5G63930.2 44.776 67 34 1 1 67 821 884 3.39e-11 57.0
Msa0175600 AT5G63930.1 44.776 67 34 1 1 67 885 948 3.39e-11 57.0
Msa0175600 AT3G51550.1 41.791 67 37 1 1 67 613 677 3.58e-11 57.0
Msa0175600 AT5G61560.2 44.444 72 35 1 1 67 500 571 3.75e-11 57.0
Msa0175600 AT5G61560.4 44.444 72 35 1 1 67 521 592 3.86e-11 57.0
Msa0175600 AT5G61560.3 44.444 72 35 1 1 67 521 592 3.86e-11 57.0
Msa0175600 AT1G17230.3 44.776 67 36 1 1 67 877 942 3.95e-11 56.6
Msa0175600 AT5G61560.5 44.444 72 35 1 1 67 502 573 4.13e-11 56.6
Msa0175600 AT5G61560.1 44.444 72 35 1 1 67 502 573 4.13e-11 56.6
Msa0175600 AT2G37050.1 44.776 67 37 0 1 67 679 745 4.44e-11 56.6
Msa0175600 AT2G37050.3 44.776 67 37 0 1 67 680 746 4.44e-11 56.6
Msa0175600 AT1G17230.1 44.776 67 36 1 1 67 877 942 4.50e-11 56.6
Msa0175600 AT1G66910.2 40.299 67 38 1 1 67 420 484 5.00e-11 56.6
Msa0175600 AT1G66910.1 40.299 67 38 1 1 67 423 487 5.00e-11 56.6
Msa0175600 AT4G05200.1 45.902 61 32 1 3 63 425 484 5.05e-11 56.6
Msa0175600 AT4G05200.2 45.902 61 32 1 3 63 443 502 5.06e-11 56.6
Msa0175600 AT2G16750.2 45.161 62 30 1 2 63 354 411 5.55e-11 56.2
Msa0175600 AT2G16750.1 45.161 62 30 1 2 63 354 411 5.55e-11 56.2
Msa0175600 AT1G17230.2 44.776 67 36 1 1 67 877 942 5.70e-11 56.2
Msa0175600 AT3G55550.1 41.791 67 38 1 1 67 423 488 7.33e-11 55.8
Msa0175600 AT1G70110.1 38.806 67 39 1 1 67 421 485 7.69e-11 55.8
Msa0175600 AT5G01540.1 45.312 64 34 1 1 63 443 506 8.65e-11 55.8
Msa0175600 AT5G59700.1 41.791 67 37 1 1 67 558 622 8.78e-11 55.8
Msa0175600 AT2G33170.2 38.806 67 39 1 1 67 904 968 9.11e-11 55.8
Msa0175600 AT2G33170.1 38.806 67 39 1 1 67 904 968 9.11e-11 55.8
Msa0175600 AT1G66920.3 40.299 67 38 1 1 67 357 421 9.40e-11 55.8
Msa0175600 AT1G66920.1 40.299 67 38 1 1 67 375 439 9.79e-11 55.8
Msa0175600 AT5G35370.1 42.623 61 33 1 1 61 591 649 9.89e-11 55.8
Msa0175600 AT1G49730.4 40.299 67 38 1 1 67 403 467 9.99e-11 55.5

Find 7 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAATCACAATGAACAAT+AGG 0.382214 1_4:-61624796 None:intergenic
AAAAGATTAGAAATTGTTAG+TGG 0.414376 1_4:+61624730 Msa0175600:CDS
CATGACAAATGGGAGCTTAG+AGG 0.426695 1_4:+61624660 None:intergenic
TCATCAAGAAGGACATTGCT+TGG 0.486149 1_4:-61624820 None:intergenic
CAAATGGGAGCTTAGAGGAA+TGG 0.572035 1_4:+61624665 Msa0175600:CDS
CAACCATGTCATCATCAAGA+AGG 0.604581 1_4:-61624831 None:intergenic
TGTCCTTCTTGATGATGACA+TGG 0.633742 1_4:+61624828 Msa0175600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATCTTCTTTATTTAACAT+TGG + chr1_4:61625314-61625333 Msa0175600:intron 15.0%
!! ATAAAATTAGTTGTATATGT+TGG - chr1_4:61625499-61625518 None:intergenic 15.0%
!!! TATTTTTTTGCTATTAGATT+AGG + chr1_4:61625532-61625551 Msa0175600:intron 15.0%
!!! TTAAAGTCTAAATTTTAAGA+TGG - chr1_4:61626415-61626434 None:intergenic 15.0%
!!! TTATCTTCTTTATTTAACAT+TGG + chr1_4:61625314-61625333 Msa0175600:intron 15.0%
!! ATAAAATTAGTTGTATATGT+TGG - chr1_4:61625499-61625518 None:intergenic 15.0%
!!! TATTTTTTTGCTATTAGATT+AGG + chr1_4:61625532-61625551 Msa0175600:intron 15.0%
!!! TTAAAGTCTAAATTTTAAGA+TGG - chr1_4:61626415-61626434 None:intergenic 15.0%
!! AAAAGATTAGAAATTGTTAG+TGG + chr1_4:61624730-61624749 Msa0175600:CDS 20.0%
!! CAATATAATTTCAAAAGCTT+TGG + chr1_4:61625400-61625419 Msa0175600:intron 20.0%
!! ATAGAATATGAAATTCTTCT+AGG - chr1_4:61625781-61625800 None:intergenic 20.0%
!! AACTTTCAGTTTAACAAATT+AGG - chr1_4:61626004-61626023 None:intergenic 20.0%
!!! ACACATAATTTTAAATGGTT+AGG - chr1_4:61626040-61626059 None:intergenic 20.0%
!!! CAGAAACACATAATTTTAAA+TGG - chr1_4:61626045-61626064 None:intergenic 20.0%
!!! CAAAGTCTATTTTATTAATG+CGG - chr1_4:61626389-61626408 None:intergenic 20.0%
!! AAAAGATTAGAAATTGTTAG+TGG + chr1_4:61624730-61624749 Msa0175600:CDS 20.0%
!! CAATATAATTTCAAAAGCTT+TGG + chr1_4:61625400-61625419 Msa0175600:intron 20.0%
!! ATAGAATATGAAATTCTTCT+AGG - chr1_4:61625781-61625800 None:intergenic 20.0%
!! AACTTTCAGTTTAACAAATT+AGG - chr1_4:61626004-61626023 None:intergenic 20.0%
!!! ACACATAATTTTAAATGGTT+AGG - chr1_4:61626040-61626059 None:intergenic 20.0%
!!! CAGAAACACATAATTTTAAA+TGG - chr1_4:61626045-61626064 None:intergenic 20.0%
!!! CAAAGTCTATTTTATTAATG+CGG - chr1_4:61626389-61626408 None:intergenic 20.0%
! TTCAAATCACAATGAACAAT+AGG - chr1_4:61624799-61624818 None:intergenic 25.0%
! AGTTTCAAACATTATATACC+TGG - chr1_4:61624964-61624983 None:intergenic 25.0%
!!! GAAATGATGAGTTTTGAATT+AGG + chr1_4:61625004-61625023 Msa0175600:intron 25.0%
!!! TTGATATTGATTCTTTCTCT+TGG - chr1_4:61625362-61625381 None:intergenic 25.0%
! AAGAGAAAGAATCAATATCA+AGG + chr1_4:61625361-61625380 Msa0175600:intron 25.0%
!! TTTTGCATGATTCAAGAAAT+GGG + chr1_4:61625571-61625590 Msa0175600:intron 25.0%
! ATGTAAAGAACATGCTATAT+GGG - chr1_4:61625969-61625988 None:intergenic 25.0%
!! CATAATTTTAAATGGTTAGG+AGG - chr1_4:61626037-61626056 None:intergenic 25.0%
! TTGTCCATACATTTATTTCA+CGG - chr1_4:61626331-61626350 None:intergenic 25.0%
! TTTAAATCTAGCTAAAACTC+AGG + chr1_4:61626430-61626449 Msa0175600:intron 25.0%
! TATATCAATGTTATGACTTC+CGG + chr1_4:61626572-61626591 Msa0175600:intron 25.0%
! ACTAAACAAATAGAATCTAC+CGG - chr1_4:61626594-61626613 None:intergenic 25.0%
! TGGTATTTCATTTGGTTAAT+AGG + chr1_4:61626788-61626807 Msa0175600:intron 25.0%
! TTCAAATCACAATGAACAAT+AGG - chr1_4:61624799-61624818 None:intergenic 25.0%
! AGTTTCAAACATTATATACC+TGG - chr1_4:61624964-61624983 None:intergenic 25.0%
!!! GAAATGATGAGTTTTGAATT+AGG + chr1_4:61625004-61625023 Msa0175600:intron 25.0%
!!! TTGATATTGATTCTTTCTCT+TGG - chr1_4:61625362-61625381 None:intergenic 25.0%
! AAGAGAAAGAATCAATATCA+AGG + chr1_4:61625361-61625380 Msa0175600:intron 25.0%
!! TTTTGCATGATTCAAGAAAT+GGG + chr1_4:61625571-61625590 Msa0175600:intron 25.0%
! ATGTAAAGAACATGCTATAT+GGG - chr1_4:61625969-61625988 None:intergenic 25.0%
!! CATAATTTTAAATGGTTAGG+AGG - chr1_4:61626037-61626056 None:intergenic 25.0%
! TTGTCCATACATTTATTTCA+CGG - chr1_4:61626331-61626350 None:intergenic 25.0%
! TTTAAATCTAGCTAAAACTC+AGG + chr1_4:61626430-61626449 Msa0175600:intron 25.0%
! TATATCAATGTTATGACTTC+CGG + chr1_4:61626572-61626591 Msa0175600:intron 25.0%
! ACTAAACAAATAGAATCTAC+CGG - chr1_4:61626594-61626613 None:intergenic 25.0%
! TGGTATTTCATTTGGTTAAT+AGG + chr1_4:61626788-61626807 Msa0175600:intron 25.0%
ATCAATTGTTGAAACAAGTC+TGG - chr1_4:61624881-61624900 None:intergenic 30.0%
! GACTTGTTTCAACAATTGAT+AGG + chr1_4:61624881-61624900 Msa0175600:intron 30.0%
AATAAACAAACCAGCTCAAT+GGG + chr1_4:61624910-61624929 Msa0175600:intron 30.0%
TTCAAACATTATATACCTGG+AGG - chr1_4:61624961-61624980 None:intergenic 30.0%
AACATGCATATTTCAGAGTA+TGG + chr1_4:61625041-61625060 Msa0175600:intron 30.0%
TCTTTAAACATTGCATCAGT+TGG - chr1_4:61625146-61625165 None:intergenic 30.0%
ACTGATGCAATGTTTAAAGA+TGG + chr1_4:61625146-61625165 Msa0175600:intron 30.0%
! TGCATTTCCAAATGACATTT+TGG + chr1_4:61625196-61625215 Msa0175600:intron 30.0%
ACAATCTCCAAAATGTCATT+TGG - chr1_4:61625206-61625225 None:intergenic 30.0%
AACCTCAGAAGAATATTTAG+AGG + chr1_4:61625457-61625476 Msa0175600:intron 30.0%
TACCTCTAAATATTCTTCTG+AGG - chr1_4:61625462-61625481 None:intergenic 30.0%
! TTGCTATTAGATTAGGTAGT+AGG + chr1_4:61625539-61625558 Msa0175600:intron 30.0%
TGCTATTAGATTAGGTAGTA+GGG + chr1_4:61625540-61625559 Msa0175600:intron 30.0%
! CTTTTGCATGATTCAAGAAA+TGG + chr1_4:61625570-61625589 Msa0175600:intron 30.0%
!!! AGTATTTTCTAGTTTGCCAA+AGG - chr1_4:61625617-61625636 None:intergenic 30.0%
AGTACTAGAACTGCTAAAAT+AGG - chr1_4:61625917-61625936 None:intergenic 30.0%
!! ATTTTAGCAGTTCTAGTACT+TGG + chr1_4:61625917-61625936 Msa0175600:intron 30.0%
CATGTAAAGAACATGCTATA+TGG - chr1_4:61625970-61625989 None:intergenic 30.0%
! TTTTAAATGGTTAGGAGGAA+AGG - chr1_4:61626032-61626051 None:intergenic 30.0%
ACACAAAAATTGAGGATGAT+TGG + chr1_4:61626198-61626217 Msa0175600:intron 30.0%
! TTTACCACTTCTCTATTTCT+AGG + chr1_4:61626246-61626265 Msa0175600:intron 30.0%
! CACTAATGTTACATGGATTA+TGG + chr1_4:61626283-61626302 Msa0175600:intron 30.0%
TGTCCATACATTTATTTCAC+GGG - chr1_4:61626330-61626349 None:intergenic 30.0%
! ATGTATGGACAATCTTTTTG+TGG + chr1_4:61626339-61626358 Msa0175600:intron 30.0%
TATGAACAGACAGAAAATGT+AGG - chr1_4:61626554-61626573 None:intergenic 30.0%
ATCAATTGTTGAAACAAGTC+TGG - chr1_4:61624881-61624900 None:intergenic 30.0%
! GACTTGTTTCAACAATTGAT+AGG + chr1_4:61624881-61624900 Msa0175600:intron 30.0%
AATAAACAAACCAGCTCAAT+GGG + chr1_4:61624910-61624929 Msa0175600:intron 30.0%
TTCAAACATTATATACCTGG+AGG - chr1_4:61624961-61624980 None:intergenic 30.0%
AACATGCATATTTCAGAGTA+TGG + chr1_4:61625041-61625060 Msa0175600:intron 30.0%
TCTTTAAACATTGCATCAGT+TGG - chr1_4:61625146-61625165 None:intergenic 30.0%
ACTGATGCAATGTTTAAAGA+TGG + chr1_4:61625146-61625165 Msa0175600:intron 30.0%
! TGCATTTCCAAATGACATTT+TGG + chr1_4:61625196-61625215 Msa0175600:intron 30.0%
ACAATCTCCAAAATGTCATT+TGG - chr1_4:61625206-61625225 None:intergenic 30.0%
AACCTCAGAAGAATATTTAG+AGG + chr1_4:61625457-61625476 Msa0175600:intron 30.0%
TACCTCTAAATATTCTTCTG+AGG - chr1_4:61625462-61625481 None:intergenic 30.0%
! TTGCTATTAGATTAGGTAGT+AGG + chr1_4:61625539-61625558 Msa0175600:intron 30.0%
TGCTATTAGATTAGGTAGTA+GGG + chr1_4:61625540-61625559 Msa0175600:intron 30.0%
! CTTTTGCATGATTCAAGAAA+TGG + chr1_4:61625570-61625589 Msa0175600:intron 30.0%
!!! AGTATTTTCTAGTTTGCCAA+AGG - chr1_4:61625617-61625636 None:intergenic 30.0%
AGTACTAGAACTGCTAAAAT+AGG - chr1_4:61625917-61625936 None:intergenic 30.0%
!! ATTTTAGCAGTTCTAGTACT+TGG + chr1_4:61625917-61625936 Msa0175600:intron 30.0%
CATGTAAAGAACATGCTATA+TGG - chr1_4:61625970-61625989 None:intergenic 30.0%
! TTTTAAATGGTTAGGAGGAA+AGG - chr1_4:61626032-61626051 None:intergenic 30.0%
ACACAAAAATTGAGGATGAT+TGG + chr1_4:61626198-61626217 Msa0175600:intron 30.0%
! TTTACCACTTCTCTATTTCT+AGG + chr1_4:61626246-61626265 Msa0175600:intron 30.0%
! CACTAATGTTACATGGATTA+TGG + chr1_4:61626283-61626302 Msa0175600:intron 30.0%
TGTCCATACATTTATTTCAC+GGG - chr1_4:61626330-61626349 None:intergenic 30.0%
! ATGTATGGACAATCTTTTTG+TGG + chr1_4:61626339-61626358 Msa0175600:intron 30.0%
TATGAACAGACAGAAAATGT+AGG - chr1_4:61626554-61626573 None:intergenic 30.0%
!! CATTGAGCTGGTTTGTTTAT+TGG - chr1_4:61624911-61624930 None:intergenic 35.0%
CAATAAACAAACCAGCTCAA+TGG + chr1_4:61624909-61624928 Msa0175600:intron 35.0%
GCATATTTCAGAGTATGGAA+TGG + chr1_4:61625046-61625065 Msa0175600:intron 35.0%
GATTCTCAATTGTCAACAGA+AGG + chr1_4:61625068-61625087 Msa0175600:intron 35.0%
!! TTCTTTTGGAGATGTTGACT+GGG + chr1_4:61625114-61625133 Msa0175600:intron 35.0%
! ATGCAATTTTCACGTAGTTG+TGG - chr1_4:61625181-61625200 None:intergenic 35.0%
ATTTGCATCCCAATGTTGAA+AGG + chr1_4:61625288-61625307 Msa0175600:intron 35.0%
GATAAGCACCTTTCAACATT+GGG - chr1_4:61625299-61625318 None:intergenic 35.0%
AGATAAGCACCTTTCAACAT+TGG - chr1_4:61625300-61625319 None:intergenic 35.0%
CATTGGATTATCTTGTTCAG+TGG + chr1_4:61625331-61625350 Msa0175600:intron 35.0%
! TCAAAAGCTTTGGCTGATTA+AGG + chr1_4:61625410-61625429 Msa0175600:intron 35.0%
! CAAAAGCTTTGGCTGATTAA+GGG + chr1_4:61625411-61625430 Msa0175600:intron 35.0%
TTGGCTGATTAAGGGATTAA+AGG + chr1_4:61625419-61625438 Msa0175600:intron 35.0%
GCTATTAGATTAGGTAGTAG+GGG + chr1_4:61625541-61625560 Msa0175600:intron 35.0%
CTATTAGATTAGGTAGTAGG+GGG + chr1_4:61625542-61625561 Msa0175600:intron 35.0%
TATTAGATTAGGTAGTAGGG+GGG + chr1_4:61625543-61625562 Msa0175600:intron 35.0%
TTGCCAAAGGTAGAGTTATA+GGG - chr1_4:61625604-61625623 None:intergenic 35.0%
TTTGCCAAAGGTAGAGTTAT+AGG - chr1_4:61625605-61625624 None:intergenic 35.0%
GATATGATAGACTGATCATG+AGG - chr1_4:61625863-61625882 None:intergenic 35.0%
GTCTATCATATCTGCTAGTA+AGG + chr1_4:61625871-61625890 Msa0175600:intron 35.0%
TAAAGAACATGCTATATGGG+TGG - chr1_4:61625966-61625985 None:intergenic 35.0%
! ATGTGTTTCTGACTTTCGTA+AGG + chr1_4:61626054-61626073 Msa0175600:intron 35.0%
TTTCTGACTTTCGTAAGGTA+TGG + chr1_4:61626059-61626078 Msa0175600:intron 35.0%
AAAGTCAGAAATGTGCAGAA+CGG - chr1_4:61626111-61626130 None:intergenic 35.0%
!! GATGTAGAAAAAGTTGGTGA+AGG - chr1_4:61626172-61626191 None:intergenic 35.0%
ATCCTGGATGTAGAAAAAGT+TGG - chr1_4:61626178-61626197 None:intergenic 35.0%
TCCAGGATACACAAAAATTG+AGG + chr1_4:61626190-61626209 Msa0175600:intron 35.0%
! TCCTCAATTTTTGTGTATCC+TGG - chr1_4:61626194-61626213 None:intergenic 35.0%
AATTGAGGATGATTGGCAAA+AGG + chr1_4:61626205-61626224 Msa0175600:intron 35.0%
ATTGAGGATGATTGGCAAAA+GGG + chr1_4:61626206-61626225 Msa0175600:intron 35.0%
CACAACACACTAATGTTACA+TGG + chr1_4:61626276-61626295 Msa0175600:intron 35.0%
GTTCCCGTGAAATAAATGTA+TGG + chr1_4:61626324-61626343 Msa0175600:intron 35.0%
AAAACTCAGGTTAGATCAAG+AGG + chr1_4:61626443-61626462 Msa0175600:intron 35.0%
AGATAGCAACGAAATTACTG+TGG - chr1_4:61626499-61626518 None:intergenic 35.0%
!! TTCTGTTTGTTGTATGCTTC+TGG + chr1_4:61626613-61626632 Msa0175600:intron 35.0%
TGGAGACAAATAAAGAGAAC+AGG - chr1_4:61626734-61626753 None:intergenic 35.0%
! GTTTTATGAGAGAGTAGTGT+TGG - chr1_4:61626754-61626773 None:intergenic 35.0%
GACTTGGATGGTATTTCATT+TGG + chr1_4:61626780-61626799 Msa0175600:intron 35.0%
!! CATTGAGCTGGTTTGTTTAT+TGG - chr1_4:61624911-61624930 None:intergenic 35.0%
CAATAAACAAACCAGCTCAA+TGG + chr1_4:61624909-61624928 Msa0175600:intron 35.0%
GCATATTTCAGAGTATGGAA+TGG + chr1_4:61625046-61625065 Msa0175600:intron 35.0%
GATTCTCAATTGTCAACAGA+AGG + chr1_4:61625068-61625087 Msa0175600:intron 35.0%
!! TTCTTTTGGAGATGTTGACT+GGG + chr1_4:61625114-61625133 Msa0175600:intron 35.0%
! ATGCAATTTTCACGTAGTTG+TGG - chr1_4:61625181-61625200 None:intergenic 35.0%
ATTTGCATCCCAATGTTGAA+AGG + chr1_4:61625288-61625307 Msa0175600:intron 35.0%
GATAAGCACCTTTCAACATT+GGG - chr1_4:61625299-61625318 None:intergenic 35.0%
AGATAAGCACCTTTCAACAT+TGG - chr1_4:61625300-61625319 None:intergenic 35.0%
CATTGGATTATCTTGTTCAG+TGG + chr1_4:61625331-61625350 Msa0175600:intron 35.0%
! TCAAAAGCTTTGGCTGATTA+AGG + chr1_4:61625410-61625429 Msa0175600:intron 35.0%
! CAAAAGCTTTGGCTGATTAA+GGG + chr1_4:61625411-61625430 Msa0175600:intron 35.0%
TTGGCTGATTAAGGGATTAA+AGG + chr1_4:61625419-61625438 Msa0175600:intron 35.0%
GCTATTAGATTAGGTAGTAG+GGG + chr1_4:61625541-61625560 Msa0175600:intron 35.0%
CTATTAGATTAGGTAGTAGG+GGG + chr1_4:61625542-61625561 Msa0175600:intron 35.0%
TATTAGATTAGGTAGTAGGG+GGG + chr1_4:61625543-61625562 Msa0175600:intron 35.0%
TTGCCAAAGGTAGAGTTATA+GGG - chr1_4:61625604-61625623 None:intergenic 35.0%
TTTGCCAAAGGTAGAGTTAT+AGG - chr1_4:61625605-61625624 None:intergenic 35.0%
GATATGATAGACTGATCATG+AGG - chr1_4:61625863-61625882 None:intergenic 35.0%
GTCTATCATATCTGCTAGTA+AGG + chr1_4:61625871-61625890 Msa0175600:intron 35.0%
TAAAGAACATGCTATATGGG+TGG - chr1_4:61625966-61625985 None:intergenic 35.0%
! ATGTGTTTCTGACTTTCGTA+AGG + chr1_4:61626054-61626073 Msa0175600:intron 35.0%
TTTCTGACTTTCGTAAGGTA+TGG + chr1_4:61626059-61626078 Msa0175600:intron 35.0%
AAAGTCAGAAATGTGCAGAA+CGG - chr1_4:61626111-61626130 None:intergenic 35.0%
!! GATGTAGAAAAAGTTGGTGA+AGG - chr1_4:61626172-61626191 None:intergenic 35.0%
ATCCTGGATGTAGAAAAAGT+TGG - chr1_4:61626178-61626197 None:intergenic 35.0%
TCCAGGATACACAAAAATTG+AGG + chr1_4:61626190-61626209 Msa0175600:intron 35.0%
! TCCTCAATTTTTGTGTATCC+TGG - chr1_4:61626194-61626213 None:intergenic 35.0%
AATTGAGGATGATTGGCAAA+AGG + chr1_4:61626205-61626224 Msa0175600:intron 35.0%
ATTGAGGATGATTGGCAAAA+GGG + chr1_4:61626206-61626225 Msa0175600:intron 35.0%
CACAACACACTAATGTTACA+TGG + chr1_4:61626276-61626295 Msa0175600:intron 35.0%
GTTCCCGTGAAATAAATGTA+TGG + chr1_4:61626324-61626343 Msa0175600:intron 35.0%
AAAACTCAGGTTAGATCAAG+AGG + chr1_4:61626443-61626462 Msa0175600:intron 35.0%
AGATAGCAACGAAATTACTG+TGG - chr1_4:61626499-61626518 None:intergenic 35.0%
!! TTCTGTTTGTTGTATGCTTC+TGG + chr1_4:61626613-61626632 Msa0175600:intron 35.0%
TGGAGACAAATAAAGAGAAC+AGG - chr1_4:61626734-61626753 None:intergenic 35.0%
! GTTTTATGAGAGAGTAGTGT+TGG - chr1_4:61626754-61626773 None:intergenic 35.0%
GACTTGGATGGTATTTCATT+TGG + chr1_4:61626780-61626799 Msa0175600:intron 35.0%
TCATCAAGAAGGACATTGCT+TGG - chr1_4:61624823-61624842 None:intergenic 40.0%
!! TGTCCTTCTTGATGATGACA+TGG + chr1_4:61624828-61624847 Msa0175600:CDS 40.0%
CAACCATGTCATCATCAAGA+AGG - chr1_4:61624834-61624853 None:intergenic 40.0%
! GTTGCTCATGTGAGTGATTT+TGG + chr1_4:61624850-61624869 Msa0175600:intron 40.0%
AACCAGCTCAATGGGAATAA+AGG + chr1_4:61624918-61624937 Msa0175600:intron 40.0%
ACCAGCTCAATGGGAATAAA+GGG + chr1_4:61624919-61624938 Msa0175600:intron 40.0%
ATGGGAATAAAGGGGACTAT+AGG + chr1_4:61624928-61624947 Msa0175600:intron 40.0%
ACTATAGGTTATACTCCTCC+AGG + chr1_4:61624943-61624962 Msa0175600:intron 40.0%
AAGGAGACATGTACAGCTTT+GGG + chr1_4:61625087-61625106 Msa0175600:intron 40.0%
!!! CAGCTTTGGGATTCTTCTTT+TGG + chr1_4:61625100-61625119 Msa0175600:intron 40.0%
!! CTTCTTTTGGAGATGTTGAC+TGG + chr1_4:61625113-61625132 Msa0175600:intron 40.0%
! CAATTTTCACGTAGTTGTGG+AGG - chr1_4:61625178-61625197 None:intergenic 40.0%
CAATATCAAGGAAGTCATCG+TGG + chr1_4:61625373-61625392 Msa0175600:intron 40.0%
ATATGTTGGCATGAGTAGCA+CGG - chr1_4:61625485-61625504 None:intergenic 40.0%
GAACCCTATAACTCTACCTT+TGG + chr1_4:61625598-61625617 Msa0175600:intron 40.0%
ATTCAGATAACACCCAAGTG+TGG + chr1_4:61625835-61625854 Msa0175600:intron 40.0%
AGTACTTGGATCACAGATTC+AGG + chr1_4:61625931-61625950 Msa0175600:intron 40.0%
TTGGTGAAGGCAATTGTCTA+AGG - chr1_4:61626159-61626178 None:intergenic 40.0%
!! CACCAACTTTTTCTACATCC+AGG + chr1_4:61626173-61626192 Msa0175600:intron 40.0%
CACTCCTAGAAATAGAGAAG+TGG - chr1_4:61626253-61626272 None:intergenic 40.0%
AGAGGTGAGGATTAAAGTCT+AGG + chr1_4:61626461-61626480 Msa0175600:intron 40.0%
GGATGATCAGAAGTAGTTGA+CGG - chr1_4:61626713-61626732 None:intergenic 40.0%
CACTACTCTCTCATAAAACC+TGG + chr1_4:61626755-61626774 Msa0175600:intron 40.0%
CTCATAAAACCTGGTAGACT+TGG + chr1_4:61626764-61626783 Msa0175600:intron 40.0%
TAAAACCTGGTAGACTTGGA+TGG + chr1_4:61626768-61626787 Msa0175600:intron 40.0%
AAATACCATCCAAGTCTACC+AGG - chr1_4:61626776-61626795 None:intergenic 40.0%
TCATCAAGAAGGACATTGCT+TGG - chr1_4:61624823-61624842 None:intergenic 40.0%
!! TGTCCTTCTTGATGATGACA+TGG + chr1_4:61624828-61624847 Msa0175600:CDS 40.0%
CAACCATGTCATCATCAAGA+AGG - chr1_4:61624834-61624853 None:intergenic 40.0%
! GTTGCTCATGTGAGTGATTT+TGG + chr1_4:61624850-61624869 Msa0175600:intron 40.0%
AACCAGCTCAATGGGAATAA+AGG + chr1_4:61624918-61624937 Msa0175600:intron 40.0%
ACCAGCTCAATGGGAATAAA+GGG + chr1_4:61624919-61624938 Msa0175600:intron 40.0%
ATGGGAATAAAGGGGACTAT+AGG + chr1_4:61624928-61624947 Msa0175600:intron 40.0%
ACTATAGGTTATACTCCTCC+AGG + chr1_4:61624943-61624962 Msa0175600:intron 40.0%
AAGGAGACATGTACAGCTTT+GGG + chr1_4:61625087-61625106 Msa0175600:intron 40.0%
!!! CAGCTTTGGGATTCTTCTTT+TGG + chr1_4:61625100-61625119 Msa0175600:intron 40.0%
!! CTTCTTTTGGAGATGTTGAC+TGG + chr1_4:61625113-61625132 Msa0175600:intron 40.0%
! CAATTTTCACGTAGTTGTGG+AGG - chr1_4:61625178-61625197 None:intergenic 40.0%
CAATATCAAGGAAGTCATCG+TGG + chr1_4:61625373-61625392 Msa0175600:intron 40.0%
ATATGTTGGCATGAGTAGCA+CGG - chr1_4:61625485-61625504 None:intergenic 40.0%
GAACCCTATAACTCTACCTT+TGG + chr1_4:61625598-61625617 Msa0175600:intron 40.0%
ATTCAGATAACACCCAAGTG+TGG + chr1_4:61625835-61625854 Msa0175600:intron 40.0%
AGTACTTGGATCACAGATTC+AGG + chr1_4:61625931-61625950 Msa0175600:intron 40.0%
TTGGTGAAGGCAATTGTCTA+AGG - chr1_4:61626159-61626178 None:intergenic 40.0%
!! CACCAACTTTTTCTACATCC+AGG + chr1_4:61626173-61626192 Msa0175600:intron 40.0%
CACTCCTAGAAATAGAGAAG+TGG - chr1_4:61626253-61626272 None:intergenic 40.0%
AGAGGTGAGGATTAAAGTCT+AGG + chr1_4:61626461-61626480 Msa0175600:intron 40.0%
GGATGATCAGAAGTAGTTGA+CGG - chr1_4:61626713-61626732 None:intergenic 40.0%
CACTACTCTCTCATAAAACC+TGG + chr1_4:61626755-61626774 Msa0175600:intron 40.0%
CTCATAAAACCTGGTAGACT+TGG + chr1_4:61626764-61626783 Msa0175600:intron 40.0%
TAAAACCTGGTAGACTTGGA+TGG + chr1_4:61626768-61626787 Msa0175600:intron 40.0%
AAATACCATCCAAGTCTACC+AGG - chr1_4:61626776-61626795 None:intergenic 40.0%
CAAATGGGAGCTTAGAGGAA+TGG + chr1_4:61624665-61624684 Msa0175600:CDS 45.0%
CCAGCTCAATGGGAATAAAG+GGG + chr1_4:61624920-61624939 Msa0175600:intron 45.0%
GAAGGAGACATGTACAGCTT+TGG + chr1_4:61625086-61625105 Msa0175600:intron 45.0%
TGATGCAACTCTCTTCTCAG+AGG + chr1_4:61625226-61625245 Msa0175600:intron 45.0%
CCTCTGTTGTAACTGCAAGA+AGG - chr1_4:61625259-61625278 None:intergenic 45.0%
CCTTCTTGCAGTTACAACAG+AGG + chr1_4:61625256-61625275 Msa0175600:intron 45.0%
GATCATGAGGATCCACACTT+GGG - chr1_4:61625850-61625869 None:intergenic 45.0%
TGATCATGAGGATCCACACT+TGG - chr1_4:61625851-61625870 None:intergenic 45.0%
TCAGGTTAGATCAAGAGGTG+AGG + chr1_4:61626448-61626467 Msa0175600:intron 45.0%
CAAATGGGAGCTTAGAGGAA+TGG + chr1_4:61624665-61624684 Msa0175600:CDS 45.0%
CCAGCTCAATGGGAATAAAG+GGG + chr1_4:61624920-61624939 Msa0175600:intron 45.0%
GAAGGAGACATGTACAGCTT+TGG + chr1_4:61625086-61625105 Msa0175600:intron 45.0%
TGATGCAACTCTCTTCTCAG+AGG + chr1_4:61625226-61625245 Msa0175600:intron 45.0%
CCTCTGTTGTAACTGCAAGA+AGG - chr1_4:61625259-61625278 None:intergenic 45.0%
CCTTCTTGCAGTTACAACAG+AGG + chr1_4:61625256-61625275 Msa0175600:intron 45.0%
GATCATGAGGATCCACACTT+GGG - chr1_4:61625850-61625869 None:intergenic 45.0%
TGATCATGAGGATCCACACT+TGG - chr1_4:61625851-61625870 None:intergenic 45.0%
TCAGGTTAGATCAAGAGGTG+AGG + chr1_4:61626448-61626467 Msa0175600:intron 45.0%
CCCCTTTATTCCCATTGAGC+TGG - chr1_4:61624923-61624942 None:intergenic 50.0%
TGATTGGCAAAAGGGTGAGC+TGG + chr1_4:61626214-61626233 Msa0175600:intron 50.0%
CAAAAGGGTGAGCTGGTTGA+TGG + chr1_4:61626221-61626240 Msa0175600:intron 50.0%
CCCCTTTATTCCCATTGAGC+TGG - chr1_4:61624923-61624942 None:intergenic 50.0%
TGATTGGCAAAAGGGTGAGC+TGG + chr1_4:61626214-61626233 Msa0175600:intron 50.0%
CAAAAGGGTGAGCTGGTTGA+TGG + chr1_4:61626221-61626240 Msa0175600:intron 50.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 61624661 61626818 61624661 ID=Msa0175600;Name=Msa0175600
chr1_4 mRNA 61624661 61626818 61624661 ID=Msa0175600-mRNA-1;Parent=Msa0175600;Name=Msa0175600-mRNA-1;_AED=0.49;_eAED=0.49;_QI=0|0|0|0.5|1|1|2|0|68
chr1_4 exon 61624661 61624858 61624661 ID=Msa0175600-mRNA-1:exon:19718;Parent=Msa0175600-mRNA-1
chr1_4 exon 61626810 61626818 61626810 ID=Msa0175600-mRNA-1:exon:19719;Parent=Msa0175600-mRNA-1
chr1_4 CDS 61624661 61624858 61624661 ID=Msa0175600-mRNA-1:cds;Parent=Msa0175600-mRNA-1
chr1_4 CDS 61626810 61626818 61626810 ID=Msa0175600-mRNA-1:cds;Parent=Msa0175600-mRNA-1
Gene Sequence

>Msa0175600

ATGACAAATGGGAGCTTAGAGGAATGGTTGCATCGAAATGAAGAACAACATAGAACACTGAAATTCGAAAAAAGATTAGAAATTGTTAGTGGAATTGCTTCTGCATTACACTATCTTCACTATGAATGCGAGAAGCCTATTGTTCATTGTGATTTGAAACCAAGCAATGTCCTTCTTGATGATGACATGGTTGCTCATGTAGAGTGA
Protein sequence

>Msa0175600

MTNGSLEEWLHRNEEQHRTLKFEKRLEIVSGIASALHYLHYECEKPIVHCDLKPSNVLLDDDMVAHVE*